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Genes within 1Mb (chr6:133656190:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -295980 sc-eQTL 9.84e-01 0.00331 0.168 0.929 B L1
ENSG00000112303 VNN2 892731 sc-eQTL 3.15e-01 0.126 0.126 0.929 B L1
ENSG00000112306 RPS12 841621 sc-eQTL 5.52e-01 -0.0453 0.076 0.929 B L1
ENSG00000118515 SGK1 -661922 sc-eQTL 5.60e-01 -0.0684 0.117 0.929 B L1
ENSG00000146409 SLC18B1 842851 sc-eQTL 6.77e-01 -0.0667 0.16 0.929 B L1
ENSG00000028839 TBPL1 -295980 sc-eQTL 8.63e-01 -0.0214 0.124 0.929 CD4T L1
ENSG00000112303 VNN2 892731 sc-eQTL 1.28e-01 0.169 0.111 0.929 CD4T L1
ENSG00000112306 RPS12 841621 sc-eQTL 1.97e-02 -0.176 0.0748 0.929 CD4T L1
ENSG00000118515 SGK1 -661922 sc-eQTL 1.35e-01 -0.152 0.101 0.929 CD4T L1
ENSG00000146409 SLC18B1 842851 sc-eQTL 8.47e-01 -0.0296 0.153 0.929 CD4T L1
ENSG00000028839 TBPL1 -295980 sc-eQTL 9.56e-01 0.00678 0.123 0.929 CD8T L1
ENSG00000112303 VNN2 892731 sc-eQTL 7.88e-01 -0.0404 0.15 0.929 CD8T L1
ENSG00000112306 RPS12 841621 sc-eQTL 2.30e-01 -0.0614 0.0511 0.929 CD8T L1
ENSG00000118515 SGK1 -661922 sc-eQTL 9.23e-01 -0.00767 0.0789 0.929 CD8T L1
ENSG00000146409 SLC18B1 842851 sc-eQTL 1.92e-01 0.202 0.154 0.929 CD8T L1
ENSG00000028839 TBPL1 -295980 sc-eQTL 1.65e-01 -0.264 0.19 0.93 DC L1
ENSG00000093134 VNN3 921425 sc-eQTL 8.79e-01 0.0225 0.147 0.93 DC L1
ENSG00000112299 VNN1 942135 sc-eQTL 3.26e-01 -0.156 0.158 0.93 DC L1
ENSG00000112303 VNN2 892731 sc-eQTL 4.64e-01 0.124 0.17 0.93 DC L1
ENSG00000112306 RPS12 841621 sc-eQTL 8.49e-01 -0.0182 0.0952 0.93 DC L1
ENSG00000118515 SGK1 -661922 sc-eQTL 8.59e-01 0.0197 0.11 0.93 DC L1
ENSG00000146409 SLC18B1 842851 sc-eQTL 2.72e-01 0.165 0.15 0.93 DC L1
ENSG00000286438 AL591115.1 553062 sc-eQTL 8.33e-01 -0.0289 0.137 0.93 DC L1
ENSG00000286887 AL355881.1 -640111 sc-eQTL 8.51e-01 0.0321 0.171 0.93 DC L1
ENSG00000028839 TBPL1 -295980 sc-eQTL 2.22e-01 -0.16 0.131 0.929 Mono L1
ENSG00000093134 VNN3 921425 sc-eQTL 7.77e-01 -0.0428 0.151 0.929 Mono L1
ENSG00000112299 VNN1 942135 sc-eQTL 5.41e-01 -0.0991 0.162 0.929 Mono L1
ENSG00000112303 VNN2 892731 sc-eQTL 3.81e-01 -0.1 0.114 0.929 Mono L1
ENSG00000112306 RPS12 841621 sc-eQTL 6.58e-02 -0.126 0.068 0.929 Mono L1
ENSG00000118515 SGK1 -661922 sc-eQTL 2.83e-02 0.211 0.0957 0.929 Mono L1
ENSG00000146409 SLC18B1 842851 sc-eQTL 2.53e-01 -0.155 0.135 0.929 Mono L1
ENSG00000286887 AL355881.1 -640111 sc-eQTL 2.09e-01 0.167 0.133 0.929 Mono L1
ENSG00000028839 TBPL1 -295980 sc-eQTL 4.60e-01 -0.105 0.142 0.929 NK L1
ENSG00000112303 VNN2 892731 sc-eQTL 9.30e-01 0.0143 0.164 0.929 NK L1
ENSG00000112306 RPS12 841621 sc-eQTL 1.71e-01 -0.0926 0.0675 0.929 NK L1
ENSG00000118515 SGK1 -661922 sc-eQTL 6.32e-02 0.232 0.124 0.929 NK L1
ENSG00000028839 TBPL1 -295980 sc-eQTL 2.73e-01 0.187 0.17 0.929 Other_T L1
ENSG00000112303 VNN2 892731 sc-eQTL 1.87e-01 0.214 0.162 0.929 Other_T L1
ENSG00000112306 RPS12 841621 sc-eQTL 8.39e-01 0.0131 0.0643 0.929 Other_T L1
ENSG00000118515 SGK1 -661922 sc-eQTL 1.81e-01 -0.158 0.118 0.929 Other_T L1
ENSG00000146409 SLC18B1 842851 sc-eQTL 7.90e-03 -0.464 0.173 0.929 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -295980 sc-eQTL 1.21e-01 -0.314 0.202 0.934 B_Activated L2
ENSG00000112303 VNN2 892731 sc-eQTL 3.27e-01 0.181 0.185 0.934 B_Activated L2
ENSG00000112306 RPS12 841621 sc-eQTL 1.46e-01 -0.144 0.0986 0.934 B_Activated L2
ENSG00000118515 SGK1 -661922 sc-eQTL 8.84e-01 -0.0258 0.177 0.934 B_Activated L2
ENSG00000146409 SLC18B1 842851 sc-eQTL 7.06e-01 0.0657 0.174 0.934 B_Activated L2
ENSG00000028839 TBPL1 -295980 sc-eQTL 8.07e-01 0.0465 0.19 0.931 B_Intermediate L2
ENSG00000112303 VNN2 892731 sc-eQTL 7.65e-01 -0.0491 0.164 0.931 B_Intermediate L2
ENSG00000112306 RPS12 841621 sc-eQTL 5.90e-01 -0.0542 0.1 0.931 B_Intermediate L2
ENSG00000118515 SGK1 -661922 sc-eQTL 6.13e-02 0.324 0.172 0.931 B_Intermediate L2
ENSG00000146409 SLC18B1 842851 sc-eQTL 2.95e-01 -0.189 0.181 0.931 B_Intermediate L2
ENSG00000028839 TBPL1 -295980 sc-eQTL 6.01e-01 -0.0943 0.18 0.931 B_Memory L2
ENSG00000112303 VNN2 892731 sc-eQTL 1.59e-01 -0.24 0.17 0.931 B_Memory L2
ENSG00000112306 RPS12 841621 sc-eQTL 1.83e-01 -0.109 0.0818 0.931 B_Memory L2
ENSG00000118515 SGK1 -661922 sc-eQTL 6.12e-01 0.0766 0.151 0.931 B_Memory L2
ENSG00000146409 SLC18B1 842851 sc-eQTL 6.15e-01 -0.0862 0.171 0.931 B_Memory L2
ENSG00000028839 TBPL1 -295980 sc-eQTL 3.94e-01 0.146 0.171 0.929 B_Naive1 L2
ENSG00000112303 VNN2 892731 sc-eQTL 4.69e-01 0.115 0.159 0.929 B_Naive1 L2
ENSG00000112306 RPS12 841621 sc-eQTL 1.39e-01 -0.134 0.0903 0.929 B_Naive1 L2
ENSG00000118515 SGK1 -661922 sc-eQTL 2.83e-01 -0.152 0.142 0.929 B_Naive1 L2
ENSG00000146409 SLC18B1 842851 sc-eQTL 4.40e-01 0.135 0.175 0.929 B_Naive1 L2
ENSG00000028839 TBPL1 -295980 sc-eQTL 8.09e-01 -0.0437 0.181 0.929 B_Naive2 L2
ENSG00000112303 VNN2 892731 sc-eQTL 4.64e-01 0.129 0.176 0.929 B_Naive2 L2
ENSG00000112306 RPS12 841621 sc-eQTL 4.36e-01 -0.0727 0.0931 0.929 B_Naive2 L2
ENSG00000118515 SGK1 -661922 sc-eQTL 5.75e-01 0.0925 0.165 0.929 B_Naive2 L2
ENSG00000146409 SLC18B1 842851 sc-eQTL 3.39e-01 -0.17 0.177 0.929 B_Naive2 L2
ENSG00000028839 TBPL1 -295980 sc-eQTL 7.15e-02 -0.308 0.17 0.925 CD4_CTL L2
ENSG00000112303 VNN2 892731 sc-eQTL 2.28e-02 0.388 0.169 0.925 CD4_CTL L2
ENSG00000112306 RPS12 841621 sc-eQTL 7.04e-01 0.0301 0.0792 0.925 CD4_CTL L2
ENSG00000118515 SGK1 -661922 sc-eQTL 3.87e-01 0.119 0.137 0.925 CD4_CTL L2
ENSG00000146409 SLC18B1 842851 sc-eQTL 1.34e-02 -0.392 0.157 0.925 CD4_CTL L2
ENSG00000028839 TBPL1 -295980 sc-eQTL 2.46e-01 -0.164 0.141 0.929 CD4_Naive L2
ENSG00000112303 VNN2 892731 sc-eQTL 2.06e-01 0.162 0.128 0.929 CD4_Naive L2
ENSG00000112306 RPS12 841621 sc-eQTL 7.70e-02 -0.147 0.0828 0.929 CD4_Naive L2
ENSG00000118515 SGK1 -661922 sc-eQTL 2.12e-01 -0.128 0.102 0.929 CD4_Naive L2
ENSG00000146409 SLC18B1 842851 sc-eQTL 5.07e-01 0.107 0.16 0.929 CD4_Naive L2
ENSG00000028839 TBPL1 -295980 sc-eQTL 1.14e-01 0.238 0.15 0.929 CD4_TCM L2
ENSG00000112303 VNN2 892731 sc-eQTL 3.74e-01 -0.133 0.15 0.929 CD4_TCM L2
ENSG00000112306 RPS12 841621 sc-eQTL 2.13e-02 -0.178 0.0767 0.929 CD4_TCM L2
ENSG00000118515 SGK1 -661922 sc-eQTL 8.96e-01 0.0143 0.109 0.929 CD4_TCM L2
ENSG00000146409 SLC18B1 842851 sc-eQTL 9.84e-01 0.00366 0.18 0.929 CD4_TCM L2
ENSG00000028839 TBPL1 -295980 sc-eQTL 7.29e-01 0.0613 0.177 0.929 CD4_TEM L2
ENSG00000112303 VNN2 892731 sc-eQTL 2.23e-02 -0.386 0.168 0.929 CD4_TEM L2
ENSG00000112306 RPS12 841621 sc-eQTL 1.34e-01 -0.104 0.0692 0.929 CD4_TEM L2
ENSG00000118515 SGK1 -661922 sc-eQTL 8.65e-01 0.0204 0.12 0.929 CD4_TEM L2
ENSG00000146409 SLC18B1 842851 sc-eQTL 2.16e-01 -0.214 0.172 0.929 CD4_TEM L2
ENSG00000028839 TBPL1 -295980 sc-eQTL 9.40e-01 0.0121 0.16 0.929 CD8_CTL L2
ENSG00000112303 VNN2 892731 sc-eQTL 7.06e-01 -0.0641 0.169 0.929 CD8_CTL L2
ENSG00000112306 RPS12 841621 sc-eQTL 6.38e-01 -0.0427 0.0906 0.929 CD8_CTL L2
ENSG00000118515 SGK1 -661922 sc-eQTL 8.07e-02 0.267 0.152 0.929 CD8_CTL L2
ENSG00000146409 SLC18B1 842851 sc-eQTL 9.40e-01 -0.0133 0.176 0.929 CD8_CTL L2
ENSG00000028839 TBPL1 -295980 sc-eQTL 5.79e-01 0.092 0.165 0.929 CD8_Naive L2
ENSG00000112303 VNN2 892731 sc-eQTL 6.44e-01 -0.0705 0.152 0.929 CD8_Naive L2
ENSG00000112306 RPS12 841621 sc-eQTL 2.16e-01 -0.108 0.0868 0.929 CD8_Naive L2
ENSG00000118515 SGK1 -661922 sc-eQTL 7.13e-01 -0.0403 0.109 0.929 CD8_Naive L2
ENSG00000146409 SLC18B1 842851 sc-eQTL 4.17e-01 0.142 0.175 0.929 CD8_Naive L2
ENSG00000028839 TBPL1 -295980 sc-eQTL 5.27e-01 0.118 0.187 0.926 CD8_TCM L2
ENSG00000112303 VNN2 892731 sc-eQTL 4.03e-01 -0.144 0.171 0.926 CD8_TCM L2
ENSG00000112306 RPS12 841621 sc-eQTL 7.32e-01 -0.0287 0.0836 0.926 CD8_TCM L2
ENSG00000118515 SGK1 -661922 sc-eQTL 6.19e-01 0.069 0.138 0.926 CD8_TCM L2
ENSG00000146409 SLC18B1 842851 sc-eQTL 1.25e-01 0.281 0.182 0.926 CD8_TCM L2
ENSG00000028839 TBPL1 -295980 sc-eQTL 9.80e-01 0.00456 0.18 0.934 CD8_TEM L2
ENSG00000112303 VNN2 892731 sc-eQTL 4.62e-01 0.144 0.195 0.934 CD8_TEM L2
ENSG00000112306 RPS12 841621 sc-eQTL 2.13e-01 -0.131 0.105 0.934 CD8_TEM L2
ENSG00000118515 SGK1 -661922 sc-eQTL 9.15e-01 -0.0183 0.172 0.934 CD8_TEM L2
ENSG00000146409 SLC18B1 842851 sc-eQTL 5.20e-01 0.128 0.198 0.934 CD8_TEM L2
ENSG00000028839 TBPL1 -295980 sc-eQTL 2.35e-01 0.208 0.175 0.929 MAIT L2
ENSG00000112303 VNN2 892731 sc-eQTL 9.86e-02 0.279 0.168 0.929 MAIT L2
ENSG00000112306 RPS12 841621 sc-eQTL 4.21e-01 -0.0671 0.0832 0.929 MAIT L2
ENSG00000118515 SGK1 -661922 sc-eQTL 8.49e-01 -0.0223 0.117 0.929 MAIT L2
ENSG00000146409 SLC18B1 842851 sc-eQTL 5.52e-03 -0.481 0.171 0.929 MAIT L2
ENSG00000028839 TBPL1 -295980 sc-eQTL 7.98e-01 0.0478 0.186 0.927 NK_CD56bright L2
ENSG00000112303 VNN2 892731 sc-eQTL 6.52e-01 0.0792 0.175 0.927 NK_CD56bright L2
ENSG00000112306 RPS12 841621 sc-eQTL 1.74e-02 -0.231 0.0963 0.927 NK_CD56bright L2
ENSG00000118515 SGK1 -661922 sc-eQTL 1.39e-01 0.216 0.145 0.927 NK_CD56bright L2
ENSG00000028839 TBPL1 -295980 sc-eQTL 9.16e-01 -0.0162 0.153 0.929 NK_CD56dim L2
ENSG00000112303 VNN2 892731 sc-eQTL 6.69e-01 0.075 0.175 0.929 NK_CD56dim L2
ENSG00000112306 RPS12 841621 sc-eQTL 6.64e-01 -0.0302 0.0694 0.929 NK_CD56dim L2
ENSG00000118515 SGK1 -661922 sc-eQTL 5.15e-01 0.1 0.154 0.929 NK_CD56dim L2
ENSG00000028839 TBPL1 -295980 sc-eQTL 2.18e-01 -0.238 0.193 0.929 NK_HLA L2
ENSG00000112303 VNN2 892731 sc-eQTL 7.62e-01 -0.0541 0.178 0.929 NK_HLA L2
ENSG00000112306 RPS12 841621 sc-eQTL 4.04e-01 -0.0693 0.0829 0.929 NK_HLA L2
ENSG00000118515 SGK1 -661922 sc-eQTL 4.33e-01 -0.129 0.164 0.929 NK_HLA L2
ENSG00000028839 TBPL1 -295980 sc-eQTL 6.19e-01 -0.0796 0.16 0.929 NK_cytokine L2
ENSG00000112303 VNN2 892731 sc-eQTL 6.78e-01 0.0724 0.174 0.929 NK_cytokine L2
ENSG00000112306 RPS12 841621 sc-eQTL 4.43e-01 -0.0725 0.0943 0.929 NK_cytokine L2
ENSG00000118515 SGK1 -661922 sc-eQTL 4.83e-02 0.309 0.156 0.929 NK_cytokine L2
ENSG00000028839 TBPL1 -295980 sc-eQTL 4.09e-01 0.197 0.238 0.944 PB L2
ENSG00000112303 VNN2 892731 sc-eQTL 8.83e-01 0.0305 0.207 0.944 PB L2
ENSG00000112306 RPS12 841621 sc-eQTL 6.23e-01 0.058 0.118 0.944 PB L2
ENSG00000118515 SGK1 -661922 sc-eQTL 7.70e-01 0.0559 0.19 0.944 PB L2
ENSG00000146409 SLC18B1 842851 sc-eQTL 1.33e-01 -0.331 0.219 0.944 PB L2
ENSG00000028839 TBPL1 -295980 sc-eQTL 6.79e-01 -0.075 0.181 0.928 Pro_T L2
ENSG00000112303 VNN2 892731 sc-eQTL 5.46e-02 -0.333 0.172 0.928 Pro_T L2
ENSG00000112306 RPS12 841621 sc-eQTL 7.86e-01 -0.0179 0.0657 0.928 Pro_T L2
ENSG00000118515 SGK1 -661922 sc-eQTL 1.07e-01 -0.212 0.131 0.928 Pro_T L2
ENSG00000146409 SLC18B1 842851 sc-eQTL 7.68e-01 0.0501 0.17 0.928 Pro_T L2
ENSG00000028839 TBPL1 -295980 sc-eQTL 8.42e-01 0.0361 0.181 0.929 Treg L2
ENSG00000112303 VNN2 892731 sc-eQTL 6.85e-01 -0.0582 0.143 0.929 Treg L2
ENSG00000112306 RPS12 841621 sc-eQTL 1.28e-02 -0.157 0.0626 0.929 Treg L2
ENSG00000118515 SGK1 -661922 sc-eQTL 7.64e-01 -0.0402 0.134 0.929 Treg L2
ENSG00000146409 SLC18B1 842851 sc-eQTL 1.72e-01 -0.245 0.179 0.929 Treg L2
ENSG00000028839 TBPL1 -295980 sc-eQTL 4.95e-01 -0.13 0.19 0.929 cDC L2
ENSG00000093134 VNN3 921425 sc-eQTL 7.56e-01 0.0461 0.148 0.929 cDC L2
ENSG00000112299 VNN1 942135 sc-eQTL 1.17e-01 -0.272 0.173 0.929 cDC L2
ENSG00000112303 VNN2 892731 sc-eQTL 2.75e-01 0.185 0.169 0.929 cDC L2
ENSG00000112306 RPS12 841621 sc-eQTL 4.45e-01 -0.064 0.0835 0.929 cDC L2
ENSG00000118515 SGK1 -661922 sc-eQTL 5.51e-01 0.0842 0.141 0.929 cDC L2
ENSG00000146409 SLC18B1 842851 sc-eQTL 1.26e-01 0.253 0.165 0.929 cDC L2
ENSG00000286438 AL591115.1 553062 sc-eQTL 6.91e-01 0.0528 0.132 0.929 cDC L2
ENSG00000286887 AL355881.1 -640111 sc-eQTL 2.63e-01 0.182 0.162 0.929 cDC L2
ENSG00000028839 TBPL1 -295980 sc-eQTL 1.39e-01 -0.222 0.15 0.929 cMono_IL1B L2
ENSG00000093134 VNN3 921425 sc-eQTL 8.76e-01 0.0252 0.161 0.929 cMono_IL1B L2
ENSG00000112299 VNN1 942135 sc-eQTL 9.55e-01 0.00929 0.163 0.929 cMono_IL1B L2
ENSG00000112303 VNN2 892731 sc-eQTL 4.94e-01 -0.089 0.13 0.929 cMono_IL1B L2
ENSG00000112306 RPS12 841621 sc-eQTL 6.37e-02 -0.134 0.0717 0.929 cMono_IL1B L2
ENSG00000118515 SGK1 -661922 sc-eQTL 1.06e-01 0.174 0.107 0.929 cMono_IL1B L2
ENSG00000146409 SLC18B1 842851 sc-eQTL 4.03e-01 -0.117 0.139 0.929 cMono_IL1B L2
ENSG00000286887 AL355881.1 -640111 sc-eQTL 7.03e-01 0.0553 0.145 0.929 cMono_IL1B L2
ENSG00000028839 TBPL1 -295980 sc-eQTL 4.31e-01 -0.134 0.171 0.929 cMono_S100A L2
ENSG00000093134 VNN3 921425 sc-eQTL 8.50e-01 -0.0291 0.154 0.929 cMono_S100A L2
ENSG00000112299 VNN1 942135 sc-eQTL 3.25e-01 -0.165 0.167 0.929 cMono_S100A L2
ENSG00000112303 VNN2 892731 sc-eQTL 7.99e-01 -0.028 0.11 0.929 cMono_S100A L2
ENSG00000112306 RPS12 841621 sc-eQTL 2.28e-01 -0.095 0.0786 0.929 cMono_S100A L2
ENSG00000118515 SGK1 -661922 sc-eQTL 5.44e-02 0.173 0.0894 0.929 cMono_S100A L2
ENSG00000146409 SLC18B1 842851 sc-eQTL 1.85e-01 -0.194 0.145 0.929 cMono_S100A L2
ENSG00000286887 AL355881.1 -640111 sc-eQTL 5.07e-01 0.0947 0.143 0.929 cMono_S100A L2
ENSG00000028839 TBPL1 -295980 sc-eQTL 6.19e-01 -0.112 0.225 0.921 gdT L2
ENSG00000112303 VNN2 892731 sc-eQTL 8.02e-01 0.0538 0.214 0.921 gdT L2
ENSG00000112306 RPS12 841621 sc-eQTL 4.82e-01 -0.0573 0.0813 0.921 gdT L2
ENSG00000118515 SGK1 -661922 sc-eQTL 2.39e-02 0.345 0.151 0.921 gdT L2
ENSG00000146409 SLC18B1 842851 sc-eQTL 8.28e-02 -0.364 0.208 0.921 gdT L2
ENSG00000028839 TBPL1 -295980 sc-eQTL 5.00e-01 0.119 0.176 0.929 intMono L2
ENSG00000093134 VNN3 921425 sc-eQTL 3.82e-01 -0.149 0.17 0.929 intMono L2
ENSG00000112299 VNN1 942135 sc-eQTL 9.68e-01 0.00685 0.168 0.929 intMono L2
ENSG00000112303 VNN2 892731 sc-eQTL 3.51e-01 -0.159 0.17 0.929 intMono L2
ENSG00000112306 RPS12 841621 sc-eQTL 4.91e-01 -0.0512 0.0742 0.929 intMono L2
ENSG00000118515 SGK1 -661922 sc-eQTL 1.26e-02 0.31 0.123 0.929 intMono L2
ENSG00000146409 SLC18B1 842851 sc-eQTL 2.86e-01 0.193 0.18 0.929 intMono L2
ENSG00000286887 AL355881.1 -640111 sc-eQTL 4.67e-02 0.343 0.171 0.929 intMono L2
ENSG00000028839 TBPL1 -295980 sc-eQTL 3.31e-01 0.185 0.19 0.93 ncMono L2
ENSG00000093134 VNN3 921425 sc-eQTL 5.71e-02 0.345 0.18 0.93 ncMono L2
ENSG00000112299 VNN1 942135 sc-eQTL 1.58e-01 -0.254 0.179 0.93 ncMono L2
ENSG00000112303 VNN2 892731 sc-eQTL 8.06e-01 -0.0427 0.173 0.93 ncMono L2
ENSG00000112306 RPS12 841621 sc-eQTL 6.56e-01 0.0388 0.087 0.93 ncMono L2
ENSG00000118515 SGK1 -661922 sc-eQTL 1.96e-01 0.159 0.123 0.93 ncMono L2
ENSG00000146409 SLC18B1 842851 sc-eQTL 6.82e-01 0.063 0.154 0.93 ncMono L2
ENSG00000286887 AL355881.1 -640111 sc-eQTL 3.62e-01 0.148 0.162 0.93 ncMono L2
ENSG00000028839 TBPL1 -295980 sc-eQTL 7.91e-01 0.0574 0.216 0.932 pDC L2
ENSG00000093134 VNN3 921425 sc-eQTL 8.61e-01 0.0254 0.145 0.932 pDC L2
ENSG00000112299 VNN1 942135 sc-eQTL 9.83e-01 -0.0032 0.148 0.932 pDC L2
ENSG00000112303 VNN2 892731 sc-eQTL 1.71e-01 -0.24 0.175 0.932 pDC L2
ENSG00000112306 RPS12 841621 sc-eQTL 2.76e-01 -0.132 0.121 0.932 pDC L2
ENSG00000118515 SGK1 -661922 sc-eQTL 6.46e-01 0.0565 0.123 0.932 pDC L2
ENSG00000146409 SLC18B1 842851 sc-eQTL 3.79e-01 -0.158 0.179 0.932 pDC L2
ENSG00000286438 AL591115.1 553062 sc-eQTL 7.23e-01 0.0608 0.171 0.932 pDC L2
ENSG00000286887 AL355881.1 -640111 sc-eQTL 8.27e-01 -0.0332 0.152 0.932 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -295980 sc-eQTL 5.50e-01 -0.108 0.181 0.929 B_Memory LOneK1K
ENSG00000112303 VNN2 892731 sc-eQTL 7.87e-01 0.0427 0.158 0.929 B_Memory LOneK1K
ENSG00000112306 RPS12 841621 sc-eQTL 5.38e-01 -0.0554 0.0898 0.929 B_Memory LOneK1K
ENSG00000118515 SGK1 -661922 sc-eQTL 3.44e-01 0.133 0.14 0.929 B_Memory LOneK1K
ENSG00000146409 SLC18B1 842851 sc-eQTL 2.99e-01 -0.171 0.164 0.929 B_Memory LOneK1K
ENSG00000028839 TBPL1 -295980 sc-eQTL 8.68e-01 0.0281 0.169 0.929 B_Naive LOneK1K
ENSG00000112303 VNN2 892731 sc-eQTL 4.14e-01 0.121 0.148 0.929 B_Naive LOneK1K
ENSG00000112306 RPS12 841621 sc-eQTL 2.94e-01 -0.0937 0.0892 0.929 B_Naive LOneK1K
ENSG00000118515 SGK1 -661922 sc-eQTL 2.30e-01 -0.166 0.138 0.929 B_Naive LOneK1K
ENSG00000146409 SLC18B1 842851 sc-eQTL 9.00e-01 0.0211 0.169 0.929 B_Naive LOneK1K
ENSG00000028839 TBPL1 -295980 sc-eQTL 9.67e-02 -0.225 0.135 0.929 CD14_Mono LOneK1K
ENSG00000093134 VNN3 921425 sc-eQTL 9.83e-01 -0.00332 0.154 0.929 CD14_Mono LOneK1K
ENSG00000112299 VNN1 942135 sc-eQTL 7.50e-01 -0.0514 0.161 0.929 CD14_Mono LOneK1K
ENSG00000112303 VNN2 892731 sc-eQTL 3.70e-01 -0.0953 0.106 0.929 CD14_Mono LOneK1K
ENSG00000112306 RPS12 841621 sc-eQTL 8.10e-02 -0.127 0.0724 0.929 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -661922 sc-eQTL 4.81e-02 0.196 0.0984 0.929 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 842851 sc-eQTL 1.39e-01 -0.192 0.129 0.929 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -640111 sc-eQTL 4.08e-01 0.113 0.136 0.929 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -295980 sc-eQTL 3.27e-01 0.177 0.18 0.929 CD16_Mono LOneK1K
ENSG00000093134 VNN3 921425 sc-eQTL 8.69e-01 0.0288 0.175 0.929 CD16_Mono LOneK1K
ENSG00000112299 VNN1 942135 sc-eQTL 6.50e-01 -0.0788 0.173 0.929 CD16_Mono LOneK1K
ENSG00000112303 VNN2 892731 sc-eQTL 6.06e-01 -0.0845 0.163 0.929 CD16_Mono LOneK1K
ENSG00000112306 RPS12 841621 sc-eQTL 6.63e-01 0.0303 0.0694 0.929 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -661922 sc-eQTL 4.42e-02 0.211 0.104 0.929 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 842851 sc-eQTL 3.89e-01 0.145 0.168 0.929 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -640111 sc-eQTL 3.61e-02 0.318 0.151 0.929 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -295980 sc-eQTL 5.42e-01 -0.0857 0.14 0.929 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 892731 sc-eQTL 9.58e-01 0.00891 0.167 0.929 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 841621 sc-eQTL 4.36e-01 -0.0532 0.0681 0.929 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -661922 sc-eQTL 5.70e-02 0.267 0.14 0.929 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000112299 VNN1 942135 eQTL 0.041 -0.0782 0.0382 0.0 0.0 0.0913
ENSG00000220378 KRT8P42 -642505 eQTL 0.0505 0.107 0.0545 0.00128 0.0 0.0913

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000112306 \N 841621 2.8e-07 1.34e-07 5.82e-08 1.83e-07 9.8e-08 9.05e-08 1.6e-07 5.75e-08 1.47e-07 6.4e-08 1.57e-07 1.08e-07 1.59e-07 7.37e-08 6.25e-08 7.74e-08 4.18e-08 1.51e-07 6.75e-08 4.78e-08 1.25e-07 1.25e-07 1.5e-07 2.87e-08 1.55e-07 1.23e-07 1.18e-07 9.92e-08 1.22e-07 9.88e-08 1.06e-07 3.03e-08 3.43e-08 8.89e-08 4.84e-08 3.05e-08 5.45e-08 8.76e-08 6.71e-08 4.47e-08 5.03e-08 1.46e-07 5.12e-08 1.16e-08 3.42e-08 1.92e-08 1e-07 1.89e-09 4.82e-08