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Genes within 1Mb (chr6:134476211:A:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 524041 sc-eQTL 8.80e-01 -0.0188 0.124 0.874 B L1
ENSG00000112339 HBS1L -626845 sc-eQTL 5.61e-01 -0.0442 0.076 0.874 B L1
ENSG00000118515 SGK1 158099 sc-eQTL 4.89e-01 -0.0601 0.0866 0.874 B L1
ENSG00000028839 TBPL1 524041 sc-eQTL 1.40e-01 -0.135 0.0915 0.874 CD4T L1
ENSG00000112339 HBS1L -626845 sc-eQTL 5.51e-01 0.0398 0.0666 0.874 CD4T L1
ENSG00000118513 MYB -705097 sc-eQTL 3.34e-01 0.0713 0.0736 0.874 CD4T L1
ENSG00000118515 SGK1 158099 sc-eQTL 1.47e-01 -0.11 0.0753 0.874 CD4T L1
ENSG00000028839 TBPL1 524041 sc-eQTL 1.30e-01 -0.136 0.0895 0.874 CD8T L1
ENSG00000112339 HBS1L -626845 sc-eQTL 6.29e-01 0.0375 0.0776 0.874 CD8T L1
ENSG00000118513 MYB -705097 sc-eQTL 2.64e-01 0.096 0.0857 0.874 CD8T L1
ENSG00000118515 SGK1 158099 sc-eQTL 2.76e-01 -0.0629 0.0576 0.874 CD8T L1
ENSG00000028839 TBPL1 524041 sc-eQTL 3.72e-01 0.122 0.137 0.872 DC L1
ENSG00000112339 HBS1L -626845 sc-eQTL 5.52e-01 -0.0712 0.12 0.872 DC L1
ENSG00000118513 MYB -705097 sc-eQTL 2.36e-01 0.103 0.0867 0.872 DC L1
ENSG00000118515 SGK1 158099 sc-eQTL 1.66e-02 0.189 0.0783 0.872 DC L1
ENSG00000286887 AL355881.1 179910 sc-eQTL 3.75e-01 -0.109 0.123 0.872 DC L1
ENSG00000028839 TBPL1 524041 sc-eQTL 5.32e-01 0.0597 0.0953 0.874 Mono L1
ENSG00000112339 HBS1L -626845 sc-eQTL 3.55e-01 -0.0875 0.0944 0.874 Mono L1
ENSG00000118515 SGK1 158099 sc-eQTL 4.14e-01 -0.0575 0.0703 0.874 Mono L1
ENSG00000286887 AL355881.1 179910 sc-eQTL 6.56e-01 -0.0433 0.0969 0.874 Mono L1
ENSG00000028839 TBPL1 524041 sc-eQTL 4.07e-01 -0.0877 0.105 0.876 NK L1
ENSG00000112339 HBS1L -626845 sc-eQTL 4.94e-01 -0.0592 0.0865 0.876 NK L1
ENSG00000118515 SGK1 158099 sc-eQTL 6.51e-01 0.0422 0.093 0.876 NK L1
ENSG00000028839 TBPL1 524041 sc-eQTL 7.89e-01 -0.0332 0.124 0.874 Other_T L1
ENSG00000112339 HBS1L -626845 sc-eQTL 6.02e-01 0.0428 0.0819 0.874 Other_T L1
ENSG00000118515 SGK1 158099 sc-eQTL 5.29e-01 -0.0542 0.0859 0.874 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 524041 sc-eQTL 9.36e-01 0.0127 0.158 0.885 B_Activated L2
ENSG00000112339 HBS1L -626845 sc-eQTL 5.62e-01 0.0952 0.164 0.885 B_Activated L2
ENSG00000118515 SGK1 158099 sc-eQTL 3.57e-01 -0.126 0.137 0.885 B_Activated L2
ENSG00000028839 TBPL1 524041 sc-eQTL 2.64e-01 0.152 0.136 0.873 B_Intermediate L2
ENSG00000112339 HBS1L -626845 sc-eQTL 7.19e-01 0.0434 0.121 0.873 B_Intermediate L2
ENSG00000118515 SGK1 158099 sc-eQTL 1.12e-01 -0.198 0.124 0.873 B_Intermediate L2
ENSG00000028839 TBPL1 524041 sc-eQTL 1.43e-01 -0.196 0.134 0.873 B_Memory L2
ENSG00000112339 HBS1L -626845 sc-eQTL 8.47e-01 -0.0233 0.121 0.873 B_Memory L2
ENSG00000118515 SGK1 158099 sc-eQTL 2.34e-01 -0.134 0.112 0.873 B_Memory L2
ENSG00000028839 TBPL1 524041 sc-eQTL 4.01e-01 -0.103 0.123 0.874 B_Naive1 L2
ENSG00000112339 HBS1L -626845 sc-eQTL 3.90e-01 -0.0916 0.106 0.874 B_Naive1 L2
ENSG00000118515 SGK1 158099 sc-eQTL 8.34e-01 -0.0214 0.102 0.874 B_Naive1 L2
ENSG00000028839 TBPL1 524041 sc-eQTL 5.67e-01 -0.0754 0.132 0.873 B_Naive2 L2
ENSG00000112339 HBS1L -626845 sc-eQTL 5.36e-01 -0.0751 0.121 0.873 B_Naive2 L2
ENSG00000118515 SGK1 158099 sc-eQTL 8.64e-01 -0.0207 0.12 0.873 B_Naive2 L2
ENSG00000028839 TBPL1 524041 sc-eQTL 2.34e-02 0.293 0.128 0.868 CD4_CTL L2
ENSG00000112339 HBS1L -626845 sc-eQTL 8.04e-01 0.0331 0.133 0.868 CD4_CTL L2
ENSG00000118513 MYB -705097 sc-eQTL 9.35e-01 0.00731 0.09 0.868 CD4_CTL L2
ENSG00000118515 SGK1 158099 sc-eQTL 4.54e-01 0.078 0.104 0.868 CD4_CTL L2
ENSG00000028839 TBPL1 524041 sc-eQTL 4.24e-01 -0.0849 0.106 0.874 CD4_Naive L2
ENSG00000112339 HBS1L -626845 sc-eQTL 7.88e-01 0.02 0.0742 0.874 CD4_Naive L2
ENSG00000118513 MYB -705097 sc-eQTL 4.18e-01 0.0632 0.0779 0.874 CD4_Naive L2
ENSG00000118515 SGK1 158099 sc-eQTL 1.33e-01 -0.115 0.0763 0.874 CD4_Naive L2
ENSG00000028839 TBPL1 524041 sc-eQTL 9.07e-02 -0.188 0.111 0.874 CD4_TCM L2
ENSG00000112339 HBS1L -626845 sc-eQTL 5.59e-01 0.0529 0.0903 0.874 CD4_TCM L2
ENSG00000118513 MYB -705097 sc-eQTL 8.83e-01 0.0129 0.0882 0.874 CD4_TCM L2
ENSG00000118515 SGK1 158099 sc-eQTL 1.15e-01 -0.126 0.0799 0.874 CD4_TCM L2
ENSG00000028839 TBPL1 524041 sc-eQTL 5.91e-01 0.0699 0.13 0.874 CD4_TEM L2
ENSG00000112339 HBS1L -626845 sc-eQTL 7.96e-02 -0.192 0.109 0.874 CD4_TEM L2
ENSG00000118513 MYB -705097 sc-eQTL 9.62e-01 0.0046 0.0965 0.874 CD4_TEM L2
ENSG00000118515 SGK1 158099 sc-eQTL 5.44e-02 -0.169 0.0872 0.874 CD4_TEM L2
ENSG00000028839 TBPL1 524041 sc-eQTL 1.96e-01 -0.15 0.116 0.874 CD8_CTL L2
ENSG00000112339 HBS1L -626845 sc-eQTL 1.23e-01 0.168 0.108 0.874 CD8_CTL L2
ENSG00000118513 MYB -705097 sc-eQTL 6.54e-01 -0.043 0.0959 0.874 CD8_CTL L2
ENSG00000118515 SGK1 158099 sc-eQTL 7.70e-02 -0.197 0.111 0.874 CD8_CTL L2
ENSG00000028839 TBPL1 524041 sc-eQTL 4.04e-01 -0.105 0.125 0.874 CD8_Naive L2
ENSG00000112339 HBS1L -626845 sc-eQTL 5.94e-01 0.053 0.0993 0.874 CD8_Naive L2
ENSG00000118513 MYB -705097 sc-eQTL 1.30e-01 0.141 0.0928 0.874 CD8_Naive L2
ENSG00000118515 SGK1 158099 sc-eQTL 1.23e-01 -0.128 0.0823 0.874 CD8_Naive L2
ENSG00000028839 TBPL1 524041 sc-eQTL 5.72e-01 0.0807 0.143 0.873 CD8_TCM L2
ENSG00000112339 HBS1L -626845 sc-eQTL 8.62e-01 0.0212 0.122 0.873 CD8_TCM L2
ENSG00000118513 MYB -705097 sc-eQTL 5.38e-01 -0.0709 0.115 0.873 CD8_TCM L2
ENSG00000118515 SGK1 158099 sc-eQTL 8.50e-01 -0.02 0.106 0.873 CD8_TCM L2
ENSG00000028839 TBPL1 524041 sc-eQTL 2.29e-01 -0.153 0.126 0.87 CD8_TEM L2
ENSG00000112339 HBS1L -626845 sc-eQTL 5.16e-01 -0.0849 0.13 0.87 CD8_TEM L2
ENSG00000118513 MYB -705097 sc-eQTL 8.70e-01 -0.017 0.104 0.87 CD8_TEM L2
ENSG00000118515 SGK1 158099 sc-eQTL 8.59e-01 -0.0216 0.121 0.87 CD8_TEM L2
ENSG00000028839 TBPL1 524041 sc-eQTL 2.98e-02 0.28 0.128 0.872 MAIT L2
ENSG00000112339 HBS1L -626845 sc-eQTL 2.43e-01 0.137 0.117 0.872 MAIT L2
ENSG00000118515 SGK1 158099 sc-eQTL 9.20e-01 0.00871 0.0865 0.872 MAIT L2
ENSG00000028839 TBPL1 524041 sc-eQTL 8.35e-01 -0.0293 0.14 0.873 NK_CD56bright L2
ENSG00000112339 HBS1L -626845 sc-eQTL 9.76e-01 0.00365 0.123 0.873 NK_CD56bright L2
ENSG00000118515 SGK1 158099 sc-eQTL 5.92e-01 -0.059 0.11 0.873 NK_CD56bright L2
ENSG00000028839 TBPL1 524041 sc-eQTL 7.68e-01 -0.0336 0.114 0.875 NK_CD56dim L2
ENSG00000112339 HBS1L -626845 sc-eQTL 3.77e-01 -0.092 0.104 0.875 NK_CD56dim L2
ENSG00000118515 SGK1 158099 sc-eQTL 9.72e-01 0.00407 0.114 0.875 NK_CD56dim L2
ENSG00000028839 TBPL1 524041 sc-eQTL 8.81e-01 0.0222 0.149 0.881 NK_HLA L2
ENSG00000112339 HBS1L -626845 sc-eQTL 6.68e-01 -0.0587 0.137 0.881 NK_HLA L2
ENSG00000118515 SGK1 158099 sc-eQTL 8.02e-01 -0.0316 0.126 0.881 NK_HLA L2
ENSG00000028839 TBPL1 524041 sc-eQTL 3.22e-01 -0.12 0.121 0.875 NK_cytokine L2
ENSG00000112339 HBS1L -626845 sc-eQTL 4.82e-01 0.0827 0.117 0.875 NK_cytokine L2
ENSG00000118515 SGK1 158099 sc-eQTL 1.25e-01 0.182 0.118 0.875 NK_cytokine L2
ENSG00000028839 TBPL1 524041 sc-eQTL 5.48e-03 0.434 0.153 0.863 PB L2
ENSG00000112339 HBS1L -626845 sc-eQTL 9.46e-01 -0.0085 0.126 0.863 PB L2
ENSG00000118515 SGK1 158099 sc-eQTL 7.63e-01 -0.0383 0.127 0.863 PB L2
ENSG00000028839 TBPL1 524041 sc-eQTL 8.89e-01 0.0187 0.133 0.872 Pro_T L2
ENSG00000112339 HBS1L -626845 sc-eQTL 3.26e-03 0.308 0.103 0.872 Pro_T L2
ENSG00000118515 SGK1 158099 sc-eQTL 6.52e-01 -0.0437 0.0967 0.872 Pro_T L2
ENSG00000028839 TBPL1 524041 sc-eQTL 6.20e-02 -0.246 0.131 0.874 Treg L2
ENSG00000112339 HBS1L -626845 sc-eQTL 7.42e-01 0.0377 0.114 0.874 Treg L2
ENSG00000118513 MYB -705097 sc-eQTL 5.81e-01 -0.0546 0.0988 0.874 Treg L2
ENSG00000118515 SGK1 158099 sc-eQTL 2.52e-01 -0.112 0.0974 0.874 Treg L2
ENSG00000028839 TBPL1 524041 sc-eQTL 5.90e-01 0.0748 0.138 0.871 cDC L2
ENSG00000112339 HBS1L -626845 sc-eQTL 5.43e-01 0.0838 0.137 0.871 cDC L2
ENSG00000118513 MYB -705097 sc-eQTL 5.96e-01 0.0528 0.0993 0.871 cDC L2
ENSG00000118515 SGK1 158099 sc-eQTL 3.92e-01 0.0882 0.103 0.871 cDC L2
ENSG00000286887 AL355881.1 179910 sc-eQTL 9.26e-01 -0.0111 0.119 0.871 cDC L2
ENSG00000028839 TBPL1 524041 sc-eQTL 7.93e-01 0.0286 0.109 0.874 cMono_IL1B L2
ENSG00000112339 HBS1L -626845 sc-eQTL 6.74e-01 -0.0447 0.106 0.874 cMono_IL1B L2
ENSG00000118515 SGK1 158099 sc-eQTL 5.88e-01 -0.0422 0.0778 0.874 cMono_IL1B L2
ENSG00000286887 AL355881.1 179910 sc-eQTL 6.69e-01 -0.0449 0.105 0.874 cMono_IL1B L2
ENSG00000028839 TBPL1 524041 sc-eQTL 5.87e-01 -0.0674 0.124 0.874 cMono_S100A L2
ENSG00000112339 HBS1L -626845 sc-eQTL 2.01e-01 -0.149 0.116 0.874 cMono_S100A L2
ENSG00000118515 SGK1 158099 sc-eQTL 5.87e-01 -0.0356 0.0655 0.874 cMono_S100A L2
ENSG00000286887 AL355881.1 179910 sc-eQTL 6.90e-01 0.0414 0.104 0.874 cMono_S100A L2
ENSG00000028839 TBPL1 524041 sc-eQTL 6.70e-01 -0.0754 0.177 0.879 gdT L2
ENSG00000112339 HBS1L -626845 sc-eQTL 1.08e-01 -0.25 0.154 0.879 gdT L2
ENSG00000118515 SGK1 158099 sc-eQTL 3.67e-01 -0.109 0.121 0.879 gdT L2
ENSG00000028839 TBPL1 524041 sc-eQTL 9.70e-01 -0.00474 0.126 0.878 intMono L2
ENSG00000112339 HBS1L -626845 sc-eQTL 4.64e-01 -0.0968 0.132 0.878 intMono L2
ENSG00000118515 SGK1 158099 sc-eQTL 4.10e-01 -0.0734 0.089 0.878 intMono L2
ENSG00000286887 AL355881.1 179910 sc-eQTL 9.23e-01 -0.0119 0.124 0.878 intMono L2
ENSG00000028839 TBPL1 524041 sc-eQTL 6.94e-01 -0.054 0.137 0.88 ncMono L2
ENSG00000112339 HBS1L -626845 sc-eQTL 7.17e-01 0.0455 0.125 0.88 ncMono L2
ENSG00000118515 SGK1 158099 sc-eQTL 7.71e-01 0.0258 0.0885 0.88 ncMono L2
ENSG00000286887 AL355881.1 179910 sc-eQTL 7.14e-01 -0.0429 0.117 0.88 ncMono L2
ENSG00000028839 TBPL1 524041 sc-eQTL 8.87e-01 0.0228 0.161 0.87 pDC L2
ENSG00000112339 HBS1L -626845 sc-eQTL 2.87e-01 -0.14 0.131 0.87 pDC L2
ENSG00000118513 MYB -705097 sc-eQTL 5.18e-01 0.0733 0.113 0.87 pDC L2
ENSG00000118515 SGK1 158099 sc-eQTL 7.67e-02 0.161 0.0903 0.87 pDC L2
ENSG00000286887 AL355881.1 179910 sc-eQTL 4.58e-01 0.0839 0.113 0.87 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 524041 sc-eQTL 7.95e-01 0.0347 0.134 0.874 B_Memory LOneK1K
ENSG00000112339 HBS1L -626845 sc-eQTL 3.78e-01 0.0988 0.112 0.874 B_Memory LOneK1K
ENSG00000118515 SGK1 158099 sc-eQTL 9.60e-02 -0.172 0.103 0.874 B_Memory LOneK1K
ENSG00000028839 TBPL1 524041 sc-eQTL 3.03e-01 -0.127 0.123 0.874 B_Naive LOneK1K
ENSG00000112339 HBS1L -626845 sc-eQTL 4.73e-01 -0.0726 0.101 0.874 B_Naive LOneK1K
ENSG00000118515 SGK1 158099 sc-eQTL 8.20e-01 -0.023 0.101 0.874 B_Naive LOneK1K
ENSG00000028839 TBPL1 524041 sc-eQTL 8.00e-01 0.0252 0.0992 0.874 CD14_Mono LOneK1K
ENSG00000112339 HBS1L -626845 sc-eQTL 2.78e-01 -0.105 0.0966 0.874 CD14_Mono LOneK1K
ENSG00000118515 SGK1 158099 sc-eQTL 3.77e-01 -0.064 0.0723 0.874 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 179910 sc-eQTL 6.55e-01 -0.0444 0.0992 0.874 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 524041 sc-eQTL 7.86e-01 -0.0349 0.129 0.877 CD16_Mono LOneK1K
ENSG00000112339 HBS1L -626845 sc-eQTL 4.63e-01 0.0857 0.117 0.877 CD16_Mono LOneK1K
ENSG00000118515 SGK1 158099 sc-eQTL 6.37e-01 -0.0354 0.0749 0.877 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 179910 sc-eQTL 9.63e-01 -0.00505 0.109 0.877 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 524041 sc-eQTL 5.69e-01 -0.0597 0.105 0.875 NK_CD56dim LOneK1K
ENSG00000112339 HBS1L -626845 sc-eQTL 4.17e-01 -0.0759 0.0934 0.875 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 158099 sc-eQTL 3.15e-01 0.105 0.105 0.875 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000112339 HBS1L -626845 eQTL 0.0424 0.0428 0.0211 0.0 0.0 0.137
ENSG00000118515 SGK1 158099 eQTL 0.0395 0.0691 0.0335 0.00148 0.0 0.137
ENSG00000220378 KRT8P42 177516 eQTL 0.0409 -0.0914 0.0447 0.00132 0.0 0.137

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina