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Genes within 1Mb (chr6:133626569:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -325601 sc-eQTL 7.61e-01 0.0356 0.117 0.859 B L1
ENSG00000112303 VNN2 863110 sc-eQTL 2.35e-01 0.104 0.087 0.859 B L1
ENSG00000112306 RPS12 812000 sc-eQTL 6.75e-01 -0.0222 0.0528 0.859 B L1
ENSG00000118515 SGK1 -691543 sc-eQTL 5.52e-01 -0.0485 0.0813 0.859 B L1
ENSG00000146409 SLC18B1 813230 sc-eQTL 5.49e-01 -0.0666 0.111 0.859 B L1
ENSG00000028839 TBPL1 -325601 sc-eQTL 9.43e-01 0.00616 0.0857 0.859 CD4T L1
ENSG00000112303 VNN2 863110 sc-eQTL 1.82e-01 0.103 0.0769 0.859 CD4T L1
ENSG00000112306 RPS12 812000 sc-eQTL 1.17e-02 -0.132 0.0517 0.859 CD4T L1
ENSG00000118515 SGK1 -691543 sc-eQTL 2.00e-02 -0.163 0.0697 0.859 CD4T L1
ENSG00000146409 SLC18B1 813230 sc-eQTL 2.56e-01 -0.12 0.106 0.859 CD4T L1
ENSG00000028839 TBPL1 -325601 sc-eQTL 2.24e-01 0.103 0.0845 0.859 CD8T L1
ENSG00000112303 VNN2 863110 sc-eQTL 7.97e-01 0.0267 0.103 0.859 CD8T L1
ENSG00000112306 RPS12 812000 sc-eQTL 2.89e-01 -0.0374 0.0352 0.859 CD8T L1
ENSG00000118515 SGK1 -691543 sc-eQTL 4.24e-01 -0.0435 0.0544 0.859 CD8T L1
ENSG00000146409 SLC18B1 813230 sc-eQTL 1.44e-01 0.156 0.106 0.859 CD8T L1
ENSG00000028839 TBPL1 -325601 sc-eQTL 7.41e-01 0.0429 0.13 0.856 DC L1
ENSG00000093134 VNN3 891804 sc-eQTL 8.03e-01 -0.025 0.1 0.856 DC L1
ENSG00000112299 VNN1 912514 sc-eQTL 4.86e-01 -0.0753 0.108 0.856 DC L1
ENSG00000112303 VNN2 863110 sc-eQTL 3.24e-01 0.114 0.115 0.856 DC L1
ENSG00000112306 RPS12 812000 sc-eQTL 1.55e-01 -0.092 0.0645 0.856 DC L1
ENSG00000118515 SGK1 -691543 sc-eQTL 2.32e-01 0.0899 0.075 0.856 DC L1
ENSG00000146409 SLC18B1 813230 sc-eQTL 7.73e-01 -0.0297 0.103 0.856 DC L1
ENSG00000286438 AL591115.1 523441 sc-eQTL 3.12e-01 -0.0944 0.0931 0.856 DC L1
ENSG00000286887 AL355881.1 -669732 sc-eQTL 6.91e-02 0.211 0.115 0.856 DC L1
ENSG00000028839 TBPL1 -325601 sc-eQTL 6.22e-01 0.0447 0.0906 0.859 Mono L1
ENSG00000093134 VNN3 891804 sc-eQTL 1.88e-01 -0.137 0.104 0.859 Mono L1
ENSG00000112299 VNN1 912514 sc-eQTL 1.10e-01 -0.179 0.111 0.859 Mono L1
ENSG00000112303 VNN2 863110 sc-eQTL 8.50e-01 -0.015 0.079 0.859 Mono L1
ENSG00000112306 RPS12 812000 sc-eQTL 1.21e-02 -0.118 0.0467 0.859 Mono L1
ENSG00000118515 SGK1 -691543 sc-eQTL 7.22e-02 0.12 0.0664 0.859 Mono L1
ENSG00000146409 SLC18B1 813230 sc-eQTL 8.66e-01 0.0158 0.0937 0.859 Mono L1
ENSG00000286887 AL355881.1 -669732 sc-eQTL 4.71e-02 0.182 0.0912 0.859 Mono L1
ENSG00000028839 TBPL1 -325601 sc-eQTL 7.54e-01 -0.0312 0.0994 0.861 NK L1
ENSG00000112303 VNN2 863110 sc-eQTL 4.19e-01 0.0926 0.114 0.861 NK L1
ENSG00000112306 RPS12 812000 sc-eQTL 7.97e-01 -0.0122 0.0473 0.861 NK L1
ENSG00000118515 SGK1 -691543 sc-eQTL 8.62e-03 0.228 0.0861 0.861 NK L1
ENSG00000028839 TBPL1 -325601 sc-eQTL 1.17e-01 0.188 0.12 0.859 Other_T L1
ENSG00000112303 VNN2 863110 sc-eQTL 2.25e-01 0.139 0.114 0.859 Other_T L1
ENSG00000112306 RPS12 812000 sc-eQTL 6.48e-01 0.0208 0.0454 0.859 Other_T L1
ENSG00000118515 SGK1 -691543 sc-eQTL 4.04e-01 -0.0698 0.0834 0.859 Other_T L1
ENSG00000146409 SLC18B1 813230 sc-eQTL 7.42e-03 -0.33 0.122 0.859 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -325601 sc-eQTL 8.82e-01 0.02 0.134 0.862 B_Activated L2
ENSG00000112303 VNN2 863110 sc-eQTL 7.02e-01 0.0468 0.122 0.862 B_Activated L2
ENSG00000112306 RPS12 812000 sc-eQTL 9.59e-02 -0.109 0.065 0.862 B_Activated L2
ENSG00000118515 SGK1 -691543 sc-eQTL 9.42e-01 0.00858 0.117 0.862 B_Activated L2
ENSG00000146409 SLC18B1 813230 sc-eQTL 5.58e-01 0.0673 0.115 0.862 B_Activated L2
ENSG00000028839 TBPL1 -325601 sc-eQTL 8.66e-01 0.0216 0.128 0.861 B_Intermediate L2
ENSG00000112303 VNN2 863110 sc-eQTL 6.16e-01 -0.0555 0.111 0.861 B_Intermediate L2
ENSG00000112306 RPS12 812000 sc-eQTL 2.72e-01 -0.0745 0.0676 0.861 B_Intermediate L2
ENSG00000118515 SGK1 -691543 sc-eQTL 7.07e-02 0.211 0.116 0.861 B_Intermediate L2
ENSG00000146409 SLC18B1 813230 sc-eQTL 9.44e-01 0.00864 0.122 0.861 B_Intermediate L2
ENSG00000028839 TBPL1 -325601 sc-eQTL 8.93e-01 -0.0164 0.122 0.86 B_Memory L2
ENSG00000112303 VNN2 863110 sc-eQTL 4.17e-02 -0.235 0.115 0.86 B_Memory L2
ENSG00000112306 RPS12 812000 sc-eQTL 2.86e-01 -0.0595 0.0556 0.86 B_Memory L2
ENSG00000118515 SGK1 -691543 sc-eQTL 3.24e-01 -0.101 0.102 0.86 B_Memory L2
ENSG00000146409 SLC18B1 813230 sc-eQTL 4.86e-01 -0.0811 0.116 0.86 B_Memory L2
ENSG00000028839 TBPL1 -325601 sc-eQTL 5.89e-01 0.0631 0.116 0.859 B_Naive1 L2
ENSG00000112303 VNN2 863110 sc-eQTL 2.21e-01 0.133 0.108 0.859 B_Naive1 L2
ENSG00000112306 RPS12 812000 sc-eQTL 6.71e-01 -0.0264 0.0619 0.859 B_Naive1 L2
ENSG00000118515 SGK1 -691543 sc-eQTL 3.09e-01 -0.0986 0.0966 0.859 B_Naive1 L2
ENSG00000146409 SLC18B1 813230 sc-eQTL 7.23e-01 -0.0423 0.119 0.859 B_Naive1 L2
ENSG00000028839 TBPL1 -325601 sc-eQTL 8.15e-01 0.0288 0.123 0.858 B_Naive2 L2
ENSG00000112303 VNN2 863110 sc-eQTL 3.58e-01 0.111 0.12 0.858 B_Naive2 L2
ENSG00000112306 RPS12 812000 sc-eQTL 6.86e-01 -0.0257 0.0636 0.858 B_Naive2 L2
ENSG00000118515 SGK1 -691543 sc-eQTL 5.79e-01 0.0625 0.112 0.858 B_Naive2 L2
ENSG00000146409 SLC18B1 813230 sc-eQTL 1.66e-01 -0.168 0.121 0.858 B_Naive2 L2
ENSG00000028839 TBPL1 -325601 sc-eQTL 2.86e-01 -0.128 0.12 0.852 CD4_CTL L2
ENSG00000112303 VNN2 863110 sc-eQTL 4.14e-01 0.0983 0.12 0.852 CD4_CTL L2
ENSG00000112306 RPS12 812000 sc-eQTL 4.29e-01 -0.044 0.0554 0.852 CD4_CTL L2
ENSG00000118515 SGK1 -691543 sc-eQTL 6.04e-01 0.05 0.0962 0.852 CD4_CTL L2
ENSG00000146409 SLC18B1 813230 sc-eQTL 3.87e-01 -0.0969 0.112 0.852 CD4_CTL L2
ENSG00000028839 TBPL1 -325601 sc-eQTL 9.19e-01 0.00993 0.0979 0.859 CD4_Naive L2
ENSG00000112303 VNN2 863110 sc-eQTL 1.24e-01 0.137 0.0884 0.859 CD4_Naive L2
ENSG00000112306 RPS12 812000 sc-eQTL 3.16e-02 -0.124 0.0571 0.859 CD4_Naive L2
ENSG00000118515 SGK1 -691543 sc-eQTL 7.54e-02 -0.125 0.0701 0.859 CD4_Naive L2
ENSG00000146409 SLC18B1 813230 sc-eQTL 8.61e-01 -0.0194 0.111 0.859 CD4_Naive L2
ENSG00000028839 TBPL1 -325601 sc-eQTL 4.10e-01 -0.0865 0.105 0.859 CD4_TCM L2
ENSG00000112303 VNN2 863110 sc-eQTL 6.16e-01 -0.0522 0.104 0.859 CD4_TCM L2
ENSG00000112306 RPS12 812000 sc-eQTL 8.82e-03 -0.14 0.0531 0.859 CD4_TCM L2
ENSG00000118515 SGK1 -691543 sc-eQTL 1.30e-01 -0.114 0.0751 0.859 CD4_TCM L2
ENSG00000146409 SLC18B1 813230 sc-eQTL 4.47e-01 -0.0951 0.125 0.859 CD4_TCM L2
ENSG00000028839 TBPL1 -325601 sc-eQTL 6.02e-01 0.0628 0.12 0.859 CD4_TEM L2
ENSG00000112303 VNN2 863110 sc-eQTL 4.68e-03 -0.324 0.113 0.859 CD4_TEM L2
ENSG00000112306 RPS12 812000 sc-eQTL 3.54e-01 -0.0439 0.0472 0.859 CD4_TEM L2
ENSG00000118515 SGK1 -691543 sc-eQTL 3.18e-01 -0.0812 0.0812 0.859 CD4_TEM L2
ENSG00000146409 SLC18B1 813230 sc-eQTL 9.34e-01 0.00975 0.118 0.859 CD4_TEM L2
ENSG00000028839 TBPL1 -325601 sc-eQTL 9.36e-01 0.00887 0.111 0.859 CD8_CTL L2
ENSG00000112303 VNN2 863110 sc-eQTL 9.81e-01 -0.00283 0.118 0.859 CD8_CTL L2
ENSG00000112306 RPS12 812000 sc-eQTL 7.83e-01 0.0174 0.0632 0.859 CD8_CTL L2
ENSG00000118515 SGK1 -691543 sc-eQTL 9.75e-05 0.409 0.103 0.859 CD8_CTL L2
ENSG00000146409 SLC18B1 813230 sc-eQTL 4.10e-01 0.101 0.122 0.859 CD8_CTL L2
ENSG00000028839 TBPL1 -325601 sc-eQTL 1.47e-01 0.164 0.113 0.859 CD8_Naive L2
ENSG00000112303 VNN2 863110 sc-eQTL 8.60e-01 -0.0185 0.104 0.859 CD8_Naive L2
ENSG00000112306 RPS12 812000 sc-eQTL 5.73e-02 -0.113 0.0592 0.859 CD8_Naive L2
ENSG00000118515 SGK1 -691543 sc-eQTL 3.14e-01 -0.0754 0.0748 0.859 CD8_Naive L2
ENSG00000146409 SLC18B1 813230 sc-eQTL 6.48e-01 0.0548 0.12 0.859 CD8_Naive L2
ENSG00000028839 TBPL1 -325601 sc-eQTL 2.94e-01 -0.134 0.127 0.852 CD8_TCM L2
ENSG00000112303 VNN2 863110 sc-eQTL 4.96e-01 -0.0795 0.117 0.852 CD8_TCM L2
ENSG00000112306 RPS12 812000 sc-eQTL 4.68e-01 -0.0414 0.0569 0.852 CD8_TCM L2
ENSG00000118515 SGK1 -691543 sc-eQTL 3.34e-01 0.0912 0.0941 0.852 CD8_TCM L2
ENSG00000146409 SLC18B1 813230 sc-eQTL 8.28e-01 0.0272 0.125 0.852 CD8_TCM L2
ENSG00000028839 TBPL1 -325601 sc-eQTL 4.06e-01 0.101 0.122 0.863 CD8_TEM L2
ENSG00000112303 VNN2 863110 sc-eQTL 1.97e-02 0.306 0.13 0.863 CD8_TEM L2
ENSG00000112306 RPS12 812000 sc-eQTL 7.12e-01 -0.0262 0.071 0.863 CD8_TEM L2
ENSG00000118515 SGK1 -691543 sc-eQTL 4.28e-01 0.0924 0.116 0.863 CD8_TEM L2
ENSG00000146409 SLC18B1 813230 sc-eQTL 5.58e-01 -0.0789 0.134 0.863 CD8_TEM L2
ENSG00000028839 TBPL1 -325601 sc-eQTL 4.45e-01 0.0932 0.122 0.857 MAIT L2
ENSG00000112303 VNN2 863110 sc-eQTL 4.11e-01 0.0968 0.118 0.857 MAIT L2
ENSG00000112306 RPS12 812000 sc-eQTL 6.57e-01 -0.0258 0.0579 0.857 MAIT L2
ENSG00000118515 SGK1 -691543 sc-eQTL 7.06e-01 0.0308 0.0815 0.857 MAIT L2
ENSG00000146409 SLC18B1 813230 sc-eQTL 1.17e-02 -0.304 0.12 0.857 MAIT L2
ENSG00000028839 TBPL1 -325601 sc-eQTL 3.82e-01 0.114 0.13 0.862 NK_CD56bright L2
ENSG00000112303 VNN2 863110 sc-eQTL 1.12e-01 0.194 0.122 0.862 NK_CD56bright L2
ENSG00000112306 RPS12 812000 sc-eQTL 7.43e-02 -0.121 0.0676 0.862 NK_CD56bright L2
ENSG00000118515 SGK1 -691543 sc-eQTL 9.13e-01 -0.0111 0.102 0.862 NK_CD56bright L2
ENSG00000028839 TBPL1 -325601 sc-eQTL 3.78e-01 -0.0941 0.107 0.862 NK_CD56dim L2
ENSG00000112303 VNN2 863110 sc-eQTL 1.77e-01 0.165 0.122 0.862 NK_CD56dim L2
ENSG00000112306 RPS12 812000 sc-eQTL 9.27e-01 -0.00443 0.0485 0.862 NK_CD56dim L2
ENSG00000118515 SGK1 -691543 sc-eQTL 3.97e-02 0.22 0.106 0.862 NK_CD56dim L2
ENSG00000028839 TBPL1 -325601 sc-eQTL 3.64e-01 -0.125 0.137 0.868 NK_HLA L2
ENSG00000112303 VNN2 863110 sc-eQTL 5.29e-01 -0.0797 0.127 0.868 NK_HLA L2
ENSG00000112306 RPS12 812000 sc-eQTL 8.90e-01 -0.00815 0.059 0.868 NK_HLA L2
ENSG00000118515 SGK1 -691543 sc-eQTL 7.56e-01 -0.0362 0.117 0.868 NK_HLA L2
ENSG00000028839 TBPL1 -325601 sc-eQTL 6.85e-01 -0.0446 0.11 0.862 NK_cytokine L2
ENSG00000112303 VNN2 863110 sc-eQTL 7.79e-01 0.0337 0.12 0.862 NK_cytokine L2
ENSG00000112306 RPS12 812000 sc-eQTL 5.31e-01 0.0408 0.065 0.862 NK_cytokine L2
ENSG00000118515 SGK1 -691543 sc-eQTL 1.19e-03 0.347 0.106 0.862 NK_cytokine L2
ENSG00000028839 TBPL1 -325601 sc-eQTL 2.47e-01 0.18 0.154 0.878 PB L2
ENSG00000112303 VNN2 863110 sc-eQTL 3.83e-01 0.118 0.135 0.878 PB L2
ENSG00000112306 RPS12 812000 sc-eQTL 6.83e-01 0.0314 0.0767 0.878 PB L2
ENSG00000118515 SGK1 -691543 sc-eQTL 2.25e-01 -0.15 0.123 0.878 PB L2
ENSG00000146409 SLC18B1 813230 sc-eQTL 6.47e-02 -0.264 0.142 0.878 PB L2
ENSG00000028839 TBPL1 -325601 sc-eQTL 1.37e-01 -0.189 0.127 0.857 Pro_T L2
ENSG00000112303 VNN2 863110 sc-eQTL 1.37e-02 -0.299 0.12 0.857 Pro_T L2
ENSG00000112306 RPS12 812000 sc-eQTL 6.82e-01 -0.0189 0.0461 0.857 Pro_T L2
ENSG00000118515 SGK1 -691543 sc-eQTL 2.14e-01 -0.115 0.0922 0.857 Pro_T L2
ENSG00000146409 SLC18B1 813230 sc-eQTL 9.62e-02 -0.198 0.119 0.857 Pro_T L2
ENSG00000028839 TBPL1 -325601 sc-eQTL 2.84e-01 0.134 0.125 0.859 Treg L2
ENSG00000112303 VNN2 863110 sc-eQTL 9.99e-01 0.000124 0.0995 0.859 Treg L2
ENSG00000112306 RPS12 812000 sc-eQTL 3.35e-02 -0.0931 0.0435 0.859 Treg L2
ENSG00000118515 SGK1 -691543 sc-eQTL 6.71e-01 0.0394 0.0927 0.859 Treg L2
ENSG00000146409 SLC18B1 813230 sc-eQTL 7.84e-03 -0.328 0.122 0.859 Treg L2
ENSG00000028839 TBPL1 -325601 sc-eQTL 9.14e-01 -0.0141 0.131 0.866 cDC L2
ENSG00000093134 VNN3 891804 sc-eQTL 8.45e-01 -0.02 0.102 0.866 cDC L2
ENSG00000112299 VNN1 912514 sc-eQTL 1.03e-01 -0.195 0.119 0.866 cDC L2
ENSG00000112303 VNN2 863110 sc-eQTL 2.39e-02 0.262 0.115 0.866 cDC L2
ENSG00000112306 RPS12 812000 sc-eQTL 8.62e-02 -0.0986 0.0572 0.866 cDC L2
ENSG00000118515 SGK1 -691543 sc-eQTL 1.96e-01 0.125 0.0966 0.866 cDC L2
ENSG00000146409 SLC18B1 813230 sc-eQTL 6.01e-01 0.0598 0.114 0.866 cDC L2
ENSG00000286438 AL591115.1 523441 sc-eQTL 7.88e-01 0.0245 0.0912 0.866 cDC L2
ENSG00000286887 AL355881.1 -669732 sc-eQTL 1.78e-02 0.264 0.111 0.866 cDC L2
ENSG00000028839 TBPL1 -325601 sc-eQTL 8.31e-01 -0.022 0.103 0.859 cMono_IL1B L2
ENSG00000093134 VNN3 891804 sc-eQTL 2.86e-01 -0.118 0.11 0.859 cMono_IL1B L2
ENSG00000112299 VNN1 912514 sc-eQTL 2.68e-01 -0.123 0.111 0.859 cMono_IL1B L2
ENSG00000112303 VNN2 863110 sc-eQTL 8.03e-01 -0.0223 0.0891 0.859 cMono_IL1B L2
ENSG00000112306 RPS12 812000 sc-eQTL 2.66e-03 -0.147 0.0484 0.859 cMono_IL1B L2
ENSG00000118515 SGK1 -691543 sc-eQTL 1.70e-01 0.101 0.0734 0.859 cMono_IL1B L2
ENSG00000146409 SLC18B1 813230 sc-eQTL 6.55e-01 0.0426 0.0954 0.859 cMono_IL1B L2
ENSG00000286887 AL355881.1 -669732 sc-eQTL 3.30e-01 0.0968 0.0991 0.859 cMono_IL1B L2
ENSG00000028839 TBPL1 -325601 sc-eQTL 5.19e-01 -0.0763 0.118 0.859 cMono_S100A L2
ENSG00000093134 VNN3 891804 sc-eQTL 4.20e-01 -0.086 0.107 0.859 cMono_S100A L2
ENSG00000112299 VNN1 912514 sc-eQTL 1.15e-01 -0.182 0.115 0.859 cMono_S100A L2
ENSG00000112303 VNN2 863110 sc-eQTL 7.49e-01 0.0243 0.0759 0.859 cMono_S100A L2
ENSG00000112306 RPS12 812000 sc-eQTL 4.79e-02 -0.108 0.0541 0.859 cMono_S100A L2
ENSG00000118515 SGK1 -691543 sc-eQTL 5.50e-02 0.12 0.0619 0.859 cMono_S100A L2
ENSG00000146409 SLC18B1 813230 sc-eQTL 6.50e-01 -0.0459 0.101 0.859 cMono_S100A L2
ENSG00000286887 AL355881.1 -669732 sc-eQTL 2.36e-01 0.117 0.0986 0.859 cMono_S100A L2
ENSG00000028839 TBPL1 -325601 sc-eQTL 6.37e-01 0.0736 0.156 0.855 gdT L2
ENSG00000112303 VNN2 863110 sc-eQTL 4.77e-01 0.106 0.148 0.855 gdT L2
ENSG00000112306 RPS12 812000 sc-eQTL 1.68e-01 -0.0777 0.0561 0.855 gdT L2
ENSG00000118515 SGK1 -691543 sc-eQTL 1.09e-01 0.17 0.106 0.855 gdT L2
ENSG00000146409 SLC18B1 813230 sc-eQTL 4.87e-01 -0.101 0.146 0.855 gdT L2
ENSG00000028839 TBPL1 -325601 sc-eQTL 3.65e-01 0.109 0.12 0.858 intMono L2
ENSG00000093134 VNN3 891804 sc-eQTL 2.92e-01 -0.122 0.115 0.858 intMono L2
ENSG00000112299 VNN1 912514 sc-eQTL 4.80e-02 -0.225 0.113 0.858 intMono L2
ENSG00000112303 VNN2 863110 sc-eQTL 9.73e-01 0.00397 0.116 0.858 intMono L2
ENSG00000112306 RPS12 812000 sc-eQTL 2.26e-01 -0.0612 0.0504 0.858 intMono L2
ENSG00000118515 SGK1 -691543 sc-eQTL 2.50e-02 0.189 0.0839 0.858 intMono L2
ENSG00000146409 SLC18B1 813230 sc-eQTL 1.72e-01 0.168 0.123 0.858 intMono L2
ENSG00000286887 AL355881.1 -669732 sc-eQTL 6.80e-02 0.214 0.117 0.858 intMono L2
ENSG00000028839 TBPL1 -325601 sc-eQTL 7.23e-01 0.0455 0.128 0.869 ncMono L2
ENSG00000093134 VNN3 891804 sc-eQTL 8.30e-02 0.212 0.122 0.869 ncMono L2
ENSG00000112299 VNN1 912514 sc-eQTL 5.63e-01 -0.0704 0.122 0.869 ncMono L2
ENSG00000112303 VNN2 863110 sc-eQTL 5.56e-01 0.0689 0.117 0.869 ncMono L2
ENSG00000112306 RPS12 812000 sc-eQTL 1.57e-01 0.0828 0.0584 0.869 ncMono L2
ENSG00000118515 SGK1 -691543 sc-eQTL 5.12e-01 0.0545 0.0829 0.869 ncMono L2
ENSG00000146409 SLC18B1 813230 sc-eQTL 5.15e-01 0.0676 0.104 0.869 ncMono L2
ENSG00000286887 AL355881.1 -669732 sc-eQTL 2.67e-02 0.242 0.108 0.869 ncMono L2
ENSG00000028839 TBPL1 -325601 sc-eQTL 2.58e-01 0.171 0.151 0.873 pDC L2
ENSG00000093134 VNN3 891804 sc-eQTL 9.54e-01 -0.00581 0.101 0.873 pDC L2
ENSG00000112299 VNN1 912514 sc-eQTL 7.67e-01 0.0306 0.103 0.873 pDC L2
ENSG00000112303 VNN2 863110 sc-eQTL 1.51e-01 -0.176 0.122 0.873 pDC L2
ENSG00000112306 RPS12 812000 sc-eQTL 1.64e-01 -0.118 0.0841 0.873 pDC L2
ENSG00000118515 SGK1 -691543 sc-eQTL 5.76e-01 0.0482 0.0859 0.873 pDC L2
ENSG00000146409 SLC18B1 813230 sc-eQTL 4.66e-01 -0.0914 0.125 0.873 pDC L2
ENSG00000286438 AL591115.1 523441 sc-eQTL 3.83e-01 -0.105 0.12 0.873 pDC L2
ENSG00000286887 AL355881.1 -669732 sc-eQTL 9.67e-01 -0.00441 0.106 0.873 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -325601 sc-eQTL 7.91e-01 0.0325 0.122 0.859 B_Memory LOneK1K
ENSG00000112303 VNN2 863110 sc-eQTL 6.66e-01 -0.046 0.106 0.859 B_Memory LOneK1K
ENSG00000112306 RPS12 812000 sc-eQTL 4.13e-01 -0.0496 0.0606 0.859 B_Memory LOneK1K
ENSG00000118515 SGK1 -691543 sc-eQTL 3.50e-01 0.0887 0.0946 0.859 B_Memory LOneK1K
ENSG00000146409 SLC18B1 813230 sc-eQTL 9.24e-01 0.0106 0.111 0.859 B_Memory LOneK1K
ENSG00000028839 TBPL1 -325601 sc-eQTL 9.05e-01 0.0139 0.116 0.859 B_Naive LOneK1K
ENSG00000112303 VNN2 863110 sc-eQTL 1.18e-01 0.159 0.101 0.859 B_Naive LOneK1K
ENSG00000112306 RPS12 812000 sc-eQTL 8.45e-01 -0.0121 0.0616 0.859 B_Naive LOneK1K
ENSG00000118515 SGK1 -691543 sc-eQTL 2.42e-01 -0.112 0.0951 0.859 B_Naive LOneK1K
ENSG00000146409 SLC18B1 813230 sc-eQTL 4.55e-01 -0.087 0.116 0.859 B_Naive LOneK1K
ENSG00000028839 TBPL1 -325601 sc-eQTL 9.57e-01 -0.00506 0.0942 0.859 CD14_Mono LOneK1K
ENSG00000093134 VNN3 891804 sc-eQTL 2.38e-01 -0.126 0.106 0.859 CD14_Mono LOneK1K
ENSG00000112299 VNN1 912514 sc-eQTL 8.18e-02 -0.193 0.111 0.859 CD14_Mono LOneK1K
ENSG00000112303 VNN2 863110 sc-eQTL 9.26e-01 -0.00687 0.0736 0.859 CD14_Mono LOneK1K
ENSG00000112306 RPS12 812000 sc-eQTL 4.37e-03 -0.143 0.0495 0.859 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -691543 sc-eQTL 7.23e-02 0.123 0.0683 0.859 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 813230 sc-eQTL 7.80e-01 0.0251 0.0898 0.859 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -669732 sc-eQTL 1.69e-01 0.129 0.0938 0.859 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -325601 sc-eQTL 3.82e-01 0.107 0.122 0.86 CD16_Mono LOneK1K
ENSG00000093134 VNN3 891804 sc-eQTL 7.50e-01 0.0377 0.119 0.86 CD16_Mono LOneK1K
ENSG00000112299 VNN1 912514 sc-eQTL 6.00e-01 -0.0616 0.117 0.86 CD16_Mono LOneK1K
ENSG00000112303 VNN2 863110 sc-eQTL 5.44e-01 0.0673 0.111 0.86 CD16_Mono LOneK1K
ENSG00000112306 RPS12 812000 sc-eQTL 8.42e-01 0.00937 0.047 0.86 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -691543 sc-eQTL 3.95e-02 0.146 0.0704 0.86 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 813230 sc-eQTL 1.87e-01 0.15 0.114 0.86 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -669732 sc-eQTL 1.56e-02 0.248 0.102 0.86 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -325601 sc-eQTL 5.70e-01 -0.0558 0.0981 0.862 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 863110 sc-eQTL 6.04e-01 0.0606 0.117 0.862 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 812000 sc-eQTL 9.37e-01 -0.00377 0.0476 0.862 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -691543 sc-eQTL 2.30e-04 0.357 0.0953 0.862 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000093134 VNN3 891804 eQTL 0.0483 -0.0405 0.0205 0.0 0.0 0.148
ENSG00000112299 VNN1 912514 eQTL 0.00321 -0.0898 0.0304 0.0305 0.0 0.148

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina