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Genes within 1Mb (chr6:134161978:A:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 209808 sc-eQTL 1.48e-02 0.224 0.0913 0.69 B L1
ENSG00000112339 HBS1L -941078 sc-eQTL 6.80e-01 0.0234 0.0567 0.69 B L1
ENSG00000118515 SGK1 -156134 sc-eQTL 9.75e-01 -0.00206 0.0646 0.69 B L1
ENSG00000028839 TBPL1 209808 sc-eQTL 1.69e-01 0.0939 0.068 0.69 CD4T L1
ENSG00000112339 HBS1L -941078 sc-eQTL 6.73e-01 0.0209 0.0495 0.69 CD4T L1
ENSG00000118515 SGK1 -156134 sc-eQTL 8.05e-01 -0.0139 0.0562 0.69 CD4T L1
ENSG00000028839 TBPL1 209808 sc-eQTL 3.83e-01 0.0582 0.0666 0.69 CD8T L1
ENSG00000112339 HBS1L -941078 sc-eQTL 9.53e-01 0.00343 0.0576 0.69 CD8T L1
ENSG00000118515 SGK1 -156134 sc-eQTL 5.14e-01 0.028 0.0428 0.69 CD8T L1
ENSG00000028839 TBPL1 209808 sc-eQTL 4.98e-01 0.0687 0.101 0.687 DC L1
ENSG00000112339 HBS1L -941078 sc-eQTL 9.24e-01 0.00844 0.0883 0.687 DC L1
ENSG00000118515 SGK1 -156134 sc-eQTL 7.14e-02 0.105 0.0581 0.687 DC L1
ENSG00000286887 AL355881.1 -134323 sc-eQTL 4.37e-01 0.0705 0.0905 0.687 DC L1
ENSG00000028839 TBPL1 209808 sc-eQTL 8.64e-01 -0.0123 0.0719 0.69 Mono L1
ENSG00000112339 HBS1L -941078 sc-eQTL 9.07e-02 0.12 0.0709 0.69 Mono L1
ENSG00000118515 SGK1 -156134 sc-eQTL 1.19e-01 0.0826 0.0528 0.69 Mono L1
ENSG00000286887 AL355881.1 -134323 sc-eQTL 6.39e-01 -0.0344 0.0731 0.69 Mono L1
ENSG00000028839 TBPL1 209808 sc-eQTL 1.71e-01 0.106 0.0771 0.691 NK L1
ENSG00000112339 HBS1L -941078 sc-eQTL 4.01e-01 -0.0533 0.0633 0.691 NK L1
ENSG00000118515 SGK1 -156134 sc-eQTL 3.00e-01 0.0706 0.068 0.691 NK L1
ENSG00000028839 TBPL1 209808 sc-eQTL 1.10e-01 0.149 0.0927 0.69 Other_T L1
ENSG00000112339 HBS1L -941078 sc-eQTL 2.55e-01 0.0702 0.0615 0.69 Other_T L1
ENSG00000118515 SGK1 -156134 sc-eQTL 4.74e-01 0.0464 0.0647 0.69 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 209808 sc-eQTL 4.33e-01 0.0841 0.107 0.681 B_Activated L2
ENSG00000112339 HBS1L -941078 sc-eQTL 8.46e-01 -0.0218 0.111 0.681 B_Activated L2
ENSG00000118515 SGK1 -156134 sc-eQTL 1.62e-01 0.13 0.0928 0.681 B_Activated L2
ENSG00000028839 TBPL1 209808 sc-eQTL 9.83e-01 0.00222 0.102 0.691 B_Intermediate L2
ENSG00000112339 HBS1L -941078 sc-eQTL 6.55e-02 0.166 0.0895 0.691 B_Intermediate L2
ENSG00000118515 SGK1 -156134 sc-eQTL 5.71e-03 -0.256 0.0918 0.691 B_Intermediate L2
ENSG00000028839 TBPL1 209808 sc-eQTL 8.58e-01 0.0173 0.097 0.69 B_Memory L2
ENSG00000112339 HBS1L -941078 sc-eQTL 3.95e-01 0.0744 0.0872 0.69 B_Memory L2
ENSG00000118515 SGK1 -156134 sc-eQTL 5.67e-01 -0.0464 0.0811 0.69 B_Memory L2
ENSG00000028839 TBPL1 209808 sc-eQTL 4.17e-01 0.0751 0.0923 0.69 B_Naive1 L2
ENSG00000112339 HBS1L -941078 sc-eQTL 5.01e-01 -0.0541 0.0803 0.69 B_Naive1 L2
ENSG00000118515 SGK1 -156134 sc-eQTL 4.05e-01 0.0641 0.0768 0.69 B_Naive1 L2
ENSG00000028839 TBPL1 209808 sc-eQTL 7.09e-02 0.177 0.0972 0.691 B_Naive2 L2
ENSG00000112339 HBS1L -941078 sc-eQTL 4.30e-01 -0.0712 0.0901 0.691 B_Naive2 L2
ENSG00000118515 SGK1 -156134 sc-eQTL 4.45e-01 -0.0683 0.0893 0.691 B_Naive2 L2
ENSG00000028839 TBPL1 209808 sc-eQTL 8.88e-01 0.0134 0.095 0.686 CD4_CTL L2
ENSG00000112339 HBS1L -941078 sc-eQTL 7.73e-01 0.0282 0.0974 0.686 CD4_CTL L2
ENSG00000118515 SGK1 -156134 sc-eQTL 1.22e-01 -0.118 0.0758 0.686 CD4_CTL L2
ENSG00000028839 TBPL1 209808 sc-eQTL 6.20e-02 0.145 0.0773 0.69 CD4_Naive L2
ENSG00000112339 HBS1L -941078 sc-eQTL 4.38e-01 0.0422 0.0543 0.69 CD4_Naive L2
ENSG00000118515 SGK1 -156134 sc-eQTL 8.26e-01 -0.0124 0.0562 0.69 CD4_Naive L2
ENSG00000028839 TBPL1 209808 sc-eQTL 9.39e-01 -0.00638 0.0836 0.69 CD4_TCM L2
ENSG00000112339 HBS1L -941078 sc-eQTL 8.21e-01 -0.0154 0.0676 0.69 CD4_TCM L2
ENSG00000118515 SGK1 -156134 sc-eQTL 8.30e-01 0.0129 0.0601 0.69 CD4_TCM L2
ENSG00000028839 TBPL1 209808 sc-eQTL 6.22e-01 -0.0474 0.096 0.69 CD4_TEM L2
ENSG00000112339 HBS1L -941078 sc-eQTL 3.01e-01 -0.0839 0.081 0.69 CD4_TEM L2
ENSG00000118515 SGK1 -156134 sc-eQTL 6.53e-01 0.0293 0.065 0.69 CD4_TEM L2
ENSG00000028839 TBPL1 209808 sc-eQTL 7.98e-01 0.022 0.0859 0.69 CD8_CTL L2
ENSG00000112339 HBS1L -941078 sc-eQTL 1.08e-01 0.129 0.08 0.69 CD8_CTL L2
ENSG00000118515 SGK1 -156134 sc-eQTL 9.54e-01 -0.00473 0.0824 0.69 CD8_CTL L2
ENSG00000028839 TBPL1 209808 sc-eQTL 4.99e-01 0.0612 0.0905 0.69 CD8_Naive L2
ENSG00000112339 HBS1L -941078 sc-eQTL 4.16e-01 -0.0585 0.0717 0.69 CD8_Naive L2
ENSG00000118515 SGK1 -156134 sc-eQTL 5.33e-01 -0.0373 0.0598 0.69 CD8_Naive L2
ENSG00000028839 TBPL1 209808 sc-eQTL 1.57e-02 -0.248 0.102 0.692 CD8_TCM L2
ENSG00000112339 HBS1L -941078 sc-eQTL 6.92e-01 -0.035 0.0883 0.692 CD8_TCM L2
ENSG00000118515 SGK1 -156134 sc-eQTL 8.11e-01 0.0183 0.0765 0.692 CD8_TCM L2
ENSG00000028839 TBPL1 209808 sc-eQTL 6.01e-01 -0.0482 0.0921 0.696 CD8_TEM L2
ENSG00000112339 HBS1L -941078 sc-eQTL 7.13e-01 -0.035 0.0948 0.696 CD8_TEM L2
ENSG00000118515 SGK1 -156134 sc-eQTL 1.92e-01 0.115 0.0878 0.696 CD8_TEM L2
ENSG00000028839 TBPL1 209808 sc-eQTL 1.35e-01 0.144 0.0961 0.69 MAIT L2
ENSG00000112339 HBS1L -941078 sc-eQTL 6.35e-01 0.0416 0.0875 0.69 MAIT L2
ENSG00000118515 SGK1 -156134 sc-eQTL 6.21e-01 -0.032 0.0646 0.69 MAIT L2
ENSG00000028839 TBPL1 209808 sc-eQTL 1.43e-03 0.327 0.101 0.691 NK_CD56bright L2
ENSG00000112339 HBS1L -941078 sc-eQTL 4.46e-02 0.181 0.0897 0.691 NK_CD56bright L2
ENSG00000118515 SGK1 -156134 sc-eQTL 1.74e-01 0.111 0.081 0.691 NK_CD56bright L2
ENSG00000028839 TBPL1 209808 sc-eQTL 5.11e-01 0.0552 0.0838 0.69 NK_CD56dim L2
ENSG00000112339 HBS1L -941078 sc-eQTL 3.95e-01 -0.0653 0.0767 0.69 NK_CD56dim L2
ENSG00000118515 SGK1 -156134 sc-eQTL 3.01e-01 0.0873 0.0842 0.69 NK_CD56dim L2
ENSG00000028839 TBPL1 209808 sc-eQTL 9.58e-02 0.173 0.104 0.689 NK_HLA L2
ENSG00000112339 HBS1L -941078 sc-eQTL 4.80e-01 -0.068 0.096 0.689 NK_HLA L2
ENSG00000118515 SGK1 -156134 sc-eQTL 1.43e-01 -0.13 0.088 0.689 NK_HLA L2
ENSG00000028839 TBPL1 209808 sc-eQTL 6.92e-01 0.0339 0.0853 0.69 NK_cytokine L2
ENSG00000112339 HBS1L -941078 sc-eQTL 1.58e-01 -0.117 0.0825 0.69 NK_cytokine L2
ENSG00000118515 SGK1 -156134 sc-eQTL 9.16e-01 -0.00881 0.0839 0.69 NK_cytokine L2
ENSG00000028839 TBPL1 209808 sc-eQTL 2.03e-01 0.154 0.12 0.656 PB L2
ENSG00000112339 HBS1L -941078 sc-eQTL 8.86e-01 -0.0137 0.0958 0.656 PB L2
ENSG00000118515 SGK1 -156134 sc-eQTL 7.83e-01 -0.0266 0.0965 0.656 PB L2
ENSG00000028839 TBPL1 209808 sc-eQTL 7.68e-02 0.171 0.0962 0.689 Pro_T L2
ENSG00000112339 HBS1L -941078 sc-eQTL 5.14e-01 0.0502 0.0768 0.689 Pro_T L2
ENSG00000118515 SGK1 -156134 sc-eQTL 9.99e-01 0.000107 0.0704 0.689 Pro_T L2
ENSG00000028839 TBPL1 209808 sc-eQTL 9.82e-01 -0.00232 0.1 0.69 Treg L2
ENSG00000112339 HBS1L -941078 sc-eQTL 3.69e-01 -0.0778 0.0864 0.69 Treg L2
ENSG00000118515 SGK1 -156134 sc-eQTL 5.94e-01 0.0395 0.0739 0.69 Treg L2
ENSG00000028839 TBPL1 209808 sc-eQTL 9.51e-01 -0.0062 0.101 0.688 cDC L2
ENSG00000112339 HBS1L -941078 sc-eQTL 4.33e-02 -0.201 0.099 0.688 cDC L2
ENSG00000118515 SGK1 -156134 sc-eQTL 2.86e-02 0.163 0.0739 0.688 cDC L2
ENSG00000286887 AL355881.1 -134323 sc-eQTL 4.72e-01 0.0624 0.0865 0.688 cDC L2
ENSG00000028839 TBPL1 209808 sc-eQTL 4.65e-01 -0.0593 0.081 0.69 cMono_IL1B L2
ENSG00000112339 HBS1L -941078 sc-eQTL 1.16e-01 0.124 0.0788 0.69 cMono_IL1B L2
ENSG00000118515 SGK1 -156134 sc-eQTL 7.89e-02 0.102 0.0577 0.69 cMono_IL1B L2
ENSG00000286887 AL355881.1 -134323 sc-eQTL 9.62e-01 0.00374 0.0783 0.69 cMono_IL1B L2
ENSG00000028839 TBPL1 209808 sc-eQTL 2.65e-01 0.102 0.0915 0.69 cMono_S100A L2
ENSG00000112339 HBS1L -941078 sc-eQTL 8.03e-01 -0.0215 0.0861 0.69 cMono_S100A L2
ENSG00000118515 SGK1 -156134 sc-eQTL 9.62e-02 0.0805 0.0482 0.69 cMono_S100A L2
ENSG00000286887 AL355881.1 -134323 sc-eQTL 7.24e-01 -0.0271 0.0767 0.69 cMono_S100A L2
ENSG00000028839 TBPL1 209808 sc-eQTL 9.13e-01 -0.0143 0.13 0.715 gdT L2
ENSG00000112339 HBS1L -941078 sc-eQTL 7.95e-01 -0.0299 0.115 0.715 gdT L2
ENSG00000118515 SGK1 -156134 sc-eQTL 9.42e-01 -0.00652 0.089 0.715 gdT L2
ENSG00000028839 TBPL1 209808 sc-eQTL 8.93e-02 -0.159 0.093 0.696 intMono L2
ENSG00000112339 HBS1L -941078 sc-eQTL 7.36e-01 -0.0332 0.0983 0.696 intMono L2
ENSG00000118515 SGK1 -156134 sc-eQTL 3.42e-01 0.0631 0.0662 0.696 intMono L2
ENSG00000286887 AL355881.1 -134323 sc-eQTL 6.82e-01 0.0378 0.0919 0.696 intMono L2
ENSG00000028839 TBPL1 209808 sc-eQTL 1.48e-01 -0.142 0.0981 0.697 ncMono L2
ENSG00000112339 HBS1L -941078 sc-eQTL 6.91e-01 0.036 0.0903 0.697 ncMono L2
ENSG00000118515 SGK1 -156134 sc-eQTL 1.67e-01 0.088 0.0634 0.697 ncMono L2
ENSG00000286887 AL355881.1 -134323 sc-eQTL 6.02e-01 -0.0439 0.0841 0.697 ncMono L2
ENSG00000028839 TBPL1 209808 sc-eQTL 3.09e-01 0.117 0.114 0.701 pDC L2
ENSG00000112339 HBS1L -941078 sc-eQTL 9.47e-01 0.00624 0.0939 0.701 pDC L2
ENSG00000118515 SGK1 -156134 sc-eQTL 6.51e-01 0.0295 0.0652 0.701 pDC L2
ENSG00000286887 AL355881.1 -134323 sc-eQTL 4.44e-01 -0.0618 0.0805 0.701 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 209808 sc-eQTL 3.61e-01 0.0891 0.0974 0.69 B_Memory LOneK1K
ENSG00000112339 HBS1L -941078 sc-eQTL 5.10e-02 0.159 0.0809 0.69 B_Memory LOneK1K
ENSG00000118515 SGK1 -156134 sc-eQTL 3.12e-01 -0.0765 0.0755 0.69 B_Memory LOneK1K
ENSG00000028839 TBPL1 209808 sc-eQTL 5.94e-02 0.174 0.0916 0.69 B_Naive LOneK1K
ENSG00000112339 HBS1L -941078 sc-eQTL 3.21e-01 -0.0753 0.0758 0.69 B_Naive LOneK1K
ENSG00000118515 SGK1 -156134 sc-eQTL 6.81e-01 0.0312 0.0756 0.69 B_Naive LOneK1K
ENSG00000028839 TBPL1 209808 sc-eQTL 8.72e-01 0.012 0.0743 0.69 CD14_Mono LOneK1K
ENSG00000112339 HBS1L -941078 sc-eQTL 2.77e-01 0.0788 0.0724 0.69 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -156134 sc-eQTL 1.19e-01 0.0846 0.054 0.69 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -134323 sc-eQTL 6.62e-01 -0.0325 0.0743 0.69 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 209808 sc-eQTL 1.50e-01 -0.138 0.0957 0.69 CD16_Mono LOneK1K
ENSG00000112339 HBS1L -941078 sc-eQTL 7.79e-01 0.0246 0.0873 0.69 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -156134 sc-eQTL 3.99e-02 0.115 0.0554 0.69 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -134323 sc-eQTL 4.99e-01 -0.0549 0.0811 0.69 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 209808 sc-eQTL 2.80e-01 0.0822 0.076 0.69 NK_CD56dim LOneK1K
ENSG00000112339 HBS1L -941078 sc-eQTL 1.97e-01 -0.0878 0.0678 0.69 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -156134 sc-eQTL 5.88e-01 0.0414 0.0763 0.69 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000112339 HBS1L -941078 eQTL 0.0276 -0.0343 0.0156 0.0 0.0 0.283

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000112339 HBS1L -941078 2.67e-07 1.36e-07 3.69e-08 2.05e-07 9.91e-08 9.3e-08 1.42e-07 5.21e-08 1.41e-07 4.23e-08 1.57e-07 8.02e-08 1.41e-07 7.37e-08 5.4e-08 7.26e-08 3.9e-08 1.21e-07 5.82e-08 3.74e-08 1.04e-07 1.26e-07 1.26e-07 4.82e-08 1.31e-07 1.13e-07 1.11e-07 8.7e-08 1.02e-07 1.1e-07 9.73e-08 3.41e-08 2.74e-08 8.65e-08 8.21e-08 3.93e-08 4.85e-08 8.75e-08 8.42e-08 3.34e-08 3.71e-08 1.35e-07 4.12e-08 3.33e-08 1.12e-07 1.78e-08 1.27e-07 4.82e-09 4.72e-08