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Genes within 1Mb (chr6:133502320:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -449850 sc-eQTL 4.14e-01 0.0729 0.089 0.321 B L1
ENSG00000079950 STX7 989122 sc-eQTL 2.27e-01 0.0429 0.0354 0.321 B L1
ENSG00000112303 VNN2 738861 sc-eQTL 9.19e-01 -0.00682 0.0667 0.321 B L1
ENSG00000112306 RPS12 687751 sc-eQTL 8.35e-01 -0.00839 0.0403 0.321 B L1
ENSG00000118515 SGK1 -815792 sc-eQTL 4.89e-01 0.0431 0.0622 0.321 B L1
ENSG00000146409 SLC18B1 688981 sc-eQTL 2.84e-01 0.091 0.0847 0.321 B L1
ENSG00000028839 TBPL1 -449850 sc-eQTL 3.27e-01 -0.0653 0.0665 0.321 CD4T L1
ENSG00000079950 STX7 989122 sc-eQTL 6.50e-02 0.127 0.0687 0.321 CD4T L1
ENSG00000112303 VNN2 738861 sc-eQTL 8.22e-01 0.0136 0.06 0.321 CD4T L1
ENSG00000112306 RPS12 687751 sc-eQTL 9.55e-01 -0.0023 0.0408 0.321 CD4T L1
ENSG00000118515 SGK1 -815792 sc-eQTL 5.93e-01 -0.0293 0.0548 0.321 CD4T L1
ENSG00000146409 SLC18B1 688981 sc-eQTL 6.63e-02 0.151 0.0819 0.321 CD4T L1
ENSG00000028839 TBPL1 -449850 sc-eQTL 9.59e-01 0.00338 0.0657 0.321 CD8T L1
ENSG00000079950 STX7 989122 sc-eQTL 4.71e-01 -0.0494 0.0685 0.321 CD8T L1
ENSG00000112303 VNN2 738861 sc-eQTL 7.30e-01 0.0277 0.08 0.321 CD8T L1
ENSG00000112306 RPS12 687751 sc-eQTL 2.76e-01 -0.0298 0.0273 0.321 CD8T L1
ENSG00000118515 SGK1 -815792 sc-eQTL 3.90e-01 -0.0363 0.0421 0.321 CD8T L1
ENSG00000146409 SLC18B1 688981 sc-eQTL 3.14e-01 0.0832 0.0825 0.321 CD8T L1
ENSG00000028839 TBPL1 -449850 sc-eQTL 8.69e-01 -0.0168 0.102 0.333 DC L1
ENSG00000079950 STX7 989122 sc-eQTL 8.75e-01 -0.00995 0.0632 0.333 DC L1
ENSG00000093134 VNN3 767555 sc-eQTL 9.02e-01 0.00964 0.0784 0.333 DC L1
ENSG00000112299 VNN1 788265 sc-eQTL 5.25e-02 0.164 0.0838 0.333 DC L1
ENSG00000112303 VNN2 738861 sc-eQTL 6.97e-01 -0.0352 0.0905 0.333 DC L1
ENSG00000112306 RPS12 687751 sc-eQTL 5.13e-01 -0.0332 0.0507 0.333 DC L1
ENSG00000118515 SGK1 -815792 sc-eQTL 5.52e-01 -0.0351 0.0588 0.333 DC L1
ENSG00000146409 SLC18B1 688981 sc-eQTL 9.43e-01 0.00572 0.0803 0.333 DC L1
ENSG00000286438 AL591115.1 399192 sc-eQTL 7.52e-02 0.13 0.0725 0.333 DC L1
ENSG00000286887 AL355881.1 -793981 sc-eQTL 3.12e-01 0.0921 0.0909 0.333 DC L1
ENSG00000028839 TBPL1 -449850 sc-eQTL 3.13e-01 0.071 0.0702 0.321 Mono L1
ENSG00000079950 STX7 989122 sc-eQTL 4.27e-01 0.0374 0.047 0.321 Mono L1
ENSG00000093134 VNN3 767555 sc-eQTL 2.71e-01 -0.0889 0.0806 0.321 Mono L1
ENSG00000112299 VNN1 788265 sc-eQTL 3.52e-01 0.0809 0.0868 0.321 Mono L1
ENSG00000112303 VNN2 738861 sc-eQTL 7.66e-01 -0.0183 0.0614 0.321 Mono L1
ENSG00000112306 RPS12 687751 sc-eQTL 7.30e-01 0.0127 0.0368 0.321 Mono L1
ENSG00000118515 SGK1 -815792 sc-eQTL 3.24e-01 -0.0512 0.0518 0.321 Mono L1
ENSG00000146409 SLC18B1 688981 sc-eQTL 7.58e-01 -0.0225 0.0728 0.321 Mono L1
ENSG00000286887 AL355881.1 -793981 sc-eQTL 9.72e-01 -0.00255 0.0715 0.321 Mono L1
ENSG00000028839 TBPL1 -449850 sc-eQTL 3.28e-01 0.075 0.0765 0.322 NK L1
ENSG00000079950 STX7 989122 sc-eQTL 5.57e-01 0.0417 0.0708 0.322 NK L1
ENSG00000112303 VNN2 738861 sc-eQTL 4.99e-01 -0.0597 0.0881 0.322 NK L1
ENSG00000112306 RPS12 687751 sc-eQTL 2.22e-01 -0.0445 0.0364 0.322 NK L1
ENSG00000118515 SGK1 -815792 sc-eQTL 7.95e-02 -0.118 0.067 0.322 NK L1
ENSG00000028839 TBPL1 -449850 sc-eQTL 4.12e-01 -0.0721 0.0877 0.321 Other_T L1
ENSG00000079950 STX7 989122 sc-eQTL 1.62e-01 0.0967 0.0688 0.321 Other_T L1
ENSG00000112303 VNN2 738861 sc-eQTL 6.72e-01 -0.0355 0.0836 0.321 Other_T L1
ENSG00000112306 RPS12 687751 sc-eQTL 1.66e-01 -0.0459 0.033 0.321 Other_T L1
ENSG00000118515 SGK1 -815792 sc-eQTL 9.93e-01 -0.000558 0.061 0.321 Other_T L1
ENSG00000146409 SLC18B1 688981 sc-eQTL 8.05e-01 -0.0224 0.0908 0.321 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -449850 sc-eQTL 9.16e-01 -0.0108 0.102 0.324 B_Activated L2
ENSG00000079950 STX7 989122 sc-eQTL 9.07e-01 -0.0102 0.0877 0.324 B_Activated L2
ENSG00000112303 VNN2 738861 sc-eQTL 2.96e-01 0.0975 0.093 0.324 B_Activated L2
ENSG00000112306 RPS12 687751 sc-eQTL 7.39e-01 0.0167 0.05 0.324 B_Activated L2
ENSG00000118515 SGK1 -815792 sc-eQTL 4.92e-01 0.0613 0.089 0.324 B_Activated L2
ENSG00000146409 SLC18B1 688981 sc-eQTL 8.72e-01 -0.0141 0.0876 0.324 B_Activated L2
ENSG00000028839 TBPL1 -449850 sc-eQTL 5.74e-01 0.0555 0.0985 0.32 B_Intermediate L2
ENSG00000079950 STX7 989122 sc-eQTL 8.55e-02 0.0972 0.0562 0.32 B_Intermediate L2
ENSG00000112303 VNN2 738861 sc-eQTL 6.71e-01 -0.0362 0.0853 0.32 B_Intermediate L2
ENSG00000112306 RPS12 687751 sc-eQTL 4.93e-01 -0.0358 0.0522 0.32 B_Intermediate L2
ENSG00000118515 SGK1 -815792 sc-eQTL 8.42e-01 -0.0181 0.0903 0.32 B_Intermediate L2
ENSG00000146409 SLC18B1 688981 sc-eQTL 7.11e-01 0.0349 0.0941 0.32 B_Intermediate L2
ENSG00000028839 TBPL1 -449850 sc-eQTL 9.59e-01 0.00483 0.0935 0.321 B_Memory L2
ENSG00000079950 STX7 989122 sc-eQTL 4.07e-02 0.138 0.067 0.321 B_Memory L2
ENSG00000112303 VNN2 738861 sc-eQTL 3.30e-01 0.0862 0.0883 0.321 B_Memory L2
ENSG00000112306 RPS12 687751 sc-eQTL 9.28e-01 -0.00385 0.0427 0.321 B_Memory L2
ENSG00000118515 SGK1 -815792 sc-eQTL 5.18e-02 0.152 0.0775 0.321 B_Memory L2
ENSG00000146409 SLC18B1 688981 sc-eQTL 5.72e-01 0.0503 0.0889 0.321 B_Memory L2
ENSG00000028839 TBPL1 -449850 sc-eQTL 7.18e-01 0.0323 0.0894 0.321 B_Naive1 L2
ENSG00000079950 STX7 989122 sc-eQTL 1.58e-01 0.0605 0.0428 0.321 B_Naive1 L2
ENSG00000112303 VNN2 738861 sc-eQTL 2.00e-01 -0.107 0.0831 0.321 B_Naive1 L2
ENSG00000112306 RPS12 687751 sc-eQTL 8.86e-01 0.0068 0.0475 0.321 B_Naive1 L2
ENSG00000118515 SGK1 -815792 sc-eQTL 4.30e-01 0.0587 0.0742 0.321 B_Naive1 L2
ENSG00000146409 SLC18B1 688981 sc-eQTL 1.76e-01 0.124 0.0913 0.321 B_Naive1 L2
ENSG00000028839 TBPL1 -449850 sc-eQTL 9.24e-02 0.158 0.0937 0.32 B_Naive2 L2
ENSG00000079950 STX7 989122 sc-eQTL 4.29e-01 0.0397 0.05 0.32 B_Naive2 L2
ENSG00000112303 VNN2 738861 sc-eQTL 9.79e-01 -0.00243 0.092 0.32 B_Naive2 L2
ENSG00000112306 RPS12 687751 sc-eQTL 9.22e-01 0.00479 0.0487 0.32 B_Naive2 L2
ENSG00000118515 SGK1 -815792 sc-eQTL 2.07e-01 0.109 0.0857 0.32 B_Naive2 L2
ENSG00000146409 SLC18B1 688981 sc-eQTL 7.79e-01 0.0261 0.0929 0.32 B_Naive2 L2
ENSG00000028839 TBPL1 -449850 sc-eQTL 8.72e-02 0.161 0.0935 0.32 CD4_CTL L2
ENSG00000079950 STX7 989122 sc-eQTL 4.24e-01 0.0748 0.0934 0.32 CD4_CTL L2
ENSG00000112303 VNN2 738861 sc-eQTL 8.59e-01 -0.0167 0.0943 0.32 CD4_CTL L2
ENSG00000112306 RPS12 687751 sc-eQTL 8.20e-01 -0.00991 0.0436 0.32 CD4_CTL L2
ENSG00000118515 SGK1 -815792 sc-eQTL 3.01e-01 0.0782 0.0754 0.32 CD4_CTL L2
ENSG00000146409 SLC18B1 688981 sc-eQTL 3.65e-01 0.0797 0.0877 0.32 CD4_CTL L2
ENSG00000028839 TBPL1 -449850 sc-eQTL 1.71e-01 -0.105 0.0767 0.321 CD4_Naive L2
ENSG00000079950 STX7 989122 sc-eQTL 3.59e-01 0.0693 0.0754 0.321 CD4_Naive L2
ENSG00000112303 VNN2 738861 sc-eQTL 7.94e-01 0.0183 0.07 0.321 CD4_Naive L2
ENSG00000112306 RPS12 687751 sc-eQTL 7.65e-01 0.0136 0.0454 0.321 CD4_Naive L2
ENSG00000118515 SGK1 -815792 sc-eQTL 5.54e-01 0.0329 0.0556 0.321 CD4_Naive L2
ENSG00000146409 SLC18B1 688981 sc-eQTL 1.59e-01 0.123 0.087 0.321 CD4_Naive L2
ENSG00000028839 TBPL1 -449850 sc-eQTL 6.34e-02 -0.152 0.0817 0.321 CD4_TCM L2
ENSG00000079950 STX7 989122 sc-eQTL 6.89e-02 0.15 0.0823 0.321 CD4_TCM L2
ENSG00000112303 VNN2 738861 sc-eQTL 5.30e-01 0.0514 0.0817 0.321 CD4_TCM L2
ENSG00000112306 RPS12 687751 sc-eQTL 1.45e-01 -0.0616 0.0422 0.321 CD4_TCM L2
ENSG00000118515 SGK1 -815792 sc-eQTL 1.72e-01 -0.0809 0.059 0.321 CD4_TCM L2
ENSG00000146409 SLC18B1 688981 sc-eQTL 2.94e-02 0.213 0.097 0.321 CD4_TCM L2
ENSG00000028839 TBPL1 -449850 sc-eQTL 9.90e-02 0.156 0.0941 0.321 CD4_TEM L2
ENSG00000079950 STX7 989122 sc-eQTL 9.24e-02 0.159 0.0941 0.321 CD4_TEM L2
ENSG00000112303 VNN2 738861 sc-eQTL 7.95e-01 0.0237 0.0909 0.321 CD4_TEM L2
ENSG00000112306 RPS12 687751 sc-eQTL 5.14e-01 -0.0244 0.0373 0.321 CD4_TEM L2
ENSG00000118515 SGK1 -815792 sc-eQTL 4.00e-01 -0.054 0.064 0.321 CD4_TEM L2
ENSG00000146409 SLC18B1 688981 sc-eQTL 9.95e-01 0.000584 0.0927 0.321 CD4_TEM L2
ENSG00000028839 TBPL1 -449850 sc-eQTL 4.85e-01 0.0577 0.0826 0.321 CD8_CTL L2
ENSG00000079950 STX7 989122 sc-eQTL 2.07e-01 -0.0973 0.077 0.321 CD8_CTL L2
ENSG00000112303 VNN2 738861 sc-eQTL 5.52e-01 0.0523 0.0877 0.321 CD8_CTL L2
ENSG00000112306 RPS12 687751 sc-eQTL 3.06e-01 -0.0481 0.0469 0.321 CD8_CTL L2
ENSG00000118515 SGK1 -815792 sc-eQTL 9.24e-01 -0.00757 0.0794 0.321 CD8_CTL L2
ENSG00000146409 SLC18B1 688981 sc-eQTL 4.99e-01 0.0616 0.0909 0.321 CD8_CTL L2
ENSG00000028839 TBPL1 -449850 sc-eQTL 7.39e-01 0.03 0.0898 0.321 CD8_Naive L2
ENSG00000079950 STX7 989122 sc-eQTL 6.23e-01 0.0471 0.0957 0.321 CD8_Naive L2
ENSG00000112303 VNN2 738861 sc-eQTL 5.32e-01 -0.0517 0.0826 0.321 CD8_Naive L2
ENSG00000112306 RPS12 687751 sc-eQTL 6.73e-01 0.02 0.0473 0.321 CD8_Naive L2
ENSG00000118515 SGK1 -815792 sc-eQTL 4.26e-01 -0.0473 0.0593 0.321 CD8_Naive L2
ENSG00000146409 SLC18B1 688981 sc-eQTL 8.60e-01 -0.0167 0.0949 0.321 CD8_Naive L2
ENSG00000028839 TBPL1 -449850 sc-eQTL 5.02e-01 -0.0662 0.0984 0.324 CD8_TCM L2
ENSG00000079950 STX7 989122 sc-eQTL 4.70e-01 0.066 0.0911 0.324 CD8_TCM L2
ENSG00000112303 VNN2 738861 sc-eQTL 4.73e-01 0.0649 0.0904 0.324 CD8_TCM L2
ENSG00000112306 RPS12 687751 sc-eQTL 2.39e-01 -0.0519 0.044 0.324 CD8_TCM L2
ENSG00000118515 SGK1 -815792 sc-eQTL 1.90e-01 0.0958 0.0727 0.324 CD8_TCM L2
ENSG00000146409 SLC18B1 688981 sc-eQTL 1.75e-01 0.131 0.0962 0.324 CD8_TCM L2
ENSG00000028839 TBPL1 -449850 sc-eQTL 4.43e-01 -0.0696 0.0905 0.322 CD8_TEM L2
ENSG00000079950 STX7 989122 sc-eQTL 2.91e-01 -0.104 0.0986 0.322 CD8_TEM L2
ENSG00000112303 VNN2 738861 sc-eQTL 9.92e-02 0.162 0.0977 0.322 CD8_TEM L2
ENSG00000112306 RPS12 687751 sc-eQTL 4.11e-01 0.0435 0.0528 0.322 CD8_TEM L2
ENSG00000118515 SGK1 -815792 sc-eQTL 8.33e-01 -0.0184 0.0867 0.322 CD8_TEM L2
ENSG00000146409 SLC18B1 688981 sc-eQTL 3.41e-01 0.0953 0.0998 0.322 CD8_TEM L2
ENSG00000028839 TBPL1 -449850 sc-eQTL 2.18e-01 -0.116 0.0941 0.323 MAIT L2
ENSG00000079950 STX7 989122 sc-eQTL 2.02e-01 0.115 0.0894 0.323 MAIT L2
ENSG00000112303 VNN2 738861 sc-eQTL 7.03e-01 0.0349 0.0912 0.323 MAIT L2
ENSG00000112306 RPS12 687751 sc-eQTL 3.38e-02 -0.0949 0.0444 0.323 MAIT L2
ENSG00000118515 SGK1 -815792 sc-eQTL 4.19e-01 -0.0511 0.0631 0.323 MAIT L2
ENSG00000146409 SLC18B1 688981 sc-eQTL 7.90e-01 0.025 0.0941 0.323 MAIT L2
ENSG00000028839 TBPL1 -449850 sc-eQTL 4.16e-01 -0.0819 0.1 0.32 NK_CD56bright L2
ENSG00000079950 STX7 989122 sc-eQTL 4.75e-01 0.0666 0.0932 0.32 NK_CD56bright L2
ENSG00000112303 VNN2 738861 sc-eQTL 7.55e-01 -0.0296 0.0947 0.32 NK_CD56bright L2
ENSG00000112306 RPS12 687751 sc-eQTL 2.37e-01 -0.0624 0.0526 0.32 NK_CD56bright L2
ENSG00000118515 SGK1 -815792 sc-eQTL 1.72e-01 -0.108 0.0785 0.32 NK_CD56bright L2
ENSG00000028839 TBPL1 -449850 sc-eQTL 2.10e-01 0.103 0.082 0.323 NK_CD56dim L2
ENSG00000079950 STX7 989122 sc-eQTL 9.89e-01 0.00105 0.0753 0.323 NK_CD56dim L2
ENSG00000112303 VNN2 738861 sc-eQTL 3.52e-02 -0.198 0.0932 0.323 NK_CD56dim L2
ENSG00000112306 RPS12 687751 sc-eQTL 1.72e-01 -0.051 0.0372 0.323 NK_CD56dim L2
ENSG00000118515 SGK1 -815792 sc-eQTL 8.80e-01 -0.0125 0.0828 0.323 NK_CD56dim L2
ENSG00000028839 TBPL1 -449850 sc-eQTL 8.93e-01 -0.0138 0.102 0.32 NK_HLA L2
ENSG00000079950 STX7 989122 sc-eQTL 6.14e-01 0.0471 0.0931 0.32 NK_HLA L2
ENSG00000112303 VNN2 738861 sc-eQTL 8.15e-01 -0.0222 0.0943 0.32 NK_HLA L2
ENSG00000112306 RPS12 687751 sc-eQTL 8.01e-01 -0.0111 0.0439 0.32 NK_HLA L2
ENSG00000118515 SGK1 -815792 sc-eQTL 4.53e-01 0.0652 0.0867 0.32 NK_HLA L2
ENSG00000028839 TBPL1 -449850 sc-eQTL 7.93e-01 0.0222 0.0849 0.323 NK_cytokine L2
ENSG00000079950 STX7 989122 sc-eQTL 1.56e-01 0.117 0.0818 0.323 NK_cytokine L2
ENSG00000112303 VNN2 738861 sc-eQTL 2.04e-01 0.117 0.0921 0.323 NK_cytokine L2
ENSG00000112306 RPS12 687751 sc-eQTL 8.98e-01 -0.00641 0.0501 0.323 NK_cytokine L2
ENSG00000118515 SGK1 -815792 sc-eQTL 1.84e-01 -0.111 0.0831 0.323 NK_cytokine L2
ENSG00000028839 TBPL1 -449850 sc-eQTL 4.78e-01 -0.0805 0.113 0.322 PB L2
ENSG00000079950 STX7 989122 sc-eQTL 2.96e-01 -0.0843 0.0803 0.322 PB L2
ENSG00000112303 VNN2 738861 sc-eQTL 9.74e-01 -0.00324 0.0986 0.322 PB L2
ENSG00000112306 RPS12 687751 sc-eQTL 1.67e-01 -0.0772 0.0555 0.322 PB L2
ENSG00000118515 SGK1 -815792 sc-eQTL 8.86e-01 0.013 0.0904 0.322 PB L2
ENSG00000146409 SLC18B1 688981 sc-eQTL 6.02e-01 0.0548 0.105 0.322 PB L2
ENSG00000028839 TBPL1 -449850 sc-eQTL 6.92e-01 -0.0377 0.095 0.32 Pro_T L2
ENSG00000079950 STX7 989122 sc-eQTL 1.38e-01 0.126 0.0845 0.32 Pro_T L2
ENSG00000112303 VNN2 738861 sc-eQTL 9.07e-01 0.0106 0.0911 0.32 Pro_T L2
ENSG00000112306 RPS12 687751 sc-eQTL 1.63e-01 -0.048 0.0343 0.32 Pro_T L2
ENSG00000118515 SGK1 -815792 sc-eQTL 6.06e-01 0.0356 0.069 0.32 Pro_T L2
ENSG00000146409 SLC18B1 688981 sc-eQTL 8.01e-01 -0.0225 0.0891 0.32 Pro_T L2
ENSG00000028839 TBPL1 -449850 sc-eQTL 9.96e-01 -0.000442 0.0976 0.321 Treg L2
ENSG00000079950 STX7 989122 sc-eQTL 2.09e-01 0.116 0.0917 0.321 Treg L2
ENSG00000112303 VNN2 738861 sc-eQTL 3.80e-01 0.0679 0.0773 0.321 Treg L2
ENSG00000112306 RPS12 687751 sc-eQTL 7.79e-01 0.00963 0.0342 0.321 Treg L2
ENSG00000118515 SGK1 -815792 sc-eQTL 1.19e-01 -0.112 0.0717 0.321 Treg L2
ENSG00000146409 SLC18B1 688981 sc-eQTL 6.06e-01 -0.05 0.0967 0.321 Treg L2
ENSG00000028839 TBPL1 -449850 sc-eQTL 9.65e-01 0.00448 0.102 0.344 cDC L2
ENSG00000079950 STX7 989122 sc-eQTL 6.65e-01 0.0346 0.0797 0.344 cDC L2
ENSG00000093134 VNN3 767555 sc-eQTL 8.29e-01 -0.0171 0.0791 0.344 cDC L2
ENSG00000112299 VNN1 788265 sc-eQTL 1.43e-01 0.136 0.0925 0.344 cDC L2
ENSG00000112303 VNN2 738861 sc-eQTL 9.04e-01 0.0109 0.0907 0.344 cDC L2
ENSG00000112306 RPS12 687751 sc-eQTL 8.44e-01 -0.00882 0.0448 0.344 cDC L2
ENSG00000118515 SGK1 -815792 sc-eQTL 8.71e-01 0.0123 0.0754 0.344 cDC L2
ENSG00000146409 SLC18B1 688981 sc-eQTL 4.86e-01 0.0618 0.0886 0.344 cDC L2
ENSG00000286438 AL591115.1 399192 sc-eQTL 2.96e-01 0.074 0.0707 0.344 cDC L2
ENSG00000286887 AL355881.1 -793981 sc-eQTL 2.12e-01 0.109 0.0868 0.344 cDC L2
ENSG00000028839 TBPL1 -449850 sc-eQTL 5.26e-01 0.051 0.0802 0.321 cMono_IL1B L2
ENSG00000079950 STX7 989122 sc-eQTL 7.27e-01 -0.0213 0.0609 0.321 cMono_IL1B L2
ENSG00000093134 VNN3 767555 sc-eQTL 7.06e-01 -0.0325 0.086 0.321 cMono_IL1B L2
ENSG00000112299 VNN1 788265 sc-eQTL 4.62e-01 0.0639 0.0867 0.321 cMono_IL1B L2
ENSG00000112303 VNN2 738861 sc-eQTL 8.92e-01 0.00946 0.0694 0.321 cMono_IL1B L2
ENSG00000112306 RPS12 687751 sc-eQTL 7.86e-01 0.0105 0.0386 0.321 cMono_IL1B L2
ENSG00000118515 SGK1 -815792 sc-eQTL 4.37e-01 -0.0447 0.0574 0.321 cMono_IL1B L2
ENSG00000146409 SLC18B1 688981 sc-eQTL 7.26e-01 0.0261 0.0744 0.321 cMono_IL1B L2
ENSG00000286887 AL355881.1 -793981 sc-eQTL 5.26e-01 0.0492 0.0774 0.321 cMono_IL1B L2
ENSG00000028839 TBPL1 -449850 sc-eQTL 8.04e-01 0.0226 0.0909 0.321 cMono_S100A L2
ENSG00000079950 STX7 989122 sc-eQTL 1.65e-01 0.0911 0.0654 0.321 cMono_S100A L2
ENSG00000093134 VNN3 767555 sc-eQTL 2.68e-01 -0.0908 0.0818 0.321 cMono_S100A L2
ENSG00000112299 VNN1 788265 sc-eQTL 2.23e-01 0.108 0.0887 0.321 cMono_S100A L2
ENSG00000112303 VNN2 738861 sc-eQTL 5.67e-01 -0.0334 0.0583 0.321 cMono_S100A L2
ENSG00000112306 RPS12 687751 sc-eQTL 6.85e-01 0.017 0.042 0.321 cMono_S100A L2
ENSG00000118515 SGK1 -815792 sc-eQTL 8.64e-01 -0.00821 0.048 0.321 cMono_S100A L2
ENSG00000146409 SLC18B1 688981 sc-eQTL 3.46e-01 -0.0733 0.0776 0.321 cMono_S100A L2
ENSG00000286887 AL355881.1 -793981 sc-eQTL 7.86e-01 -0.0206 0.076 0.321 cMono_S100A L2
ENSG00000028839 TBPL1 -449850 sc-eQTL 1.68e-01 0.165 0.119 0.315 gdT L2
ENSG00000079950 STX7 989122 sc-eQTL 5.31e-01 0.0647 0.103 0.315 gdT L2
ENSG00000112303 VNN2 738861 sc-eQTL 5.18e-03 -0.315 0.111 0.315 gdT L2
ENSG00000112306 RPS12 687751 sc-eQTL 3.55e-01 -0.0402 0.0433 0.315 gdT L2
ENSG00000118515 SGK1 -815792 sc-eQTL 1.68e-01 0.113 0.0815 0.315 gdT L2
ENSG00000146409 SLC18B1 688981 sc-eQTL 5.29e-01 -0.0707 0.112 0.315 gdT L2
ENSG00000028839 TBPL1 -449850 sc-eQTL 4.75e-02 0.183 0.0919 0.329 intMono L2
ENSG00000079950 STX7 989122 sc-eQTL 6.45e-01 -0.0409 0.0886 0.329 intMono L2
ENSG00000093134 VNN3 767555 sc-eQTL 4.16e-01 -0.0728 0.0893 0.329 intMono L2
ENSG00000112299 VNN1 788265 sc-eQTL 4.16e-01 0.072 0.0883 0.329 intMono L2
ENSG00000112303 VNN2 738861 sc-eQTL 3.83e-02 0.185 0.0889 0.329 intMono L2
ENSG00000112306 RPS12 687751 sc-eQTL 4.62e-01 -0.0288 0.0391 0.329 intMono L2
ENSG00000118515 SGK1 -815792 sc-eQTL 3.06e-01 -0.0673 0.0655 0.329 intMono L2
ENSG00000146409 SLC18B1 688981 sc-eQTL 1.47e-01 0.138 0.0947 0.329 intMono L2
ENSG00000286887 AL355881.1 -793981 sc-eQTL 3.01e-01 0.0942 0.0908 0.329 intMono L2
ENSG00000028839 TBPL1 -449850 sc-eQTL 7.20e-01 0.0346 0.0964 0.321 ncMono L2
ENSG00000079950 STX7 989122 sc-eQTL 8.78e-01 0.00999 0.0652 0.321 ncMono L2
ENSG00000093134 VNN3 767555 sc-eQTL 6.54e-01 -0.0413 0.092 0.321 ncMono L2
ENSG00000112299 VNN1 788265 sc-eQTL 3.35e-01 0.0881 0.0911 0.321 ncMono L2
ENSG00000112303 VNN2 738861 sc-eQTL 4.69e-01 0.0637 0.0877 0.321 ncMono L2
ENSG00000112306 RPS12 687751 sc-eQTL 6.15e-01 0.0222 0.044 0.321 ncMono L2
ENSG00000118515 SGK1 -815792 sc-eQTL 1.68e-01 0.0859 0.062 0.321 ncMono L2
ENSG00000146409 SLC18B1 688981 sc-eQTL 6.13e-01 0.0393 0.0778 0.321 ncMono L2
ENSG00000286887 AL355881.1 -793981 sc-eQTL 3.93e-01 0.0703 0.0821 0.321 ncMono L2
ENSG00000028839 TBPL1 -449850 sc-eQTL 8.47e-01 -0.0217 0.113 0.325 pDC L2
ENSG00000079950 STX7 989122 sc-eQTL 6.44e-01 -0.0347 0.0749 0.325 pDC L2
ENSG00000093134 VNN3 767555 sc-eQTL 8.59e-01 -0.0134 0.0755 0.325 pDC L2
ENSG00000112299 VNN1 788265 sc-eQTL 1.83e-01 0.102 0.0764 0.325 pDC L2
ENSG00000112303 VNN2 738861 sc-eQTL 2.67e-01 -0.102 0.0911 0.325 pDC L2
ENSG00000112306 RPS12 687751 sc-eQTL 3.92e-01 0.0539 0.0628 0.325 pDC L2
ENSG00000118515 SGK1 -815792 sc-eQTL 8.52e-01 -0.012 0.064 0.325 pDC L2
ENSG00000146409 SLC18B1 688981 sc-eQTL 3.28e-01 -0.0913 0.093 0.325 pDC L2
ENSG00000286438 AL591115.1 399192 sc-eQTL 1.54e-01 0.127 0.0886 0.325 pDC L2
ENSG00000286887 AL355881.1 -793981 sc-eQTL 4.43e-01 0.0608 0.079 0.325 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -449850 sc-eQTL 2.19e-01 0.118 0.0958 0.321 B_Memory LOneK1K
ENSG00000079950 STX7 989122 sc-eQTL 1.14e-01 0.0835 0.0526 0.321 B_Memory LOneK1K
ENSG00000112303 VNN2 738861 sc-eQTL 3.55e-01 0.0774 0.0836 0.321 B_Memory LOneK1K
ENSG00000112306 RPS12 687751 sc-eQTL 9.69e-01 0.00189 0.0477 0.321 B_Memory LOneK1K
ENSG00000118515 SGK1 -815792 sc-eQTL 5.25e-01 0.0475 0.0745 0.321 B_Memory LOneK1K
ENSG00000146409 SLC18B1 688981 sc-eQTL 2.81e-01 0.0943 0.0873 0.321 B_Memory LOneK1K
ENSG00000028839 TBPL1 -449850 sc-eQTL 1.04e-01 0.143 0.0877 0.321 B_Naive LOneK1K
ENSG00000079950 STX7 989122 sc-eQTL 1.72e-01 0.0542 0.0396 0.321 B_Naive LOneK1K
ENSG00000112303 VNN2 738861 sc-eQTL 4.72e-01 -0.0556 0.0771 0.321 B_Naive LOneK1K
ENSG00000112306 RPS12 687751 sc-eQTL 8.36e-01 0.00971 0.0467 0.321 B_Naive LOneK1K
ENSG00000118515 SGK1 -815792 sc-eQTL 3.27e-01 0.0709 0.0722 0.321 B_Naive LOneK1K
ENSG00000146409 SLC18B1 688981 sc-eQTL 3.49e-01 0.0826 0.088 0.321 B_Naive LOneK1K
ENSG00000028839 TBPL1 -449850 sc-eQTL 5.24e-01 0.0469 0.0734 0.321 CD14_Mono LOneK1K
ENSG00000079950 STX7 989122 sc-eQTL 5.32e-01 0.0319 0.051 0.321 CD14_Mono LOneK1K
ENSG00000093134 VNN3 767555 sc-eQTL 3.97e-01 -0.0706 0.0831 0.321 CD14_Mono LOneK1K
ENSG00000112299 VNN1 788265 sc-eQTL 2.14e-01 0.108 0.0865 0.321 CD14_Mono LOneK1K
ENSG00000112303 VNN2 738861 sc-eQTL 8.52e-01 -0.0107 0.0574 0.321 CD14_Mono LOneK1K
ENSG00000112306 RPS12 687751 sc-eQTL 7.39e-01 0.0131 0.0393 0.321 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -815792 sc-eQTL 4.15e-01 -0.0438 0.0535 0.321 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 688981 sc-eQTL 7.20e-01 -0.0252 0.07 0.321 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -793981 sc-eQTL 8.93e-01 0.00989 0.0734 0.321 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -449850 sc-eQTL 2.68e-01 0.104 0.0936 0.323 CD16_Mono LOneK1K
ENSG00000079950 STX7 989122 sc-eQTL 6.83e-01 -0.0253 0.0619 0.323 CD16_Mono LOneK1K
ENSG00000093134 VNN3 767555 sc-eQTL 3.57e-01 -0.0839 0.091 0.323 CD16_Mono LOneK1K
ENSG00000112299 VNN1 788265 sc-eQTL 2.17e-01 0.112 0.09 0.323 CD16_Mono LOneK1K
ENSG00000112303 VNN2 738861 sc-eQTL 1.13e-01 0.135 0.0847 0.323 CD16_Mono LOneK1K
ENSG00000112306 RPS12 687751 sc-eQTL 9.19e-01 0.00366 0.0361 0.323 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -815792 sc-eQTL 9.72e-01 0.0019 0.0547 0.323 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 688981 sc-eQTL 5.90e-01 0.0473 0.0877 0.323 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -793981 sc-eQTL 5.20e-01 0.0511 0.0792 0.323 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -449850 sc-eQTL 2.53e-01 0.0862 0.0752 0.323 NK_CD56dim LOneK1K
ENSG00000079950 STX7 989122 sc-eQTL 4.53e-01 0.0532 0.0708 0.323 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 738861 sc-eQTL 4.26e-01 -0.0714 0.0896 0.323 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 687751 sc-eQTL 2.49e-01 -0.0423 0.0365 0.323 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -815792 sc-eQTL 4.02e-01 -0.0634 0.0755 0.323 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079950 STX7 989122 pQTL 0.146 -0.0346 0.0238 0.00134 0.0 0.327
ENSG00000079950 STX7 989122 eQTL 0.013 0.042 0.0169 0.0 0.0 0.316
ENSG00000112299 VNN1 788265 pQTL 0.0114 0.0931 0.0367 0.0 0.0 0.327
ENSG00000112303 VNN2 738861 eQTL 0.0425 0.028 0.0138 0.0 0.0 0.316
ENSG00000146409 SLC18B1 688981 eQTL 0.0144 0.0581 0.0237 0.0 0.0 0.316

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina