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Genes within 1Mb (chr6:133528651:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -423519 sc-eQTL 3.42e-01 0.098 0.103 0.759 B L1
ENSG00000112303 VNN2 765192 sc-eQTL 1.82e-01 0.103 0.0769 0.759 B L1
ENSG00000112306 RPS12 714082 sc-eQTL 4.20e-01 0.0376 0.0466 0.759 B L1
ENSG00000118515 SGK1 -789461 sc-eQTL 6.70e-01 -0.0307 0.0719 0.759 B L1
ENSG00000146409 SLC18B1 715312 sc-eQTL 3.89e-01 0.0846 0.0981 0.759 B L1
ENSG00000028839 TBPL1 -423519 sc-eQTL 8.50e-01 0.0143 0.0755 0.759 CD4T L1
ENSG00000112303 VNN2 765192 sc-eQTL 8.32e-01 -0.0144 0.068 0.759 CD4T L1
ENSG00000112306 RPS12 714082 sc-eQTL 4.24e-01 0.037 0.0462 0.759 CD4T L1
ENSG00000118515 SGK1 -789461 sc-eQTL 3.91e-01 -0.0533 0.062 0.759 CD4T L1
ENSG00000146409 SLC18B1 715312 sc-eQTL 1.05e-01 0.151 0.093 0.759 CD4T L1
ENSG00000028839 TBPL1 -423519 sc-eQTL 3.36e-01 0.0736 0.0762 0.759 CD8T L1
ENSG00000112303 VNN2 765192 sc-eQTL 2.35e-01 0.111 0.0928 0.759 CD8T L1
ENSG00000112306 RPS12 714082 sc-eQTL 7.08e-01 0.0119 0.0318 0.759 CD8T L1
ENSG00000118515 SGK1 -789461 sc-eQTL 7.66e-01 -0.0146 0.049 0.759 CD8T L1
ENSG00000146409 SLC18B1 715312 sc-eQTL 1.70e-01 0.132 0.0958 0.759 CD8T L1
ENSG00000028839 TBPL1 -423519 sc-eQTL 9.47e-01 0.00768 0.115 0.768 DC L1
ENSG00000093134 VNN3 793886 sc-eQTL 6.86e-01 -0.036 0.0889 0.768 DC L1
ENSG00000112299 VNN1 814596 sc-eQTL 4.19e-02 0.195 0.0951 0.768 DC L1
ENSG00000112303 VNN2 765192 sc-eQTL 3.44e-01 0.0972 0.103 0.768 DC L1
ENSG00000112306 RPS12 714082 sc-eQTL 6.35e-01 0.0274 0.0576 0.768 DC L1
ENSG00000118515 SGK1 -789461 sc-eQTL 6.77e-01 0.0278 0.0668 0.768 DC L1
ENSG00000146409 SLC18B1 715312 sc-eQTL 7.26e-01 -0.032 0.0912 0.768 DC L1
ENSG00000286438 AL591115.1 425523 sc-eQTL 3.95e-01 0.0707 0.0828 0.768 DC L1
ENSG00000286887 AL355881.1 -767650 sc-eQTL 6.94e-01 -0.0407 0.103 0.768 DC L1
ENSG00000028839 TBPL1 -423519 sc-eQTL 5.84e-01 0.0438 0.08 0.759 Mono L1
ENSG00000093134 VNN3 793886 sc-eQTL 7.16e-01 0.0335 0.092 0.759 Mono L1
ENSG00000112299 VNN1 814596 sc-eQTL 8.60e-01 -0.0175 0.099 0.759 Mono L1
ENSG00000112303 VNN2 765192 sc-eQTL 5.13e-02 0.136 0.0692 0.759 Mono L1
ENSG00000112306 RPS12 714082 sc-eQTL 6.25e-01 -0.0205 0.0418 0.759 Mono L1
ENSG00000118515 SGK1 -789461 sc-eQTL 2.60e-01 -0.0665 0.0589 0.759 Mono L1
ENSG00000146409 SLC18B1 715312 sc-eQTL 4.74e-02 0.164 0.082 0.759 Mono L1
ENSG00000286887 AL355881.1 -767650 sc-eQTL 2.60e-02 -0.18 0.0804 0.759 Mono L1
ENSG00000028839 TBPL1 -423519 sc-eQTL 7.66e-01 0.0263 0.0884 0.76 NK L1
ENSG00000112303 VNN2 765192 sc-eQTL 6.76e-01 -0.0426 0.102 0.76 NK L1
ENSG00000112306 RPS12 714082 sc-eQTL 9.94e-01 0.000315 0.0421 0.76 NK L1
ENSG00000118515 SGK1 -789461 sc-eQTL 6.90e-03 -0.209 0.0766 0.76 NK L1
ENSG00000028839 TBPL1 -423519 sc-eQTL 2.14e-01 -0.127 0.102 0.759 Other_T L1
ENSG00000112303 VNN2 765192 sc-eQTL 7.64e-01 -0.0291 0.097 0.759 Other_T L1
ENSG00000112306 RPS12 714082 sc-eQTL 2.94e-01 -0.0404 0.0384 0.759 Other_T L1
ENSG00000118515 SGK1 -789461 sc-eQTL 4.14e-02 -0.144 0.0701 0.759 Other_T L1
ENSG00000146409 SLC18B1 715312 sc-eQTL 3.74e-01 0.0937 0.105 0.759 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -423519 sc-eQTL 7.81e-01 -0.0339 0.122 0.758 B_Activated L2
ENSG00000112303 VNN2 765192 sc-eQTL 6.71e-01 0.0472 0.111 0.758 B_Activated L2
ENSG00000112306 RPS12 714082 sc-eQTL 2.71e-01 0.0655 0.0593 0.758 B_Activated L2
ENSG00000118515 SGK1 -789461 sc-eQTL 5.69e-01 -0.0606 0.106 0.758 B_Activated L2
ENSG00000146409 SLC18B1 715312 sc-eQTL 6.14e-01 0.0527 0.104 0.758 B_Activated L2
ENSG00000028839 TBPL1 -423519 sc-eQTL 7.19e-01 0.0405 0.112 0.758 B_Intermediate L2
ENSG00000112303 VNN2 765192 sc-eQTL 2.37e-01 0.115 0.0968 0.758 B_Intermediate L2
ENSG00000112306 RPS12 714082 sc-eQTL 8.90e-01 0.00821 0.0595 0.758 B_Intermediate L2
ENSG00000118515 SGK1 -789461 sc-eQTL 1.98e-01 -0.132 0.102 0.758 B_Intermediate L2
ENSG00000146409 SLC18B1 715312 sc-eQTL 6.38e-01 0.0505 0.107 0.758 B_Intermediate L2
ENSG00000028839 TBPL1 -423519 sc-eQTL 4.09e-01 -0.0884 0.107 0.759 B_Memory L2
ENSG00000112303 VNN2 765192 sc-eQTL 8.33e-03 0.266 0.0997 0.759 B_Memory L2
ENSG00000112306 RPS12 714082 sc-eQTL 4.27e-01 0.0388 0.0488 0.759 B_Memory L2
ENSG00000118515 SGK1 -789461 sc-eQTL 9.16e-01 -0.00944 0.0896 0.759 B_Memory L2
ENSG00000146409 SLC18B1 715312 sc-eQTL 6.43e-01 -0.0472 0.102 0.759 B_Memory L2
ENSG00000028839 TBPL1 -423519 sc-eQTL 1.17e-01 0.164 0.104 0.759 B_Naive1 L2
ENSG00000112303 VNN2 765192 sc-eQTL 1.29e-01 -0.148 0.0975 0.759 B_Naive1 L2
ENSG00000112306 RPS12 714082 sc-eQTL 4.21e-01 0.045 0.0557 0.759 B_Naive1 L2
ENSG00000118515 SGK1 -789461 sc-eQTL 8.59e-01 0.0156 0.0873 0.759 B_Naive1 L2
ENSG00000146409 SLC18B1 715312 sc-eQTL 5.76e-01 0.0602 0.108 0.759 B_Naive1 L2
ENSG00000028839 TBPL1 -423519 sc-eQTL 3.55e-02 0.234 0.111 0.76 B_Naive2 L2
ENSG00000112303 VNN2 765192 sc-eQTL 1.79e-01 0.147 0.109 0.76 B_Naive2 L2
ENSG00000112306 RPS12 714082 sc-eQTL 3.26e-01 0.0567 0.0576 0.76 B_Naive2 L2
ENSG00000118515 SGK1 -789461 sc-eQTL 6.14e-01 0.0516 0.102 0.76 B_Naive2 L2
ENSG00000146409 SLC18B1 715312 sc-eQTL 7.06e-02 0.199 0.109 0.76 B_Naive2 L2
ENSG00000028839 TBPL1 -423519 sc-eQTL 7.31e-01 -0.0376 0.109 0.764 CD4_CTL L2
ENSG00000112303 VNN2 765192 sc-eQTL 1.26e-01 0.167 0.109 0.764 CD4_CTL L2
ENSG00000112306 RPS12 714082 sc-eQTL 9.28e-01 0.00459 0.0507 0.764 CD4_CTL L2
ENSG00000118515 SGK1 -789461 sc-eQTL 8.19e-01 0.0202 0.0878 0.764 CD4_CTL L2
ENSG00000146409 SLC18B1 715312 sc-eQTL 9.77e-01 0.00298 0.102 0.764 CD4_CTL L2
ENSG00000028839 TBPL1 -423519 sc-eQTL 7.19e-01 0.031 0.0861 0.759 CD4_Naive L2
ENSG00000112303 VNN2 765192 sc-eQTL 9.45e-01 -0.0054 0.0783 0.759 CD4_Naive L2
ENSG00000112306 RPS12 714082 sc-eQTL 6.90e-01 0.0203 0.0507 0.759 CD4_Naive L2
ENSG00000118515 SGK1 -789461 sc-eQTL 5.07e-01 -0.0413 0.0621 0.759 CD4_Naive L2
ENSG00000146409 SLC18B1 715312 sc-eQTL 1.59e-01 0.138 0.0973 0.759 CD4_Naive L2
ENSG00000028839 TBPL1 -423519 sc-eQTL 9.99e-01 9.86e-05 0.0933 0.759 CD4_TCM L2
ENSG00000112303 VNN2 765192 sc-eQTL 4.22e-01 -0.0744 0.0925 0.759 CD4_TCM L2
ENSG00000112306 RPS12 714082 sc-eQTL 9.52e-01 0.00287 0.048 0.759 CD4_TCM L2
ENSG00000118515 SGK1 -789461 sc-eQTL 8.11e-01 -0.0161 0.0672 0.759 CD4_TCM L2
ENSG00000146409 SLC18B1 715312 sc-eQTL 7.90e-02 0.195 0.11 0.759 CD4_TCM L2
ENSG00000028839 TBPL1 -423519 sc-eQTL 8.06e-01 0.0265 0.108 0.759 CD4_TEM L2
ENSG00000112303 VNN2 765192 sc-eQTL 7.34e-01 0.0353 0.104 0.759 CD4_TEM L2
ENSG00000112306 RPS12 714082 sc-eQTL 9.85e-01 0.000814 0.0425 0.759 CD4_TEM L2
ENSG00000118515 SGK1 -789461 sc-eQTL 1.96e-01 -0.0942 0.0727 0.759 CD4_TEM L2
ENSG00000146409 SLC18B1 715312 sc-eQTL 5.67e-01 0.0604 0.105 0.759 CD4_TEM L2
ENSG00000028839 TBPL1 -423519 sc-eQTL 1.58e-01 0.138 0.0972 0.759 CD8_CTL L2
ENSG00000112303 VNN2 765192 sc-eQTL 9.22e-02 0.174 0.103 0.759 CD8_CTL L2
ENSG00000112306 RPS12 714082 sc-eQTL 7.54e-01 -0.0174 0.0555 0.759 CD8_CTL L2
ENSG00000118515 SGK1 -789461 sc-eQTL 3.69e-01 -0.0842 0.0936 0.759 CD8_CTL L2
ENSG00000146409 SLC18B1 715312 sc-eQTL 1.88e-01 0.141 0.107 0.759 CD8_CTL L2
ENSG00000028839 TBPL1 -423519 sc-eQTL 3.18e-01 -0.1 0.1 0.759 CD8_Naive L2
ENSG00000112303 VNN2 765192 sc-eQTL 5.86e-01 -0.0503 0.0922 0.759 CD8_Naive L2
ENSG00000112306 RPS12 714082 sc-eQTL 3.80e-01 0.0464 0.0527 0.759 CD8_Naive L2
ENSG00000118515 SGK1 -789461 sc-eQTL 1.50e-01 -0.0953 0.066 0.759 CD8_Naive L2
ENSG00000146409 SLC18B1 715312 sc-eQTL 7.76e-02 0.187 0.105 0.759 CD8_Naive L2
ENSG00000028839 TBPL1 -423519 sc-eQTL 9.42e-01 0.0086 0.118 0.769 CD8_TCM L2
ENSG00000112303 VNN2 765192 sc-eQTL 9.78e-01 0.00302 0.108 0.769 CD8_TCM L2
ENSG00000112306 RPS12 714082 sc-eQTL 8.85e-01 -0.00763 0.0528 0.769 CD8_TCM L2
ENSG00000118515 SGK1 -789461 sc-eQTL 7.37e-01 -0.0295 0.0875 0.769 CD8_TCM L2
ENSG00000146409 SLC18B1 715312 sc-eQTL 1.68e-01 0.159 0.115 0.769 CD8_TCM L2
ENSG00000028839 TBPL1 -423519 sc-eQTL 8.13e-01 0.0242 0.102 0.749 CD8_TEM L2
ENSG00000112303 VNN2 765192 sc-eQTL 3.96e-01 0.0939 0.111 0.749 CD8_TEM L2
ENSG00000112306 RPS12 714082 sc-eQTL 8.02e-01 0.0149 0.0596 0.749 CD8_TEM L2
ENSG00000118515 SGK1 -789461 sc-eQTL 1.41e-01 0.143 0.0971 0.749 CD8_TEM L2
ENSG00000146409 SLC18B1 715312 sc-eQTL 5.47e-01 0.0679 0.113 0.749 CD8_TEM L2
ENSG00000028839 TBPL1 -423519 sc-eQTL 2.13e-03 -0.329 0.106 0.758 MAIT L2
ENSG00000112303 VNN2 765192 sc-eQTL 5.94e-01 0.0558 0.105 0.758 MAIT L2
ENSG00000112306 RPS12 714082 sc-eQTL 3.03e-01 -0.053 0.0513 0.758 MAIT L2
ENSG00000118515 SGK1 -789461 sc-eQTL 4.70e-02 -0.143 0.0718 0.758 MAIT L2
ENSG00000146409 SLC18B1 715312 sc-eQTL 6.85e-01 0.0438 0.108 0.758 MAIT L2
ENSG00000028839 TBPL1 -423519 sc-eQTL 7.81e-01 -0.0325 0.117 0.762 NK_CD56bright L2
ENSG00000112303 VNN2 765192 sc-eQTL 9.46e-01 -0.00745 0.11 0.762 NK_CD56bright L2
ENSG00000112306 RPS12 714082 sc-eQTL 1.22e-01 0.0948 0.0609 0.762 NK_CD56bright L2
ENSG00000118515 SGK1 -789461 sc-eQTL 6.29e-02 -0.17 0.0909 0.762 NK_CD56bright L2
ENSG00000028839 TBPL1 -423519 sc-eQTL 6.91e-01 -0.038 0.0954 0.763 NK_CD56dim L2
ENSG00000112303 VNN2 765192 sc-eQTL 1.77e-01 -0.147 0.109 0.763 NK_CD56dim L2
ENSG00000112306 RPS12 714082 sc-eQTL 9.06e-01 0.0051 0.0434 0.763 NK_CD56dim L2
ENSG00000118515 SGK1 -789461 sc-eQTL 4.50e-01 -0.0726 0.0959 0.763 NK_CD56dim L2
ENSG00000028839 TBPL1 -423519 sc-eQTL 7.43e-01 -0.0394 0.12 0.76 NK_HLA L2
ENSG00000112303 VNN2 765192 sc-eQTL 5.80e-01 0.0612 0.11 0.76 NK_HLA L2
ENSG00000112306 RPS12 714082 sc-eQTL 9.10e-01 0.00584 0.0515 0.76 NK_HLA L2
ENSG00000118515 SGK1 -789461 sc-eQTL 5.37e-01 0.0628 0.102 0.76 NK_HLA L2
ENSG00000028839 TBPL1 -423519 sc-eQTL 9.72e-01 -0.00341 0.0985 0.763 NK_cytokine L2
ENSG00000112303 VNN2 765192 sc-eQTL 9.31e-01 0.00931 0.107 0.763 NK_cytokine L2
ENSG00000112306 RPS12 714082 sc-eQTL 6.69e-01 0.0249 0.0582 0.763 NK_cytokine L2
ENSG00000118515 SGK1 -789461 sc-eQTL 2.04e-02 -0.223 0.0956 0.763 NK_cytokine L2
ENSG00000028839 TBPL1 -423519 sc-eQTL 2.14e-01 -0.163 0.131 0.752 PB L2
ENSG00000112303 VNN2 765192 sc-eQTL 3.78e-01 0.101 0.114 0.752 PB L2
ENSG00000112306 RPS12 714082 sc-eQTL 3.93e-01 -0.0556 0.0648 0.752 PB L2
ENSG00000118515 SGK1 -789461 sc-eQTL 3.44e-01 -0.0995 0.105 0.752 PB L2
ENSG00000146409 SLC18B1 715312 sc-eQTL 9.76e-01 0.00374 0.122 0.752 PB L2
ENSG00000028839 TBPL1 -423519 sc-eQTL 4.14e-01 0.089 0.109 0.759 Pro_T L2
ENSG00000112303 VNN2 765192 sc-eQTL 6.78e-01 0.0434 0.104 0.759 Pro_T L2
ENSG00000112306 RPS12 714082 sc-eQTL 7.84e-01 -0.0108 0.0394 0.759 Pro_T L2
ENSG00000118515 SGK1 -789461 sc-eQTL 9.41e-01 -0.00587 0.0791 0.759 Pro_T L2
ENSG00000146409 SLC18B1 715312 sc-eQTL 6.68e-01 0.0438 0.102 0.759 Pro_T L2
ENSG00000028839 TBPL1 -423519 sc-eQTL 8.07e-01 0.0269 0.11 0.759 Treg L2
ENSG00000112303 VNN2 765192 sc-eQTL 9.06e-02 0.148 0.0869 0.759 Treg L2
ENSG00000112306 RPS12 714082 sc-eQTL 6.17e-01 0.0194 0.0387 0.759 Treg L2
ENSG00000118515 SGK1 -789461 sc-eQTL 3.14e-01 -0.0821 0.0814 0.759 Treg L2
ENSG00000146409 SLC18B1 715312 sc-eQTL 3.60e-01 -0.1 0.109 0.759 Treg L2
ENSG00000028839 TBPL1 -423519 sc-eQTL 8.81e-01 0.0175 0.116 0.768 cDC L2
ENSG00000093134 VNN3 793886 sc-eQTL 7.58e-01 0.028 0.0908 0.768 cDC L2
ENSG00000112299 VNN1 814596 sc-eQTL 7.54e-02 0.189 0.106 0.768 cDC L2
ENSG00000112303 VNN2 765192 sc-eQTL 2.28e-01 0.125 0.104 0.768 cDC L2
ENSG00000112306 RPS12 714082 sc-eQTL 3.89e-01 0.0443 0.0513 0.768 cDC L2
ENSG00000118515 SGK1 -789461 sc-eQTL 9.42e-01 -0.00635 0.0866 0.768 cDC L2
ENSG00000146409 SLC18B1 715312 sc-eQTL 3.65e-01 0.0922 0.102 0.768 cDC L2
ENSG00000286438 AL591115.1 425523 sc-eQTL 7.66e-01 0.0242 0.0813 0.768 cDC L2
ENSG00000286887 AL355881.1 -767650 sc-eQTL 8.61e-01 -0.0176 0.1 0.768 cDC L2
ENSG00000028839 TBPL1 -423519 sc-eQTL 2.62e-01 0.103 0.0919 0.759 cMono_IL1B L2
ENSG00000093134 VNN3 793886 sc-eQTL 9.48e-01 0.0065 0.0989 0.759 cMono_IL1B L2
ENSG00000112299 VNN1 814596 sc-eQTL 9.41e-01 -0.00738 0.0997 0.759 cMono_IL1B L2
ENSG00000112303 VNN2 765192 sc-eQTL 1.14e-01 0.126 0.0793 0.759 cMono_IL1B L2
ENSG00000112306 RPS12 714082 sc-eQTL 8.57e-01 -0.00797 0.0443 0.759 cMono_IL1B L2
ENSG00000118515 SGK1 -789461 sc-eQTL 6.27e-01 -0.0321 0.066 0.759 cMono_IL1B L2
ENSG00000146409 SLC18B1 715312 sc-eQTL 9.34e-02 0.143 0.0849 0.759 cMono_IL1B L2
ENSG00000286887 AL355881.1 -767650 sc-eQTL 9.85e-02 -0.147 0.0884 0.759 cMono_IL1B L2
ENSG00000028839 TBPL1 -423519 sc-eQTL 5.03e-01 -0.0701 0.104 0.759 cMono_S100A L2
ENSG00000093134 VNN3 793886 sc-eQTL 1.70e-01 0.129 0.0939 0.759 cMono_S100A L2
ENSG00000112299 VNN1 814596 sc-eQTL 4.22e-01 0.0823 0.102 0.759 cMono_S100A L2
ENSG00000112303 VNN2 765192 sc-eQTL 5.66e-03 0.184 0.0659 0.759 cMono_S100A L2
ENSG00000112306 RPS12 714082 sc-eQTL 3.24e-01 -0.0476 0.0482 0.759 cMono_S100A L2
ENSG00000118515 SGK1 -789461 sc-eQTL 2.19e-01 -0.0678 0.055 0.759 cMono_S100A L2
ENSG00000146409 SLC18B1 715312 sc-eQTL 1.47e-01 0.129 0.0889 0.759 cMono_S100A L2
ENSG00000286887 AL355881.1 -767650 sc-eQTL 5.69e-01 -0.0499 0.0874 0.759 cMono_S100A L2
ENSG00000028839 TBPL1 -423519 sc-eQTL 4.65e-01 0.103 0.14 0.752 gdT L2
ENSG00000112303 VNN2 765192 sc-eQTL 2.77e-02 -0.293 0.132 0.752 gdT L2
ENSG00000112306 RPS12 714082 sc-eQTL 7.45e-01 -0.0166 0.051 0.752 gdT L2
ENSG00000118515 SGK1 -789461 sc-eQTL 9.31e-02 -0.161 0.0952 0.752 gdT L2
ENSG00000146409 SLC18B1 715312 sc-eQTL 4.65e-01 0.0964 0.132 0.752 gdT L2
ENSG00000028839 TBPL1 -423519 sc-eQTL 5.19e-01 0.0691 0.107 0.767 intMono L2
ENSG00000093134 VNN3 793886 sc-eQTL 5.73e-01 0.0581 0.103 0.767 intMono L2
ENSG00000112299 VNN1 814596 sc-eQTL 8.97e-01 -0.0132 0.102 0.767 intMono L2
ENSG00000112303 VNN2 765192 sc-eQTL 1.59e-01 0.146 0.103 0.767 intMono L2
ENSG00000112306 RPS12 714082 sc-eQTL 9.14e-01 -0.00488 0.0451 0.767 intMono L2
ENSG00000118515 SGK1 -789461 sc-eQTL 2.74e-01 -0.0829 0.0755 0.767 intMono L2
ENSG00000146409 SLC18B1 715312 sc-eQTL 8.73e-01 0.0176 0.11 0.767 intMono L2
ENSG00000286887 AL355881.1 -767650 sc-eQTL 3.46e-01 -0.0989 0.105 0.767 intMono L2
ENSG00000028839 TBPL1 -423519 sc-eQTL 9.56e-01 -0.00617 0.111 0.751 ncMono L2
ENSG00000093134 VNN3 793886 sc-eQTL 2.32e-01 0.127 0.106 0.751 ncMono L2
ENSG00000112299 VNN1 814596 sc-eQTL 8.21e-01 0.0239 0.106 0.751 ncMono L2
ENSG00000112303 VNN2 765192 sc-eQTL 3.53e-01 0.0943 0.101 0.751 ncMono L2
ENSG00000112306 RPS12 714082 sc-eQTL 8.89e-01 -0.00712 0.0509 0.751 ncMono L2
ENSG00000118515 SGK1 -789461 sc-eQTL 4.88e-01 -0.05 0.0719 0.751 ncMono L2
ENSG00000146409 SLC18B1 715312 sc-eQTL 9.93e-01 0.000755 0.0899 0.751 ncMono L2
ENSG00000286887 AL355881.1 -767650 sc-eQTL 8.43e-02 -0.164 0.0944 0.751 ncMono L2
ENSG00000028839 TBPL1 -423519 sc-eQTL 8.14e-01 -0.0299 0.127 0.768 pDC L2
ENSG00000093134 VNN3 793886 sc-eQTL 7.95e-01 -0.0222 0.0851 0.768 pDC L2
ENSG00000112299 VNN1 814596 sc-eQTL 2.83e-04 0.308 0.083 0.768 pDC L2
ENSG00000112303 VNN2 765192 sc-eQTL 3.27e-01 0.101 0.103 0.768 pDC L2
ENSG00000112306 RPS12 714082 sc-eQTL 3.92e-01 0.0608 0.0709 0.768 pDC L2
ENSG00000118515 SGK1 -789461 sc-eQTL 6.81e-01 -0.0297 0.0721 0.768 pDC L2
ENSG00000146409 SLC18B1 715312 sc-eQTL 1.02e-02 -0.268 0.103 0.768 pDC L2
ENSG00000286438 AL591115.1 425523 sc-eQTL 5.47e-01 0.0607 0.1 0.768 pDC L2
ENSG00000286887 AL355881.1 -767650 sc-eQTL 6.77e-01 0.0372 0.0892 0.768 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -423519 sc-eQTL 9.76e-01 0.00325 0.107 0.759 B_Memory LOneK1K
ENSG00000112303 VNN2 765192 sc-eQTL 3.97e-02 0.192 0.0926 0.759 B_Memory LOneK1K
ENSG00000112306 RPS12 714082 sc-eQTL 6.87e-01 0.0215 0.0533 0.759 B_Memory LOneK1K
ENSG00000118515 SGK1 -789461 sc-eQTL 2.43e-01 -0.0972 0.083 0.759 B_Memory LOneK1K
ENSG00000146409 SLC18B1 715312 sc-eQTL 6.71e-01 0.0416 0.0978 0.759 B_Memory LOneK1K
ENSG00000028839 TBPL1 -423519 sc-eQTL 2.14e-02 0.241 0.104 0.759 B_Naive LOneK1K
ENSG00000112303 VNN2 765192 sc-eQTL 9.84e-01 0.00186 0.0922 0.759 B_Naive LOneK1K
ENSG00000112306 RPS12 714082 sc-eQTL 3.26e-01 0.0549 0.0557 0.759 B_Naive LOneK1K
ENSG00000118515 SGK1 -789461 sc-eQTL 8.88e-01 0.0122 0.0864 0.759 B_Naive LOneK1K
ENSG00000146409 SLC18B1 715312 sc-eQTL 3.42e-01 0.1 0.105 0.759 B_Naive LOneK1K
ENSG00000028839 TBPL1 -423519 sc-eQTL 7.48e-01 0.0271 0.084 0.759 CD14_Mono LOneK1K
ENSG00000093134 VNN3 793886 sc-eQTL 8.57e-01 0.0171 0.0952 0.759 CD14_Mono LOneK1K
ENSG00000112299 VNN1 814596 sc-eQTL 8.93e-01 0.0133 0.0993 0.759 CD14_Mono LOneK1K
ENSG00000112303 VNN2 765192 sc-eQTL 7.05e-02 0.118 0.0651 0.759 CD14_Mono LOneK1K
ENSG00000112306 RPS12 714082 sc-eQTL 6.31e-01 -0.0216 0.045 0.759 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -789461 sc-eQTL 4.69e-01 -0.0444 0.0613 0.759 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 715312 sc-eQTL 5.25e-02 0.155 0.0794 0.759 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -767650 sc-eQTL 1.51e-01 -0.12 0.0836 0.759 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -423519 sc-eQTL 7.18e-01 0.0389 0.108 0.761 CD16_Mono LOneK1K
ENSG00000093134 VNN3 793886 sc-eQTL 2.22e-01 0.127 0.104 0.761 CD16_Mono LOneK1K
ENSG00000112299 VNN1 814596 sc-eQTL 7.08e-01 0.0389 0.103 0.761 CD16_Mono LOneK1K
ENSG00000112303 VNN2 765192 sc-eQTL 1.77e-01 0.132 0.0971 0.761 CD16_Mono LOneK1K
ENSG00000112306 RPS12 714082 sc-eQTL 9.25e-01 -0.00389 0.0414 0.761 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -789461 sc-eQTL 2.86e-01 -0.0668 0.0625 0.761 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 715312 sc-eQTL 7.00e-01 -0.0387 0.1 0.761 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -767650 sc-eQTL 1.44e-02 -0.221 0.0896 0.761 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -423519 sc-eQTL 6.54e-01 -0.0394 0.0879 0.763 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 765192 sc-eQTL 6.56e-01 -0.0466 0.104 0.763 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 714082 sc-eQTL 9.49e-01 0.00275 0.0427 0.763 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -789461 sc-eQTL 4.41e-02 -0.177 0.0873 0.763 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000112303 VNN2 765192 pQTL 0.0356 0.0595 0.0283 0.0 0.0 0.27
ENSG00000112303 VNN2 765192 eQTL 0.0157 0.0354 0.0146 0.0 0.0 0.278

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina