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Genes within 1Mb (chr6:134315501:CT:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 363331 sc-eQTL 4.41e-01 -0.0723 0.0938 0.28 B L1
ENSG00000112339 HBS1L -787555 sc-eQTL 7.30e-01 0.0198 0.0575 0.28 B L1
ENSG00000118515 SGK1 -2611 sc-eQTL 9.24e-03 -0.169 0.0645 0.28 B L1
ENSG00000028839 TBPL1 363331 sc-eQTL 3.15e-01 0.0685 0.068 0.28 CD4T L1
ENSG00000112339 HBS1L -787555 sc-eQTL 2.40e-01 0.058 0.0492 0.28 CD4T L1
ENSG00000118513 MYB -865807 sc-eQTL 3.39e-01 -0.0522 0.0545 0.28 CD4T L1
ENSG00000118515 SGK1 -2611 sc-eQTL 4.21e-03 -0.159 0.055 0.28 CD4T L1
ENSG00000028839 TBPL1 363331 sc-eQTL 5.26e-01 0.0427 0.0672 0.28 CD8T L1
ENSG00000112339 HBS1L -787555 sc-eQTL 3.87e-01 -0.0502 0.0579 0.28 CD8T L1
ENSG00000118513 MYB -865807 sc-eQTL 6.29e-01 -0.031 0.0641 0.28 CD8T L1
ENSG00000118515 SGK1 -2611 sc-eQTL 2.17e-02 -0.0986 0.0426 0.28 CD8T L1
ENSG00000028839 TBPL1 363331 sc-eQTL 4.60e-01 -0.0777 0.105 0.275 DC L1
ENSG00000112339 HBS1L -787555 sc-eQTL 6.76e-02 0.167 0.091 0.275 DC L1
ENSG00000118513 MYB -865807 sc-eQTL 8.13e-01 -0.0158 0.0667 0.275 DC L1
ENSG00000118515 SGK1 -2611 sc-eQTL 4.53e-02 -0.121 0.0603 0.275 DC L1
ENSG00000286887 AL355881.1 19200 sc-eQTL 1.70e-01 -0.129 0.0938 0.275 DC L1
ENSG00000028839 TBPL1 363331 sc-eQTL 2.08e-01 0.09 0.0713 0.28 Mono L1
ENSG00000112339 HBS1L -787555 sc-eQTL 2.27e-01 0.0856 0.0707 0.28 Mono L1
ENSG00000118515 SGK1 -2611 sc-eQTL 1.23e-06 -0.25 0.05 0.28 Mono L1
ENSG00000286887 AL355881.1 19200 sc-eQTL 1.59e-06 -0.34 0.0689 0.28 Mono L1
ENSG00000028839 TBPL1 363331 sc-eQTL 9.09e-01 0.0089 0.0782 0.281 NK L1
ENSG00000112339 HBS1L -787555 sc-eQTL 9.37e-01 -0.00511 0.064 0.281 NK L1
ENSG00000118515 SGK1 -2611 sc-eQTL 5.38e-03 -0.19 0.0676 0.281 NK L1
ENSG00000028839 TBPL1 363331 sc-eQTL 3.51e-02 0.193 0.091 0.28 Other_T L1
ENSG00000112339 HBS1L -787555 sc-eQTL 6.86e-01 0.0247 0.0608 0.28 Other_T L1
ENSG00000118515 SGK1 -2611 sc-eQTL 9.31e-03 -0.165 0.0628 0.28 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 363331 sc-eQTL 8.71e-01 -0.0186 0.114 0.281 B_Activated L2
ENSG00000112339 HBS1L -787555 sc-eQTL 5.56e-02 0.227 0.118 0.281 B_Activated L2
ENSG00000118515 SGK1 -2611 sc-eQTL 4.76e-03 -0.279 0.0974 0.281 B_Activated L2
ENSG00000028839 TBPL1 363331 sc-eQTL 8.35e-01 0.0215 0.103 0.279 B_Intermediate L2
ENSG00000112339 HBS1L -787555 sc-eQTL 4.00e-01 0.0766 0.0909 0.279 B_Intermediate L2
ENSG00000118515 SGK1 -2611 sc-eQTL 1.68e-03 -0.293 0.0921 0.279 B_Intermediate L2
ENSG00000028839 TBPL1 363331 sc-eQTL 7.00e-01 -0.0388 0.1 0.278 B_Memory L2
ENSG00000112339 HBS1L -787555 sc-eQTL 6.10e-01 -0.0462 0.0905 0.278 B_Memory L2
ENSG00000118515 SGK1 -2611 sc-eQTL 3.69e-01 -0.0755 0.0839 0.278 B_Memory L2
ENSG00000028839 TBPL1 363331 sc-eQTL 7.44e-01 -0.0306 0.0937 0.28 B_Naive1 L2
ENSG00000112339 HBS1L -787555 sc-eQTL 1.21e-01 0.126 0.0809 0.28 B_Naive1 L2
ENSG00000118515 SGK1 -2611 sc-eQTL 4.53e-02 -0.155 0.0772 0.28 B_Naive1 L2
ENSG00000028839 TBPL1 363331 sc-eQTL 7.96e-01 -0.0254 0.0984 0.279 B_Naive2 L2
ENSG00000112339 HBS1L -787555 sc-eQTL 7.17e-01 -0.0329 0.0907 0.279 B_Naive2 L2
ENSG00000118515 SGK1 -2611 sc-eQTL 1.33e-01 -0.135 0.0893 0.279 B_Naive2 L2
ENSG00000028839 TBPL1 363331 sc-eQTL 9.55e-01 -0.00546 0.0965 0.289 CD4_CTL L2
ENSG00000112339 HBS1L -787555 sc-eQTL 3.61e-01 -0.0905 0.0988 0.289 CD4_CTL L2
ENSG00000118513 MYB -865807 sc-eQTL 1.02e-01 -0.109 0.0665 0.289 CD4_CTL L2
ENSG00000118515 SGK1 -2611 sc-eQTL 2.85e-02 -0.169 0.0765 0.289 CD4_CTL L2
ENSG00000028839 TBPL1 363331 sc-eQTL 2.21e-01 0.0948 0.0773 0.28 CD4_Naive L2
ENSG00000112339 HBS1L -787555 sc-eQTL 5.87e-01 0.0294 0.0541 0.28 CD4_Naive L2
ENSG00000118513 MYB -865807 sc-eQTL 1.89e-01 -0.0747 0.0567 0.28 CD4_Naive L2
ENSG00000118515 SGK1 -2611 sc-eQTL 4.54e-02 -0.112 0.0554 0.28 CD4_Naive L2
ENSG00000028839 TBPL1 363331 sc-eQTL 6.70e-01 0.0358 0.0839 0.28 CD4_TCM L2
ENSG00000112339 HBS1L -787555 sc-eQTL 3.95e-01 0.0579 0.0678 0.28 CD4_TCM L2
ENSG00000118513 MYB -865807 sc-eQTL 4.18e-01 -0.0538 0.0662 0.28 CD4_TCM L2
ENSG00000118515 SGK1 -2611 sc-eQTL 4.43e-05 -0.242 0.0581 0.28 CD4_TCM L2
ENSG00000028839 TBPL1 363331 sc-eQTL 8.23e-01 0.0217 0.0967 0.28 CD4_TEM L2
ENSG00000112339 HBS1L -787555 sc-eQTL 6.33e-01 0.0391 0.0817 0.28 CD4_TEM L2
ENSG00000118513 MYB -865807 sc-eQTL 5.72e-01 0.0406 0.0718 0.28 CD4_TEM L2
ENSG00000118515 SGK1 -2611 sc-eQTL 1.74e-04 -0.242 0.0634 0.28 CD4_TEM L2
ENSG00000028839 TBPL1 363331 sc-eQTL 4.00e-01 0.0721 0.0855 0.28 CD8_CTL L2
ENSG00000112339 HBS1L -787555 sc-eQTL 6.13e-01 0.0406 0.0802 0.28 CD8_CTL L2
ENSG00000118513 MYB -865807 sc-eQTL 6.88e-01 -0.0284 0.0707 0.28 CD8_CTL L2
ENSG00000118515 SGK1 -2611 sc-eQTL 7.49e-02 -0.146 0.0816 0.28 CD8_CTL L2
ENSG00000028839 TBPL1 363331 sc-eQTL 8.71e-01 0.015 0.0921 0.28 CD8_Naive L2
ENSG00000112339 HBS1L -787555 sc-eQTL 1.52e-01 -0.105 0.0727 0.28 CD8_Naive L2
ENSG00000118513 MYB -865807 sc-eQTL 7.12e-01 0.0253 0.0685 0.28 CD8_Naive L2
ENSG00000118515 SGK1 -2611 sc-eQTL 1.08e-01 -0.0975 0.0605 0.28 CD8_Naive L2
ENSG00000028839 TBPL1 363331 sc-eQTL 5.25e-01 0.0659 0.104 0.275 CD8_TCM L2
ENSG00000112339 HBS1L -787555 sc-eQTL 8.02e-01 -0.0223 0.0887 0.275 CD8_TCM L2
ENSG00000118513 MYB -865807 sc-eQTL 8.68e-01 -0.0139 0.0835 0.275 CD8_TCM L2
ENSG00000118515 SGK1 -2611 sc-eQTL 7.05e-03 -0.205 0.0754 0.275 CD8_TCM L2
ENSG00000028839 TBPL1 363331 sc-eQTL 9.99e-01 -6.86e-05 0.0931 0.283 CD8_TEM L2
ENSG00000112339 HBS1L -787555 sc-eQTL 5.70e-01 -0.0545 0.0957 0.283 CD8_TEM L2
ENSG00000118513 MYB -865807 sc-eQTL 5.60e-02 -0.145 0.0755 0.283 CD8_TEM L2
ENSG00000118515 SGK1 -2611 sc-eQTL 4.52e-01 -0.067 0.0889 0.283 CD8_TEM L2
ENSG00000028839 TBPL1 363331 sc-eQTL 6.42e-01 0.0455 0.0977 0.279 MAIT L2
ENSG00000112339 HBS1L -787555 sc-eQTL 1.39e-01 0.131 0.0881 0.279 MAIT L2
ENSG00000118515 SGK1 -2611 sc-eQTL 4.21e-02 -0.132 0.0647 0.279 MAIT L2
ENSG00000028839 TBPL1 363331 sc-eQTL 2.90e-01 0.109 0.103 0.289 NK_CD56bright L2
ENSG00000112339 HBS1L -787555 sc-eQTL 5.27e-01 -0.0572 0.0901 0.289 NK_CD56bright L2
ENSG00000118515 SGK1 -2611 sc-eQTL 9.73e-03 -0.208 0.0797 0.289 NK_CD56bright L2
ENSG00000028839 TBPL1 363331 sc-eQTL 8.77e-01 -0.013 0.0838 0.282 NK_CD56dim L2
ENSG00000112339 HBS1L -787555 sc-eQTL 3.34e-01 0.0742 0.0766 0.282 NK_CD56dim L2
ENSG00000118515 SGK1 -2611 sc-eQTL 1.97e-01 -0.109 0.084 0.282 NK_CD56dim L2
ENSG00000028839 TBPL1 363331 sc-eQTL 6.31e-01 0.0507 0.105 0.285 NK_HLA L2
ENSG00000112339 HBS1L -787555 sc-eQTL 1.40e-01 -0.143 0.0967 0.285 NK_HLA L2
ENSG00000118515 SGK1 -2611 sc-eQTL 6.15e-01 -0.045 0.0895 0.285 NK_HLA L2
ENSG00000028839 TBPL1 363331 sc-eQTL 4.79e-01 0.0614 0.0866 0.282 NK_cytokine L2
ENSG00000112339 HBS1L -787555 sc-eQTL 8.83e-01 0.0124 0.0842 0.282 NK_cytokine L2
ENSG00000118515 SGK1 -2611 sc-eQTL 2.10e-01 -0.107 0.0849 0.282 NK_cytokine L2
ENSG00000028839 TBPL1 363331 sc-eQTL 3.82e-01 0.106 0.12 0.289 PB L2
ENSG00000112339 HBS1L -787555 sc-eQTL 1.38e-01 0.142 0.0949 0.289 PB L2
ENSG00000118515 SGK1 -2611 sc-eQTL 3.04e-01 -0.0992 0.0961 0.289 PB L2
ENSG00000028839 TBPL1 363331 sc-eQTL 1.67e-01 0.137 0.0988 0.28 Pro_T L2
ENSG00000112339 HBS1L -787555 sc-eQTL 4.11e-01 -0.0647 0.0785 0.28 Pro_T L2
ENSG00000118515 SGK1 -2611 sc-eQTL 1.17e-01 -0.113 0.0717 0.28 Pro_T L2
ENSG00000028839 TBPL1 363331 sc-eQTL 7.68e-01 0.0293 0.0991 0.28 Treg L2
ENSG00000112339 HBS1L -787555 sc-eQTL 8.47e-01 0.0166 0.0857 0.28 Treg L2
ENSG00000118513 MYB -865807 sc-eQTL 5.96e-01 -0.0394 0.0741 0.28 Treg L2
ENSG00000118515 SGK1 -2611 sc-eQTL 1.14e-03 -0.236 0.0714 0.28 Treg L2
ENSG00000028839 TBPL1 363331 sc-eQTL 5.67e-01 -0.0601 0.105 0.278 cDC L2
ENSG00000112339 HBS1L -787555 sc-eQTL 2.35e-01 0.124 0.104 0.278 cDC L2
ENSG00000118513 MYB -865807 sc-eQTL 1.26e-01 -0.115 0.0747 0.278 cDC L2
ENSG00000118515 SGK1 -2611 sc-eQTL 1.58e-03 -0.243 0.0758 0.278 cDC L2
ENSG00000286887 AL355881.1 19200 sc-eQTL 7.19e-01 -0.0324 0.0901 0.278 cDC L2
ENSG00000028839 TBPL1 363331 sc-eQTL 6.33e-01 0.039 0.0814 0.28 cMono_IL1B L2
ENSG00000112339 HBS1L -787555 sc-eQTL 6.52e-02 0.146 0.079 0.28 cMono_IL1B L2
ENSG00000118515 SGK1 -2611 sc-eQTL 4.89e-06 -0.261 0.0556 0.28 cMono_IL1B L2
ENSG00000286887 AL355881.1 19200 sc-eQTL 4.12e-05 -0.317 0.0756 0.28 cMono_IL1B L2
ENSG00000028839 TBPL1 363331 sc-eQTL 6.43e-01 -0.0428 0.0922 0.28 cMono_S100A L2
ENSG00000112339 HBS1L -787555 sc-eQTL 7.10e-01 0.0323 0.0866 0.28 cMono_S100A L2
ENSG00000118515 SGK1 -2611 sc-eQTL 2.13e-05 -0.203 0.0467 0.28 cMono_S100A L2
ENSG00000286887 AL355881.1 19200 sc-eQTL 4.25e-03 -0.219 0.0757 0.28 cMono_S100A L2
ENSG00000028839 TBPL1 363331 sc-eQTL 5.93e-01 0.0676 0.126 0.282 gdT L2
ENSG00000112339 HBS1L -787555 sc-eQTL 2.33e-01 0.133 0.111 0.282 gdT L2
ENSG00000118515 SGK1 -2611 sc-eQTL 7.85e-01 -0.0236 0.0864 0.282 gdT L2
ENSG00000028839 TBPL1 363331 sc-eQTL 5.66e-01 0.0542 0.0941 0.28 intMono L2
ENSG00000112339 HBS1L -787555 sc-eQTL 8.54e-01 -0.0182 0.0988 0.28 intMono L2
ENSG00000118515 SGK1 -2611 sc-eQTL 4.51e-04 -0.231 0.0647 0.28 intMono L2
ENSG00000286887 AL355881.1 19200 sc-eQTL 5.03e-01 -0.062 0.0924 0.28 intMono L2
ENSG00000028839 TBPL1 363331 sc-eQTL 8.42e-01 0.0197 0.0988 0.281 ncMono L2
ENSG00000112339 HBS1L -787555 sc-eQTL 5.36e-01 -0.056 0.0904 0.281 ncMono L2
ENSG00000118515 SGK1 -2611 sc-eQTL 3.85e-03 -0.183 0.0625 0.281 ncMono L2
ENSG00000286887 AL355881.1 19200 sc-eQTL 1.09e-03 -0.272 0.0821 0.281 ncMono L2
ENSG00000028839 TBPL1 363331 sc-eQTL 3.85e-01 -0.102 0.116 0.28 pDC L2
ENSG00000112339 HBS1L -787555 sc-eQTL 6.80e-01 -0.0394 0.0954 0.28 pDC L2
ENSG00000118513 MYB -865807 sc-eQTL 4.72e-01 -0.0593 0.0821 0.28 pDC L2
ENSG00000118515 SGK1 -2611 sc-eQTL 2.85e-01 -0.0709 0.0661 0.28 pDC L2
ENSG00000286887 AL355881.1 19200 sc-eQTL 1.89e-01 -0.108 0.0816 0.28 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 363331 sc-eQTL 9.54e-01 -0.00571 0.0998 0.28 B_Memory LOneK1K
ENSG00000112339 HBS1L -787555 sc-eQTL 7.38e-01 0.028 0.0835 0.28 B_Memory LOneK1K
ENSG00000118515 SGK1 -2611 sc-eQTL 2.96e-03 -0.228 0.0758 0.28 B_Memory LOneK1K
ENSG00000028839 TBPL1 363331 sc-eQTL 4.22e-01 -0.0751 0.0933 0.28 B_Naive LOneK1K
ENSG00000112339 HBS1L -787555 sc-eQTL 4.84e-01 0.0538 0.0768 0.28 B_Naive LOneK1K
ENSG00000118515 SGK1 -2611 sc-eQTL 2.53e-02 -0.171 0.0757 0.28 B_Naive LOneK1K
ENSG00000028839 TBPL1 363331 sc-eQTL 4.70e-01 0.0535 0.0739 0.28 CD14_Mono LOneK1K
ENSG00000112339 HBS1L -787555 sc-eQTL 1.30e-01 0.109 0.0719 0.28 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -2611 sc-eQTL 4.56e-06 -0.242 0.0514 0.28 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 19200 sc-eQTL 2.69e-06 -0.339 0.0703 0.28 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 363331 sc-eQTL 4.97e-01 0.0655 0.0962 0.28 CD16_Mono LOneK1K
ENSG00000112339 HBS1L -787555 sc-eQTL 9.46e-01 0.00598 0.0874 0.28 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -2611 sc-eQTL 2.05e-04 -0.205 0.0542 0.28 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 19200 sc-eQTL 3.03e-02 -0.175 0.0804 0.28 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 363331 sc-eQTL 9.40e-01 -0.00576 0.0769 0.282 NK_CD56dim LOneK1K
ENSG00000112339 HBS1L -787555 sc-eQTL 9.01e-01 0.00857 0.0687 0.282 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -2611 sc-eQTL 1.97e-01 -0.0994 0.0768 0.282 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000118515 SGK1 -2611 eQTL 0.00394 -0.0725 0.0251 0.00296 0.00145 0.276
ENSG00000220378 KRT8P42 16806 eQTL 0.00654 -0.0911 0.0334 0.00298 0.00134 0.276

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000118515 SGK1 -2611 0.000292 0.000329 4.52e-05 9.08e-05 3.92e-05 0.000106 0.000258 3.28e-05 0.000222 9.59e-05 0.000272 0.000129 0.00034 9.93e-05 3.96e-05 0.000183 0.000107 0.000141 5.24e-05 4.13e-05 0.000111 0.00026 0.000219 6.62e-05 0.000292 7.08e-05 0.000119 8.36e-05 0.00021 9.32e-05 0.000155 7.56e-06 1.18e-05 3.5e-05 5.34e-05 2.85e-05 1.23e-05 1.35e-05 2.28e-05 1.16e-05 9.65e-06 0.000342 2.93e-05 7.5e-07 1.84e-05 2.48e-05 2.57e-05 9.7e-06 7.02e-06