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Genes within 1Mb (chr6:133617862:C:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -334308 sc-eQTL 7.61e-01 0.0356 0.117 0.859 B L1
ENSG00000112303 VNN2 854403 sc-eQTL 2.35e-01 0.104 0.087 0.859 B L1
ENSG00000112306 RPS12 803293 sc-eQTL 6.75e-01 -0.0222 0.0528 0.859 B L1
ENSG00000118515 SGK1 -700250 sc-eQTL 5.52e-01 -0.0485 0.0813 0.859 B L1
ENSG00000146409 SLC18B1 804523 sc-eQTL 5.49e-01 -0.0666 0.111 0.859 B L1
ENSG00000028839 TBPL1 -334308 sc-eQTL 9.43e-01 0.00616 0.0857 0.859 CD4T L1
ENSG00000112303 VNN2 854403 sc-eQTL 1.82e-01 0.103 0.0769 0.859 CD4T L1
ENSG00000112306 RPS12 803293 sc-eQTL 1.17e-02 -0.132 0.0517 0.859 CD4T L1
ENSG00000118515 SGK1 -700250 sc-eQTL 2.00e-02 -0.163 0.0697 0.859 CD4T L1
ENSG00000146409 SLC18B1 804523 sc-eQTL 2.56e-01 -0.12 0.106 0.859 CD4T L1
ENSG00000028839 TBPL1 -334308 sc-eQTL 2.24e-01 0.103 0.0845 0.859 CD8T L1
ENSG00000112303 VNN2 854403 sc-eQTL 7.97e-01 0.0267 0.103 0.859 CD8T L1
ENSG00000112306 RPS12 803293 sc-eQTL 2.89e-01 -0.0374 0.0352 0.859 CD8T L1
ENSG00000118515 SGK1 -700250 sc-eQTL 4.24e-01 -0.0435 0.0544 0.859 CD8T L1
ENSG00000146409 SLC18B1 804523 sc-eQTL 1.44e-01 0.156 0.106 0.859 CD8T L1
ENSG00000028839 TBPL1 -334308 sc-eQTL 7.41e-01 0.0429 0.13 0.856 DC L1
ENSG00000093134 VNN3 883097 sc-eQTL 8.03e-01 -0.025 0.1 0.856 DC L1
ENSG00000112299 VNN1 903807 sc-eQTL 4.86e-01 -0.0753 0.108 0.856 DC L1
ENSG00000112303 VNN2 854403 sc-eQTL 3.24e-01 0.114 0.115 0.856 DC L1
ENSG00000112306 RPS12 803293 sc-eQTL 1.55e-01 -0.092 0.0645 0.856 DC L1
ENSG00000118515 SGK1 -700250 sc-eQTL 2.32e-01 0.0899 0.075 0.856 DC L1
ENSG00000146409 SLC18B1 804523 sc-eQTL 7.73e-01 -0.0297 0.103 0.856 DC L1
ENSG00000286438 AL591115.1 514734 sc-eQTL 3.12e-01 -0.0944 0.0931 0.856 DC L1
ENSG00000286887 AL355881.1 -678439 sc-eQTL 6.91e-02 0.211 0.115 0.856 DC L1
ENSG00000028839 TBPL1 -334308 sc-eQTL 6.22e-01 0.0447 0.0906 0.859 Mono L1
ENSG00000093134 VNN3 883097 sc-eQTL 1.88e-01 -0.137 0.104 0.859 Mono L1
ENSG00000112299 VNN1 903807 sc-eQTL 1.10e-01 -0.179 0.111 0.859 Mono L1
ENSG00000112303 VNN2 854403 sc-eQTL 8.50e-01 -0.015 0.079 0.859 Mono L1
ENSG00000112306 RPS12 803293 sc-eQTL 1.21e-02 -0.118 0.0467 0.859 Mono L1
ENSG00000118515 SGK1 -700250 sc-eQTL 7.22e-02 0.12 0.0664 0.859 Mono L1
ENSG00000146409 SLC18B1 804523 sc-eQTL 8.66e-01 0.0158 0.0937 0.859 Mono L1
ENSG00000286887 AL355881.1 -678439 sc-eQTL 4.71e-02 0.182 0.0912 0.859 Mono L1
ENSG00000028839 TBPL1 -334308 sc-eQTL 7.54e-01 -0.0312 0.0994 0.861 NK L1
ENSG00000112303 VNN2 854403 sc-eQTL 4.19e-01 0.0926 0.114 0.861 NK L1
ENSG00000112306 RPS12 803293 sc-eQTL 7.97e-01 -0.0122 0.0473 0.861 NK L1
ENSG00000118515 SGK1 -700250 sc-eQTL 8.62e-03 0.228 0.0861 0.861 NK L1
ENSG00000028839 TBPL1 -334308 sc-eQTL 1.17e-01 0.188 0.12 0.859 Other_T L1
ENSG00000112303 VNN2 854403 sc-eQTL 2.25e-01 0.139 0.114 0.859 Other_T L1
ENSG00000112306 RPS12 803293 sc-eQTL 6.48e-01 0.0208 0.0454 0.859 Other_T L1
ENSG00000118515 SGK1 -700250 sc-eQTL 4.04e-01 -0.0698 0.0834 0.859 Other_T L1
ENSG00000146409 SLC18B1 804523 sc-eQTL 7.42e-03 -0.33 0.122 0.859 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -334308 sc-eQTL 8.82e-01 0.02 0.134 0.862 B_Activated L2
ENSG00000112303 VNN2 854403 sc-eQTL 7.02e-01 0.0468 0.122 0.862 B_Activated L2
ENSG00000112306 RPS12 803293 sc-eQTL 9.59e-02 -0.109 0.065 0.862 B_Activated L2
ENSG00000118515 SGK1 -700250 sc-eQTL 9.42e-01 0.00858 0.117 0.862 B_Activated L2
ENSG00000146409 SLC18B1 804523 sc-eQTL 5.58e-01 0.0673 0.115 0.862 B_Activated L2
ENSG00000028839 TBPL1 -334308 sc-eQTL 8.66e-01 0.0216 0.128 0.861 B_Intermediate L2
ENSG00000112303 VNN2 854403 sc-eQTL 6.16e-01 -0.0555 0.111 0.861 B_Intermediate L2
ENSG00000112306 RPS12 803293 sc-eQTL 2.72e-01 -0.0745 0.0676 0.861 B_Intermediate L2
ENSG00000118515 SGK1 -700250 sc-eQTL 7.07e-02 0.211 0.116 0.861 B_Intermediate L2
ENSG00000146409 SLC18B1 804523 sc-eQTL 9.44e-01 0.00864 0.122 0.861 B_Intermediate L2
ENSG00000028839 TBPL1 -334308 sc-eQTL 8.93e-01 -0.0164 0.122 0.86 B_Memory L2
ENSG00000112303 VNN2 854403 sc-eQTL 4.17e-02 -0.235 0.115 0.86 B_Memory L2
ENSG00000112306 RPS12 803293 sc-eQTL 2.86e-01 -0.0595 0.0556 0.86 B_Memory L2
ENSG00000118515 SGK1 -700250 sc-eQTL 3.24e-01 -0.101 0.102 0.86 B_Memory L2
ENSG00000146409 SLC18B1 804523 sc-eQTL 4.86e-01 -0.0811 0.116 0.86 B_Memory L2
ENSG00000028839 TBPL1 -334308 sc-eQTL 5.89e-01 0.0631 0.116 0.859 B_Naive1 L2
ENSG00000112303 VNN2 854403 sc-eQTL 2.21e-01 0.133 0.108 0.859 B_Naive1 L2
ENSG00000112306 RPS12 803293 sc-eQTL 6.71e-01 -0.0264 0.0619 0.859 B_Naive1 L2
ENSG00000118515 SGK1 -700250 sc-eQTL 3.09e-01 -0.0986 0.0966 0.859 B_Naive1 L2
ENSG00000146409 SLC18B1 804523 sc-eQTL 7.23e-01 -0.0423 0.119 0.859 B_Naive1 L2
ENSG00000028839 TBPL1 -334308 sc-eQTL 8.15e-01 0.0288 0.123 0.858 B_Naive2 L2
ENSG00000112303 VNN2 854403 sc-eQTL 3.58e-01 0.111 0.12 0.858 B_Naive2 L2
ENSG00000112306 RPS12 803293 sc-eQTL 6.86e-01 -0.0257 0.0636 0.858 B_Naive2 L2
ENSG00000118515 SGK1 -700250 sc-eQTL 5.79e-01 0.0625 0.112 0.858 B_Naive2 L2
ENSG00000146409 SLC18B1 804523 sc-eQTL 1.66e-01 -0.168 0.121 0.858 B_Naive2 L2
ENSG00000028839 TBPL1 -334308 sc-eQTL 2.86e-01 -0.128 0.12 0.852 CD4_CTL L2
ENSG00000112303 VNN2 854403 sc-eQTL 4.14e-01 0.0983 0.12 0.852 CD4_CTL L2
ENSG00000112306 RPS12 803293 sc-eQTL 4.29e-01 -0.044 0.0554 0.852 CD4_CTL L2
ENSG00000118515 SGK1 -700250 sc-eQTL 6.04e-01 0.05 0.0962 0.852 CD4_CTL L2
ENSG00000146409 SLC18B1 804523 sc-eQTL 3.87e-01 -0.0969 0.112 0.852 CD4_CTL L2
ENSG00000028839 TBPL1 -334308 sc-eQTL 9.19e-01 0.00993 0.0979 0.859 CD4_Naive L2
ENSG00000112303 VNN2 854403 sc-eQTL 1.24e-01 0.137 0.0884 0.859 CD4_Naive L2
ENSG00000112306 RPS12 803293 sc-eQTL 3.16e-02 -0.124 0.0571 0.859 CD4_Naive L2
ENSG00000118515 SGK1 -700250 sc-eQTL 7.54e-02 -0.125 0.0701 0.859 CD4_Naive L2
ENSG00000146409 SLC18B1 804523 sc-eQTL 8.61e-01 -0.0194 0.111 0.859 CD4_Naive L2
ENSG00000028839 TBPL1 -334308 sc-eQTL 4.10e-01 -0.0865 0.105 0.859 CD4_TCM L2
ENSG00000112303 VNN2 854403 sc-eQTL 6.16e-01 -0.0522 0.104 0.859 CD4_TCM L2
ENSG00000112306 RPS12 803293 sc-eQTL 8.82e-03 -0.14 0.0531 0.859 CD4_TCM L2
ENSG00000118515 SGK1 -700250 sc-eQTL 1.30e-01 -0.114 0.0751 0.859 CD4_TCM L2
ENSG00000146409 SLC18B1 804523 sc-eQTL 4.47e-01 -0.0951 0.125 0.859 CD4_TCM L2
ENSG00000028839 TBPL1 -334308 sc-eQTL 6.02e-01 0.0628 0.12 0.859 CD4_TEM L2
ENSG00000112303 VNN2 854403 sc-eQTL 4.68e-03 -0.324 0.113 0.859 CD4_TEM L2
ENSG00000112306 RPS12 803293 sc-eQTL 3.54e-01 -0.0439 0.0472 0.859 CD4_TEM L2
ENSG00000118515 SGK1 -700250 sc-eQTL 3.18e-01 -0.0812 0.0812 0.859 CD4_TEM L2
ENSG00000146409 SLC18B1 804523 sc-eQTL 9.34e-01 0.00975 0.118 0.859 CD4_TEM L2
ENSG00000028839 TBPL1 -334308 sc-eQTL 9.36e-01 0.00887 0.111 0.859 CD8_CTL L2
ENSG00000112303 VNN2 854403 sc-eQTL 9.81e-01 -0.00283 0.118 0.859 CD8_CTL L2
ENSG00000112306 RPS12 803293 sc-eQTL 7.83e-01 0.0174 0.0632 0.859 CD8_CTL L2
ENSG00000118515 SGK1 -700250 sc-eQTL 9.75e-05 0.409 0.103 0.859 CD8_CTL L2
ENSG00000146409 SLC18B1 804523 sc-eQTL 4.10e-01 0.101 0.122 0.859 CD8_CTL L2
ENSG00000028839 TBPL1 -334308 sc-eQTL 1.47e-01 0.164 0.113 0.859 CD8_Naive L2
ENSG00000112303 VNN2 854403 sc-eQTL 8.60e-01 -0.0185 0.104 0.859 CD8_Naive L2
ENSG00000112306 RPS12 803293 sc-eQTL 5.73e-02 -0.113 0.0592 0.859 CD8_Naive L2
ENSG00000118515 SGK1 -700250 sc-eQTL 3.14e-01 -0.0754 0.0748 0.859 CD8_Naive L2
ENSG00000146409 SLC18B1 804523 sc-eQTL 6.48e-01 0.0548 0.12 0.859 CD8_Naive L2
ENSG00000028839 TBPL1 -334308 sc-eQTL 2.94e-01 -0.134 0.127 0.852 CD8_TCM L2
ENSG00000112303 VNN2 854403 sc-eQTL 4.96e-01 -0.0795 0.117 0.852 CD8_TCM L2
ENSG00000112306 RPS12 803293 sc-eQTL 4.68e-01 -0.0414 0.0569 0.852 CD8_TCM L2
ENSG00000118515 SGK1 -700250 sc-eQTL 3.34e-01 0.0912 0.0941 0.852 CD8_TCM L2
ENSG00000146409 SLC18B1 804523 sc-eQTL 8.28e-01 0.0272 0.125 0.852 CD8_TCM L2
ENSG00000028839 TBPL1 -334308 sc-eQTL 4.06e-01 0.101 0.122 0.863 CD8_TEM L2
ENSG00000112303 VNN2 854403 sc-eQTL 1.97e-02 0.306 0.13 0.863 CD8_TEM L2
ENSG00000112306 RPS12 803293 sc-eQTL 7.12e-01 -0.0262 0.071 0.863 CD8_TEM L2
ENSG00000118515 SGK1 -700250 sc-eQTL 4.28e-01 0.0924 0.116 0.863 CD8_TEM L2
ENSG00000146409 SLC18B1 804523 sc-eQTL 5.58e-01 -0.0789 0.134 0.863 CD8_TEM L2
ENSG00000028839 TBPL1 -334308 sc-eQTL 4.45e-01 0.0932 0.122 0.857 MAIT L2
ENSG00000112303 VNN2 854403 sc-eQTL 4.11e-01 0.0968 0.118 0.857 MAIT L2
ENSG00000112306 RPS12 803293 sc-eQTL 6.57e-01 -0.0258 0.0579 0.857 MAIT L2
ENSG00000118515 SGK1 -700250 sc-eQTL 7.06e-01 0.0308 0.0815 0.857 MAIT L2
ENSG00000146409 SLC18B1 804523 sc-eQTL 1.17e-02 -0.304 0.12 0.857 MAIT L2
ENSG00000028839 TBPL1 -334308 sc-eQTL 3.82e-01 0.114 0.13 0.862 NK_CD56bright L2
ENSG00000112303 VNN2 854403 sc-eQTL 1.12e-01 0.194 0.122 0.862 NK_CD56bright L2
ENSG00000112306 RPS12 803293 sc-eQTL 7.43e-02 -0.121 0.0676 0.862 NK_CD56bright L2
ENSG00000118515 SGK1 -700250 sc-eQTL 9.13e-01 -0.0111 0.102 0.862 NK_CD56bright L2
ENSG00000028839 TBPL1 -334308 sc-eQTL 3.78e-01 -0.0941 0.107 0.862 NK_CD56dim L2
ENSG00000112303 VNN2 854403 sc-eQTL 1.77e-01 0.165 0.122 0.862 NK_CD56dim L2
ENSG00000112306 RPS12 803293 sc-eQTL 9.27e-01 -0.00443 0.0485 0.862 NK_CD56dim L2
ENSG00000118515 SGK1 -700250 sc-eQTL 3.97e-02 0.22 0.106 0.862 NK_CD56dim L2
ENSG00000028839 TBPL1 -334308 sc-eQTL 3.64e-01 -0.125 0.137 0.868 NK_HLA L2
ENSG00000112303 VNN2 854403 sc-eQTL 5.29e-01 -0.0797 0.127 0.868 NK_HLA L2
ENSG00000112306 RPS12 803293 sc-eQTL 8.90e-01 -0.00815 0.059 0.868 NK_HLA L2
ENSG00000118515 SGK1 -700250 sc-eQTL 7.56e-01 -0.0362 0.117 0.868 NK_HLA L2
ENSG00000028839 TBPL1 -334308 sc-eQTL 6.85e-01 -0.0446 0.11 0.862 NK_cytokine L2
ENSG00000112303 VNN2 854403 sc-eQTL 7.79e-01 0.0337 0.12 0.862 NK_cytokine L2
ENSG00000112306 RPS12 803293 sc-eQTL 5.31e-01 0.0408 0.065 0.862 NK_cytokine L2
ENSG00000118515 SGK1 -700250 sc-eQTL 1.19e-03 0.347 0.106 0.862 NK_cytokine L2
ENSG00000028839 TBPL1 -334308 sc-eQTL 2.47e-01 0.18 0.154 0.878 PB L2
ENSG00000112303 VNN2 854403 sc-eQTL 3.83e-01 0.118 0.135 0.878 PB L2
ENSG00000112306 RPS12 803293 sc-eQTL 6.83e-01 0.0314 0.0767 0.878 PB L2
ENSG00000118515 SGK1 -700250 sc-eQTL 2.25e-01 -0.15 0.123 0.878 PB L2
ENSG00000146409 SLC18B1 804523 sc-eQTL 6.47e-02 -0.264 0.142 0.878 PB L2
ENSG00000028839 TBPL1 -334308 sc-eQTL 1.37e-01 -0.189 0.127 0.857 Pro_T L2
ENSG00000112303 VNN2 854403 sc-eQTL 1.37e-02 -0.299 0.12 0.857 Pro_T L2
ENSG00000112306 RPS12 803293 sc-eQTL 6.82e-01 -0.0189 0.0461 0.857 Pro_T L2
ENSG00000118515 SGK1 -700250 sc-eQTL 2.14e-01 -0.115 0.0922 0.857 Pro_T L2
ENSG00000146409 SLC18B1 804523 sc-eQTL 9.62e-02 -0.198 0.119 0.857 Pro_T L2
ENSG00000028839 TBPL1 -334308 sc-eQTL 2.84e-01 0.134 0.125 0.859 Treg L2
ENSG00000112303 VNN2 854403 sc-eQTL 9.99e-01 0.000124 0.0995 0.859 Treg L2
ENSG00000112306 RPS12 803293 sc-eQTL 3.35e-02 -0.0931 0.0435 0.859 Treg L2
ENSG00000118515 SGK1 -700250 sc-eQTL 6.71e-01 0.0394 0.0927 0.859 Treg L2
ENSG00000146409 SLC18B1 804523 sc-eQTL 7.84e-03 -0.328 0.122 0.859 Treg L2
ENSG00000028839 TBPL1 -334308 sc-eQTL 9.14e-01 -0.0141 0.131 0.866 cDC L2
ENSG00000093134 VNN3 883097 sc-eQTL 8.45e-01 -0.02 0.102 0.866 cDC L2
ENSG00000112299 VNN1 903807 sc-eQTL 1.03e-01 -0.195 0.119 0.866 cDC L2
ENSG00000112303 VNN2 854403 sc-eQTL 2.39e-02 0.262 0.115 0.866 cDC L2
ENSG00000112306 RPS12 803293 sc-eQTL 8.62e-02 -0.0986 0.0572 0.866 cDC L2
ENSG00000118515 SGK1 -700250 sc-eQTL 1.96e-01 0.125 0.0966 0.866 cDC L2
ENSG00000146409 SLC18B1 804523 sc-eQTL 6.01e-01 0.0598 0.114 0.866 cDC L2
ENSG00000286438 AL591115.1 514734 sc-eQTL 7.88e-01 0.0245 0.0912 0.866 cDC L2
ENSG00000286887 AL355881.1 -678439 sc-eQTL 1.78e-02 0.264 0.111 0.866 cDC L2
ENSG00000028839 TBPL1 -334308 sc-eQTL 8.31e-01 -0.022 0.103 0.859 cMono_IL1B L2
ENSG00000093134 VNN3 883097 sc-eQTL 2.86e-01 -0.118 0.11 0.859 cMono_IL1B L2
ENSG00000112299 VNN1 903807 sc-eQTL 2.68e-01 -0.123 0.111 0.859 cMono_IL1B L2
ENSG00000112303 VNN2 854403 sc-eQTL 8.03e-01 -0.0223 0.0891 0.859 cMono_IL1B L2
ENSG00000112306 RPS12 803293 sc-eQTL 2.66e-03 -0.147 0.0484 0.859 cMono_IL1B L2
ENSG00000118515 SGK1 -700250 sc-eQTL 1.70e-01 0.101 0.0734 0.859 cMono_IL1B L2
ENSG00000146409 SLC18B1 804523 sc-eQTL 6.55e-01 0.0426 0.0954 0.859 cMono_IL1B L2
ENSG00000286887 AL355881.1 -678439 sc-eQTL 3.30e-01 0.0968 0.0991 0.859 cMono_IL1B L2
ENSG00000028839 TBPL1 -334308 sc-eQTL 5.19e-01 -0.0763 0.118 0.859 cMono_S100A L2
ENSG00000093134 VNN3 883097 sc-eQTL 4.20e-01 -0.086 0.107 0.859 cMono_S100A L2
ENSG00000112299 VNN1 903807 sc-eQTL 1.15e-01 -0.182 0.115 0.859 cMono_S100A L2
ENSG00000112303 VNN2 854403 sc-eQTL 7.49e-01 0.0243 0.0759 0.859 cMono_S100A L2
ENSG00000112306 RPS12 803293 sc-eQTL 4.79e-02 -0.108 0.0541 0.859 cMono_S100A L2
ENSG00000118515 SGK1 -700250 sc-eQTL 5.50e-02 0.12 0.0619 0.859 cMono_S100A L2
ENSG00000146409 SLC18B1 804523 sc-eQTL 6.50e-01 -0.0459 0.101 0.859 cMono_S100A L2
ENSG00000286887 AL355881.1 -678439 sc-eQTL 2.36e-01 0.117 0.0986 0.859 cMono_S100A L2
ENSG00000028839 TBPL1 -334308 sc-eQTL 6.37e-01 0.0736 0.156 0.855 gdT L2
ENSG00000112303 VNN2 854403 sc-eQTL 4.77e-01 0.106 0.148 0.855 gdT L2
ENSG00000112306 RPS12 803293 sc-eQTL 1.68e-01 -0.0777 0.0561 0.855 gdT L2
ENSG00000118515 SGK1 -700250 sc-eQTL 1.09e-01 0.17 0.106 0.855 gdT L2
ENSG00000146409 SLC18B1 804523 sc-eQTL 4.87e-01 -0.101 0.146 0.855 gdT L2
ENSG00000028839 TBPL1 -334308 sc-eQTL 3.65e-01 0.109 0.12 0.858 intMono L2
ENSG00000093134 VNN3 883097 sc-eQTL 2.92e-01 -0.122 0.115 0.858 intMono L2
ENSG00000112299 VNN1 903807 sc-eQTL 4.80e-02 -0.225 0.113 0.858 intMono L2
ENSG00000112303 VNN2 854403 sc-eQTL 9.73e-01 0.00397 0.116 0.858 intMono L2
ENSG00000112306 RPS12 803293 sc-eQTL 2.26e-01 -0.0612 0.0504 0.858 intMono L2
ENSG00000118515 SGK1 -700250 sc-eQTL 2.50e-02 0.189 0.0839 0.858 intMono L2
ENSG00000146409 SLC18B1 804523 sc-eQTL 1.72e-01 0.168 0.123 0.858 intMono L2
ENSG00000286887 AL355881.1 -678439 sc-eQTL 6.80e-02 0.214 0.117 0.858 intMono L2
ENSG00000028839 TBPL1 -334308 sc-eQTL 7.23e-01 0.0455 0.128 0.869 ncMono L2
ENSG00000093134 VNN3 883097 sc-eQTL 8.30e-02 0.212 0.122 0.869 ncMono L2
ENSG00000112299 VNN1 903807 sc-eQTL 5.63e-01 -0.0704 0.122 0.869 ncMono L2
ENSG00000112303 VNN2 854403 sc-eQTL 5.56e-01 0.0689 0.117 0.869 ncMono L2
ENSG00000112306 RPS12 803293 sc-eQTL 1.57e-01 0.0828 0.0584 0.869 ncMono L2
ENSG00000118515 SGK1 -700250 sc-eQTL 5.12e-01 0.0545 0.0829 0.869 ncMono L2
ENSG00000146409 SLC18B1 804523 sc-eQTL 5.15e-01 0.0676 0.104 0.869 ncMono L2
ENSG00000286887 AL355881.1 -678439 sc-eQTL 2.67e-02 0.242 0.108 0.869 ncMono L2
ENSG00000028839 TBPL1 -334308 sc-eQTL 2.58e-01 0.171 0.151 0.873 pDC L2
ENSG00000093134 VNN3 883097 sc-eQTL 9.54e-01 -0.00581 0.101 0.873 pDC L2
ENSG00000112299 VNN1 903807 sc-eQTL 7.67e-01 0.0306 0.103 0.873 pDC L2
ENSG00000112303 VNN2 854403 sc-eQTL 1.51e-01 -0.176 0.122 0.873 pDC L2
ENSG00000112306 RPS12 803293 sc-eQTL 1.64e-01 -0.118 0.0841 0.873 pDC L2
ENSG00000118515 SGK1 -700250 sc-eQTL 5.76e-01 0.0482 0.0859 0.873 pDC L2
ENSG00000146409 SLC18B1 804523 sc-eQTL 4.66e-01 -0.0914 0.125 0.873 pDC L2
ENSG00000286438 AL591115.1 514734 sc-eQTL 3.83e-01 -0.105 0.12 0.873 pDC L2
ENSG00000286887 AL355881.1 -678439 sc-eQTL 9.67e-01 -0.00441 0.106 0.873 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -334308 sc-eQTL 7.91e-01 0.0325 0.122 0.859 B_Memory LOneK1K
ENSG00000112303 VNN2 854403 sc-eQTL 6.66e-01 -0.046 0.106 0.859 B_Memory LOneK1K
ENSG00000112306 RPS12 803293 sc-eQTL 4.13e-01 -0.0496 0.0606 0.859 B_Memory LOneK1K
ENSG00000118515 SGK1 -700250 sc-eQTL 3.50e-01 0.0887 0.0946 0.859 B_Memory LOneK1K
ENSG00000146409 SLC18B1 804523 sc-eQTL 9.24e-01 0.0106 0.111 0.859 B_Memory LOneK1K
ENSG00000028839 TBPL1 -334308 sc-eQTL 9.05e-01 0.0139 0.116 0.859 B_Naive LOneK1K
ENSG00000112303 VNN2 854403 sc-eQTL 1.18e-01 0.159 0.101 0.859 B_Naive LOneK1K
ENSG00000112306 RPS12 803293 sc-eQTL 8.45e-01 -0.0121 0.0616 0.859 B_Naive LOneK1K
ENSG00000118515 SGK1 -700250 sc-eQTL 2.42e-01 -0.112 0.0951 0.859 B_Naive LOneK1K
ENSG00000146409 SLC18B1 804523 sc-eQTL 4.55e-01 -0.087 0.116 0.859 B_Naive LOneK1K
ENSG00000028839 TBPL1 -334308 sc-eQTL 9.57e-01 -0.00506 0.0942 0.859 CD14_Mono LOneK1K
ENSG00000093134 VNN3 883097 sc-eQTL 2.38e-01 -0.126 0.106 0.859 CD14_Mono LOneK1K
ENSG00000112299 VNN1 903807 sc-eQTL 8.18e-02 -0.193 0.111 0.859 CD14_Mono LOneK1K
ENSG00000112303 VNN2 854403 sc-eQTL 9.26e-01 -0.00687 0.0736 0.859 CD14_Mono LOneK1K
ENSG00000112306 RPS12 803293 sc-eQTL 4.37e-03 -0.143 0.0495 0.859 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -700250 sc-eQTL 7.23e-02 0.123 0.0683 0.859 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 804523 sc-eQTL 7.80e-01 0.0251 0.0898 0.859 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -678439 sc-eQTL 1.69e-01 0.129 0.0938 0.859 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -334308 sc-eQTL 3.82e-01 0.107 0.122 0.86 CD16_Mono LOneK1K
ENSG00000093134 VNN3 883097 sc-eQTL 7.50e-01 0.0377 0.119 0.86 CD16_Mono LOneK1K
ENSG00000112299 VNN1 903807 sc-eQTL 6.00e-01 -0.0616 0.117 0.86 CD16_Mono LOneK1K
ENSG00000112303 VNN2 854403 sc-eQTL 5.44e-01 0.0673 0.111 0.86 CD16_Mono LOneK1K
ENSG00000112306 RPS12 803293 sc-eQTL 8.42e-01 0.00937 0.047 0.86 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -700250 sc-eQTL 3.95e-02 0.146 0.0704 0.86 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 804523 sc-eQTL 1.87e-01 0.15 0.114 0.86 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -678439 sc-eQTL 1.56e-02 0.248 0.102 0.86 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -334308 sc-eQTL 5.70e-01 -0.0558 0.0981 0.862 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 854403 sc-eQTL 6.04e-01 0.0606 0.117 0.862 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 803293 sc-eQTL 9.37e-01 -0.00377 0.0476 0.862 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -700250 sc-eQTL 2.30e-04 0.357 0.0953 0.862 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000093134 VNN3 883097 eQTL 0.0456 -0.0412 0.0206 0.0 0.0 0.146
ENSG00000112299 VNN1 903807 eQTL 0.0046 -0.0868 0.0306 0.0244 0.0 0.146

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina