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Genes within 1Mb (chr6:134424915:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 472745 sc-eQTL 2.09e-01 -0.118 0.0937 0.28 B L1
ENSG00000112339 HBS1L -678141 sc-eQTL 2.69e-01 0.0637 0.0574 0.28 B L1
ENSG00000118515 SGK1 106803 sc-eQTL 9.44e-01 0.00458 0.0656 0.28 B L1
ENSG00000028839 TBPL1 472745 sc-eQTL 3.24e-01 -0.0676 0.0684 0.28 CD4T L1
ENSG00000112339 HBS1L -678141 sc-eQTL 1.96e-01 -0.0643 0.0495 0.28 CD4T L1
ENSG00000118513 MYB -756393 sc-eQTL 9.09e-01 -0.00631 0.0549 0.28 CD4T L1
ENSG00000118515 SGK1 106803 sc-eQTL 5.33e-01 0.0352 0.0563 0.28 CD4T L1
ENSG00000028839 TBPL1 472745 sc-eQTL 6.55e-01 0.0304 0.0678 0.28 CD8T L1
ENSG00000112339 HBS1L -678141 sc-eQTL 9.97e-01 -0.000213 0.0585 0.28 CD8T L1
ENSG00000118513 MYB -756393 sc-eQTL 9.08e-01 -0.00748 0.0647 0.28 CD8T L1
ENSG00000118515 SGK1 106803 sc-eQTL 1.94e-01 0.0565 0.0434 0.28 CD8T L1
ENSG00000028839 TBPL1 472745 sc-eQTL 4.91e-02 0.205 0.103 0.284 DC L1
ENSG00000112339 HBS1L -678141 sc-eQTL 5.17e-01 0.0592 0.091 0.284 DC L1
ENSG00000118513 MYB -756393 sc-eQTL 8.02e-01 -0.0166 0.0662 0.284 DC L1
ENSG00000118515 SGK1 106803 sc-eQTL 1.57e-02 -0.145 0.0596 0.284 DC L1
ENSG00000286887 AL355881.1 128614 sc-eQTL 7.24e-01 -0.0331 0.0935 0.284 DC L1
ENSG00000028839 TBPL1 472745 sc-eQTL 7.54e-01 0.0227 0.0723 0.28 Mono L1
ENSG00000112339 HBS1L -678141 sc-eQTL 2.89e-02 0.156 0.0709 0.28 Mono L1
ENSG00000118515 SGK1 106803 sc-eQTL 4.49e-01 -0.0405 0.0533 0.28 Mono L1
ENSG00000286887 AL355881.1 128614 sc-eQTL 5.25e-01 -0.0468 0.0734 0.28 Mono L1
ENSG00000028839 TBPL1 472745 sc-eQTL 4.51e-01 -0.0591 0.0782 0.279 NK L1
ENSG00000112339 HBS1L -678141 sc-eQTL 6.97e-02 -0.116 0.0637 0.279 NK L1
ENSG00000118515 SGK1 106803 sc-eQTL 4.97e-01 -0.0469 0.0689 0.279 NK L1
ENSG00000028839 TBPL1 472745 sc-eQTL 7.30e-01 -0.032 0.0925 0.28 Other_T L1
ENSG00000112339 HBS1L -678141 sc-eQTL 1.96e-02 -0.142 0.0605 0.28 Other_T L1
ENSG00000118515 SGK1 106803 sc-eQTL 3.36e-01 -0.0618 0.0641 0.28 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 472745 sc-eQTL 4.53e-01 -0.0843 0.112 0.273 B_Activated L2
ENSG00000112339 HBS1L -678141 sc-eQTL 2.65e-01 -0.13 0.116 0.273 B_Activated L2
ENSG00000118515 SGK1 106803 sc-eQTL 9.05e-01 0.0117 0.0978 0.273 B_Activated L2
ENSG00000028839 TBPL1 472745 sc-eQTL 6.62e-01 -0.0445 0.102 0.281 B_Intermediate L2
ENSG00000112339 HBS1L -678141 sc-eQTL 2.36e-01 -0.107 0.0897 0.281 B_Intermediate L2
ENSG00000118515 SGK1 106803 sc-eQTL 4.24e-01 -0.0745 0.0931 0.281 B_Intermediate L2
ENSG00000028839 TBPL1 472745 sc-eQTL 7.36e-01 -0.033 0.0977 0.282 B_Memory L2
ENSG00000112339 HBS1L -678141 sc-eQTL 5.01e-01 0.0593 0.0879 0.282 B_Memory L2
ENSG00000118515 SGK1 106803 sc-eQTL 4.85e-04 -0.282 0.0794 0.282 B_Memory L2
ENSG00000028839 TBPL1 472745 sc-eQTL 7.52e-01 0.0295 0.0932 0.28 B_Naive1 L2
ENSG00000112339 HBS1L -678141 sc-eQTL 8.51e-01 -0.0152 0.081 0.28 B_Naive1 L2
ENSG00000118515 SGK1 106803 sc-eQTL 7.70e-01 0.0226 0.0775 0.28 B_Naive1 L2
ENSG00000028839 TBPL1 472745 sc-eQTL 1.54e-01 -0.14 0.0979 0.281 B_Naive2 L2
ENSG00000112339 HBS1L -678141 sc-eQTL 1.92e-02 0.211 0.0894 0.281 B_Naive2 L2
ENSG00000118515 SGK1 106803 sc-eQTL 2.86e-01 0.0958 0.0895 0.281 B_Naive2 L2
ENSG00000028839 TBPL1 472745 sc-eQTL 8.89e-01 0.0133 0.0952 0.282 CD4_CTL L2
ENSG00000112339 HBS1L -678141 sc-eQTL 4.21e-01 -0.0787 0.0976 0.282 CD4_CTL L2
ENSG00000118513 MYB -756393 sc-eQTL 3.38e-02 0.14 0.0653 0.282 CD4_CTL L2
ENSG00000118515 SGK1 106803 sc-eQTL 4.67e-01 -0.0557 0.0763 0.282 CD4_CTL L2
ENSG00000028839 TBPL1 472745 sc-eQTL 8.85e-01 -0.0114 0.0786 0.28 CD4_Naive L2
ENSG00000112339 HBS1L -678141 sc-eQTL 5.02e-01 -0.0369 0.0548 0.28 CD4_Naive L2
ENSG00000118513 MYB -756393 sc-eQTL 4.46e-01 -0.044 0.0576 0.28 CD4_Naive L2
ENSG00000118515 SGK1 106803 sc-eQTL 3.38e-01 0.0543 0.0566 0.28 CD4_Naive L2
ENSG00000028839 TBPL1 472745 sc-eQTL 4.77e-01 -0.0597 0.0839 0.28 CD4_TCM L2
ENSG00000112339 HBS1L -678141 sc-eQTL 4.74e-01 0.0487 0.0679 0.28 CD4_TCM L2
ENSG00000118513 MYB -756393 sc-eQTL 7.36e-01 -0.0224 0.0663 0.28 CD4_TCM L2
ENSG00000118515 SGK1 106803 sc-eQTL 7.59e-01 0.0186 0.0605 0.28 CD4_TCM L2
ENSG00000028839 TBPL1 472745 sc-eQTL 3.42e-01 -0.0919 0.0966 0.28 CD4_TEM L2
ENSG00000112339 HBS1L -678141 sc-eQTL 1.16e-01 -0.128 0.0813 0.28 CD4_TEM L2
ENSG00000118513 MYB -756393 sc-eQTL 6.94e-01 -0.0283 0.0718 0.28 CD4_TEM L2
ENSG00000118515 SGK1 106803 sc-eQTL 5.88e-01 0.0355 0.0655 0.28 CD4_TEM L2
ENSG00000028839 TBPL1 472745 sc-eQTL 3.68e-01 0.0772 0.0856 0.28 CD8_CTL L2
ENSG00000112339 HBS1L -678141 sc-eQTL 8.85e-01 0.0116 0.0804 0.28 CD8_CTL L2
ENSG00000118513 MYB -756393 sc-eQTL 1.20e-01 0.11 0.0704 0.28 CD8_CTL L2
ENSG00000118515 SGK1 106803 sc-eQTL 2.48e-01 -0.0951 0.0821 0.28 CD8_CTL L2
ENSG00000028839 TBPL1 472745 sc-eQTL 6.77e-01 0.0383 0.092 0.28 CD8_Naive L2
ENSG00000112339 HBS1L -678141 sc-eQTL 6.78e-01 -0.0303 0.0729 0.28 CD8_Naive L2
ENSG00000118513 MYB -756393 sc-eQTL 2.18e-01 -0.0842 0.0682 0.28 CD8_Naive L2
ENSG00000118515 SGK1 106803 sc-eQTL 5.35e-01 0.0377 0.0607 0.28 CD8_Naive L2
ENSG00000028839 TBPL1 472745 sc-eQTL 8.68e-01 0.0173 0.104 0.289 CD8_TCM L2
ENSG00000112339 HBS1L -678141 sc-eQTL 3.63e-01 0.0809 0.0888 0.289 CD8_TCM L2
ENSG00000118513 MYB -756393 sc-eQTL 3.18e-01 0.0836 0.0835 0.289 CD8_TCM L2
ENSG00000118515 SGK1 106803 sc-eQTL 5.26e-01 -0.0488 0.0769 0.289 CD8_TCM L2
ENSG00000028839 TBPL1 472745 sc-eQTL 7.10e-01 0.0343 0.0922 0.283 CD8_TEM L2
ENSG00000112339 HBS1L -678141 sc-eQTL 3.37e-01 -0.0912 0.0947 0.283 CD8_TEM L2
ENSG00000118513 MYB -756393 sc-eQTL 1.67e-01 -0.104 0.0752 0.283 CD8_TEM L2
ENSG00000118515 SGK1 106803 sc-eQTL 1.29e-02 -0.218 0.0869 0.283 CD8_TEM L2
ENSG00000028839 TBPL1 472745 sc-eQTL 4.45e-01 -0.0739 0.0966 0.277 MAIT L2
ENSG00000112339 HBS1L -678141 sc-eQTL 3.09e-02 -0.188 0.0867 0.277 MAIT L2
ENSG00000118515 SGK1 106803 sc-eQTL 3.09e-02 -0.139 0.064 0.277 MAIT L2
ENSG00000028839 TBPL1 472745 sc-eQTL 3.76e-01 -0.0909 0.102 0.28 NK_CD56bright L2
ENSG00000112339 HBS1L -678141 sc-eQTL 5.15e-01 -0.0583 0.0894 0.28 NK_CD56bright L2
ENSG00000118515 SGK1 106803 sc-eQTL 3.69e-01 -0.0722 0.0803 0.28 NK_CD56bright L2
ENSG00000028839 TBPL1 472745 sc-eQTL 2.16e-01 -0.104 0.0838 0.278 NK_CD56dim L2
ENSG00000112339 HBS1L -678141 sc-eQTL 1.92e-01 -0.1 0.0768 0.278 NK_CD56dim L2
ENSG00000118515 SGK1 106803 sc-eQTL 2.96e-01 -0.0885 0.0845 0.278 NK_CD56dim L2
ENSG00000028839 TBPL1 472745 sc-eQTL 1.98e-02 -0.24 0.102 0.281 NK_HLA L2
ENSG00000112339 HBS1L -678141 sc-eQTL 6.25e-01 -0.0466 0.0953 0.281 NK_HLA L2
ENSG00000118515 SGK1 106803 sc-eQTL 2.80e-01 -0.0949 0.0876 0.281 NK_HLA L2
ENSG00000028839 TBPL1 472745 sc-eQTL 4.43e-01 0.0664 0.0865 0.278 NK_cytokine L2
ENSG00000112339 HBS1L -678141 sc-eQTL 1.00e-01 -0.138 0.0836 0.278 NK_cytokine L2
ENSG00000118515 SGK1 106803 sc-eQTL 8.47e-01 -0.0164 0.0851 0.278 NK_cytokine L2
ENSG00000028839 TBPL1 472745 sc-eQTL 2.19e-01 -0.153 0.124 0.259 PB L2
ENSG00000112339 HBS1L -678141 sc-eQTL 5.48e-01 -0.0594 0.0986 0.259 PB L2
ENSG00000118515 SGK1 106803 sc-eQTL 7.85e-01 0.0273 0.0994 0.259 PB L2
ENSG00000028839 TBPL1 472745 sc-eQTL 7.32e-01 -0.0337 0.0982 0.28 Pro_T L2
ENSG00000112339 HBS1L -678141 sc-eQTL 1.61e-01 -0.109 0.0775 0.28 Pro_T L2
ENSG00000118515 SGK1 106803 sc-eQTL 9.30e-01 0.00623 0.0713 0.28 Pro_T L2
ENSG00000028839 TBPL1 472745 sc-eQTL 8.64e-01 -0.0169 0.0985 0.28 Treg L2
ENSG00000112339 HBS1L -678141 sc-eQTL 1.43e-01 -0.125 0.0848 0.28 Treg L2
ENSG00000118513 MYB -756393 sc-eQTL 8.84e-01 0.0107 0.0737 0.28 Treg L2
ENSG00000118515 SGK1 106803 sc-eQTL 5.59e-01 0.0426 0.0728 0.28 Treg L2
ENSG00000028839 TBPL1 472745 sc-eQTL 3.04e-01 0.107 0.104 0.288 cDC L2
ENSG00000112339 HBS1L -678141 sc-eQTL 4.71e-01 0.0747 0.103 0.288 cDC L2
ENSG00000118513 MYB -756393 sc-eQTL 2.72e-01 -0.082 0.0745 0.288 cDC L2
ENSG00000118515 SGK1 106803 sc-eQTL 9.93e-05 -0.296 0.0743 0.288 cDC L2
ENSG00000286887 AL355881.1 128614 sc-eQTL 2.18e-01 -0.11 0.0892 0.288 cDC L2
ENSG00000028839 TBPL1 472745 sc-eQTL 8.95e-01 -0.0109 0.0825 0.28 cMono_IL1B L2
ENSG00000112339 HBS1L -678141 sc-eQTL 2.97e-01 0.084 0.0804 0.28 cMono_IL1B L2
ENSG00000118515 SGK1 106803 sc-eQTL 4.76e-01 -0.0422 0.0591 0.28 cMono_IL1B L2
ENSG00000286887 AL355881.1 128614 sc-eQTL 2.32e-01 -0.0951 0.0794 0.28 cMono_IL1B L2
ENSG00000028839 TBPL1 472745 sc-eQTL 1.64e-01 0.13 0.0934 0.28 cMono_S100A L2
ENSG00000112339 HBS1L -678141 sc-eQTL 1.39e-01 0.13 0.0876 0.28 cMono_S100A L2
ENSG00000118515 SGK1 106803 sc-eQTL 8.31e-01 -0.0106 0.0496 0.28 cMono_S100A L2
ENSG00000286887 AL355881.1 128614 sc-eQTL 7.36e-01 -0.0265 0.0785 0.28 cMono_S100A L2
ENSG00000028839 TBPL1 472745 sc-eQTL 5.34e-02 0.226 0.116 0.303 gdT L2
ENSG00000112339 HBS1L -678141 sc-eQTL 6.80e-01 -0.0429 0.104 0.303 gdT L2
ENSG00000118515 SGK1 106803 sc-eQTL 7.62e-01 0.0245 0.0805 0.303 gdT L2
ENSG00000028839 TBPL1 472745 sc-eQTL 5.44e-01 0.0579 0.0952 0.284 intMono L2
ENSG00000112339 HBS1L -678141 sc-eQTL 2.54e-01 0.114 0.0997 0.284 intMono L2
ENSG00000118515 SGK1 106803 sc-eQTL 5.11e-01 -0.0444 0.0674 0.284 intMono L2
ENSG00000286887 AL355881.1 128614 sc-eQTL 8.25e-01 -0.0207 0.0935 0.284 intMono L2
ENSG00000028839 TBPL1 472745 sc-eQTL 1.06e-01 -0.161 0.0989 0.283 ncMono L2
ENSG00000112339 HBS1L -678141 sc-eQTL 3.59e-01 0.0836 0.0909 0.283 ncMono L2
ENSG00000118515 SGK1 106803 sc-eQTL 7.02e-02 -0.116 0.0638 0.283 ncMono L2
ENSG00000286887 AL355881.1 128614 sc-eQTL 9.64e-01 -0.00386 0.0849 0.283 ncMono L2
ENSG00000028839 TBPL1 472745 sc-eQTL 2.00e-01 0.145 0.113 0.299 pDC L2
ENSG00000112339 HBS1L -678141 sc-eQTL 1.11e-01 -0.148 0.092 0.299 pDC L2
ENSG00000118513 MYB -756393 sc-eQTL 7.54e-01 0.025 0.0799 0.299 pDC L2
ENSG00000118515 SGK1 106803 sc-eQTL 7.49e-01 -0.0206 0.0644 0.299 pDC L2
ENSG00000286887 AL355881.1 128614 sc-eQTL 1.16e-01 0.125 0.079 0.299 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 472745 sc-eQTL 3.60e-01 -0.0899 0.098 0.28 B_Memory LOneK1K
ENSG00000112339 HBS1L -678141 sc-eQTL 7.36e-01 -0.0277 0.0822 0.28 B_Memory LOneK1K
ENSG00000118515 SGK1 106803 sc-eQTL 9.46e-02 -0.127 0.0756 0.28 B_Memory LOneK1K
ENSG00000028839 TBPL1 472745 sc-eQTL 3.99e-01 -0.0782 0.0925 0.28 B_Naive LOneK1K
ENSG00000112339 HBS1L -678141 sc-eQTL 2.38e-01 0.0898 0.076 0.28 B_Naive LOneK1K
ENSG00000118515 SGK1 106803 sc-eQTL 6.04e-01 0.0394 0.0759 0.28 B_Naive LOneK1K
ENSG00000028839 TBPL1 472745 sc-eQTL 6.12e-01 0.0382 0.0753 0.28 CD14_Mono LOneK1K
ENSG00000112339 HBS1L -678141 sc-eQTL 3.78e-02 0.152 0.0728 0.28 CD14_Mono LOneK1K
ENSG00000118515 SGK1 106803 sc-eQTL 6.55e-01 -0.0246 0.055 0.28 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 128614 sc-eQTL 4.35e-01 -0.0588 0.0752 0.28 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 472745 sc-eQTL 6.09e-01 -0.049 0.0957 0.278 CD16_Mono LOneK1K
ENSG00000112339 HBS1L -678141 sc-eQTL 1.80e-01 0.116 0.0866 0.278 CD16_Mono LOneK1K
ENSG00000118515 SGK1 106803 sc-eQTL 2.88e-01 -0.0592 0.0556 0.278 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 128614 sc-eQTL 5.46e-01 0.0488 0.0808 0.278 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 472745 sc-eQTL 4.96e-01 -0.0525 0.0771 0.278 NK_CD56dim LOneK1K
ENSG00000112339 HBS1L -678141 sc-eQTL 1.52e-01 -0.0987 0.0686 0.278 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 106803 sc-eQTL 5.41e-01 -0.0473 0.0773 0.278 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000028839 TBPL1 472745 eQTL 0.0494 -0.0273 0.0139 0.0 0.0 0.299

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina