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Genes within 1Mb (chr6:135402646:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000029363 BCLAF1 -887205 sc-eQTL 7.37e-01 -0.0547 0.163 0.056 B_Activated L2
ENSG00000112339 HBS1L 299590 sc-eQTL 3.70e-01 0.206 0.229 0.056 B_Activated L2
ENSG00000135541 AHI1 -95119 sc-eQTL 9.66e-01 0.00917 0.216 0.056 B_Activated L2
ENSG00000171408 PDE7B -449055 sc-eQTL 3.17e-02 -0.424 0.196 0.056 B_Activated L2
ENSG00000286313 AL360178.1 -478296 sc-eQTL 9.96e-01 0.00073 0.161 0.056 B_Activated L2
ENSG00000029363 BCLAF1 -887205 sc-eQTL 7.37e-01 -0.0579 0.172 0.05 CD4_CTL L2
ENSG00000112339 HBS1L 299590 sc-eQTL 6.77e-01 0.0927 0.223 0.05 CD4_CTL L2
ENSG00000118513 MYB 221338 sc-eQTL 8.04e-01 -0.0375 0.15 0.05 CD4_CTL L2
ENSG00000135541 AHI1 -95119 sc-eQTL 2.62e-01 0.234 0.208 0.05 CD4_CTL L2
ENSG00000286313 AL360178.1 -478296 sc-eQTL 2.63e-01 -0.196 0.175 0.05 CD4_CTL L2
ENSG00000029363 BCLAF1 -887205 sc-eQTL 2.04e-01 -0.225 0.176 0.05 CD8_TEM L2
ENSG00000112339 HBS1L 299590 sc-eQTL 3.11e-01 0.211 0.208 0.05 CD8_TEM L2
ENSG00000118513 MYB 221338 sc-eQTL 2.23e-01 0.202 0.165 0.05 CD8_TEM L2
ENSG00000135541 AHI1 -95119 sc-eQTL 4.64e-01 -0.16 0.218 0.05 CD8_TEM L2
ENSG00000029363 BCLAF1 -887205 sc-eQTL 3.60e-01 0.114 0.124 0.051 NK_CD56bright L2
ENSG00000112339 HBS1L 299590 sc-eQTL 9.43e-01 0.0144 0.2 0.051 NK_CD56bright L2
ENSG00000135541 AHI1 -95119 sc-eQTL 4.53e-01 -0.154 0.205 0.051 NK_CD56bright L2
ENSG00000029363 BCLAF1 -887205 sc-eQTL 8.02e-01 0.0357 0.143 0.05 NK_HLA L2
ENSG00000112339 HBS1L 299590 sc-eQTL 1.37e-01 -0.317 0.212 0.05 NK_HLA L2
ENSG00000135541 AHI1 -95119 sc-eQTL 7.86e-01 -0.0608 0.224 0.05 NK_HLA L2
ENSG00000029363 BCLAF1 -887205 sc-eQTL 4.85e-01 -0.15 0.215 0.056 PB L2
ENSG00000112339 HBS1L 299590 sc-eQTL 1.11e-01 0.322 0.2 0.056 PB L2
ENSG00000135541 AHI1 -95119 sc-eQTL 8.32e-01 -0.0579 0.272 0.056 PB L2
ENSG00000171408 PDE7B -449055 sc-eQTL 8.37e-01 0.0377 0.183 0.056 PB L2
ENSG00000286313 AL360178.1 -478296 sc-eQTL 7.39e-01 -0.0618 0.185 0.056 PB L2
ENSG00000029363 BCLAF1 -887205 sc-eQTL 5.09e-01 -0.114 0.173 0.05 Pro_T L2
ENSG00000112339 HBS1L 299590 sc-eQTL 4.96e-01 0.114 0.167 0.05 Pro_T L2
ENSG00000135541 AHI1 -95119 sc-eQTL 3.24e-01 -0.212 0.214 0.05 Pro_T L2
ENSG00000146410 MTFR2 -847689 sc-eQTL 2.24e-01 0.172 0.141 0.05 Pro_T L2
ENSG00000029363 BCLAF1 -887205 sc-eQTL 9.07e-01 0.0226 0.194 0.051 intMono L2
ENSG00000112339 HBS1L 299590 sc-eQTL 8.07e-01 0.0534 0.219 0.051 intMono L2
ENSG00000135541 AHI1 -95119 sc-eQTL 1.76e-02 0.497 0.208 0.051 intMono L2
ENSG00000171408 PDE7B -449055 sc-eQTL 1.42e-01 -0.282 0.191 0.051 intMono L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000118513 MYB 221338 eQTL 0.0715 0.119 0.0661 0.0011 0.0 0.0368
ENSG00000135541 AHI1 -95119 eQTL 0.0451 0.134 0.0668 0.0 0.0 0.0368

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina