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Genes within 1Mb (chr6:133546634:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -405536 sc-eQTL 9.34e-01 0.0117 0.14 0.895 B L1
ENSG00000112303 VNN2 783175 sc-eQTL 4.90e-01 0.0725 0.105 0.895 B L1
ENSG00000112306 RPS12 732065 sc-eQTL 9.08e-01 -0.00734 0.0634 0.895 B L1
ENSG00000118515 SGK1 -771478 sc-eQTL 9.18e-01 0.0101 0.0978 0.895 B L1
ENSG00000146409 SLC18B1 733295 sc-eQTL 8.53e-01 0.0248 0.133 0.895 B L1
ENSG00000028839 TBPL1 -405536 sc-eQTL 6.82e-01 -0.0423 0.103 0.895 CD4T L1
ENSG00000112303 VNN2 783175 sc-eQTL 4.61e-01 -0.0685 0.0928 0.895 CD4T L1
ENSG00000112306 RPS12 732065 sc-eQTL 9.39e-01 0.00487 0.0632 0.895 CD4T L1
ENSG00000118515 SGK1 -771478 sc-eQTL 2.11e-01 -0.106 0.0846 0.895 CD4T L1
ENSG00000146409 SLC18B1 733295 sc-eQTL 4.33e-01 -0.1 0.128 0.895 CD4T L1
ENSG00000028839 TBPL1 -405536 sc-eQTL 6.66e-01 0.0437 0.101 0.895 CD8T L1
ENSG00000112303 VNN2 783175 sc-eQTL 6.19e-01 0.0612 0.123 0.895 CD8T L1
ENSG00000112306 RPS12 732065 sc-eQTL 6.56e-01 0.0187 0.0421 0.895 CD8T L1
ENSG00000118515 SGK1 -771478 sc-eQTL 8.02e-01 -0.0162 0.0648 0.895 CD8T L1
ENSG00000146409 SLC18B1 733295 sc-eQTL 9.01e-01 -0.0158 0.127 0.895 CD8T L1
ENSG00000028839 TBPL1 -405536 sc-eQTL 6.97e-02 0.274 0.15 0.892 DC L1
ENSG00000093134 VNN3 811869 sc-eQTL 9.55e-01 0.00665 0.117 0.892 DC L1
ENSG00000112299 VNN1 832579 sc-eQTL 7.38e-01 0.0423 0.126 0.892 DC L1
ENSG00000112303 VNN2 783175 sc-eQTL 2.84e-01 -0.144 0.134 0.892 DC L1
ENSG00000112306 RPS12 732065 sc-eQTL 5.86e-01 0.0412 0.0756 0.892 DC L1
ENSG00000118515 SGK1 -771478 sc-eQTL 2.33e-01 -0.105 0.0874 0.892 DC L1
ENSG00000146409 SLC18B1 733295 sc-eQTL 7.79e-01 -0.0336 0.12 0.892 DC L1
ENSG00000286438 AL591115.1 443506 sc-eQTL 3.83e-01 -0.095 0.109 0.892 DC L1
ENSG00000286887 AL355881.1 -749667 sc-eQTL 6.30e-01 -0.0655 0.136 0.892 DC L1
ENSG00000028839 TBPL1 -405536 sc-eQTL 3.44e-01 -0.104 0.109 0.895 Mono L1
ENSG00000093134 VNN3 811869 sc-eQTL 3.25e-01 -0.124 0.125 0.895 Mono L1
ENSG00000112299 VNN1 832579 sc-eQTL 7.10e-01 0.0503 0.135 0.895 Mono L1
ENSG00000112303 VNN2 783175 sc-eQTL 1.77e-01 0.129 0.095 0.895 Mono L1
ENSG00000112306 RPS12 732065 sc-eQTL 5.42e-01 -0.0349 0.0571 0.895 Mono L1
ENSG00000118515 SGK1 -771478 sc-eQTL 1.02e-02 -0.206 0.0795 0.895 Mono L1
ENSG00000146409 SLC18B1 733295 sc-eQTL 2.20e-02 0.258 0.112 0.895 Mono L1
ENSG00000286887 AL355881.1 -749667 sc-eQTL 9.97e-02 -0.183 0.11 0.895 Mono L1
ENSG00000028839 TBPL1 -405536 sc-eQTL 7.02e-01 -0.0449 0.117 0.895 NK L1
ENSG00000112303 VNN2 783175 sc-eQTL 9.62e-01 -0.00651 0.135 0.895 NK L1
ENSG00000112306 RPS12 732065 sc-eQTL 3.99e-01 0.0471 0.0558 0.895 NK L1
ENSG00000118515 SGK1 -771478 sc-eQTL 8.71e-01 -0.0167 0.103 0.895 NK L1
ENSG00000028839 TBPL1 -405536 sc-eQTL 5.13e-01 0.0897 0.137 0.895 Other_T L1
ENSG00000112303 VNN2 783175 sc-eQTL 1.16e-01 -0.204 0.13 0.895 Other_T L1
ENSG00000112306 RPS12 732065 sc-eQTL 4.14e-01 -0.0422 0.0516 0.895 Other_T L1
ENSG00000118515 SGK1 -771478 sc-eQTL 3.58e-01 -0.0874 0.0949 0.895 Other_T L1
ENSG00000146409 SLC18B1 733295 sc-eQTL 1.80e-01 0.189 0.141 0.895 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -405536 sc-eQTL 9.05e-01 -0.0196 0.164 0.89 B_Activated L2
ENSG00000112303 VNN2 783175 sc-eQTL 4.57e-01 -0.112 0.15 0.89 B_Activated L2
ENSG00000112306 RPS12 732065 sc-eQTL 4.59e-01 0.0595 0.0801 0.89 B_Activated L2
ENSG00000118515 SGK1 -771478 sc-eQTL 8.47e-02 -0.246 0.142 0.89 B_Activated L2
ENSG00000146409 SLC18B1 733295 sc-eQTL 6.77e-01 0.0586 0.141 0.89 B_Activated L2
ENSG00000028839 TBPL1 -405536 sc-eQTL 8.72e-01 0.0244 0.152 0.895 B_Intermediate L2
ENSG00000112303 VNN2 783175 sc-eQTL 5.17e-01 -0.0851 0.131 0.895 B_Intermediate L2
ENSG00000112306 RPS12 732065 sc-eQTL 6.74e-02 -0.146 0.0797 0.895 B_Intermediate L2
ENSG00000118515 SGK1 -771478 sc-eQTL 7.18e-01 -0.0502 0.139 0.895 B_Intermediate L2
ENSG00000146409 SLC18B1 733295 sc-eQTL 2.31e-01 0.173 0.144 0.895 B_Intermediate L2
ENSG00000028839 TBPL1 -405536 sc-eQTL 8.73e-01 -0.0233 0.146 0.894 B_Memory L2
ENSG00000112303 VNN2 783175 sc-eQTL 4.38e-01 0.107 0.138 0.894 B_Memory L2
ENSG00000112306 RPS12 732065 sc-eQTL 3.26e-01 -0.0652 0.0663 0.894 B_Memory L2
ENSG00000118515 SGK1 -771478 sc-eQTL 2.46e-02 -0.273 0.12 0.894 B_Memory L2
ENSG00000146409 SLC18B1 733295 sc-eQTL 2.89e-01 -0.147 0.138 0.894 B_Memory L2
ENSG00000028839 TBPL1 -405536 sc-eQTL 7.59e-01 0.0424 0.138 0.895 B_Naive1 L2
ENSG00000112303 VNN2 783175 sc-eQTL 1.39e-01 0.19 0.128 0.895 B_Naive1 L2
ENSG00000112306 RPS12 732065 sc-eQTL 4.44e-01 -0.0562 0.0733 0.895 B_Naive1 L2
ENSG00000118515 SGK1 -771478 sc-eQTL 6.83e-01 -0.0469 0.115 0.895 B_Naive1 L2
ENSG00000146409 SLC18B1 733295 sc-eQTL 6.02e-01 0.0738 0.141 0.895 B_Naive1 L2
ENSG00000028839 TBPL1 -405536 sc-eQTL 3.88e-01 0.126 0.145 0.895 B_Naive2 L2
ENSG00000112303 VNN2 783175 sc-eQTL 4.10e-01 0.117 0.142 0.895 B_Naive2 L2
ENSG00000112306 RPS12 732065 sc-eQTL 6.35e-01 -0.0357 0.0752 0.895 B_Naive2 L2
ENSG00000118515 SGK1 -771478 sc-eQTL 8.72e-01 -0.0214 0.133 0.895 B_Naive2 L2
ENSG00000146409 SLC18B1 733295 sc-eQTL 2.65e-01 0.16 0.143 0.895 B_Naive2 L2
ENSG00000028839 TBPL1 -405536 sc-eQTL 4.72e-01 0.106 0.147 0.895 CD4_CTL L2
ENSG00000112303 VNN2 783175 sc-eQTL 3.40e-01 -0.141 0.147 0.895 CD4_CTL L2
ENSG00000112306 RPS12 732065 sc-eQTL 4.55e-01 0.051 0.0681 0.895 CD4_CTL L2
ENSG00000118515 SGK1 -771478 sc-eQTL 8.85e-01 -0.0171 0.118 0.895 CD4_CTL L2
ENSG00000146409 SLC18B1 733295 sc-eQTL 3.88e-01 0.119 0.137 0.895 CD4_CTL L2
ENSG00000028839 TBPL1 -405536 sc-eQTL 5.40e-01 -0.0717 0.117 0.895 CD4_Naive L2
ENSG00000112303 VNN2 783175 sc-eQTL 8.35e-01 -0.0222 0.106 0.895 CD4_Naive L2
ENSG00000112306 RPS12 732065 sc-eQTL 1.12e-01 -0.109 0.0686 0.895 CD4_Naive L2
ENSG00000118515 SGK1 -771478 sc-eQTL 1.88e-01 -0.111 0.0841 0.895 CD4_Naive L2
ENSG00000146409 SLC18B1 733295 sc-eQTL 1.88e-01 -0.175 0.132 0.895 CD4_Naive L2
ENSG00000028839 TBPL1 -405536 sc-eQTL 9.56e-01 -0.00695 0.127 0.895 CD4_TCM L2
ENSG00000112303 VNN2 783175 sc-eQTL 1.81e-01 -0.169 0.126 0.895 CD4_TCM L2
ENSG00000112306 RPS12 732065 sc-eQTL 3.07e-01 0.0668 0.0652 0.895 CD4_TCM L2
ENSG00000118515 SGK1 -771478 sc-eQTL 1.70e-01 -0.125 0.0911 0.895 CD4_TCM L2
ENSG00000146409 SLC18B1 733295 sc-eQTL 3.80e-01 0.133 0.151 0.895 CD4_TCM L2
ENSG00000028839 TBPL1 -405536 sc-eQTL 2.02e-01 0.185 0.144 0.895 CD4_TEM L2
ENSG00000112303 VNN2 783175 sc-eQTL 2.02e-01 -0.178 0.139 0.895 CD4_TEM L2
ENSG00000112306 RPS12 732065 sc-eQTL 7.80e-01 -0.016 0.0571 0.895 CD4_TEM L2
ENSG00000118515 SGK1 -771478 sc-eQTL 6.13e-02 -0.183 0.0973 0.895 CD4_TEM L2
ENSG00000146409 SLC18B1 733295 sc-eQTL 6.17e-01 -0.0711 0.142 0.895 CD4_TEM L2
ENSG00000028839 TBPL1 -405536 sc-eQTL 1.20e-01 0.201 0.129 0.895 CD8_CTL L2
ENSG00000112303 VNN2 783175 sc-eQTL 5.38e-02 0.265 0.137 0.895 CD8_CTL L2
ENSG00000112306 RPS12 732065 sc-eQTL 5.50e-01 -0.0441 0.0736 0.895 CD8_CTL L2
ENSG00000118515 SGK1 -771478 sc-eQTL 1.46e-02 -0.302 0.123 0.895 CD8_CTL L2
ENSG00000146409 SLC18B1 733295 sc-eQTL 5.14e-01 -0.0933 0.143 0.895 CD8_CTL L2
ENSG00000028839 TBPL1 -405536 sc-eQTL 1.76e-01 -0.186 0.137 0.895 CD8_Naive L2
ENSG00000112303 VNN2 783175 sc-eQTL 2.24e-01 -0.154 0.126 0.895 CD8_Naive L2
ENSG00000112306 RPS12 732065 sc-eQTL 2.92e-01 -0.0762 0.0721 0.895 CD8_Naive L2
ENSG00000118515 SGK1 -771478 sc-eQTL 9.12e-01 -0.0101 0.0908 0.895 CD8_Naive L2
ENSG00000146409 SLC18B1 733295 sc-eQTL 5.26e-01 0.0921 0.145 0.895 CD8_Naive L2
ENSG00000028839 TBPL1 -405536 sc-eQTL 7.77e-01 0.0449 0.158 0.896 CD8_TCM L2
ENSG00000112303 VNN2 783175 sc-eQTL 3.73e-01 0.13 0.145 0.896 CD8_TCM L2
ENSG00000112306 RPS12 732065 sc-eQTL 6.00e-01 0.0372 0.0708 0.896 CD8_TCM L2
ENSG00000118515 SGK1 -771478 sc-eQTL 5.62e-02 -0.223 0.116 0.896 CD8_TCM L2
ENSG00000146409 SLC18B1 733295 sc-eQTL 6.70e-01 0.0662 0.155 0.896 CD8_TCM L2
ENSG00000028839 TBPL1 -405536 sc-eQTL 8.62e-01 0.0243 0.139 0.89 CD8_TEM L2
ENSG00000112303 VNN2 783175 sc-eQTL 8.52e-01 -0.0282 0.151 0.89 CD8_TEM L2
ENSG00000112306 RPS12 732065 sc-eQTL 8.88e-01 0.0115 0.0814 0.89 CD8_TEM L2
ENSG00000118515 SGK1 -771478 sc-eQTL 4.77e-01 -0.0948 0.133 0.89 CD8_TEM L2
ENSG00000146409 SLC18B1 733295 sc-eQTL 9.22e-01 -0.0151 0.154 0.89 CD8_TEM L2
ENSG00000028839 TBPL1 -405536 sc-eQTL 7.74e-01 0.0419 0.146 0.894 MAIT L2
ENSG00000112303 VNN2 783175 sc-eQTL 2.60e-01 -0.159 0.14 0.894 MAIT L2
ENSG00000112306 RPS12 732065 sc-eQTL 8.92e-01 0.00938 0.0693 0.894 MAIT L2
ENSG00000118515 SGK1 -771478 sc-eQTL 8.69e-01 -0.0161 0.0976 0.894 MAIT L2
ENSG00000146409 SLC18B1 733295 sc-eQTL 8.48e-01 -0.0279 0.145 0.894 MAIT L2
ENSG00000028839 TBPL1 -405536 sc-eQTL 2.12e-02 0.363 0.156 0.896 NK_CD56bright L2
ENSG00000112303 VNN2 783175 sc-eQTL 4.70e-01 -0.108 0.149 0.896 NK_CD56bright L2
ENSG00000112306 RPS12 732065 sc-eQTL 1.47e-01 0.12 0.0826 0.896 NK_CD56bright L2
ENSG00000118515 SGK1 -771478 sc-eQTL 7.19e-01 -0.0447 0.124 0.896 NK_CD56bright L2
ENSG00000028839 TBPL1 -405536 sc-eQTL 8.83e-01 0.0187 0.127 0.894 NK_CD56dim L2
ENSG00000112303 VNN2 783175 sc-eQTL 7.25e-01 0.0512 0.145 0.894 NK_CD56dim L2
ENSG00000112306 RPS12 732065 sc-eQTL 4.55e-01 0.0431 0.0576 0.894 NK_CD56dim L2
ENSG00000118515 SGK1 -771478 sc-eQTL 3.71e-01 -0.114 0.128 0.894 NK_CD56dim L2
ENSG00000028839 TBPL1 -405536 sc-eQTL 7.58e-01 -0.0492 0.16 0.895 NK_HLA L2
ENSG00000112303 VNN2 783175 sc-eQTL 5.26e-01 0.0934 0.147 0.895 NK_HLA L2
ENSG00000112306 RPS12 732065 sc-eQTL 1.64e-01 0.0953 0.0682 0.895 NK_HLA L2
ENSG00000118515 SGK1 -771478 sc-eQTL 5.58e-01 0.0796 0.135 0.895 NK_HLA L2
ENSG00000028839 TBPL1 -405536 sc-eQTL 4.14e-02 -0.266 0.13 0.894 NK_cytokine L2
ENSG00000112303 VNN2 783175 sc-eQTL 4.99e-01 -0.0964 0.143 0.894 NK_cytokine L2
ENSG00000112306 RPS12 732065 sc-eQTL 6.34e-01 0.0369 0.0774 0.894 NK_cytokine L2
ENSG00000118515 SGK1 -771478 sc-eQTL 1.65e-01 0.179 0.128 0.894 NK_cytokine L2
ENSG00000028839 TBPL1 -405536 sc-eQTL 8.44e-01 -0.0344 0.174 0.893 PB L2
ENSG00000112303 VNN2 783175 sc-eQTL 6.92e-01 -0.0601 0.151 0.893 PB L2
ENSG00000112306 RPS12 732065 sc-eQTL 2.65e-02 0.189 0.0841 0.893 PB L2
ENSG00000118515 SGK1 -771478 sc-eQTL 4.99e-01 -0.094 0.139 0.893 PB L2
ENSG00000146409 SLC18B1 733295 sc-eQTL 2.64e-02 -0.355 0.158 0.893 PB L2
ENSG00000028839 TBPL1 -405536 sc-eQTL 7.03e-02 0.263 0.145 0.893 Pro_T L2
ENSG00000112303 VNN2 783175 sc-eQTL 2.96e-01 0.146 0.139 0.893 Pro_T L2
ENSG00000112306 RPS12 732065 sc-eQTL 3.13e-01 0.0533 0.0527 0.893 Pro_T L2
ENSG00000118515 SGK1 -771478 sc-eQTL 1.94e-01 -0.137 0.105 0.893 Pro_T L2
ENSG00000146409 SLC18B1 733295 sc-eQTL 9.70e-01 0.00516 0.137 0.893 Pro_T L2
ENSG00000028839 TBPL1 -405536 sc-eQTL 1.57e-01 -0.211 0.148 0.895 Treg L2
ENSG00000112303 VNN2 783175 sc-eQTL 5.66e-02 0.225 0.117 0.895 Treg L2
ENSG00000112306 RPS12 732065 sc-eQTL 6.04e-01 -0.0272 0.0523 0.895 Treg L2
ENSG00000118515 SGK1 -771478 sc-eQTL 9.11e-01 -0.0123 0.11 0.895 Treg L2
ENSG00000146409 SLC18B1 733295 sc-eQTL 7.84e-01 0.0406 0.148 0.895 Treg L2
ENSG00000028839 TBPL1 -405536 sc-eQTL 2.41e-01 0.184 0.157 0.888 cDC L2
ENSG00000093134 VNN3 811869 sc-eQTL 4.21e-01 -0.0986 0.122 0.888 cDC L2
ENSG00000112299 VNN1 832579 sc-eQTL 6.63e-01 0.0629 0.144 0.888 cDC L2
ENSG00000112303 VNN2 783175 sc-eQTL 9.53e-01 0.00832 0.14 0.888 cDC L2
ENSG00000112306 RPS12 732065 sc-eQTL 6.83e-01 0.0283 0.0693 0.888 cDC L2
ENSG00000118515 SGK1 -771478 sc-eQTL 3.15e-02 -0.25 0.115 0.888 cDC L2
ENSG00000146409 SLC18B1 733295 sc-eQTL 6.34e-01 0.0654 0.137 0.888 cDC L2
ENSG00000286438 AL591115.1 443506 sc-eQTL 2.93e-01 -0.115 0.109 0.888 cDC L2
ENSG00000286887 AL355881.1 -749667 sc-eQTL 1.76e-01 -0.183 0.134 0.888 cDC L2
ENSG00000028839 TBPL1 -405536 sc-eQTL 1.01e-01 -0.204 0.123 0.895 cMono_IL1B L2
ENSG00000093134 VNN3 811869 sc-eQTL 2.22e-01 -0.163 0.133 0.895 cMono_IL1B L2
ENSG00000112299 VNN1 832579 sc-eQTL 9.26e-01 -0.0125 0.134 0.895 cMono_IL1B L2
ENSG00000112303 VNN2 783175 sc-eQTL 3.97e-01 0.091 0.107 0.895 cMono_IL1B L2
ENSG00000112306 RPS12 732065 sc-eQTL 4.74e-01 -0.0428 0.0596 0.895 cMono_IL1B L2
ENSG00000118515 SGK1 -771478 sc-eQTL 1.44e-02 -0.217 0.0878 0.895 cMono_IL1B L2
ENSG00000146409 SLC18B1 733295 sc-eQTL 1.90e-01 0.151 0.115 0.895 cMono_IL1B L2
ENSG00000286887 AL355881.1 -749667 sc-eQTL 9.71e-02 -0.199 0.119 0.895 cMono_IL1B L2
ENSG00000028839 TBPL1 -405536 sc-eQTL 9.95e-01 0.000869 0.142 0.895 cMono_S100A L2
ENSG00000093134 VNN3 811869 sc-eQTL 2.99e-01 0.133 0.128 0.895 cMono_S100A L2
ENSG00000112299 VNN1 832579 sc-eQTL 8.56e-01 -0.0253 0.139 0.895 cMono_S100A L2
ENSG00000112303 VNN2 783175 sc-eQTL 5.80e-01 0.0504 0.091 0.895 cMono_S100A L2
ENSG00000112306 RPS12 732065 sc-eQTL 9.98e-01 -0.000198 0.0656 0.895 cMono_S100A L2
ENSG00000118515 SGK1 -771478 sc-eQTL 1.51e-02 -0.181 0.074 0.895 cMono_S100A L2
ENSG00000146409 SLC18B1 733295 sc-eQTL 1.28e-01 0.184 0.121 0.895 cMono_S100A L2
ENSG00000286887 AL355881.1 -749667 sc-eQTL 4.73e-01 0.0854 0.119 0.895 cMono_S100A L2
ENSG00000028839 TBPL1 -405536 sc-eQTL 6.86e-01 0.0803 0.198 0.9 gdT L2
ENSG00000112303 VNN2 783175 sc-eQTL 9.03e-01 -0.023 0.189 0.9 gdT L2
ENSG00000112306 RPS12 732065 sc-eQTL 2.61e-01 -0.0808 0.0716 0.9 gdT L2
ENSG00000118515 SGK1 -771478 sc-eQTL 9.97e-02 -0.223 0.134 0.9 gdT L2
ENSG00000146409 SLC18B1 733295 sc-eQTL 3.98e-02 0.38 0.183 0.9 gdT L2
ENSG00000028839 TBPL1 -405536 sc-eQTL 3.13e-01 -0.147 0.146 0.898 intMono L2
ENSG00000093134 VNN3 811869 sc-eQTL 2.31e-01 -0.168 0.14 0.898 intMono L2
ENSG00000112299 VNN1 832579 sc-eQTL 1.04e-01 -0.226 0.138 0.898 intMono L2
ENSG00000112303 VNN2 783175 sc-eQTL 9.90e-01 -0.00178 0.141 0.898 intMono L2
ENSG00000112306 RPS12 732065 sc-eQTL 9.67e-01 -0.00255 0.0615 0.898 intMono L2
ENSG00000118515 SGK1 -771478 sc-eQTL 8.95e-02 -0.175 0.103 0.898 intMono L2
ENSG00000146409 SLC18B1 733295 sc-eQTL 1.68e-01 0.206 0.149 0.898 intMono L2
ENSG00000286887 AL355881.1 -749667 sc-eQTL 5.24e-02 -0.277 0.142 0.898 intMono L2
ENSG00000028839 TBPL1 -405536 sc-eQTL 6.79e-01 -0.0627 0.152 0.898 ncMono L2
ENSG00000093134 VNN3 811869 sc-eQTL 1.83e-01 -0.192 0.144 0.898 ncMono L2
ENSG00000112299 VNN1 832579 sc-eQTL 9.37e-01 -0.0114 0.144 0.898 ncMono L2
ENSG00000112303 VNN2 783175 sc-eQTL 3.60e-01 0.126 0.138 0.898 ncMono L2
ENSG00000112306 RPS12 732065 sc-eQTL 9.66e-01 0.003 0.0693 0.898 ncMono L2
ENSG00000118515 SGK1 -771478 sc-eQTL 2.29e-01 -0.118 0.0976 0.898 ncMono L2
ENSG00000146409 SLC18B1 733295 sc-eQTL 5.90e-01 0.0659 0.122 0.898 ncMono L2
ENSG00000286887 AL355881.1 -749667 sc-eQTL 7.04e-02 -0.233 0.128 0.898 ncMono L2
ENSG00000028839 TBPL1 -405536 sc-eQTL 3.32e-01 0.169 0.173 0.893 pDC L2
ENSG00000093134 VNN3 811869 sc-eQTL 5.16e-01 0.0757 0.116 0.893 pDC L2
ENSG00000112299 VNN1 832579 sc-eQTL 9.53e-02 0.197 0.118 0.893 pDC L2
ENSG00000112303 VNN2 783175 sc-eQTL 6.44e-01 -0.0654 0.141 0.893 pDC L2
ENSG00000112306 RPS12 732065 sc-eQTL 7.47e-01 0.0315 0.0973 0.893 pDC L2
ENSG00000118515 SGK1 -771478 sc-eQTL 4.23e-01 -0.0793 0.0987 0.893 pDC L2
ENSG00000146409 SLC18B1 733295 sc-eQTL 9.20e-01 -0.0145 0.144 0.893 pDC L2
ENSG00000286438 AL591115.1 443506 sc-eQTL 7.57e-01 -0.0427 0.138 0.893 pDC L2
ENSG00000286887 AL355881.1 -749667 sc-eQTL 4.55e-01 0.0914 0.122 0.893 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -405536 sc-eQTL 4.24e-01 -0.118 0.148 0.895 B_Memory LOneK1K
ENSG00000112303 VNN2 783175 sc-eQTL 5.72e-01 -0.073 0.129 0.895 B_Memory LOneK1K
ENSG00000112306 RPS12 732065 sc-eQTL 1.58e-01 -0.104 0.0732 0.895 B_Memory LOneK1K
ENSG00000118515 SGK1 -771478 sc-eQTL 2.33e-01 -0.137 0.115 0.895 B_Memory LOneK1K
ENSG00000146409 SLC18B1 733295 sc-eQTL 4.32e-01 0.106 0.135 0.895 B_Memory LOneK1K
ENSG00000028839 TBPL1 -405536 sc-eQTL 6.29e-01 0.0664 0.137 0.895 B_Naive LOneK1K
ENSG00000112303 VNN2 783175 sc-eQTL 8.94e-02 0.203 0.119 0.895 B_Naive LOneK1K
ENSG00000112306 RPS12 732065 sc-eQTL 4.22e-01 -0.0583 0.0725 0.895 B_Naive LOneK1K
ENSG00000118515 SGK1 -771478 sc-eQTL 7.32e-01 -0.0386 0.112 0.895 B_Naive LOneK1K
ENSG00000146409 SLC18B1 733295 sc-eQTL 4.40e-01 0.106 0.137 0.895 B_Naive LOneK1K
ENSG00000028839 TBPL1 -405536 sc-eQTL 2.96e-01 -0.119 0.113 0.895 CD14_Mono LOneK1K
ENSG00000093134 VNN3 811869 sc-eQTL 4.91e-01 -0.0888 0.129 0.895 CD14_Mono LOneK1K
ENSG00000112299 VNN1 832579 sc-eQTL 9.83e-01 0.0028 0.134 0.895 CD14_Mono LOneK1K
ENSG00000112303 VNN2 783175 sc-eQTL 1.96e-01 0.115 0.0885 0.895 CD14_Mono LOneK1K
ENSG00000112306 RPS12 732065 sc-eQTL 5.62e-01 -0.0353 0.0609 0.895 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -771478 sc-eQTL 7.24e-03 -0.221 0.0816 0.895 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 733295 sc-eQTL 3.47e-02 0.228 0.107 0.895 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -749667 sc-eQTL 1.84e-01 -0.151 0.113 0.895 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -405536 sc-eQTL 4.13e-01 -0.12 0.147 0.894 CD16_Mono LOneK1K
ENSG00000093134 VNN3 811869 sc-eQTL 6.98e-03 -0.381 0.14 0.894 CD16_Mono LOneK1K
ENSG00000112299 VNN1 832579 sc-eQTL 4.41e-01 -0.109 0.141 0.894 CD16_Mono LOneK1K
ENSG00000112303 VNN2 783175 sc-eQTL 2.73e-01 0.146 0.133 0.894 CD16_Mono LOneK1K
ENSG00000112306 RPS12 732065 sc-eQTL 5.53e-01 0.0336 0.0564 0.894 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -771478 sc-eQTL 1.80e-01 -0.114 0.0851 0.894 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 733295 sc-eQTL 9.01e-02 0.232 0.136 0.894 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -749667 sc-eQTL 5.72e-03 -0.34 0.122 0.894 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -405536 sc-eQTL 1.69e-01 -0.16 0.116 0.894 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 783175 sc-eQTL 9.82e-01 -0.00309 0.138 0.894 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 732065 sc-eQTL 3.27e-01 0.0553 0.0563 0.894 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -771478 sc-eQTL 6.14e-01 0.059 0.117 0.894 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000093134 VNN3 811869 eQTL 0.000374 0.0793 0.0222 0.0 0.0 0.118
ENSG00000112299 VNN1 832579 pQTL 0.00331 -0.158 0.0535 0.0 0.0 0.117
ENSG00000112299 VNN1 832579 eQTL 0.00996 -0.0856 0.0331 0.0 0.0 0.118
ENSG00000112303 VNN2 783175 pQTL 0.000632 0.132 0.0385 0.0 0.0 0.117
ENSG00000146409 SLC18B1 733295 eQTL 0.0137 0.0841 0.034 0.0 0.0 0.118
ENSG00000234484 AL032821.1 793959 eQTL 0.000234 -0.175 0.0473 0.0 0.0 0.118

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000093134 VNN3 811869 2.74e-07 1.25e-07 3.54e-08 1.86e-07 8.83e-08 9.65e-08 1.49e-07 5.19e-08 1.44e-07 4.74e-08 1.57e-07 8.36e-08 1.45e-07 6.76e-08 6e-08 7.17e-08 3.87e-08 1.21e-07 5.21e-08 4.42e-08 1.05e-07 1.23e-07 1.34e-07 3.79e-08 1.4e-07 1.14e-07 1.11e-07 9.36e-08 1.08e-07 1.07e-07 9.7e-08 3.7e-08 3.28e-08 8.68e-08 8.76e-08 3.93e-08 5.03e-08 9.55e-08 7.52e-08 3.37e-08 3.95e-08 1.33e-07 4.33e-08 2.79e-08 5.59e-08 1.68e-08 1.23e-07 4.04e-09 5.04e-08
ENSG00000146409 SLC18B1 733295 2.8e-07 1.27e-07 3.69e-08 1.9e-07 9.01e-08 9.76e-08 1.61e-07 5.4e-08 1.45e-07 4.94e-08 1.52e-07 8.68e-08 1.53e-07 7.13e-08 6.02e-08 7.3e-08 4.09e-08 1.26e-07 5.39e-08 4.1e-08 1.08e-07 1.28e-07 1.44e-07 3.49e-08 1.55e-07 1.16e-07 1.06e-07 9.65e-08 1.12e-07 1.07e-07 1.06e-07 3.64e-08 3.35e-08 8.34e-08 7.36e-08 3.6e-08 5.04e-08 9.61e-08 6.78e-08 3.87e-08 4.36e-08 1.46e-07 5.27e-08 1.91e-08 5.19e-08 1.83e-08 1.24e-07 3.92e-09 4.79e-08
ENSG00000234484 AL032821.1 793959 2.67e-07 1.3e-07 3.54e-08 1.81e-07 8.83e-08 1e-07 1.49e-07 5.2e-08 1.44e-07 4.74e-08 1.57e-07 8.59e-08 1.45e-07 6.76e-08 5.99e-08 7.17e-08 3.93e-08 1.21e-07 5.21e-08 4.45e-08 1.05e-07 1.27e-07 1.39e-07 3.79e-08 1.46e-07 1.14e-07 1.08e-07 9.36e-08 1.08e-07 1.07e-07 9.92e-08 3.89e-08 3.3e-08 8.68e-08 8.38e-08 3.93e-08 5.05e-08 9.68e-08 7.47e-08 3.77e-08 3.89e-08 1.4e-07 4.52e-08 2.63e-08 5.75e-08 1.67e-08 1.22e-07 4.04e-09 5.04e-08