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Genes within 1Mb (chr6:134292794:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 340624 sc-eQTL 2.61e-01 -0.166 0.147 0.09 B L1
ENSG00000112339 HBS1L -810262 sc-eQTL 3.46e-01 -0.0852 0.0902 0.09 B L1
ENSG00000118515 SGK1 -25318 sc-eQTL 9.42e-01 0.00755 0.103 0.09 B L1
ENSG00000028839 TBPL1 340624 sc-eQTL 5.73e-01 0.0615 0.109 0.09 CD4T L1
ENSG00000112339 HBS1L -810262 sc-eQTL 7.32e-02 -0.141 0.0783 0.09 CD4T L1
ENSG00000118513 MYB -888514 sc-eQTL 9.82e-01 0.00202 0.0873 0.09 CD4T L1
ENSG00000118515 SGK1 -25318 sc-eQTL 1.21e-01 0.139 0.0891 0.09 CD4T L1
ENSG00000028839 TBPL1 340624 sc-eQTL 6.13e-01 -0.0541 0.107 0.09 CD8T L1
ENSG00000112339 HBS1L -810262 sc-eQTL 8.77e-01 0.0142 0.0921 0.09 CD8T L1
ENSG00000118513 MYB -888514 sc-eQTL 2.51e-01 0.117 0.102 0.09 CD8T L1
ENSG00000118515 SGK1 -25318 sc-eQTL 4.03e-01 0.0574 0.0684 0.09 CD8T L1
ENSG00000028839 TBPL1 340624 sc-eQTL 2.59e-01 0.189 0.167 0.09 DC L1
ENSG00000112339 HBS1L -810262 sc-eQTL 2.95e-03 -0.431 0.143 0.09 DC L1
ENSG00000118513 MYB -888514 sc-eQTL 7.04e-01 0.0404 0.106 0.09 DC L1
ENSG00000118515 SGK1 -25318 sc-eQTL 4.45e-01 -0.0741 0.0969 0.09 DC L1
ENSG00000286887 AL355881.1 -3507 sc-eQTL 9.40e-01 0.0113 0.15 0.09 DC L1
ENSG00000028839 TBPL1 340624 sc-eQTL 7.45e-01 0.0376 0.116 0.09 Mono L1
ENSG00000112339 HBS1L -810262 sc-eQTL 7.44e-01 0.0375 0.115 0.09 Mono L1
ENSG00000118515 SGK1 -25318 sc-eQTL 3.41e-01 0.0812 0.0851 0.09 Mono L1
ENSG00000286887 AL355881.1 -3507 sc-eQTL 1.30e-01 0.177 0.117 0.09 Mono L1
ENSG00000028839 TBPL1 340624 sc-eQTL 7.79e-01 0.0348 0.124 0.09 NK L1
ENSG00000112339 HBS1L -810262 sc-eQTL 6.88e-01 -0.0407 0.101 0.09 NK L1
ENSG00000118515 SGK1 -25318 sc-eQTL 6.57e-01 -0.0485 0.109 0.09 NK L1
ENSG00000028839 TBPL1 340624 sc-eQTL 7.00e-01 -0.0586 0.152 0.09 Other_T L1
ENSG00000112339 HBS1L -810262 sc-eQTL 5.47e-01 -0.0607 0.101 0.09 Other_T L1
ENSG00000118515 SGK1 -25318 sc-eQTL 5.98e-01 0.0558 0.106 0.09 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 340624 sc-eQTL 1.11e-01 -0.266 0.166 0.099 B_Activated L2
ENSG00000112339 HBS1L -810262 sc-eQTL 4.85e-02 -0.341 0.172 0.099 B_Activated L2
ENSG00000118515 SGK1 -25318 sc-eQTL 8.65e-01 -0.0247 0.146 0.099 B_Activated L2
ENSG00000028839 TBPL1 340624 sc-eQTL 6.43e-01 -0.0756 0.163 0.09 B_Intermediate L2
ENSG00000112339 HBS1L -810262 sc-eQTL 7.78e-01 0.0407 0.144 0.09 B_Intermediate L2
ENSG00000118515 SGK1 -25318 sc-eQTL 5.10e-01 0.0984 0.149 0.09 B_Intermediate L2
ENSG00000028839 TBPL1 340624 sc-eQTL 8.06e-01 -0.0382 0.156 0.091 B_Memory L2
ENSG00000112339 HBS1L -810262 sc-eQTL 8.87e-01 -0.02 0.14 0.091 B_Memory L2
ENSG00000118515 SGK1 -25318 sc-eQTL 1.06e-01 -0.21 0.129 0.091 B_Memory L2
ENSG00000028839 TBPL1 340624 sc-eQTL 7.58e-01 -0.045 0.146 0.09 B_Naive1 L2
ENSG00000112339 HBS1L -810262 sc-eQTL 6.48e-01 -0.058 0.127 0.09 B_Naive1 L2
ENSG00000118515 SGK1 -25318 sc-eQTL 8.38e-01 0.0249 0.122 0.09 B_Naive1 L2
ENSG00000028839 TBPL1 340624 sc-eQTL 1.17e-01 -0.245 0.156 0.09 B_Naive2 L2
ENSG00000112339 HBS1L -810262 sc-eQTL 3.75e-01 -0.128 0.144 0.09 B_Naive2 L2
ENSG00000118515 SGK1 -25318 sc-eQTL 7.37e-01 0.0481 0.143 0.09 B_Naive2 L2
ENSG00000028839 TBPL1 340624 sc-eQTL 9.52e-01 -0.00973 0.161 0.086 CD4_CTL L2
ENSG00000112339 HBS1L -810262 sc-eQTL 8.36e-01 -0.0342 0.165 0.086 CD4_CTL L2
ENSG00000118513 MYB -888514 sc-eQTL 2.83e-02 0.244 0.11 0.086 CD4_CTL L2
ENSG00000118515 SGK1 -25318 sc-eQTL 6.61e-01 0.0568 0.129 0.086 CD4_CTL L2
ENSG00000028839 TBPL1 340624 sc-eQTL 5.82e-01 0.0682 0.124 0.09 CD4_Naive L2
ENSG00000112339 HBS1L -810262 sc-eQTL 1.29e-01 -0.131 0.0859 0.09 CD4_Naive L2
ENSG00000118513 MYB -888514 sc-eQTL 5.35e-01 0.0564 0.0908 0.09 CD4_Naive L2
ENSG00000118515 SGK1 -25318 sc-eQTL 2.81e-01 0.0962 0.0891 0.09 CD4_Naive L2
ENSG00000028839 TBPL1 340624 sc-eQTL 8.63e-01 0.0232 0.134 0.09 CD4_TCM L2
ENSG00000112339 HBS1L -810262 sc-eQTL 2.30e-01 -0.13 0.108 0.09 CD4_TCM L2
ENSG00000118513 MYB -888514 sc-eQTL 7.61e-02 0.187 0.105 0.09 CD4_TCM L2
ENSG00000118515 SGK1 -25318 sc-eQTL 5.73e-02 0.183 0.0957 0.09 CD4_TCM L2
ENSG00000028839 TBPL1 340624 sc-eQTL 3.74e-01 0.137 0.153 0.09 CD4_TEM L2
ENSG00000112339 HBS1L -810262 sc-eQTL 7.82e-01 0.0359 0.13 0.09 CD4_TEM L2
ENSG00000118513 MYB -888514 sc-eQTL 5.92e-01 0.0612 0.114 0.09 CD4_TEM L2
ENSG00000118515 SGK1 -25318 sc-eQTL 4.01e-01 0.0874 0.104 0.09 CD4_TEM L2
ENSG00000028839 TBPL1 340624 sc-eQTL 4.34e-01 0.113 0.144 0.09 CD8_CTL L2
ENSG00000112339 HBS1L -810262 sc-eQTL 5.87e-01 -0.0732 0.135 0.09 CD8_CTL L2
ENSG00000118513 MYB -888514 sc-eQTL 9.43e-01 0.00846 0.119 0.09 CD8_CTL L2
ENSG00000118515 SGK1 -25318 sc-eQTL 9.41e-01 0.0102 0.138 0.09 CD8_CTL L2
ENSG00000028839 TBPL1 340624 sc-eQTL 7.45e-01 0.0475 0.146 0.09 CD8_Naive L2
ENSG00000112339 HBS1L -810262 sc-eQTL 6.80e-01 0.0477 0.116 0.09 CD8_Naive L2
ENSG00000118513 MYB -888514 sc-eQTL 2.58e-01 0.123 0.108 0.09 CD8_Naive L2
ENSG00000118515 SGK1 -25318 sc-eQTL 1.61e-01 0.135 0.0959 0.09 CD8_Naive L2
ENSG00000028839 TBPL1 340624 sc-eQTL 6.18e-01 -0.082 0.164 0.09 CD8_TCM L2
ENSG00000112339 HBS1L -810262 sc-eQTL 8.00e-01 0.0358 0.141 0.09 CD8_TCM L2
ENSG00000118513 MYB -888514 sc-eQTL 4.08e-01 -0.11 0.132 0.09 CD8_TCM L2
ENSG00000118515 SGK1 -25318 sc-eQTL 2.31e-01 0.146 0.122 0.09 CD8_TCM L2
ENSG00000028839 TBPL1 340624 sc-eQTL 9.45e-01 0.0109 0.158 0.087 CD8_TEM L2
ENSG00000112339 HBS1L -810262 sc-eQTL 9.31e-02 0.272 0.161 0.087 CD8_TEM L2
ENSG00000118513 MYB -888514 sc-eQTL 4.75e-01 -0.0923 0.129 0.087 CD8_TEM L2
ENSG00000118515 SGK1 -25318 sc-eQTL 8.33e-01 -0.0319 0.151 0.087 CD8_TEM L2
ENSG00000028839 TBPL1 340624 sc-eQTL 5.73e-01 0.0895 0.158 0.091 MAIT L2
ENSG00000112339 HBS1L -810262 sc-eQTL 3.00e-01 -0.149 0.143 0.091 MAIT L2
ENSG00000118515 SGK1 -25318 sc-eQTL 6.20e-01 -0.0526 0.106 0.091 MAIT L2
ENSG00000028839 TBPL1 340624 sc-eQTL 3.55e-01 0.153 0.165 0.091 NK_CD56bright L2
ENSG00000112339 HBS1L -810262 sc-eQTL 1.80e-01 -0.193 0.144 0.091 NK_CD56bright L2
ENSG00000118515 SGK1 -25318 sc-eQTL 6.33e-01 -0.0621 0.13 0.091 NK_CD56bright L2
ENSG00000028839 TBPL1 340624 sc-eQTL 3.91e-01 0.114 0.133 0.091 NK_CD56dim L2
ENSG00000112339 HBS1L -810262 sc-eQTL 8.23e-01 -0.0273 0.122 0.091 NK_CD56dim L2
ENSG00000118515 SGK1 -25318 sc-eQTL 9.53e-01 -0.00783 0.134 0.091 NK_CD56dim L2
ENSG00000028839 TBPL1 340624 sc-eQTL 8.18e-01 0.0379 0.164 0.091 NK_HLA L2
ENSG00000112339 HBS1L -810262 sc-eQTL 7.99e-01 -0.0386 0.151 0.091 NK_HLA L2
ENSG00000118515 SGK1 -25318 sc-eQTL 6.15e-01 0.0702 0.139 0.091 NK_HLA L2
ENSG00000028839 TBPL1 340624 sc-eQTL 4.90e-01 -0.0947 0.137 0.091 NK_cytokine L2
ENSG00000112339 HBS1L -810262 sc-eQTL 6.96e-01 -0.0522 0.133 0.091 NK_cytokine L2
ENSG00000118515 SGK1 -25318 sc-eQTL 9.68e-01 0.00536 0.135 0.091 NK_cytokine L2
ENSG00000028839 TBPL1 340624 sc-eQTL 5.64e-01 -0.119 0.206 0.081 PB L2
ENSG00000112339 HBS1L -810262 sc-eQTL 9.30e-01 -0.0144 0.163 0.081 PB L2
ENSG00000118515 SGK1 -25318 sc-eQTL 3.30e-01 0.16 0.164 0.081 PB L2
ENSG00000028839 TBPL1 340624 sc-eQTL 2.32e-01 -0.191 0.159 0.089 Pro_T L2
ENSG00000112339 HBS1L -810262 sc-eQTL 1.48e-01 -0.183 0.126 0.089 Pro_T L2
ENSG00000118515 SGK1 -25318 sc-eQTL 5.65e-01 -0.0667 0.116 0.089 Pro_T L2
ENSG00000028839 TBPL1 340624 sc-eQTL 1.27e-01 -0.243 0.158 0.09 Treg L2
ENSG00000112339 HBS1L -810262 sc-eQTL 9.07e-01 0.0161 0.138 0.09 Treg L2
ENSG00000118513 MYB -888514 sc-eQTL 3.40e-01 -0.114 0.119 0.09 Treg L2
ENSG00000118515 SGK1 -25318 sc-eQTL 8.53e-01 0.0219 0.118 0.09 Treg L2
ENSG00000028839 TBPL1 340624 sc-eQTL 9.39e-01 0.0125 0.164 0.095 cDC L2
ENSG00000112339 HBS1L -810262 sc-eQTL 3.81e-02 -0.337 0.161 0.095 cDC L2
ENSG00000118513 MYB -888514 sc-eQTL 1.09e-02 0.298 0.116 0.095 cDC L2
ENSG00000118515 SGK1 -25318 sc-eQTL 3.87e-01 -0.106 0.122 0.095 cDC L2
ENSG00000286887 AL355881.1 -3507 sc-eQTL 7.06e-01 -0.0533 0.141 0.095 cDC L2
ENSG00000028839 TBPL1 340624 sc-eQTL 1.92e-01 0.17 0.13 0.09 cMono_IL1B L2
ENSG00000112339 HBS1L -810262 sc-eQTL 2.97e-01 0.133 0.127 0.09 cMono_IL1B L2
ENSG00000118515 SGK1 -25318 sc-eQTL 1.83e-01 0.124 0.0932 0.09 cMono_IL1B L2
ENSG00000286887 AL355881.1 -3507 sc-eQTL 2.56e-01 0.143 0.126 0.09 cMono_IL1B L2
ENSG00000028839 TBPL1 340624 sc-eQTL 1.63e-01 -0.207 0.148 0.09 cMono_S100A L2
ENSG00000112339 HBS1L -810262 sc-eQTL 6.30e-01 -0.0671 0.139 0.09 cMono_S100A L2
ENSG00000118515 SGK1 -25318 sc-eQTL 1.05e-01 0.127 0.078 0.09 cMono_S100A L2
ENSG00000286887 AL355881.1 -3507 sc-eQTL 4.58e-02 0.247 0.123 0.09 cMono_S100A L2
ENSG00000028839 TBPL1 340624 sc-eQTL 2.97e-01 0.214 0.205 0.094 gdT L2
ENSG00000112339 HBS1L -810262 sc-eQTL 8.26e-01 0.04 0.181 0.094 gdT L2
ENSG00000118515 SGK1 -25318 sc-eQTL 4.17e-01 0.114 0.14 0.094 gdT L2
ENSG00000028839 TBPL1 340624 sc-eQTL 2.98e-01 0.157 0.151 0.091 intMono L2
ENSG00000112339 HBS1L -810262 sc-eQTL 4.29e-01 -0.126 0.159 0.091 intMono L2
ENSG00000118515 SGK1 -25318 sc-eQTL 2.61e-01 0.12 0.107 0.091 intMono L2
ENSG00000286887 AL355881.1 -3507 sc-eQTL 7.41e-01 -0.0492 0.149 0.091 intMono L2
ENSG00000028839 TBPL1 340624 sc-eQTL 3.94e-01 0.14 0.164 0.086 ncMono L2
ENSG00000112339 HBS1L -810262 sc-eQTL 7.69e-01 -0.0441 0.15 0.086 ncMono L2
ENSG00000118515 SGK1 -25318 sc-eQTL 1.52e-01 -0.152 0.105 0.086 ncMono L2
ENSG00000286887 AL355881.1 -3507 sc-eQTL 3.67e-01 0.126 0.14 0.086 ncMono L2
ENSG00000028839 TBPL1 340624 sc-eQTL 1.11e-01 0.307 0.191 0.088 pDC L2
ENSG00000112339 HBS1L -810262 sc-eQTL 9.42e-02 -0.263 0.156 0.088 pDC L2
ENSG00000118513 MYB -888514 sc-eQTL 6.81e-01 -0.0561 0.136 0.088 pDC L2
ENSG00000118515 SGK1 -25318 sc-eQTL 3.66e-01 -0.0991 0.109 0.088 pDC L2
ENSG00000286887 AL355881.1 -3507 sc-eQTL 3.59e-02 0.283 0.134 0.088 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 340624 sc-eQTL 5.38e-01 -0.0965 0.156 0.09 B_Memory LOneK1K
ENSG00000112339 HBS1L -810262 sc-eQTL 7.11e-01 0.0487 0.131 0.09 B_Memory LOneK1K
ENSG00000118515 SGK1 -25318 sc-eQTL 4.41e-01 -0.0936 0.121 0.09 B_Memory LOneK1K
ENSG00000028839 TBPL1 340624 sc-eQTL 1.40e-01 -0.216 0.146 0.09 B_Naive LOneK1K
ENSG00000112339 HBS1L -810262 sc-eQTL 4.77e-01 -0.0857 0.12 0.09 B_Naive LOneK1K
ENSG00000118515 SGK1 -25318 sc-eQTL 9.93e-01 -0.00105 0.12 0.09 B_Naive LOneK1K
ENSG00000028839 TBPL1 340624 sc-eQTL 9.16e-01 -0.0127 0.119 0.09 CD14_Mono LOneK1K
ENSG00000112339 HBS1L -810262 sc-eQTL 6.33e-01 0.0557 0.116 0.09 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -25318 sc-eQTL 1.53e-01 0.124 0.0866 0.09 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -3507 sc-eQTL 1.39e-01 0.176 0.119 0.09 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 340624 sc-eQTL 3.21e-01 0.153 0.153 0.091 CD16_Mono LOneK1K
ENSG00000112339 HBS1L -810262 sc-eQTL 2.46e-01 -0.162 0.139 0.091 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -25318 sc-eQTL 5.14e-01 -0.0585 0.0895 0.091 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -3507 sc-eQTL 4.46e-01 0.099 0.13 0.091 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 340624 sc-eQTL 5.42e-01 0.0746 0.122 0.091 NK_CD56dim LOneK1K
ENSG00000112339 HBS1L -810262 sc-eQTL 9.74e-01 -0.00362 0.109 0.091 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -25318 sc-eQTL 8.71e-01 0.02 0.123 0.091 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000220378 KRT8P42 -5901 eQTL 0.0575 0.0961 0.0505 0.00108 0.0 0.102

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina