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Genes within 1Mb (chr6:139301408:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 527899 sc-eQTL 9.51e-01 0.00665 0.109 0.863 B L1
ENSG00000051620 HEBP2 897877 sc-eQTL 8.66e-01 0.014 0.083 0.863 B L1
ENSG00000112406 HECA 166328 sc-eQTL 6.12e-01 0.0536 0.106 0.863 B L1
ENSG00000135597 REPS1 313147 sc-eQTL 7.26e-01 -0.0328 0.0934 0.863 B L1
ENSG00000146386 ABRACL 272663 sc-eQTL 3.95e-01 -0.0467 0.0548 0.863 B L1
ENSG00000164440 TXLNB 9410 sc-eQTL 7.21e-03 0.359 0.132 0.863 B L1
ENSG00000164442 CITED2 -73240 sc-eQTL 5.77e-01 0.0473 0.0847 0.863 B L1
ENSG00000226571 AL592429.2 30046 sc-eQTL 3.70e-01 0.0844 0.094 0.863 B L1
ENSG00000024862 CCDC28A 527899 sc-eQTL 5.59e-01 0.0693 0.118 0.863 CD4T L1
ENSG00000051620 HEBP2 897877 sc-eQTL 5.01e-01 -0.0535 0.0794 0.863 CD4T L1
ENSG00000112406 HECA 166328 sc-eQTL 8.65e-01 0.0168 0.0987 0.863 CD4T L1
ENSG00000135597 REPS1 313147 sc-eQTL 3.31e-01 0.0755 0.0774 0.863 CD4T L1
ENSG00000146386 ABRACL 272663 sc-eQTL 8.90e-01 0.00788 0.0569 0.863 CD4T L1
ENSG00000164442 CITED2 -73240 sc-eQTL 4.40e-01 0.0752 0.0971 0.863 CD4T L1
ENSG00000231329 AL031772.1 61755 sc-eQTL 7.21e-01 0.0343 0.0958 0.863 CD4T L1
ENSG00000024862 CCDC28A 527899 sc-eQTL 3.97e-01 0.11 0.13 0.863 CD8T L1
ENSG00000051620 HEBP2 897877 sc-eQTL 7.20e-01 -0.0306 0.0853 0.863 CD8T L1
ENSG00000112406 HECA 166328 sc-eQTL 7.54e-01 -0.0292 0.0933 0.863 CD8T L1
ENSG00000135597 REPS1 313147 sc-eQTL 2.86e-01 0.0936 0.0875 0.863 CD8T L1
ENSG00000146386 ABRACL 272663 sc-eQTL 6.24e-02 0.0928 0.0496 0.863 CD8T L1
ENSG00000164442 CITED2 -73240 sc-eQTL 9.29e-01 0.00844 0.0948 0.863 CD8T L1
ENSG00000231329 AL031772.1 61755 sc-eQTL 5.32e-01 -0.0721 0.115 0.863 CD8T L1
ENSG00000024862 CCDC28A 527899 sc-eQTL 8.28e-01 0.0277 0.128 0.86 DC L1
ENSG00000051620 HEBP2 897877 sc-eQTL 9.68e-02 -0.149 0.0893 0.86 DC L1
ENSG00000112406 HECA 166328 sc-eQTL 3.53e-01 -0.0978 0.105 0.86 DC L1
ENSG00000135540 NHSL1 608837 sc-eQTL 1.34e-01 -0.175 0.117 0.86 DC L1
ENSG00000135597 REPS1 313147 sc-eQTL 9.93e-01 -0.000913 0.104 0.86 DC L1
ENSG00000146386 ABRACL 272663 sc-eQTL 6.71e-02 0.185 0.101 0.86 DC L1
ENSG00000164442 CITED2 -73240 sc-eQTL 5.68e-01 -0.0688 0.12 0.86 DC L1
ENSG00000225177 AL590617.2 608860 sc-eQTL 4.54e-01 -0.0917 0.122 0.86 DC L1
ENSG00000024862 CCDC28A 527899 sc-eQTL 7.06e-01 0.0359 0.0952 0.863 Mono L1
ENSG00000051620 HEBP2 897877 sc-eQTL 3.24e-01 -0.065 0.0657 0.863 Mono L1
ENSG00000112406 HECA 166328 sc-eQTL 3.87e-01 -0.0752 0.0867 0.863 Mono L1
ENSG00000135540 NHSL1 608837 sc-eQTL 3.75e-01 -0.11 0.124 0.863 Mono L1
ENSG00000135597 REPS1 313147 sc-eQTL 1.02e-01 -0.119 0.0724 0.863 Mono L1
ENSG00000146386 ABRACL 272663 sc-eQTL 2.75e-03 0.281 0.0928 0.863 Mono L1
ENSG00000164442 CITED2 -73240 sc-eQTL 5.58e-01 -0.0588 0.1 0.863 Mono L1
ENSG00000225177 AL590617.2 608860 sc-eQTL 2.05e-01 -0.164 0.129 0.863 Mono L1
ENSG00000024862 CCDC28A 527899 sc-eQTL 1.66e-03 -0.363 0.114 0.863 NK L1
ENSG00000051620 HEBP2 897877 sc-eQTL 7.18e-01 -0.0372 0.103 0.863 NK L1
ENSG00000112406 HECA 166328 sc-eQTL 3.31e-01 -0.098 0.101 0.863 NK L1
ENSG00000135597 REPS1 313147 sc-eQTL 9.79e-01 -0.00251 0.0961 0.863 NK L1
ENSG00000146386 ABRACL 272663 sc-eQTL 2.09e-02 0.161 0.0692 0.863 NK L1
ENSG00000164442 CITED2 -73240 sc-eQTL 9.57e-01 0.00502 0.0932 0.863 NK L1
ENSG00000024862 CCDC28A 527899 sc-eQTL 8.37e-01 -0.0284 0.138 0.863 Other_T L1
ENSG00000051620 HEBP2 897877 sc-eQTL 8.08e-01 0.0217 0.0892 0.863 Other_T L1
ENSG00000112406 HECA 166328 sc-eQTL 3.28e-01 -0.0979 0.0998 0.863 Other_T L1
ENSG00000135597 REPS1 313147 sc-eQTL 1.18e-01 -0.168 0.107 0.863 Other_T L1
ENSG00000146386 ABRACL 272663 sc-eQTL 6.63e-01 0.0308 0.0704 0.863 Other_T L1
ENSG00000164442 CITED2 -73240 sc-eQTL 3.02e-01 0.0852 0.0823 0.863 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 527899 sc-eQTL 4.31e-01 0.125 0.158 0.862 B_Activated L2
ENSG00000051620 HEBP2 897877 sc-eQTL 3.28e-01 -0.136 0.138 0.862 B_Activated L2
ENSG00000112406 HECA 166328 sc-eQTL 1.21e-01 0.233 0.15 0.862 B_Activated L2
ENSG00000135597 REPS1 313147 sc-eQTL 7.45e-01 0.0514 0.158 0.862 B_Activated L2
ENSG00000146386 ABRACL 272663 sc-eQTL 5.13e-01 -0.0936 0.143 0.862 B_Activated L2
ENSG00000164440 TXLNB 9410 sc-eQTL 8.16e-02 0.212 0.121 0.862 B_Activated L2
ENSG00000164442 CITED2 -73240 sc-eQTL 6.17e-01 0.0771 0.154 0.862 B_Activated L2
ENSG00000226571 AL592429.2 30046 sc-eQTL 4.43e-01 0.118 0.153 0.862 B_Activated L2
ENSG00000024862 CCDC28A 527899 sc-eQTL 3.13e-01 -0.137 0.136 0.863 B_Intermediate L2
ENSG00000051620 HEBP2 897877 sc-eQTL 9.52e-01 0.00565 0.0942 0.863 B_Intermediate L2
ENSG00000112406 HECA 166328 sc-eQTL 6.75e-01 -0.0495 0.118 0.863 B_Intermediate L2
ENSG00000135597 REPS1 313147 sc-eQTL 9.16e-01 0.0135 0.127 0.863 B_Intermediate L2
ENSG00000146386 ABRACL 272663 sc-eQTL 3.76e-01 -0.0958 0.108 0.863 B_Intermediate L2
ENSG00000164440 TXLNB 9410 sc-eQTL 8.10e-01 0.0319 0.133 0.863 B_Intermediate L2
ENSG00000164442 CITED2 -73240 sc-eQTL 6.97e-01 -0.0475 0.122 0.863 B_Intermediate L2
ENSG00000226571 AL592429.2 30046 sc-eQTL 4.94e-01 -0.0905 0.132 0.863 B_Intermediate L2
ENSG00000024862 CCDC28A 527899 sc-eQTL 6.45e-01 0.0639 0.139 0.864 B_Memory L2
ENSG00000051620 HEBP2 897877 sc-eQTL 9.06e-01 -0.0123 0.104 0.864 B_Memory L2
ENSG00000112406 HECA 166328 sc-eQTL 8.74e-01 -0.019 0.12 0.864 B_Memory L2
ENSG00000135597 REPS1 313147 sc-eQTL 6.38e-02 0.24 0.129 0.864 B_Memory L2
ENSG00000146386 ABRACL 272663 sc-eQTL 9.18e-01 -0.0106 0.103 0.864 B_Memory L2
ENSG00000164440 TXLNB 9410 sc-eQTL 7.28e-01 -0.0456 0.131 0.864 B_Memory L2
ENSG00000164442 CITED2 -73240 sc-eQTL 2.93e-01 0.127 0.12 0.864 B_Memory L2
ENSG00000226571 AL592429.2 30046 sc-eQTL 3.91e-01 -0.127 0.148 0.864 B_Memory L2
ENSG00000024862 CCDC28A 527899 sc-eQTL 4.37e-01 0.1 0.129 0.863 B_Naive1 L2
ENSG00000051620 HEBP2 897877 sc-eQTL 4.85e-01 0.0635 0.0907 0.863 B_Naive1 L2
ENSG00000112406 HECA 166328 sc-eQTL 9.63e-01 -0.00518 0.113 0.863 B_Naive1 L2
ENSG00000135597 REPS1 313147 sc-eQTL 7.65e-01 -0.0312 0.104 0.863 B_Naive1 L2
ENSG00000146386 ABRACL 272663 sc-eQTL 3.33e-01 -0.0706 0.0728 0.863 B_Naive1 L2
ENSG00000164440 TXLNB 9410 sc-eQTL 8.32e-04 0.451 0.133 0.863 B_Naive1 L2
ENSG00000164442 CITED2 -73240 sc-eQTL 7.44e-01 0.0324 0.0993 0.863 B_Naive1 L2
ENSG00000226571 AL592429.2 30046 sc-eQTL 3.60e-02 0.272 0.129 0.863 B_Naive1 L2
ENSG00000024862 CCDC28A 527899 sc-eQTL 4.97e-01 -0.0859 0.126 0.863 B_Naive2 L2
ENSG00000051620 HEBP2 897877 sc-eQTL 8.46e-01 -0.0168 0.0865 0.863 B_Naive2 L2
ENSG00000112406 HECA 166328 sc-eQTL 4.68e-01 0.0865 0.119 0.863 B_Naive2 L2
ENSG00000135597 REPS1 313147 sc-eQTL 6.30e-01 -0.0548 0.114 0.863 B_Naive2 L2
ENSG00000146386 ABRACL 272663 sc-eQTL 1.06e-01 0.135 0.0832 0.863 B_Naive2 L2
ENSG00000164440 TXLNB 9410 sc-eQTL 9.47e-02 0.221 0.132 0.863 B_Naive2 L2
ENSG00000164442 CITED2 -73240 sc-eQTL 7.94e-01 -0.0353 0.135 0.863 B_Naive2 L2
ENSG00000226571 AL592429.2 30046 sc-eQTL 7.07e-01 0.0466 0.124 0.863 B_Naive2 L2
ENSG00000024862 CCDC28A 527899 sc-eQTL 7.34e-01 0.0443 0.13 0.866 CD4_CTL L2
ENSG00000051620 HEBP2 897877 sc-eQTL 9.38e-01 -0.00872 0.113 0.866 CD4_CTL L2
ENSG00000112406 HECA 166328 sc-eQTL 8.02e-01 0.0331 0.132 0.866 CD4_CTL L2
ENSG00000135597 REPS1 313147 sc-eQTL 3.77e-01 0.113 0.127 0.866 CD4_CTL L2
ENSG00000146386 ABRACL 272663 sc-eQTL 2.19e-01 -0.143 0.116 0.866 CD4_CTL L2
ENSG00000164442 CITED2 -73240 sc-eQTL 7.89e-01 0.0313 0.117 0.866 CD4_CTL L2
ENSG00000231329 AL031772.1 61755 sc-eQTL 1.63e-01 -0.168 0.12 0.866 CD4_CTL L2
ENSG00000024862 CCDC28A 527899 sc-eQTL 1.66e-01 0.173 0.124 0.863 CD4_Naive L2
ENSG00000051620 HEBP2 897877 sc-eQTL 2.37e-01 -0.0921 0.0776 0.863 CD4_Naive L2
ENSG00000112406 HECA 166328 sc-eQTL 9.53e-01 0.00578 0.0971 0.863 CD4_Naive L2
ENSG00000135597 REPS1 313147 sc-eQTL 5.64e-01 0.0497 0.086 0.863 CD4_Naive L2
ENSG00000146386 ABRACL 272663 sc-eQTL 3.73e-01 -0.0516 0.0579 0.863 CD4_Naive L2
ENSG00000164442 CITED2 -73240 sc-eQTL 4.36e-01 0.0766 0.0983 0.863 CD4_Naive L2
ENSG00000231329 AL031772.1 61755 sc-eQTL 8.59e-01 -0.0177 0.0995 0.863 CD4_Naive L2
ENSG00000024862 CCDC28A 527899 sc-eQTL 8.92e-01 -0.0167 0.122 0.863 CD4_TCM L2
ENSG00000051620 HEBP2 897877 sc-eQTL 9.38e-01 0.00711 0.091 0.863 CD4_TCM L2
ENSG00000112406 HECA 166328 sc-eQTL 7.73e-01 0.0283 0.0978 0.863 CD4_TCM L2
ENSG00000135597 REPS1 313147 sc-eQTL 1.28e-01 0.141 0.0922 0.863 CD4_TCM L2
ENSG00000146386 ABRACL 272663 sc-eQTL 7.73e-01 0.0206 0.0713 0.863 CD4_TCM L2
ENSG00000164442 CITED2 -73240 sc-eQTL 5.51e-01 0.0632 0.106 0.863 CD4_TCM L2
ENSG00000231329 AL031772.1 61755 sc-eQTL 5.88e-02 0.216 0.114 0.863 CD4_TCM L2
ENSG00000024862 CCDC28A 527899 sc-eQTL 6.10e-01 -0.0714 0.14 0.863 CD4_TEM L2
ENSG00000051620 HEBP2 897877 sc-eQTL 7.72e-01 -0.0276 0.0953 0.863 CD4_TEM L2
ENSG00000112406 HECA 166328 sc-eQTL 7.28e-01 -0.0379 0.109 0.863 CD4_TEM L2
ENSG00000135597 REPS1 313147 sc-eQTL 1.70e-02 -0.282 0.117 0.863 CD4_TEM L2
ENSG00000146386 ABRACL 272663 sc-eQTL 5.66e-01 0.0486 0.0845 0.863 CD4_TEM L2
ENSG00000164442 CITED2 -73240 sc-eQTL 6.63e-01 0.0484 0.111 0.863 CD4_TEM L2
ENSG00000231329 AL031772.1 61755 sc-eQTL 2.87e-01 -0.124 0.116 0.863 CD4_TEM L2
ENSG00000024862 CCDC28A 527899 sc-eQTL 9.60e-01 -0.00725 0.144 0.863 CD8_CTL L2
ENSG00000051620 HEBP2 897877 sc-eQTL 2.99e-02 -0.222 0.101 0.863 CD8_CTL L2
ENSG00000112406 HECA 166328 sc-eQTL 9.78e-01 0.00285 0.105 0.863 CD8_CTL L2
ENSG00000135597 REPS1 313147 sc-eQTL 1.90e-01 0.147 0.111 0.863 CD8_CTL L2
ENSG00000146386 ABRACL 272663 sc-eQTL 7.29e-04 0.302 0.0881 0.863 CD8_CTL L2
ENSG00000164442 CITED2 -73240 sc-eQTL 4.91e-01 -0.0727 0.105 0.863 CD8_CTL L2
ENSG00000231329 AL031772.1 61755 sc-eQTL 4.89e-01 -0.0875 0.126 0.863 CD8_CTL L2
ENSG00000024862 CCDC28A 527899 sc-eQTL 9.01e-02 0.228 0.134 0.863 CD8_Naive L2
ENSG00000051620 HEBP2 897877 sc-eQTL 7.30e-01 0.0299 0.0863 0.863 CD8_Naive L2
ENSG00000112406 HECA 166328 sc-eQTL 2.37e-01 -0.123 0.104 0.863 CD8_Naive L2
ENSG00000135597 REPS1 313147 sc-eQTL 7.08e-01 0.0392 0.105 0.863 CD8_Naive L2
ENSG00000146386 ABRACL 272663 sc-eQTL 8.83e-01 -0.00806 0.0549 0.863 CD8_Naive L2
ENSG00000164442 CITED2 -73240 sc-eQTL 5.78e-01 -0.0618 0.111 0.863 CD8_Naive L2
ENSG00000231329 AL031772.1 61755 sc-eQTL 8.76e-01 0.0198 0.127 0.863 CD8_Naive L2
ENSG00000024862 CCDC28A 527899 sc-eQTL 5.74e-03 0.422 0.151 0.866 CD8_TCM L2
ENSG00000051620 HEBP2 897877 sc-eQTL 4.75e-01 -0.0776 0.108 0.866 CD8_TCM L2
ENSG00000112406 HECA 166328 sc-eQTL 8.29e-01 0.0244 0.113 0.866 CD8_TCM L2
ENSG00000135597 REPS1 313147 sc-eQTL 6.29e-01 -0.0567 0.117 0.866 CD8_TCM L2
ENSG00000146386 ABRACL 272663 sc-eQTL 6.56e-01 0.0521 0.117 0.866 CD8_TCM L2
ENSG00000164442 CITED2 -73240 sc-eQTL 2.77e-01 0.131 0.12 0.866 CD8_TCM L2
ENSG00000231329 AL031772.1 61755 sc-eQTL 8.30e-02 -0.219 0.126 0.866 CD8_TCM L2
ENSG00000024862 CCDC28A 527899 sc-eQTL 7.86e-01 0.0375 0.138 0.863 CD8_TEM L2
ENSG00000051620 HEBP2 897877 sc-eQTL 8.19e-01 -0.0287 0.125 0.863 CD8_TEM L2
ENSG00000112406 HECA 166328 sc-eQTL 8.40e-01 -0.0261 0.129 0.863 CD8_TEM L2
ENSG00000135597 REPS1 313147 sc-eQTL 5.18e-01 0.0869 0.134 0.863 CD8_TEM L2
ENSG00000146386 ABRACL 272663 sc-eQTL 1.02e-01 0.169 0.103 0.863 CD8_TEM L2
ENSG00000164442 CITED2 -73240 sc-eQTL 7.06e-01 -0.0425 0.112 0.863 CD8_TEM L2
ENSG00000231329 AL031772.1 61755 sc-eQTL 2.72e-01 0.141 0.128 0.863 CD8_TEM L2
ENSG00000024862 CCDC28A 527899 sc-eQTL 9.11e-01 -0.0165 0.148 0.864 MAIT L2
ENSG00000051620 HEBP2 897877 sc-eQTL 9.67e-01 -0.00422 0.103 0.864 MAIT L2
ENSG00000112406 HECA 166328 sc-eQTL 9.18e-01 -0.0116 0.112 0.864 MAIT L2
ENSG00000135597 REPS1 313147 sc-eQTL 2.47e-01 -0.14 0.121 0.864 MAIT L2
ENSG00000146386 ABRACL 272663 sc-eQTL 3.43e-01 0.0843 0.0888 0.864 MAIT L2
ENSG00000164442 CITED2 -73240 sc-eQTL 8.42e-01 0.0209 0.105 0.864 MAIT L2
ENSG00000024862 CCDC28A 527899 sc-eQTL 2.42e-01 -0.16 0.136 0.86 NK_CD56bright L2
ENSG00000051620 HEBP2 897877 sc-eQTL 6.59e-01 -0.0514 0.116 0.86 NK_CD56bright L2
ENSG00000112406 HECA 166328 sc-eQTL 6.47e-01 -0.0569 0.124 0.86 NK_CD56bright L2
ENSG00000135597 REPS1 313147 sc-eQTL 1.50e-01 -0.166 0.115 0.86 NK_CD56bright L2
ENSG00000146386 ABRACL 272663 sc-eQTL 5.19e-02 0.206 0.106 0.86 NK_CD56bright L2
ENSG00000164442 CITED2 -73240 sc-eQTL 9.02e-01 -0.014 0.114 0.86 NK_CD56bright L2
ENSG00000024862 CCDC28A 527899 sc-eQTL 4.04e-02 -0.258 0.125 0.862 NK_CD56dim L2
ENSG00000051620 HEBP2 897877 sc-eQTL 9.32e-01 -0.00961 0.112 0.862 NK_CD56dim L2
ENSG00000112406 HECA 166328 sc-eQTL 2.64e-01 -0.121 0.108 0.862 NK_CD56dim L2
ENSG00000135597 REPS1 313147 sc-eQTL 8.34e-01 0.0216 0.103 0.862 NK_CD56dim L2
ENSG00000146386 ABRACL 272663 sc-eQTL 1.90e-03 0.214 0.0681 0.862 NK_CD56dim L2
ENSG00000164442 CITED2 -73240 sc-eQTL 8.83e-01 0.0138 0.093 0.862 NK_CD56dim L2
ENSG00000024862 CCDC28A 527899 sc-eQTL 2.00e-02 -0.338 0.144 0.865 NK_HLA L2
ENSG00000051620 HEBP2 897877 sc-eQTL 1.49e-01 -0.179 0.124 0.865 NK_HLA L2
ENSG00000112406 HECA 166328 sc-eQTL 1.33e-01 0.205 0.136 0.865 NK_HLA L2
ENSG00000135597 REPS1 313147 sc-eQTL 6.44e-01 0.0623 0.135 0.865 NK_HLA L2
ENSG00000146386 ABRACL 272663 sc-eQTL 4.07e-02 0.226 0.11 0.865 NK_HLA L2
ENSG00000164442 CITED2 -73240 sc-eQTL 5.85e-01 0.0647 0.118 0.865 NK_HLA L2
ENSG00000024862 CCDC28A 527899 sc-eQTL 1.45e-02 -0.317 0.128 0.862 NK_cytokine L2
ENSG00000051620 HEBP2 897877 sc-eQTL 3.36e-01 -0.108 0.112 0.862 NK_cytokine L2
ENSG00000112406 HECA 166328 sc-eQTL 3.73e-01 -0.1 0.112 0.862 NK_cytokine L2
ENSG00000135597 REPS1 313147 sc-eQTL 5.30e-01 -0.0727 0.116 0.862 NK_cytokine L2
ENSG00000146386 ABRACL 272663 sc-eQTL 4.05e-01 0.0621 0.0745 0.862 NK_cytokine L2
ENSG00000164442 CITED2 -73240 sc-eQTL 8.01e-01 0.0245 0.0974 0.862 NK_cytokine L2
ENSG00000024862 CCDC28A 527899 sc-eQTL 5.37e-01 -0.0949 0.153 0.859 PB L2
ENSG00000051620 HEBP2 897877 sc-eQTL 6.61e-01 0.06 0.136 0.859 PB L2
ENSG00000112406 HECA 166328 sc-eQTL 1.52e-01 -0.239 0.166 0.859 PB L2
ENSG00000135597 REPS1 313147 sc-eQTL 7.04e-01 0.0565 0.149 0.859 PB L2
ENSG00000146386 ABRACL 272663 sc-eQTL 3.65e-01 -0.0943 0.104 0.859 PB L2
ENSG00000164440 TXLNB 9410 sc-eQTL 7.37e-01 -0.0512 0.152 0.859 PB L2
ENSG00000164442 CITED2 -73240 sc-eQTL 4.38e-01 0.0888 0.114 0.859 PB L2
ENSG00000226571 AL592429.2 30046 sc-eQTL 7.38e-01 -0.0515 0.153 0.859 PB L2
ENSG00000024862 CCDC28A 527899 sc-eQTL 6.10e-01 0.0733 0.143 0.863 Pro_T L2
ENSG00000051620 HEBP2 897877 sc-eQTL 8.42e-01 0.0228 0.114 0.863 Pro_T L2
ENSG00000112406 HECA 166328 sc-eQTL 8.28e-01 -0.0245 0.113 0.863 Pro_T L2
ENSG00000135597 REPS1 313147 sc-eQTL 6.21e-01 0.0658 0.133 0.863 Pro_T L2
ENSG00000146386 ABRACL 272663 sc-eQTL 4.93e-01 -0.059 0.0857 0.863 Pro_T L2
ENSG00000164442 CITED2 -73240 sc-eQTL 1.40e-01 0.151 0.102 0.863 Pro_T L2
ENSG00000024862 CCDC28A 527899 sc-eQTL 3.48e-01 0.125 0.133 0.863 Treg L2
ENSG00000051620 HEBP2 897877 sc-eQTL 4.11e-01 -0.0746 0.0906 0.863 Treg L2
ENSG00000112406 HECA 166328 sc-eQTL 7.51e-01 0.0351 0.11 0.863 Treg L2
ENSG00000135597 REPS1 313147 sc-eQTL 3.01e-01 0.118 0.114 0.863 Treg L2
ENSG00000146386 ABRACL 272663 sc-eQTL 7.87e-02 0.171 0.0966 0.863 Treg L2
ENSG00000164442 CITED2 -73240 sc-eQTL 9.37e-01 -0.00855 0.109 0.863 Treg L2
ENSG00000231329 AL031772.1 61755 sc-eQTL 9.28e-01 -0.0113 0.124 0.863 Treg L2
ENSG00000024862 CCDC28A 527899 sc-eQTL 4.69e-01 -0.0974 0.134 0.859 cDC L2
ENSG00000051620 HEBP2 897877 sc-eQTL 1.74e-01 -0.131 0.0958 0.859 cDC L2
ENSG00000112406 HECA 166328 sc-eQTL 1.39e-01 -0.189 0.127 0.859 cDC L2
ENSG00000135540 NHSL1 608837 sc-eQTL 9.65e-02 -0.207 0.124 0.859 cDC L2
ENSG00000135597 REPS1 313147 sc-eQTL 4.62e-01 0.106 0.144 0.859 cDC L2
ENSG00000146386 ABRACL 272663 sc-eQTL 4.73e-01 0.0846 0.118 0.859 cDC L2
ENSG00000164442 CITED2 -73240 sc-eQTL 7.86e-01 0.034 0.125 0.859 cDC L2
ENSG00000225177 AL590617.2 608860 sc-eQTL 6.68e-01 -0.0593 0.138 0.859 cDC L2
ENSG00000024862 CCDC28A 527899 sc-eQTL 7.59e-01 0.0319 0.104 0.863 cMono_IL1B L2
ENSG00000051620 HEBP2 897877 sc-eQTL 4.71e-01 -0.0539 0.0746 0.863 cMono_IL1B L2
ENSG00000112406 HECA 166328 sc-eQTL 5.29e-01 -0.0541 0.0859 0.863 cMono_IL1B L2
ENSG00000135540 NHSL1 608837 sc-eQTL 9.05e-01 0.0149 0.125 0.863 cMono_IL1B L2
ENSG00000135597 REPS1 313147 sc-eQTL 1.01e-01 -0.183 0.111 0.863 cMono_IL1B L2
ENSG00000146386 ABRACL 272663 sc-eQTL 5.49e-02 0.18 0.0932 0.863 cMono_IL1B L2
ENSG00000164442 CITED2 -73240 sc-eQTL 2.55e-01 -0.112 0.098 0.863 cMono_IL1B L2
ENSG00000225177 AL590617.2 608860 sc-eQTL 2.29e-01 -0.158 0.131 0.863 cMono_IL1B L2
ENSG00000024862 CCDC28A 527899 sc-eQTL 2.38e-01 -0.14 0.119 0.863 cMono_S100A L2
ENSG00000051620 HEBP2 897877 sc-eQTL 5.32e-01 -0.0509 0.0813 0.863 cMono_S100A L2
ENSG00000112406 HECA 166328 sc-eQTL 2.47e-01 -0.116 0.1 0.863 cMono_S100A L2
ENSG00000135540 NHSL1 608837 sc-eQTL 5.04e-02 -0.248 0.126 0.863 cMono_S100A L2
ENSG00000135597 REPS1 313147 sc-eQTL 4.11e-01 0.0992 0.12 0.863 cMono_S100A L2
ENSG00000146386 ABRACL 272663 sc-eQTL 1.17e-01 0.164 0.104 0.863 cMono_S100A L2
ENSG00000164442 CITED2 -73240 sc-eQTL 7.78e-01 0.0293 0.104 0.863 cMono_S100A L2
ENSG00000225177 AL590617.2 608860 sc-eQTL 2.95e-01 -0.146 0.139 0.863 cMono_S100A L2
ENSG00000024862 CCDC28A 527899 sc-eQTL 4.02e-01 -0.148 0.176 0.873 gdT L2
ENSG00000051620 HEBP2 897877 sc-eQTL 8.41e-01 -0.0338 0.168 0.873 gdT L2
ENSG00000112406 HECA 166328 sc-eQTL 6.92e-01 -0.0664 0.167 0.873 gdT L2
ENSG00000135597 REPS1 313147 sc-eQTL 1.71e-01 -0.237 0.172 0.873 gdT L2
ENSG00000146386 ABRACL 272663 sc-eQTL 1.00e+00 -3.64e-05 0.13 0.873 gdT L2
ENSG00000164442 CITED2 -73240 sc-eQTL 9.29e-01 0.0134 0.15 0.873 gdT L2
ENSG00000024862 CCDC28A 527899 sc-eQTL 3.13e-01 0.143 0.141 0.864 intMono L2
ENSG00000051620 HEBP2 897877 sc-eQTL 8.70e-01 0.0155 0.0951 0.864 intMono L2
ENSG00000112406 HECA 166328 sc-eQTL 3.67e-01 -0.105 0.116 0.864 intMono L2
ENSG00000135540 NHSL1 608837 sc-eQTL 3.45e-01 0.121 0.128 0.864 intMono L2
ENSG00000135597 REPS1 313147 sc-eQTL 8.64e-01 -0.0228 0.132 0.864 intMono L2
ENSG00000146386 ABRACL 272663 sc-eQTL 4.48e-01 0.0918 0.121 0.864 intMono L2
ENSG00000164442 CITED2 -73240 sc-eQTL 2.77e-01 -0.128 0.117 0.864 intMono L2
ENSG00000225177 AL590617.2 608860 sc-eQTL 9.57e-01 -0.00771 0.144 0.864 intMono L2
ENSG00000024862 CCDC28A 527899 sc-eQTL 2.58e-02 0.291 0.13 0.86 ncMono L2
ENSG00000051620 HEBP2 897877 sc-eQTL 6.80e-01 0.0323 0.0783 0.86 ncMono L2
ENSG00000112406 HECA 166328 sc-eQTL 4.93e-01 -0.0824 0.12 0.86 ncMono L2
ENSG00000135540 NHSL1 608837 sc-eQTL 2.67e-01 -0.14 0.126 0.86 ncMono L2
ENSG00000135597 REPS1 313147 sc-eQTL 3.26e-01 -0.0934 0.0948 0.86 ncMono L2
ENSG00000146386 ABRACL 272663 sc-eQTL 9.13e-03 0.296 0.113 0.86 ncMono L2
ENSG00000164442 CITED2 -73240 sc-eQTL 4.28e-01 -0.077 0.097 0.86 ncMono L2
ENSG00000225177 AL590617.2 608860 sc-eQTL 9.03e-01 -0.0172 0.14 0.86 ncMono L2
ENSG00000024862 CCDC28A 527899 sc-eQTL 9.08e-01 0.0171 0.148 0.853 pDC L2
ENSG00000051620 HEBP2 897877 sc-eQTL 2.34e-02 -0.259 0.113 0.853 pDC L2
ENSG00000112406 HECA 166328 sc-eQTL 7.27e-01 -0.0437 0.125 0.853 pDC L2
ENSG00000135540 NHSL1 608837 sc-eQTL 5.36e-01 -0.071 0.114 0.853 pDC L2
ENSG00000135597 REPS1 313147 sc-eQTL 9.35e-01 -0.00954 0.116 0.853 pDC L2
ENSG00000146386 ABRACL 272663 sc-eQTL 1.28e-01 0.192 0.126 0.853 pDC L2
ENSG00000164442 CITED2 -73240 sc-eQTL 1.03e-01 -0.242 0.148 0.853 pDC L2
ENSG00000225177 AL590617.2 608860 sc-eQTL 8.04e-01 0.0285 0.115 0.853 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 527899 sc-eQTL 8.16e-01 -0.0308 0.132 0.863 B_Memory LOneK1K
ENSG00000051620 HEBP2 897877 sc-eQTL 7.64e-01 0.0275 0.0914 0.863 B_Memory LOneK1K
ENSG00000112406 HECA 166328 sc-eQTL 7.23e-01 0.0417 0.117 0.863 B_Memory LOneK1K
ENSG00000135597 REPS1 313147 sc-eQTL 3.08e-01 0.124 0.121 0.863 B_Memory LOneK1K
ENSG00000146386 ABRACL 272663 sc-eQTL 5.64e-01 -0.0487 0.0843 0.863 B_Memory LOneK1K
ENSG00000164440 TXLNB 9410 sc-eQTL 8.49e-01 0.0266 0.14 0.863 B_Memory LOneK1K
ENSG00000164442 CITED2 -73240 sc-eQTL 6.54e-01 0.0531 0.118 0.863 B_Memory LOneK1K
ENSG00000226571 AL592429.2 30046 sc-eQTL 8.02e-01 0.0346 0.138 0.863 B_Memory LOneK1K
ENSG00000024862 CCDC28A 527899 sc-eQTL 7.39e-01 0.0402 0.121 0.863 B_Naive LOneK1K
ENSG00000051620 HEBP2 897877 sc-eQTL 5.90e-01 0.0452 0.0836 0.863 B_Naive LOneK1K
ENSG00000112406 HECA 166328 sc-eQTL 6.55e-01 0.0505 0.113 0.863 B_Naive LOneK1K
ENSG00000135597 REPS1 313147 sc-eQTL 4.53e-01 -0.0722 0.0961 0.863 B_Naive LOneK1K
ENSG00000146386 ABRACL 272663 sc-eQTL 7.64e-01 -0.0203 0.0675 0.863 B_Naive LOneK1K
ENSG00000164440 TXLNB 9410 sc-eQTL 7.55e-04 0.47 0.138 0.863 B_Naive LOneK1K
ENSG00000164442 CITED2 -73240 sc-eQTL 8.42e-01 -0.0205 0.103 0.863 B_Naive LOneK1K
ENSG00000226571 AL592429.2 30046 sc-eQTL 6.24e-02 0.224 0.12 0.863 B_Naive LOneK1K
ENSG00000024862 CCDC28A 527899 sc-eQTL 8.12e-01 -0.0229 0.0962 0.863 CD14_Mono LOneK1K
ENSG00000051620 HEBP2 897877 sc-eQTL 3.02e-01 -0.0739 0.0715 0.863 CD14_Mono LOneK1K
ENSG00000112406 HECA 166328 sc-eQTL 3.37e-01 -0.0829 0.0861 0.863 CD14_Mono LOneK1K
ENSG00000135540 NHSL1 608837 sc-eQTL 2.76e-01 -0.137 0.126 0.863 CD14_Mono LOneK1K
ENSG00000135597 REPS1 313147 sc-eQTL 2.95e-01 -0.109 0.103 0.863 CD14_Mono LOneK1K
ENSG00000146386 ABRACL 272663 sc-eQTL 4.53e-02 0.184 0.0914 0.863 CD14_Mono LOneK1K
ENSG00000164442 CITED2 -73240 sc-eQTL 4.40e-01 -0.078 0.101 0.863 CD14_Mono LOneK1K
ENSG00000225177 AL590617.2 608860 sc-eQTL 1.31e-01 -0.204 0.135 0.863 CD14_Mono LOneK1K
ENSG00000024862 CCDC28A 527899 sc-eQTL 3.84e-02 0.267 0.128 0.862 CD16_Mono LOneK1K
ENSG00000051620 HEBP2 897877 sc-eQTL 8.35e-01 -0.0144 0.0692 0.862 CD16_Mono LOneK1K
ENSG00000112406 HECA 166328 sc-eQTL 1.04e-01 -0.179 0.11 0.862 CD16_Mono LOneK1K
ENSG00000135540 NHSL1 608837 sc-eQTL 9.31e-01 -0.0106 0.123 0.862 CD16_Mono LOneK1K
ENSG00000135597 REPS1 313147 sc-eQTL 8.31e-02 -0.132 0.076 0.862 CD16_Mono LOneK1K
ENSG00000146386 ABRACL 272663 sc-eQTL 6.57e-02 0.206 0.111 0.862 CD16_Mono LOneK1K
ENSG00000164442 CITED2 -73240 sc-eQTL 1.90e-01 -0.126 0.0961 0.862 CD16_Mono LOneK1K
ENSG00000225177 AL590617.2 608860 sc-eQTL 9.26e-01 -0.0126 0.136 0.862 CD16_Mono LOneK1K
ENSG00000024862 CCDC28A 527899 sc-eQTL 3.41e-03 -0.352 0.119 0.862 NK_CD56dim LOneK1K
ENSG00000051620 HEBP2 897877 sc-eQTL 5.52e-01 -0.0627 0.105 0.862 NK_CD56dim LOneK1K
ENSG00000112406 HECA 166328 sc-eQTL 5.30e-01 -0.0651 0.103 0.862 NK_CD56dim LOneK1K
ENSG00000135597 REPS1 313147 sc-eQTL 9.77e-01 0.00295 0.101 0.862 NK_CD56dim LOneK1K
ENSG00000146386 ABRACL 272663 sc-eQTL 3.75e-03 0.188 0.064 0.862 NK_CD56dim LOneK1K
ENSG00000164442 CITED2 -73240 sc-eQTL 9.96e-01 -0.000457 0.0944 0.862 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000226571 AL592429.2 30046 eQTL 3.30e-03 0.143 0.0486 0.0 0.0 0.126

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000226571 AL592429.2 30046 1.49e-05 1.3e-05 1.23e-06 6.54e-06 2.38e-06 5.83e-06 1.19e-05 1.86e-06 9.81e-06 5.11e-06 1.39e-05 6.11e-06 1.8e-05 3.63e-06 3.17e-06 6.51e-06 6.49e-06 8.54e-06 2.69e-06 2.68e-06 5.13e-06 1.06e-05 9.11e-06 3.3e-06 2.02e-05 4.28e-06 4.7e-06 3.29e-06 1.02e-05 9.7e-06 7e-06 5.87e-07 8.3e-07 2.86e-06 4.89e-06 2.28e-06 1.73e-06 1.83e-06 2.02e-06 1.02e-06 8.27e-07 1.57e-05 1.63e-06 1.61e-07 6.87e-07 1.49e-06 1.27e-06 6.66e-07 5.44e-07