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Genes within 1Mb (chr6:133603896:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -348274 sc-eQTL 6.60e-01 0.0468 0.106 0.831 B L1
ENSG00000112303 VNN2 840437 sc-eQTL 2.82e-01 0.0855 0.0792 0.831 B L1
ENSG00000112306 RPS12 789327 sc-eQTL 3.29e-01 -0.0469 0.0479 0.831 B L1
ENSG00000118515 SGK1 -714216 sc-eQTL 2.95e-01 -0.0776 0.0739 0.831 B L1
ENSG00000146409 SLC18B1 790557 sc-eQTL 5.33e-01 -0.063 0.101 0.831 B L1
ENSG00000028839 TBPL1 -348274 sc-eQTL 8.48e-01 -0.015 0.0778 0.831 CD4T L1
ENSG00000112303 VNN2 840437 sc-eQTL 1.77e-01 0.0945 0.0698 0.831 CD4T L1
ENSG00000112306 RPS12 789327 sc-eQTL 6.20e-04 -0.161 0.0463 0.831 CD4T L1
ENSG00000118515 SGK1 -714216 sc-eQTL 8.31e-02 -0.111 0.0636 0.831 CD4T L1
ENSG00000146409 SLC18B1 790557 sc-eQTL 1.65e-01 -0.134 0.0959 0.831 CD4T L1
ENSG00000028839 TBPL1 -348274 sc-eQTL 2.05e-01 0.0966 0.076 0.831 CD8T L1
ENSG00000112303 VNN2 840437 sc-eQTL 6.33e-01 0.0444 0.0929 0.831 CD8T L1
ENSG00000112306 RPS12 789327 sc-eQTL 8.52e-02 -0.0545 0.0315 0.831 CD8T L1
ENSG00000118515 SGK1 -714216 sc-eQTL 8.41e-01 -0.0098 0.0489 0.831 CD8T L1
ENSG00000146409 SLC18B1 790557 sc-eQTL 2.81e-01 0.103 0.0957 0.831 CD8T L1
ENSG00000028839 TBPL1 -348274 sc-eQTL 7.33e-01 -0.0402 0.118 0.829 DC L1
ENSG00000093134 VNN3 869131 sc-eQTL 8.59e-01 0.0162 0.0908 0.829 DC L1
ENSG00000112299 VNN1 889841 sc-eQTL 3.75e-01 -0.087 0.0979 0.829 DC L1
ENSG00000112303 VNN2 840437 sc-eQTL 2.82e-01 0.113 0.105 0.829 DC L1
ENSG00000112306 RPS12 789327 sc-eQTL 1.30e-01 -0.0888 0.0585 0.829 DC L1
ENSG00000118515 SGK1 -714216 sc-eQTL 3.58e-01 0.0627 0.0681 0.829 DC L1
ENSG00000146409 SLC18B1 790557 sc-eQTL 4.47e-01 -0.0709 0.0929 0.829 DC L1
ENSG00000286438 AL591115.1 500768 sc-eQTL 3.49e-01 -0.0793 0.0845 0.829 DC L1
ENSG00000286887 AL355881.1 -692405 sc-eQTL 2.10e-01 0.132 0.105 0.829 DC L1
ENSG00000028839 TBPL1 -348274 sc-eQTL 6.90e-01 -0.0329 0.0824 0.831 Mono L1
ENSG00000093134 VNN3 869131 sc-eQTL 7.81e-02 -0.166 0.094 0.831 Mono L1
ENSG00000112299 VNN1 889841 sc-eQTL 8.13e-02 -0.177 0.101 0.831 Mono L1
ENSG00000112303 VNN2 840437 sc-eQTL 4.84e-01 -0.0503 0.0718 0.831 Mono L1
ENSG00000112306 RPS12 789327 sc-eQTL 8.52e-02 -0.074 0.0428 0.831 Mono L1
ENSG00000118515 SGK1 -714216 sc-eQTL 1.07e-01 0.0978 0.0605 0.831 Mono L1
ENSG00000146409 SLC18B1 790557 sc-eQTL 6.09e-01 0.0436 0.0852 0.831 Mono L1
ENSG00000286887 AL355881.1 -692405 sc-eQTL 1.63e-01 0.117 0.0834 0.831 Mono L1
ENSG00000028839 TBPL1 -348274 sc-eQTL 4.22e-01 -0.072 0.0896 0.833 NK L1
ENSG00000112303 VNN2 840437 sc-eQTL 8.95e-01 0.0137 0.103 0.833 NK L1
ENSG00000112306 RPS12 789327 sc-eQTL 8.36e-01 -0.00884 0.0427 0.833 NK L1
ENSG00000118515 SGK1 -714216 sc-eQTL 1.72e-02 0.187 0.0779 0.833 NK L1
ENSG00000028839 TBPL1 -348274 sc-eQTL 3.76e-01 0.0963 0.109 0.831 Other_T L1
ENSG00000112303 VNN2 840437 sc-eQTL 4.65e-01 0.0757 0.103 0.831 Other_T L1
ENSG00000112306 RPS12 789327 sc-eQTL 9.61e-01 -0.00201 0.041 0.831 Other_T L1
ENSG00000118515 SGK1 -714216 sc-eQTL 2.68e-01 -0.0837 0.0753 0.831 Other_T L1
ENSG00000146409 SLC18B1 790557 sc-eQTL 8.97e-03 -0.292 0.111 0.831 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -348274 sc-eQTL 9.00e-01 -0.0158 0.125 0.839 B_Activated L2
ENSG00000112303 VNN2 840437 sc-eQTL 6.82e-01 -0.0469 0.114 0.839 B_Activated L2
ENSG00000112306 RPS12 789327 sc-eQTL 4.78e-02 -0.121 0.0605 0.839 B_Activated L2
ENSG00000118515 SGK1 -714216 sc-eQTL 6.79e-01 -0.0453 0.109 0.839 B_Activated L2
ENSG00000146409 SLC18B1 790557 sc-eQTL 8.51e-01 0.0201 0.107 0.839 B_Activated L2
ENSG00000028839 TBPL1 -348274 sc-eQTL 7.84e-01 0.0319 0.116 0.833 B_Intermediate L2
ENSG00000112303 VNN2 840437 sc-eQTL 5.85e-01 -0.0549 0.1 0.833 B_Intermediate L2
ENSG00000112306 RPS12 789327 sc-eQTL 7.91e-02 -0.108 0.0611 0.833 B_Intermediate L2
ENSG00000118515 SGK1 -714216 sc-eQTL 2.67e-01 0.118 0.106 0.833 B_Intermediate L2
ENSG00000146409 SLC18B1 790557 sc-eQTL 8.76e-01 0.0173 0.111 0.833 B_Intermediate L2
ENSG00000028839 TBPL1 -348274 sc-eQTL 8.38e-01 0.0228 0.111 0.832 B_Memory L2
ENSG00000112303 VNN2 840437 sc-eQTL 1.12e-01 -0.167 0.105 0.832 B_Memory L2
ENSG00000112306 RPS12 789327 sc-eQTL 5.97e-02 -0.0954 0.0504 0.832 B_Memory L2
ENSG00000118515 SGK1 -714216 sc-eQTL 2.04e-01 -0.118 0.0928 0.832 B_Memory L2
ENSG00000146409 SLC18B1 790557 sc-eQTL 3.24e-01 -0.104 0.106 0.832 B_Memory L2
ENSG00000028839 TBPL1 -348274 sc-eQTL 8.94e-01 0.0141 0.106 0.831 B_Naive1 L2
ENSG00000112303 VNN2 840437 sc-eQTL 1.25e-01 0.151 0.0981 0.831 B_Naive1 L2
ENSG00000112306 RPS12 789327 sc-eQTL 3.66e-01 -0.0508 0.056 0.831 B_Naive1 L2
ENSG00000118515 SGK1 -714216 sc-eQTL 2.43e-01 -0.102 0.0876 0.831 B_Naive1 L2
ENSG00000146409 SLC18B1 790557 sc-eQTL 4.46e-01 -0.0827 0.108 0.831 B_Naive1 L2
ENSG00000028839 TBPL1 -348274 sc-eQTL 5.55e-01 0.0662 0.112 0.83 B_Naive2 L2
ENSG00000112303 VNN2 840437 sc-eQTL 9.96e-01 0.000595 0.109 0.83 B_Naive2 L2
ENSG00000112306 RPS12 789327 sc-eQTL 3.62e-01 -0.0527 0.0577 0.83 B_Naive2 L2
ENSG00000118515 SGK1 -714216 sc-eQTL 8.31e-01 -0.0218 0.102 0.83 B_Naive2 L2
ENSG00000146409 SLC18B1 790557 sc-eQTL 3.16e-01 -0.111 0.11 0.83 B_Naive2 L2
ENSG00000028839 TBPL1 -348274 sc-eQTL 1.98e-01 -0.14 0.108 0.827 CD4_CTL L2
ENSG00000112303 VNN2 840437 sc-eQTL 9.23e-01 0.0106 0.109 0.827 CD4_CTL L2
ENSG00000112306 RPS12 789327 sc-eQTL 5.71e-02 -0.0954 0.0498 0.827 CD4_CTL L2
ENSG00000118515 SGK1 -714216 sc-eQTL 2.33e-01 0.104 0.0869 0.827 CD4_CTL L2
ENSG00000146409 SLC18B1 790557 sc-eQTL 6.85e-01 -0.0412 0.101 0.827 CD4_CTL L2
ENSG00000028839 TBPL1 -348274 sc-eQTL 8.69e-01 -0.0147 0.0886 0.831 CD4_Naive L2
ENSG00000112303 VNN2 840437 sc-eQTL 3.71e-02 0.167 0.0797 0.831 CD4_Naive L2
ENSG00000112306 RPS12 789327 sc-eQTL 5.57e-03 -0.144 0.0513 0.831 CD4_Naive L2
ENSG00000118515 SGK1 -714216 sc-eQTL 1.55e-01 -0.0908 0.0636 0.831 CD4_Naive L2
ENSG00000146409 SLC18B1 790557 sc-eQTL 6.82e-01 -0.0413 0.1 0.831 CD4_Naive L2
ENSG00000028839 TBPL1 -348274 sc-eQTL 3.26e-01 -0.0932 0.0947 0.831 CD4_TCM L2
ENSG00000112303 VNN2 840437 sc-eQTL 8.12e-01 -0.0225 0.0942 0.831 CD4_TCM L2
ENSG00000112306 RPS12 789327 sc-eQTL 7.63e-04 -0.162 0.0475 0.831 CD4_TCM L2
ENSG00000118515 SGK1 -714216 sc-eQTL 1.16e-01 -0.107 0.0679 0.831 CD4_TCM L2
ENSG00000146409 SLC18B1 790557 sc-eQTL 4.29e-01 -0.0895 0.113 0.831 CD4_TCM L2
ENSG00000028839 TBPL1 -348274 sc-eQTL 5.09e-01 0.0724 0.109 0.831 CD4_TEM L2
ENSG00000112303 VNN2 840437 sc-eQTL 2.03e-03 -0.321 0.103 0.831 CD4_TEM L2
ENSG00000112306 RPS12 789327 sc-eQTL 6.60e-02 -0.0791 0.0428 0.831 CD4_TEM L2
ENSG00000118515 SGK1 -714216 sc-eQTL 3.73e-01 -0.0661 0.074 0.831 CD4_TEM L2
ENSG00000146409 SLC18B1 790557 sc-eQTL 4.93e-01 -0.0737 0.107 0.831 CD4_TEM L2
ENSG00000028839 TBPL1 -348274 sc-eQTL 6.17e-01 -0.0499 0.0998 0.831 CD8_CTL L2
ENSG00000112303 VNN2 840437 sc-eQTL 7.51e-01 -0.0336 0.106 0.831 CD8_CTL L2
ENSG00000112306 RPS12 789327 sc-eQTL 8.64e-01 0.00971 0.0567 0.831 CD8_CTL L2
ENSG00000118515 SGK1 -714216 sc-eQTL 1.56e-04 0.357 0.0926 0.831 CD8_CTL L2
ENSG00000146409 SLC18B1 790557 sc-eQTL 3.00e-01 0.114 0.11 0.831 CD8_CTL L2
ENSG00000028839 TBPL1 -348274 sc-eQTL 2.50e-01 0.119 0.103 0.831 CD8_Naive L2
ENSG00000112303 VNN2 840437 sc-eQTL 8.63e-01 0.0164 0.0953 0.831 CD8_Naive L2
ENSG00000112306 RPS12 789327 sc-eQTL 6.35e-03 -0.148 0.0536 0.831 CD8_Naive L2
ENSG00000118515 SGK1 -714216 sc-eQTL 1.61e-01 -0.0958 0.0681 0.831 CD8_Naive L2
ENSG00000146409 SLC18B1 790557 sc-eQTL 7.58e-01 -0.0337 0.109 0.831 CD8_Naive L2
ENSG00000028839 TBPL1 -348274 sc-eQTL 2.60e-01 -0.131 0.116 0.829 CD8_TCM L2
ENSG00000112303 VNN2 840437 sc-eQTL 4.27e-01 -0.0852 0.107 0.829 CD8_TCM L2
ENSG00000112306 RPS12 789327 sc-eQTL 1.40e-01 -0.077 0.0519 0.829 CD8_TCM L2
ENSG00000118515 SGK1 -714216 sc-eQTL 3.84e-01 0.0753 0.0863 0.829 CD8_TCM L2
ENSG00000146409 SLC18B1 790557 sc-eQTL 9.44e-01 -0.00806 0.114 0.829 CD8_TCM L2
ENSG00000028839 TBPL1 -348274 sc-eQTL 4.24e-01 0.0872 0.109 0.836 CD8_TEM L2
ENSG00000112303 VNN2 840437 sc-eQTL 3.32e-02 0.251 0.117 0.836 CD8_TEM L2
ENSG00000112306 RPS12 789327 sc-eQTL 2.27e-01 -0.077 0.0634 0.836 CD8_TEM L2
ENSG00000118515 SGK1 -714216 sc-eQTL 6.72e-01 0.0443 0.104 0.836 CD8_TEM L2
ENSG00000146409 SLC18B1 790557 sc-eQTL 5.88e-01 -0.0652 0.12 0.836 CD8_TEM L2
ENSG00000028839 TBPL1 -348274 sc-eQTL 7.10e-01 0.041 0.11 0.831 MAIT L2
ENSG00000112303 VNN2 840437 sc-eQTL 5.93e-01 0.0569 0.106 0.831 MAIT L2
ENSG00000112306 RPS12 789327 sc-eQTL 4.39e-01 -0.0405 0.0522 0.831 MAIT L2
ENSG00000118515 SGK1 -714216 sc-eQTL 6.49e-01 0.0335 0.0736 0.831 MAIT L2
ENSG00000146409 SLC18B1 790557 sc-eQTL 2.41e-02 -0.246 0.108 0.831 MAIT L2
ENSG00000028839 TBPL1 -348274 sc-eQTL 1.46e-01 0.17 0.116 0.833 NK_CD56bright L2
ENSG00000112303 VNN2 840437 sc-eQTL 1.40e-01 0.162 0.109 0.833 NK_CD56bright L2
ENSG00000112306 RPS12 789327 sc-eQTL 1.85e-02 -0.144 0.0605 0.833 NK_CD56bright L2
ENSG00000118515 SGK1 -714216 sc-eQTL 6.03e-01 0.0477 0.0916 0.833 NK_CD56bright L2
ENSG00000028839 TBPL1 -348274 sc-eQTL 1.02e-01 -0.158 0.0959 0.834 NK_CD56dim L2
ENSG00000112303 VNN2 840437 sc-eQTL 5.85e-01 0.0604 0.11 0.834 NK_CD56dim L2
ENSG00000112306 RPS12 789327 sc-eQTL 9.58e-01 0.00229 0.0438 0.834 NK_CD56dim L2
ENSG00000118515 SGK1 -714216 sc-eQTL 3.08e-02 0.209 0.096 0.834 NK_CD56dim L2
ENSG00000028839 TBPL1 -348274 sc-eQTL 9.11e-02 -0.207 0.122 0.838 NK_HLA L2
ENSG00000112303 VNN2 840437 sc-eQTL 2.68e-01 -0.125 0.113 0.838 NK_HLA L2
ENSG00000112306 RPS12 789327 sc-eQTL 2.57e-01 -0.0598 0.0525 0.838 NK_HLA L2
ENSG00000118515 SGK1 -714216 sc-eQTL 3.24e-01 -0.103 0.104 0.838 NK_HLA L2
ENSG00000028839 TBPL1 -348274 sc-eQTL 9.89e-01 0.00138 0.0991 0.834 NK_cytokine L2
ENSG00000112303 VNN2 840437 sc-eQTL 8.39e-01 -0.0219 0.108 0.834 NK_cytokine L2
ENSG00000112306 RPS12 789327 sc-eQTL 5.72e-01 0.0331 0.0585 0.834 NK_cytokine L2
ENSG00000118515 SGK1 -714216 sc-eQTL 8.17e-02 0.169 0.0967 0.834 NK_cytokine L2
ENSG00000028839 TBPL1 -348274 sc-eQTL 4.54e-01 0.11 0.146 0.848 PB L2
ENSG00000112303 VNN2 840437 sc-eQTL 3.63e-01 0.116 0.127 0.848 PB L2
ENSG00000112306 RPS12 789327 sc-eQTL 9.14e-01 0.00782 0.0722 0.848 PB L2
ENSG00000118515 SGK1 -714216 sc-eQTL 5.34e-01 -0.0725 0.116 0.848 PB L2
ENSG00000146409 SLC18B1 790557 sc-eQTL 2.11e-01 -0.169 0.134 0.848 PB L2
ENSG00000028839 TBPL1 -348274 sc-eQTL 1.80e-01 -0.155 0.115 0.83 Pro_T L2
ENSG00000112303 VNN2 840437 sc-eQTL 8.44e-03 -0.29 0.109 0.83 Pro_T L2
ENSG00000112306 RPS12 789327 sc-eQTL 3.85e-01 -0.0364 0.0418 0.83 Pro_T L2
ENSG00000118515 SGK1 -714216 sc-eQTL 5.93e-01 -0.045 0.0839 0.83 Pro_T L2
ENSG00000146409 SLC18B1 790557 sc-eQTL 9.63e-02 -0.18 0.108 0.83 Pro_T L2
ENSG00000028839 TBPL1 -348274 sc-eQTL 2.00e-01 0.146 0.113 0.831 Treg L2
ENSG00000112303 VNN2 840437 sc-eQTL 5.34e-01 -0.0561 0.0901 0.831 Treg L2
ENSG00000112306 RPS12 789327 sc-eQTL 1.13e-02 -0.1 0.0393 0.831 Treg L2
ENSG00000118515 SGK1 -714216 sc-eQTL 9.58e-01 0.0044 0.084 0.831 Treg L2
ENSG00000146409 SLC18B1 790557 sc-eQTL 1.67e-02 -0.268 0.111 0.831 Treg L2
ENSG00000028839 TBPL1 -348274 sc-eQTL 8.37e-01 -0.025 0.122 0.841 cDC L2
ENSG00000093134 VNN3 869131 sc-eQTL 9.04e-01 0.0115 0.0949 0.841 cDC L2
ENSG00000112299 VNN1 889841 sc-eQTL 6.44e-02 -0.206 0.111 0.841 cDC L2
ENSG00000112303 VNN2 840437 sc-eQTL 1.79e-02 0.256 0.107 0.841 cDC L2
ENSG00000112306 RPS12 789327 sc-eQTL 4.42e-02 -0.108 0.0531 0.841 cDC L2
ENSG00000118515 SGK1 -714216 sc-eQTL 6.23e-01 0.0445 0.0904 0.841 cDC L2
ENSG00000146409 SLC18B1 790557 sc-eQTL 8.01e-01 -0.0268 0.106 0.841 cDC L2
ENSG00000286438 AL591115.1 500768 sc-eQTL 9.73e-01 0.00284 0.085 0.841 cDC L2
ENSG00000286887 AL355881.1 -692405 sc-eQTL 2.26e-02 0.237 0.103 0.841 cDC L2
ENSG00000028839 TBPL1 -348274 sc-eQTL 6.22e-01 -0.0459 0.0929 0.831 cMono_IL1B L2
ENSG00000093134 VNN3 869131 sc-eQTL 1.41e-01 -0.147 0.0992 0.831 cMono_IL1B L2
ENSG00000112299 VNN1 889841 sc-eQTL 2.06e-01 -0.127 0.1 0.831 cMono_IL1B L2
ENSG00000112303 VNN2 840437 sc-eQTL 7.42e-01 -0.0265 0.0804 0.831 cMono_IL1B L2
ENSG00000112306 RPS12 789327 sc-eQTL 1.26e-02 -0.111 0.044 0.831 cMono_IL1B L2
ENSG00000118515 SGK1 -714216 sc-eQTL 1.84e-01 0.0885 0.0663 0.831 cMono_IL1B L2
ENSG00000146409 SLC18B1 790557 sc-eQTL 4.34e-01 0.0675 0.0861 0.831 cMono_IL1B L2
ENSG00000286887 AL355881.1 -692405 sc-eQTL 5.79e-01 0.0498 0.0897 0.831 cMono_IL1B L2
ENSG00000028839 TBPL1 -348274 sc-eQTL 1.11e-01 -0.169 0.106 0.831 cMono_S100A L2
ENSG00000093134 VNN3 869131 sc-eQTL 1.44e-01 -0.14 0.0956 0.831 cMono_S100A L2
ENSG00000112299 VNN1 889841 sc-eQTL 1.48e-01 -0.151 0.104 0.831 cMono_S100A L2
ENSG00000112303 VNN2 840437 sc-eQTL 9.03e-01 -0.00837 0.0684 0.831 cMono_S100A L2
ENSG00000112306 RPS12 789327 sc-eQTL 3.64e-01 -0.0447 0.0491 0.831 cMono_S100A L2
ENSG00000118515 SGK1 -714216 sc-eQTL 1.29e-01 0.0853 0.056 0.831 cMono_S100A L2
ENSG00000146409 SLC18B1 790557 sc-eQTL 8.91e-01 -0.0125 0.0911 0.831 cMono_S100A L2
ENSG00000286887 AL355881.1 -692405 sc-eQTL 4.53e-01 0.0669 0.089 0.831 cMono_S100A L2
ENSG00000028839 TBPL1 -348274 sc-eQTL 4.04e-01 0.117 0.14 0.833 gdT L2
ENSG00000112303 VNN2 840437 sc-eQTL 3.33e-01 0.129 0.133 0.833 gdT L2
ENSG00000112306 RPS12 789327 sc-eQTL 3.47e-01 -0.0478 0.0506 0.833 gdT L2
ENSG00000118515 SGK1 -714216 sc-eQTL 3.21e-01 0.0951 0.0956 0.833 gdT L2
ENSG00000146409 SLC18B1 790557 sc-eQTL 7.03e-01 -0.0501 0.131 0.833 gdT L2
ENSG00000028839 TBPL1 -348274 sc-eQTL 9.42e-01 0.00794 0.109 0.829 intMono L2
ENSG00000093134 VNN3 869131 sc-eQTL 6.06e-01 -0.054 0.105 0.829 intMono L2
ENSG00000112299 VNN1 889841 sc-eQTL 1.85e-01 -0.137 0.103 0.829 intMono L2
ENSG00000112303 VNN2 840437 sc-eQTL 3.95e-01 0.0894 0.105 0.829 intMono L2
ENSG00000112306 RPS12 789327 sc-eQTL 2.09e-01 -0.0575 0.0456 0.829 intMono L2
ENSG00000118515 SGK1 -714216 sc-eQTL 2.50e-02 0.171 0.0759 0.829 intMono L2
ENSG00000146409 SLC18B1 790557 sc-eQTL 6.21e-01 0.0551 0.111 0.829 intMono L2
ENSG00000286887 AL355881.1 -692405 sc-eQTL 3.13e-01 0.108 0.106 0.829 intMono L2
ENSG00000028839 TBPL1 -348274 sc-eQTL 8.48e-01 0.0225 0.117 0.842 ncMono L2
ENSG00000093134 VNN3 869131 sc-eQTL 1.54e-01 0.159 0.111 0.842 ncMono L2
ENSG00000112299 VNN1 889841 sc-eQTL 8.24e-01 -0.0246 0.111 0.842 ncMono L2
ENSG00000112303 VNN2 840437 sc-eQTL 4.40e-01 0.0823 0.106 0.842 ncMono L2
ENSG00000112306 RPS12 789327 sc-eQTL 2.10e-01 0.0669 0.0531 0.842 ncMono L2
ENSG00000118515 SGK1 -714216 sc-eQTL 9.83e-01 -0.00162 0.0755 0.842 ncMono L2
ENSG00000146409 SLC18B1 790557 sc-eQTL 6.92e-01 -0.0373 0.0942 0.842 ncMono L2
ENSG00000286887 AL355881.1 -692405 sc-eQTL 3.72e-02 0.207 0.0985 0.842 ncMono L2
ENSG00000028839 TBPL1 -348274 sc-eQTL 6.19e-01 0.0688 0.138 0.847 pDC L2
ENSG00000093134 VNN3 869131 sc-eQTL 7.78e-01 0.0261 0.0925 0.847 pDC L2
ENSG00000112299 VNN1 889841 sc-eQTL 7.69e-01 -0.0277 0.0941 0.847 pDC L2
ENSG00000112303 VNN2 840437 sc-eQTL 1.16e-01 -0.176 0.111 0.847 pDC L2
ENSG00000112306 RPS12 789327 sc-eQTL 1.09e-01 -0.123 0.0766 0.847 pDC L2
ENSG00000118515 SGK1 -714216 sc-eQTL 5.18e-01 0.0507 0.0783 0.847 pDC L2
ENSG00000146409 SLC18B1 790557 sc-eQTL 1.92e-01 -0.149 0.114 0.847 pDC L2
ENSG00000286438 AL591115.1 500768 sc-eQTL 2.79e-01 -0.118 0.109 0.847 pDC L2
ENSG00000286887 AL355881.1 -692405 sc-eQTL 8.87e-01 0.0138 0.097 0.847 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -348274 sc-eQTL 6.05e-01 0.0576 0.111 0.831 B_Memory LOneK1K
ENSG00000112303 VNN2 840437 sc-eQTL 6.55e-01 -0.0433 0.0968 0.831 B_Memory LOneK1K
ENSG00000112306 RPS12 789327 sc-eQTL 1.03e-01 -0.0897 0.0548 0.831 B_Memory LOneK1K
ENSG00000118515 SGK1 -714216 sc-eQTL 9.76e-01 -0.00262 0.0862 0.831 B_Memory LOneK1K
ENSG00000146409 SLC18B1 790557 sc-eQTL 8.65e-01 0.0172 0.101 0.831 B_Memory LOneK1K
ENSG00000028839 TBPL1 -348274 sc-eQTL 9.15e-01 0.0113 0.106 0.831 B_Naive LOneK1K
ENSG00000112303 VNN2 840437 sc-eQTL 2.38e-01 0.109 0.0921 0.831 B_Naive LOneK1K
ENSG00000112306 RPS12 789327 sc-eQTL 5.06e-01 -0.0372 0.0558 0.831 B_Naive LOneK1K
ENSG00000118515 SGK1 -714216 sc-eQTL 1.89e-01 -0.114 0.0862 0.831 B_Naive LOneK1K
ENSG00000146409 SLC18B1 790557 sc-eQTL 3.40e-01 -0.101 0.105 0.831 B_Naive LOneK1K
ENSG00000028839 TBPL1 -348274 sc-eQTL 3.85e-01 -0.0739 0.0849 0.831 CD14_Mono LOneK1K
ENSG00000093134 VNN3 869131 sc-eQTL 7.93e-02 -0.169 0.0957 0.831 CD14_Mono LOneK1K
ENSG00000112299 VNN1 889841 sc-eQTL 5.91e-02 -0.189 0.0997 0.831 CD14_Mono LOneK1K
ENSG00000112303 VNN2 840437 sc-eQTL 6.29e-01 -0.0322 0.0664 0.831 CD14_Mono LOneK1K
ENSG00000112306 RPS12 789327 sc-eQTL 3.35e-02 -0.0965 0.0451 0.831 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -714216 sc-eQTL 1.20e-01 0.0964 0.0617 0.831 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 790557 sc-eQTL 4.97e-01 0.0551 0.081 0.831 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -692405 sc-eQTL 3.80e-01 0.0746 0.0849 0.831 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -348274 sc-eQTL 6.88e-01 0.0447 0.111 0.832 CD16_Mono LOneK1K
ENSG00000093134 VNN3 869131 sc-eQTL 7.78e-01 0.0303 0.108 0.832 CD16_Mono LOneK1K
ENSG00000112299 VNN1 889841 sc-eQTL 8.47e-01 -0.0206 0.107 0.832 CD16_Mono LOneK1K
ENSG00000112303 VNN2 840437 sc-eQTL 4.98e-01 0.0683 0.101 0.832 CD16_Mono LOneK1K
ENSG00000112306 RPS12 789327 sc-eQTL 7.71e-01 0.0125 0.0427 0.832 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -714216 sc-eQTL 1.35e-01 0.0965 0.0643 0.832 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 790557 sc-eQTL 7.77e-01 0.0294 0.104 0.832 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -692405 sc-eQTL 9.44e-02 0.156 0.0931 0.832 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -348274 sc-eQTL 3.66e-01 -0.0803 0.0886 0.834 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 840437 sc-eQTL 8.41e-01 -0.0212 0.106 0.834 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 789327 sc-eQTL 9.00e-01 -0.00541 0.0431 0.834 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -714216 sc-eQTL 4.17e-03 0.253 0.0872 0.834 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000093134 VNN3 869131 eQTL 0.0235 -0.0453 0.02 0.0 0.0 0.159
ENSG00000112299 VNN1 889841 eQTL 0.0262 -0.0661 0.0297 0.00104 0.0 0.159

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina