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Genes within 1Mb (chr6:133530239:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -421931 sc-eQTL 3.61e-01 0.0944 0.103 0.756 B L1
ENSG00000112303 VNN2 766780 sc-eQTL 1.71e-01 0.106 0.0771 0.756 B L1
ENSG00000112306 RPS12 715670 sc-eQTL 5.43e-01 0.0285 0.0468 0.756 B L1
ENSG00000118515 SGK1 -787873 sc-eQTL 7.47e-01 -0.0233 0.0721 0.756 B L1
ENSG00000146409 SLC18B1 716900 sc-eQTL 5.05e-01 0.0657 0.0984 0.756 B L1
ENSG00000028839 TBPL1 -421931 sc-eQTL 7.88e-01 0.0204 0.0757 0.756 CD4T L1
ENSG00000112303 VNN2 766780 sc-eQTL 9.27e-01 -0.00625 0.0681 0.756 CD4T L1
ENSG00000112306 RPS12 715670 sc-eQTL 4.55e-01 0.0346 0.0463 0.756 CD4T L1
ENSG00000118515 SGK1 -787873 sc-eQTL 4.21e-01 -0.0501 0.0622 0.756 CD4T L1
ENSG00000146409 SLC18B1 716900 sc-eQTL 1.35e-01 0.14 0.0932 0.756 CD4T L1
ENSG00000028839 TBPL1 -421931 sc-eQTL 4.16e-01 0.0621 0.0763 0.756 CD8T L1
ENSG00000112303 VNN2 766780 sc-eQTL 2.59e-01 0.105 0.0928 0.756 CD8T L1
ENSG00000112306 RPS12 715670 sc-eQTL 7.07e-01 0.012 0.0318 0.756 CD8T L1
ENSG00000118515 SGK1 -787873 sc-eQTL 7.51e-01 -0.0156 0.049 0.756 CD8T L1
ENSG00000146409 SLC18B1 716900 sc-eQTL 2.18e-01 0.118 0.0958 0.756 CD8T L1
ENSG00000028839 TBPL1 -421931 sc-eQTL 9.19e-01 -0.0118 0.116 0.766 DC L1
ENSG00000093134 VNN3 795474 sc-eQTL 7.63e-01 -0.0269 0.0891 0.766 DC L1
ENSG00000112299 VNN1 816184 sc-eQTL 3.65e-02 0.2 0.0952 0.766 DC L1
ENSG00000112303 VNN2 766780 sc-eQTL 3.29e-01 0.1 0.103 0.766 DC L1
ENSG00000112306 RPS12 715670 sc-eQTL 6.13e-01 0.0293 0.0577 0.766 DC L1
ENSG00000118515 SGK1 -787873 sc-eQTL 6.06e-01 0.0346 0.0669 0.766 DC L1
ENSG00000146409 SLC18B1 716900 sc-eQTL 7.74e-01 -0.0263 0.0913 0.766 DC L1
ENSG00000286438 AL591115.1 427111 sc-eQTL 4.09e-01 0.0687 0.083 0.766 DC L1
ENSG00000286887 AL355881.1 -766062 sc-eQTL 5.86e-01 -0.0565 0.104 0.766 DC L1
ENSG00000028839 TBPL1 -421931 sc-eQTL 5.44e-01 0.0486 0.08 0.756 Mono L1
ENSG00000093134 VNN3 795474 sc-eQTL 6.78e-01 0.0382 0.092 0.756 Mono L1
ENSG00000112299 VNN1 816184 sc-eQTL 7.56e-01 -0.0308 0.099 0.756 Mono L1
ENSG00000112303 VNN2 766780 sc-eQTL 5.20e-02 0.135 0.0692 0.756 Mono L1
ENSG00000112306 RPS12 715670 sc-eQTL 4.80e-01 -0.0296 0.0418 0.756 Mono L1
ENSG00000118515 SGK1 -787873 sc-eQTL 2.13e-01 -0.0736 0.0589 0.756 Mono L1
ENSG00000146409 SLC18B1 716900 sc-eQTL 4.13e-02 0.168 0.082 0.756 Mono L1
ENSG00000286887 AL355881.1 -766062 sc-eQTL 2.30e-02 -0.184 0.0804 0.756 Mono L1
ENSG00000028839 TBPL1 -421931 sc-eQTL 9.10e-01 0.00999 0.0886 0.758 NK L1
ENSG00000112303 VNN2 766780 sc-eQTL 5.65e-01 -0.0587 0.102 0.758 NK L1
ENSG00000112306 RPS12 715670 sc-eQTL 9.58e-01 -0.00225 0.0422 0.758 NK L1
ENSG00000118515 SGK1 -787873 sc-eQTL 1.07e-02 -0.198 0.0768 0.758 NK L1
ENSG00000028839 TBPL1 -421931 sc-eQTL 1.59e-01 -0.144 0.102 0.756 Other_T L1
ENSG00000112303 VNN2 766780 sc-eQTL 6.80e-01 -0.0401 0.0971 0.756 Other_T L1
ENSG00000112306 RPS12 715670 sc-eQTL 2.86e-01 -0.0411 0.0384 0.756 Other_T L1
ENSG00000118515 SGK1 -787873 sc-eQTL 4.52e-02 -0.142 0.0702 0.756 Other_T L1
ENSG00000146409 SLC18B1 716900 sc-eQTL 4.06e-01 0.0877 0.105 0.756 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -421931 sc-eQTL 7.31e-01 -0.0424 0.123 0.755 B_Activated L2
ENSG00000112303 VNN2 766780 sc-eQTL 8.00e-01 0.0283 0.112 0.755 B_Activated L2
ENSG00000112306 RPS12 715670 sc-eQTL 1.56e-01 0.085 0.0597 0.755 B_Activated L2
ENSG00000118515 SGK1 -787873 sc-eQTL 6.41e-01 -0.0499 0.107 0.755 B_Activated L2
ENSG00000146409 SLC18B1 716900 sc-eQTL 7.57e-01 0.0325 0.105 0.755 B_Activated L2
ENSG00000028839 TBPL1 -421931 sc-eQTL 6.62e-01 0.0492 0.112 0.755 B_Intermediate L2
ENSG00000112303 VNN2 766780 sc-eQTL 2.73e-01 0.107 0.0971 0.755 B_Intermediate L2
ENSG00000112306 RPS12 715670 sc-eQTL 9.72e-01 -0.00212 0.0596 0.755 B_Intermediate L2
ENSG00000118515 SGK1 -787873 sc-eQTL 1.70e-01 -0.141 0.103 0.755 B_Intermediate L2
ENSG00000146409 SLC18B1 716900 sc-eQTL 6.91e-01 0.0427 0.107 0.755 B_Intermediate L2
ENSG00000028839 TBPL1 -421931 sc-eQTL 3.86e-01 -0.093 0.107 0.756 B_Memory L2
ENSG00000112303 VNN2 766780 sc-eQTL 8.83e-03 0.264 0.0999 0.756 B_Memory L2
ENSG00000112306 RPS12 715670 sc-eQTL 5.12e-01 0.0322 0.0489 0.756 B_Memory L2
ENSG00000118515 SGK1 -787873 sc-eQTL 9.86e-01 0.00153 0.0898 0.756 B_Memory L2
ENSG00000146409 SLC18B1 716900 sc-eQTL 5.02e-01 -0.0686 0.102 0.756 B_Memory L2
ENSG00000028839 TBPL1 -421931 sc-eQTL 1.17e-01 0.165 0.105 0.756 B_Naive1 L2
ENSG00000112303 VNN2 766780 sc-eQTL 1.35e-01 -0.147 0.0977 0.756 B_Naive1 L2
ENSG00000112306 RPS12 715670 sc-eQTL 5.37e-01 0.0346 0.0559 0.756 B_Naive1 L2
ENSG00000118515 SGK1 -787873 sc-eQTL 8.17e-01 0.0202 0.0875 0.756 B_Naive1 L2
ENSG00000146409 SLC18B1 716900 sc-eQTL 6.66e-01 0.0466 0.108 0.756 B_Naive1 L2
ENSG00000028839 TBPL1 -421931 sc-eQTL 4.16e-02 0.228 0.111 0.758 B_Naive2 L2
ENSG00000112303 VNN2 766780 sc-eQTL 1.83e-01 0.146 0.109 0.758 B_Naive2 L2
ENSG00000112306 RPS12 715670 sc-eQTL 4.26e-01 0.0462 0.0579 0.758 B_Naive2 L2
ENSG00000118515 SGK1 -787873 sc-eQTL 5.59e-01 0.0599 0.102 0.758 B_Naive2 L2
ENSG00000146409 SLC18B1 716900 sc-eQTL 9.10e-02 0.187 0.11 0.758 B_Naive2 L2
ENSG00000028839 TBPL1 -421931 sc-eQTL 7.79e-01 -0.0309 0.11 0.761 CD4_CTL L2
ENSG00000112303 VNN2 766780 sc-eQTL 1.34e-01 0.164 0.109 0.761 CD4_CTL L2
ENSG00000112306 RPS12 715670 sc-eQTL 9.26e-01 -0.00474 0.0508 0.761 CD4_CTL L2
ENSG00000118515 SGK1 -787873 sc-eQTL 8.28e-01 0.0192 0.088 0.761 CD4_CTL L2
ENSG00000146409 SLC18B1 716900 sc-eQTL 9.65e-01 0.00445 0.102 0.761 CD4_CTL L2
ENSG00000028839 TBPL1 -421931 sc-eQTL 6.57e-01 0.0384 0.0863 0.756 CD4_Naive L2
ENSG00000112303 VNN2 766780 sc-eQTL 9.79e-01 0.00204 0.0784 0.756 CD4_Naive L2
ENSG00000112306 RPS12 715670 sc-eQTL 6.69e-01 0.0217 0.0509 0.756 CD4_Naive L2
ENSG00000118515 SGK1 -787873 sc-eQTL 5.33e-01 -0.0388 0.0622 0.756 CD4_Naive L2
ENSG00000146409 SLC18B1 716900 sc-eQTL 2.04e-01 0.124 0.0975 0.756 CD4_Naive L2
ENSG00000028839 TBPL1 -421931 sc-eQTL 9.86e-01 0.00169 0.0934 0.756 CD4_TCM L2
ENSG00000112303 VNN2 766780 sc-eQTL 4.91e-01 -0.0639 0.0926 0.756 CD4_TCM L2
ENSG00000112306 RPS12 715670 sc-eQTL 9.15e-01 -0.00516 0.0481 0.756 CD4_TCM L2
ENSG00000118515 SGK1 -787873 sc-eQTL 7.99e-01 -0.0172 0.0672 0.756 CD4_TCM L2
ENSG00000146409 SLC18B1 716900 sc-eQTL 7.82e-02 0.196 0.11 0.756 CD4_TCM L2
ENSG00000028839 TBPL1 -421931 sc-eQTL 7.41e-01 0.0357 0.108 0.756 CD4_TEM L2
ENSG00000112303 VNN2 766780 sc-eQTL 7.49e-01 0.0332 0.104 0.756 CD4_TEM L2
ENSG00000112306 RPS12 715670 sc-eQTL 9.23e-01 -0.00412 0.0425 0.756 CD4_TEM L2
ENSG00000118515 SGK1 -787873 sc-eQTL 1.77e-01 -0.0985 0.0727 0.756 CD4_TEM L2
ENSG00000146409 SLC18B1 716900 sc-eQTL 6.82e-01 0.0434 0.106 0.756 CD4_TEM L2
ENSG00000028839 TBPL1 -421931 sc-eQTL 1.93e-01 0.127 0.0974 0.756 CD8_CTL L2
ENSG00000112303 VNN2 766780 sc-eQTL 1.07e-01 0.167 0.103 0.756 CD8_CTL L2
ENSG00000112306 RPS12 715670 sc-eQTL 7.11e-01 -0.0206 0.0556 0.756 CD8_CTL L2
ENSG00000118515 SGK1 -787873 sc-eQTL 4.00e-01 -0.0791 0.0937 0.756 CD8_CTL L2
ENSG00000146409 SLC18B1 716900 sc-eQTL 2.05e-01 0.136 0.107 0.756 CD8_CTL L2
ENSG00000028839 TBPL1 -421931 sc-eQTL 2.69e-01 -0.111 0.1 0.756 CD8_Naive L2
ENSG00000112303 VNN2 766780 sc-eQTL 5.93e-01 -0.0495 0.0923 0.756 CD8_Naive L2
ENSG00000112306 RPS12 715670 sc-eQTL 4.04e-01 0.0441 0.0528 0.756 CD8_Naive L2
ENSG00000118515 SGK1 -787873 sc-eQTL 1.39e-01 -0.0982 0.066 0.756 CD8_Naive L2
ENSG00000146409 SLC18B1 716900 sc-eQTL 1.14e-01 0.168 0.105 0.756 CD8_Naive L2
ENSG00000028839 TBPL1 -421931 sc-eQTL 9.73e-01 0.00401 0.118 0.766 CD8_TCM L2
ENSG00000112303 VNN2 766780 sc-eQTL 9.94e-01 0.000864 0.109 0.766 CD8_TCM L2
ENSG00000112306 RPS12 715670 sc-eQTL 7.92e-01 -0.014 0.053 0.766 CD8_TCM L2
ENSG00000118515 SGK1 -787873 sc-eQTL 7.21e-01 -0.0313 0.0877 0.766 CD8_TCM L2
ENSG00000146409 SLC18B1 716900 sc-eQTL 1.91e-01 0.152 0.116 0.766 CD8_TCM L2
ENSG00000028839 TBPL1 -421931 sc-eQTL 8.39e-01 0.0208 0.102 0.747 CD8_TEM L2
ENSG00000112303 VNN2 766780 sc-eQTL 3.49e-01 0.104 0.111 0.747 CD8_TEM L2
ENSG00000112306 RPS12 715670 sc-eQTL 8.73e-01 0.00955 0.0597 0.747 CD8_TEM L2
ENSG00000118515 SGK1 -787873 sc-eQTL 1.32e-01 0.147 0.0972 0.747 CD8_TEM L2
ENSG00000146409 SLC18B1 716900 sc-eQTL 5.68e-01 0.0644 0.113 0.747 CD8_TEM L2
ENSG00000028839 TBPL1 -421931 sc-eQTL 1.52e-03 -0.34 0.106 0.755 MAIT L2
ENSG00000112303 VNN2 766780 sc-eQTL 6.24e-01 0.0515 0.105 0.755 MAIT L2
ENSG00000112306 RPS12 715670 sc-eQTL 2.85e-01 -0.0551 0.0514 0.755 MAIT L2
ENSG00000118515 SGK1 -787873 sc-eQTL 4.59e-02 -0.144 0.0719 0.755 MAIT L2
ENSG00000146409 SLC18B1 716900 sc-eQTL 6.13e-01 0.0547 0.108 0.755 MAIT L2
ENSG00000028839 TBPL1 -421931 sc-eQTL 7.19e-01 -0.0422 0.117 0.76 NK_CD56bright L2
ENSG00000112303 VNN2 766780 sc-eQTL 8.90e-01 -0.0152 0.11 0.76 NK_CD56bright L2
ENSG00000112306 RPS12 715670 sc-eQTL 1.61e-01 0.086 0.0611 0.76 NK_CD56bright L2
ENSG00000118515 SGK1 -787873 sc-eQTL 7.61e-02 -0.162 0.0911 0.76 NK_CD56bright L2
ENSG00000028839 TBPL1 -421931 sc-eQTL 6.35e-01 -0.0454 0.0955 0.761 NK_CD56dim L2
ENSG00000112303 VNN2 766780 sc-eQTL 1.28e-01 -0.167 0.109 0.761 NK_CD56dim L2
ENSG00000112306 RPS12 715670 sc-eQTL 9.83e-01 0.000907 0.0434 0.761 NK_CD56dim L2
ENSG00000118515 SGK1 -787873 sc-eQTL 5.63e-01 -0.0557 0.0962 0.761 NK_CD56dim L2
ENSG00000028839 TBPL1 -421931 sc-eQTL 6.15e-01 -0.0605 0.12 0.758 NK_HLA L2
ENSG00000112303 VNN2 766780 sc-eQTL 6.78e-01 0.0461 0.111 0.758 NK_HLA L2
ENSG00000112306 RPS12 715670 sc-eQTL 9.98e-01 -0.000113 0.0516 0.758 NK_HLA L2
ENSG00000118515 SGK1 -787873 sc-eQTL 5.70e-01 0.058 0.102 0.758 NK_HLA L2
ENSG00000028839 TBPL1 -421931 sc-eQTL 8.87e-01 -0.014 0.0988 0.761 NK_cytokine L2
ENSG00000112303 VNN2 766780 sc-eQTL 9.60e-01 0.00543 0.108 0.761 NK_cytokine L2
ENSG00000112306 RPS12 715670 sc-eQTL 7.85e-01 0.0159 0.0583 0.761 NK_cytokine L2
ENSG00000118515 SGK1 -787873 sc-eQTL 2.50e-02 -0.217 0.0959 0.761 NK_cytokine L2
ENSG00000028839 TBPL1 -421931 sc-eQTL 2.32e-01 -0.158 0.131 0.748 PB L2
ENSG00000112303 VNN2 766780 sc-eQTL 3.49e-01 0.108 0.114 0.748 PB L2
ENSG00000112306 RPS12 715670 sc-eQTL 4.15e-01 -0.0532 0.065 0.748 PB L2
ENSG00000118515 SGK1 -787873 sc-eQTL 3.31e-01 -0.102 0.105 0.748 PB L2
ENSG00000146409 SLC18B1 716900 sc-eQTL 8.87e-01 0.0174 0.122 0.748 PB L2
ENSG00000028839 TBPL1 -421931 sc-eQTL 5.92e-01 0.0585 0.109 0.757 Pro_T L2
ENSG00000112303 VNN2 766780 sc-eQTL 6.44e-01 0.0482 0.104 0.757 Pro_T L2
ENSG00000112306 RPS12 715670 sc-eQTL 7.68e-01 -0.0117 0.0395 0.757 Pro_T L2
ENSG00000118515 SGK1 -787873 sc-eQTL 9.36e-01 0.00632 0.0791 0.757 Pro_T L2
ENSG00000146409 SLC18B1 716900 sc-eQTL 6.13e-01 0.0517 0.102 0.757 Pro_T L2
ENSG00000028839 TBPL1 -421931 sc-eQTL 7.61e-01 0.0337 0.111 0.756 Treg L2
ENSG00000112303 VNN2 766780 sc-eQTL 1.17e-01 0.137 0.0872 0.756 Treg L2
ENSG00000112306 RPS12 715670 sc-eQTL 6.70e-01 0.0165 0.0388 0.756 Treg L2
ENSG00000118515 SGK1 -787873 sc-eQTL 2.89e-01 -0.0866 0.0815 0.756 Treg L2
ENSG00000146409 SLC18B1 716900 sc-eQTL 3.69e-01 -0.0985 0.109 0.756 Treg L2
ENSG00000028839 TBPL1 -421931 sc-eQTL 9.93e-01 0.0011 0.117 0.766 cDC L2
ENSG00000093134 VNN3 795474 sc-eQTL 6.87e-01 0.0367 0.091 0.766 cDC L2
ENSG00000112299 VNN1 816184 sc-eQTL 7.27e-02 0.192 0.106 0.766 cDC L2
ENSG00000112303 VNN2 766780 sc-eQTL 1.59e-01 0.147 0.104 0.766 cDC L2
ENSG00000112306 RPS12 715670 sc-eQTL 4.14e-01 0.0421 0.0514 0.766 cDC L2
ENSG00000118515 SGK1 -787873 sc-eQTL 9.94e-01 0.000626 0.0867 0.766 cDC L2
ENSG00000146409 SLC18B1 716900 sc-eQTL 3.53e-01 0.0948 0.102 0.766 cDC L2
ENSG00000286438 AL591115.1 427111 sc-eQTL 8.65e-01 0.0139 0.0815 0.766 cDC L2
ENSG00000286887 AL355881.1 -766062 sc-eQTL 7.74e-01 -0.0288 0.1 0.766 cDC L2
ENSG00000028839 TBPL1 -421931 sc-eQTL 2.21e-01 0.113 0.0919 0.756 cMono_IL1B L2
ENSG00000093134 VNN3 795474 sc-eQTL 9.17e-01 0.0103 0.0989 0.756 cMono_IL1B L2
ENSG00000112299 VNN1 816184 sc-eQTL 8.17e-01 -0.0231 0.0998 0.756 cMono_IL1B L2
ENSG00000112303 VNN2 766780 sc-eQTL 1.08e-01 0.128 0.0793 0.756 cMono_IL1B L2
ENSG00000112306 RPS12 715670 sc-eQTL 6.67e-01 -0.0191 0.0443 0.756 cMono_IL1B L2
ENSG00000118515 SGK1 -787873 sc-eQTL 5.55e-01 -0.0391 0.0661 0.756 cMono_IL1B L2
ENSG00000146409 SLC18B1 716900 sc-eQTL 9.33e-02 0.143 0.0849 0.756 cMono_IL1B L2
ENSG00000286887 AL355881.1 -766062 sc-eQTL 8.06e-02 -0.155 0.0884 0.756 cMono_IL1B L2
ENSG00000028839 TBPL1 -421931 sc-eQTL 5.47e-01 -0.0631 0.105 0.756 cMono_S100A L2
ENSG00000093134 VNN3 795474 sc-eQTL 1.71e-01 0.129 0.094 0.756 cMono_S100A L2
ENSG00000112299 VNN1 816184 sc-eQTL 5.17e-01 0.0664 0.102 0.756 cMono_S100A L2
ENSG00000112303 VNN2 766780 sc-eQTL 6.62e-03 0.181 0.0659 0.756 cMono_S100A L2
ENSG00000112306 RPS12 715670 sc-eQTL 2.23e-01 -0.0588 0.0482 0.756 cMono_S100A L2
ENSG00000118515 SGK1 -787873 sc-eQTL 1.71e-01 -0.0756 0.055 0.756 cMono_S100A L2
ENSG00000146409 SLC18B1 716900 sc-eQTL 1.07e-01 0.144 0.0889 0.756 cMono_S100A L2
ENSG00000286887 AL355881.1 -766062 sc-eQTL 5.98e-01 -0.0462 0.0874 0.756 cMono_S100A L2
ENSG00000028839 TBPL1 -421931 sc-eQTL 4.58e-01 0.104 0.14 0.748 gdT L2
ENSG00000112303 VNN2 766780 sc-eQTL 1.80e-02 -0.314 0.131 0.748 gdT L2
ENSG00000112306 RPS12 715670 sc-eQTL 6.67e-01 -0.022 0.0509 0.748 gdT L2
ENSG00000118515 SGK1 -787873 sc-eQTL 1.02e-01 -0.157 0.0953 0.748 gdT L2
ENSG00000146409 SLC18B1 716900 sc-eQTL 6.25e-01 0.0645 0.132 0.748 gdT L2
ENSG00000028839 TBPL1 -421931 sc-eQTL 6.18e-01 0.0534 0.107 0.764 intMono L2
ENSG00000093134 VNN3 795474 sc-eQTL 5.24e-01 0.0658 0.103 0.764 intMono L2
ENSG00000112299 VNN1 816184 sc-eQTL 9.96e-01 0.000513 0.102 0.764 intMono L2
ENSG00000112303 VNN2 766780 sc-eQTL 1.60e-01 0.145 0.103 0.764 intMono L2
ENSG00000112306 RPS12 715670 sc-eQTL 7.36e-01 -0.0153 0.0451 0.764 intMono L2
ENSG00000118515 SGK1 -787873 sc-eQTL 2.16e-01 -0.0937 0.0755 0.764 intMono L2
ENSG00000146409 SLC18B1 716900 sc-eQTL 9.43e-01 0.00785 0.11 0.764 intMono L2
ENSG00000286887 AL355881.1 -766062 sc-eQTL 3.12e-01 -0.106 0.105 0.764 intMono L2
ENSG00000028839 TBPL1 -421931 sc-eQTL 7.83e-01 -0.0308 0.112 0.749 ncMono L2
ENSG00000093134 VNN3 795474 sc-eQTL 2.91e-01 0.113 0.106 0.749 ncMono L2
ENSG00000112299 VNN1 816184 sc-eQTL 9.23e-01 0.0102 0.106 0.749 ncMono L2
ENSG00000112303 VNN2 766780 sc-eQTL 4.29e-01 0.0805 0.102 0.749 ncMono L2
ENSG00000112306 RPS12 715670 sc-eQTL 8.68e-01 -0.00849 0.0511 0.749 ncMono L2
ENSG00000118515 SGK1 -787873 sc-eQTL 4.03e-01 -0.0605 0.0721 0.749 ncMono L2
ENSG00000146409 SLC18B1 716900 sc-eQTL 9.81e-01 0.00218 0.0902 0.749 ncMono L2
ENSG00000286887 AL355881.1 -766062 sc-eQTL 9.30e-02 -0.16 0.0947 0.749 ncMono L2
ENSG00000028839 TBPL1 -421931 sc-eQTL 7.06e-01 -0.048 0.127 0.766 pDC L2
ENSG00000093134 VNN3 795474 sc-eQTL 8.27e-01 -0.0187 0.0853 0.766 pDC L2
ENSG00000112299 VNN1 816184 sc-eQTL 2.21e-04 0.314 0.083 0.766 pDC L2
ENSG00000112303 VNN2 766780 sc-eQTL 4.38e-01 0.0802 0.103 0.766 pDC L2
ENSG00000112306 RPS12 715670 sc-eQTL 3.54e-01 0.0659 0.071 0.766 pDC L2
ENSG00000118515 SGK1 -787873 sc-eQTL 7.90e-01 -0.0193 0.0723 0.766 pDC L2
ENSG00000146409 SLC18B1 716900 sc-eQTL 1.26e-02 -0.261 0.103 0.766 pDC L2
ENSG00000286438 AL591115.1 427111 sc-eQTL 4.63e-01 0.0741 0.101 0.766 pDC L2
ENSG00000286887 AL355881.1 -766062 sc-eQTL 9.28e-01 0.00807 0.0894 0.766 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -421931 sc-eQTL 9.39e-01 0.00825 0.108 0.756 B_Memory LOneK1K
ENSG00000112303 VNN2 766780 sc-eQTL 4.83e-02 0.184 0.0929 0.756 B_Memory LOneK1K
ENSG00000112306 RPS12 715670 sc-eQTL 8.19e-01 0.0123 0.0534 0.756 B_Memory LOneK1K
ENSG00000118515 SGK1 -787873 sc-eQTL 2.35e-01 -0.099 0.0832 0.756 B_Memory LOneK1K
ENSG00000146409 SLC18B1 716900 sc-eQTL 7.88e-01 0.0264 0.098 0.756 B_Memory LOneK1K
ENSG00000028839 TBPL1 -421931 sc-eQTL 2.52e-02 0.236 0.105 0.756 B_Naive LOneK1K
ENSG00000112303 VNN2 766780 sc-eQTL 9.72e-01 0.00324 0.0925 0.756 B_Naive LOneK1K
ENSG00000112306 RPS12 715670 sc-eQTL 4.25e-01 0.0447 0.0559 0.756 B_Naive LOneK1K
ENSG00000118515 SGK1 -787873 sc-eQTL 8.31e-01 0.0185 0.0867 0.756 B_Naive LOneK1K
ENSG00000146409 SLC18B1 716900 sc-eQTL 4.39e-01 0.0817 0.105 0.756 B_Naive LOneK1K
ENSG00000028839 TBPL1 -421931 sc-eQTL 6.51e-01 0.038 0.084 0.756 CD14_Mono LOneK1K
ENSG00000093134 VNN3 795474 sc-eQTL 8.35e-01 0.0198 0.0952 0.756 CD14_Mono LOneK1K
ENSG00000112299 VNN1 816184 sc-eQTL 9.79e-01 -0.00264 0.0994 0.756 CD14_Mono LOneK1K
ENSG00000112303 VNN2 766780 sc-eQTL 7.01e-02 0.119 0.0652 0.756 CD14_Mono LOneK1K
ENSG00000112306 RPS12 715670 sc-eQTL 4.60e-01 -0.0333 0.045 0.756 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -787873 sc-eQTL 3.93e-01 -0.0524 0.0613 0.756 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 716900 sc-eQTL 4.17e-02 0.163 0.0794 0.756 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -766062 sc-eQTL 1.29e-01 -0.127 0.0836 0.756 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -421931 sc-eQTL 8.97e-01 0.014 0.108 0.759 CD16_Mono LOneK1K
ENSG00000093134 VNN3 795474 sc-eQTL 2.43e-01 0.122 0.104 0.759 CD16_Mono LOneK1K
ENSG00000112299 VNN1 816184 sc-eQTL 7.75e-01 0.0297 0.104 0.759 CD16_Mono LOneK1K
ENSG00000112303 VNN2 766780 sc-eQTL 2.21e-01 0.119 0.0973 0.759 CD16_Mono LOneK1K
ENSG00000112306 RPS12 715670 sc-eQTL 8.37e-01 -0.00856 0.0414 0.759 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -787873 sc-eQTL 2.16e-01 -0.0775 0.0625 0.759 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 716900 sc-eQTL 6.29e-01 -0.0486 0.101 0.759 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -766062 sc-eQTL 1.24e-02 -0.226 0.0896 0.759 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -421931 sc-eQTL 5.40e-01 -0.054 0.088 0.761 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 766780 sc-eQTL 5.47e-01 -0.0631 0.105 0.761 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 715670 sc-eQTL 9.98e-01 -0.000111 0.0427 0.761 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -787873 sc-eQTL 6.10e-02 -0.165 0.0875 0.761 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000112303 VNN2 766780 pQTL 0.0361 0.0593 0.0283 0.0 0.0 0.27
ENSG00000112303 VNN2 766780 eQTL 0.0156 0.0354 0.0146 0.0 0.0 0.277

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina