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Genes within 1Mb (chr6:133476070:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -476100 sc-eQTL 9.36e-01 0.00698 0.0872 0.338 B L1
ENSG00000079950 STX7 962872 sc-eQTL 2.74e-01 -0.0379 0.0346 0.338 B L1
ENSG00000112303 VNN2 712611 sc-eQTL 3.21e-01 0.0648 0.0651 0.338 B L1
ENSG00000112306 RPS12 661501 sc-eQTL 8.74e-01 0.00627 0.0395 0.338 B L1
ENSG00000118515 SGK1 -842042 sc-eQTL 7.68e-02 -0.107 0.0604 0.338 B L1
ENSG00000146409 SLC18B1 662731 sc-eQTL 6.01e-01 -0.0435 0.083 0.338 B L1
ENSG00000028839 TBPL1 -476100 sc-eQTL 5.06e-02 -0.126 0.064 0.338 CD4T L1
ENSG00000079950 STX7 962872 sc-eQTL 8.57e-01 -0.0121 0.0672 0.338 CD4T L1
ENSG00000112303 VNN2 712611 sc-eQTL 3.38e-01 0.0557 0.0581 0.338 CD4T L1
ENSG00000112306 RPS12 661501 sc-eQTL 3.91e-01 0.034 0.0395 0.338 CD4T L1
ENSG00000118515 SGK1 -842042 sc-eQTL 6.91e-01 0.0212 0.0532 0.338 CD4T L1
ENSG00000146409 SLC18B1 662731 sc-eQTL 4.72e-01 -0.0576 0.0799 0.338 CD4T L1
ENSG00000028839 TBPL1 -476100 sc-eQTL 5.64e-01 0.0374 0.0647 0.338 CD8T L1
ENSG00000079950 STX7 962872 sc-eQTL 8.20e-01 0.0154 0.0676 0.338 CD8T L1
ENSG00000112303 VNN2 712611 sc-eQTL 6.07e-02 0.148 0.0783 0.338 CD8T L1
ENSG00000112306 RPS12 661501 sc-eQTL 6.61e-01 0.0118 0.027 0.338 CD8T L1
ENSG00000118515 SGK1 -842042 sc-eQTL 9.39e-02 0.0695 0.0413 0.338 CD8T L1
ENSG00000146409 SLC18B1 662731 sc-eQTL 4.37e-01 -0.0634 0.0815 0.338 CD8T L1
ENSG00000028839 TBPL1 -476100 sc-eQTL 6.20e-01 0.0497 0.1 0.342 DC L1
ENSG00000079950 STX7 962872 sc-eQTL 5.24e-01 0.0397 0.0622 0.342 DC L1
ENSG00000093134 VNN3 741305 sc-eQTL 7.97e-01 -0.0199 0.0772 0.342 DC L1
ENSG00000112299 VNN1 762015 sc-eQTL 6.14e-01 -0.042 0.0833 0.342 DC L1
ENSG00000112303 VNN2 712611 sc-eQTL 5.12e-01 0.0585 0.089 0.342 DC L1
ENSG00000112306 RPS12 661501 sc-eQTL 5.66e-01 0.0287 0.0499 0.342 DC L1
ENSG00000118515 SGK1 -842042 sc-eQTL 4.25e-01 -0.0463 0.0579 0.342 DC L1
ENSG00000146409 SLC18B1 662731 sc-eQTL 3.17e-01 -0.0792 0.0789 0.342 DC L1
ENSG00000286438 AL591115.1 372942 sc-eQTL 7.43e-01 -0.0236 0.072 0.342 DC L1
ENSG00000286887 AL355881.1 -820231 sc-eQTL 2.03e-01 -0.114 0.0894 0.342 DC L1
ENSG00000028839 TBPL1 -476100 sc-eQTL 4.84e-01 -0.0472 0.0673 0.338 Mono L1
ENSG00000079950 STX7 962872 sc-eQTL 2.15e-01 -0.0558 0.0449 0.338 Mono L1
ENSG00000093134 VNN3 741305 sc-eQTL 3.11e-02 -0.166 0.0766 0.338 Mono L1
ENSG00000112299 VNN1 762015 sc-eQTL 1.32e-01 -0.125 0.0828 0.338 Mono L1
ENSG00000112303 VNN2 712611 sc-eQTL 3.47e-02 0.124 0.0582 0.338 Mono L1
ENSG00000112306 RPS12 661501 sc-eQTL 6.76e-01 -0.0148 0.0352 0.338 Mono L1
ENSG00000118515 SGK1 -842042 sc-eQTL 8.51e-01 0.00933 0.0497 0.338 Mono L1
ENSG00000146409 SLC18B1 662731 sc-eQTL 1.55e-01 0.0991 0.0693 0.338 Mono L1
ENSG00000286887 AL355881.1 -820231 sc-eQTL 3.19e-02 -0.146 0.0677 0.338 Mono L1
ENSG00000028839 TBPL1 -476100 sc-eQTL 9.50e-01 0.0047 0.0751 0.337 NK L1
ENSG00000079950 STX7 962872 sc-eQTL 7.23e-01 0.0246 0.0694 0.337 NK L1
ENSG00000112303 VNN2 712611 sc-eQTL 4.42e-01 0.0664 0.0863 0.337 NK L1
ENSG00000112306 RPS12 661501 sc-eQTL 7.71e-01 0.0104 0.0357 0.337 NK L1
ENSG00000118515 SGK1 -842042 sc-eQTL 6.62e-01 -0.029 0.0661 0.337 NK L1
ENSG00000028839 TBPL1 -476100 sc-eQTL 4.18e-01 -0.0716 0.0882 0.338 Other_T L1
ENSG00000079950 STX7 962872 sc-eQTL 2.72e-01 -0.0763 0.0694 0.338 Other_T L1
ENSG00000112303 VNN2 712611 sc-eQTL 4.86e-01 -0.0587 0.084 0.338 Other_T L1
ENSG00000112306 RPS12 661501 sc-eQTL 4.34e-01 0.0261 0.0333 0.338 Other_T L1
ENSG00000118515 SGK1 -842042 sc-eQTL 3.16e-01 -0.0615 0.0612 0.338 Other_T L1
ENSG00000146409 SLC18B1 662731 sc-eQTL 4.25e-01 -0.0729 0.0912 0.338 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -476100 sc-eQTL 7.98e-01 0.0272 0.106 0.339 B_Activated L2
ENSG00000079950 STX7 962872 sc-eQTL 7.92e-01 -0.024 0.0908 0.339 B_Activated L2
ENSG00000112303 VNN2 712611 sc-eQTL 3.60e-01 -0.0884 0.0964 0.339 B_Activated L2
ENSG00000112306 RPS12 661501 sc-eQTL 3.10e-01 0.0526 0.0516 0.339 B_Activated L2
ENSG00000118515 SGK1 -842042 sc-eQTL 3.58e-01 -0.085 0.0921 0.339 B_Activated L2
ENSG00000146409 SLC18B1 662731 sc-eQTL 7.91e-01 0.024 0.0907 0.339 B_Activated L2
ENSG00000028839 TBPL1 -476100 sc-eQTL 7.10e-01 -0.0366 0.0982 0.339 B_Intermediate L2
ENSG00000079950 STX7 962872 sc-eQTL 2.21e-01 -0.069 0.0562 0.339 B_Intermediate L2
ENSG00000112303 VNN2 712611 sc-eQTL 2.66e-01 0.0944 0.0847 0.339 B_Intermediate L2
ENSG00000112306 RPS12 661501 sc-eQTL 5.72e-01 0.0294 0.052 0.339 B_Intermediate L2
ENSG00000118515 SGK1 -842042 sc-eQTL 1.49e-01 -0.13 0.0895 0.339 B_Intermediate L2
ENSG00000146409 SLC18B1 662731 sc-eQTL 6.89e-01 0.0376 0.0937 0.339 B_Intermediate L2
ENSG00000028839 TBPL1 -476100 sc-eQTL 2.27e-01 -0.115 0.0949 0.336 B_Memory L2
ENSG00000079950 STX7 962872 sc-eQTL 6.98e-01 -0.0268 0.0689 0.336 B_Memory L2
ENSG00000112303 VNN2 712611 sc-eQTL 6.73e-01 -0.0381 0.0901 0.336 B_Memory L2
ENSG00000112306 RPS12 661501 sc-eQTL 3.68e-01 -0.0391 0.0434 0.336 B_Memory L2
ENSG00000118515 SGK1 -842042 sc-eQTL 3.39e-04 -0.282 0.0773 0.336 B_Memory L2
ENSG00000146409 SLC18B1 662731 sc-eQTL 8.95e-01 -0.0119 0.0907 0.336 B_Memory L2
ENSG00000028839 TBPL1 -476100 sc-eQTL 9.51e-01 0.00542 0.0886 0.338 B_Naive1 L2
ENSG00000079950 STX7 962872 sc-eQTL 3.28e-01 -0.0416 0.0425 0.338 B_Naive1 L2
ENSG00000112303 VNN2 712611 sc-eQTL 6.03e-01 0.043 0.0827 0.338 B_Naive1 L2
ENSG00000112306 RPS12 661501 sc-eQTL 3.30e-01 0.0459 0.047 0.338 B_Naive1 L2
ENSG00000118515 SGK1 -842042 sc-eQTL 3.16e-01 -0.0739 0.0735 0.338 B_Naive1 L2
ENSG00000146409 SLC18B1 662731 sc-eQTL 8.93e-01 -0.0122 0.0909 0.338 B_Naive1 L2
ENSG00000028839 TBPL1 -476100 sc-eQTL 5.14e-01 0.0612 0.0936 0.339 B_Naive2 L2
ENSG00000079950 STX7 962872 sc-eQTL 8.25e-01 -0.011 0.0497 0.339 B_Naive2 L2
ENSG00000112303 VNN2 712611 sc-eQTL 9.80e-01 0.00227 0.0913 0.339 B_Naive2 L2
ENSG00000112306 RPS12 661501 sc-eQTL 4.14e-01 0.0396 0.0483 0.339 B_Naive2 L2
ENSG00000118515 SGK1 -842042 sc-eQTL 7.46e-02 0.152 0.0848 0.339 B_Naive2 L2
ENSG00000146409 SLC18B1 662731 sc-eQTL 4.97e-01 -0.0627 0.0922 0.339 B_Naive2 L2
ENSG00000028839 TBPL1 -476100 sc-eQTL 2.95e-01 -0.0971 0.0926 0.341 CD4_CTL L2
ENSG00000079950 STX7 962872 sc-eQTL 4.17e-01 -0.0749 0.092 0.341 CD4_CTL L2
ENSG00000112303 VNN2 712611 sc-eQTL 3.48e-01 0.0874 0.0928 0.341 CD4_CTL L2
ENSG00000112306 RPS12 661501 sc-eQTL 3.22e-01 0.0425 0.0429 0.341 CD4_CTL L2
ENSG00000118515 SGK1 -842042 sc-eQTL 3.99e-01 0.0628 0.0744 0.341 CD4_CTL L2
ENSG00000146409 SLC18B1 662731 sc-eQTL 9.81e-01 -0.00209 0.0866 0.341 CD4_CTL L2
ENSG00000028839 TBPL1 -476100 sc-eQTL 2.47e-01 -0.0862 0.0742 0.338 CD4_Naive L2
ENSG00000079950 STX7 962872 sc-eQTL 6.67e-01 -0.0314 0.0729 0.338 CD4_Naive L2
ENSG00000112303 VNN2 712611 sc-eQTL 8.04e-01 0.0168 0.0676 0.338 CD4_Naive L2
ENSG00000112306 RPS12 661501 sc-eQTL 4.97e-01 0.0298 0.0438 0.338 CD4_Naive L2
ENSG00000118515 SGK1 -842042 sc-eQTL 7.48e-01 0.0173 0.0537 0.338 CD4_Naive L2
ENSG00000146409 SLC18B1 662731 sc-eQTL 2.88e-01 -0.0897 0.0842 0.338 CD4_Naive L2
ENSG00000028839 TBPL1 -476100 sc-eQTL 4.19e-01 -0.0641 0.0793 0.338 CD4_TCM L2
ENSG00000079950 STX7 962872 sc-eQTL 9.83e-01 0.00168 0.08 0.338 CD4_TCM L2
ENSG00000112303 VNN2 712611 sc-eQTL 3.95e-01 0.067 0.0787 0.338 CD4_TCM L2
ENSG00000112306 RPS12 661501 sc-eQTL 1.67e-01 0.0564 0.0407 0.338 CD4_TCM L2
ENSG00000118515 SGK1 -842042 sc-eQTL 8.21e-01 0.013 0.0572 0.338 CD4_TCM L2
ENSG00000146409 SLC18B1 662731 sc-eQTL 3.03e-01 0.0974 0.0944 0.338 CD4_TCM L2
ENSG00000028839 TBPL1 -476100 sc-eQTL 9.88e-01 0.00139 0.0916 0.338 CD4_TEM L2
ENSG00000079950 STX7 962872 sc-eQTL 6.51e-01 -0.0415 0.0917 0.338 CD4_TEM L2
ENSG00000112303 VNN2 712611 sc-eQTL 2.32e-01 -0.105 0.0877 0.338 CD4_TEM L2
ENSG00000112306 RPS12 661501 sc-eQTL 9.10e-02 0.0609 0.0359 0.338 CD4_TEM L2
ENSG00000118515 SGK1 -842042 sc-eQTL 7.69e-01 -0.0182 0.062 0.338 CD4_TEM L2
ENSG00000146409 SLC18B1 662731 sc-eQTL 6.47e-01 -0.0411 0.0897 0.338 CD4_TEM L2
ENSG00000028839 TBPL1 -476100 sc-eQTL 6.16e-01 -0.0415 0.0827 0.338 CD8_CTL L2
ENSG00000079950 STX7 962872 sc-eQTL 5.72e-01 0.0438 0.0773 0.338 CD8_CTL L2
ENSG00000112303 VNN2 712611 sc-eQTL 1.83e-01 0.117 0.0875 0.338 CD8_CTL L2
ENSG00000112306 RPS12 661501 sc-eQTL 1.98e-01 0.0605 0.0468 0.338 CD8_CTL L2
ENSG00000118515 SGK1 -842042 sc-eQTL 9.36e-01 0.0064 0.0794 0.338 CD8_CTL L2
ENSG00000146409 SLC18B1 662731 sc-eQTL 7.93e-01 -0.0239 0.0911 0.338 CD8_CTL L2
ENSG00000028839 TBPL1 -476100 sc-eQTL 8.28e-01 -0.0189 0.0869 0.338 CD8_Naive L2
ENSG00000079950 STX7 962872 sc-eQTL 2.39e-01 0.109 0.0923 0.338 CD8_Naive L2
ENSG00000112303 VNN2 712611 sc-eQTL 3.10e-01 0.0811 0.0797 0.338 CD8_Naive L2
ENSG00000112306 RPS12 661501 sc-eQTL 2.53e-01 0.0523 0.0456 0.338 CD8_Naive L2
ENSG00000118515 SGK1 -842042 sc-eQTL 3.00e-01 0.0595 0.0573 0.338 CD8_Naive L2
ENSG00000146409 SLC18B1 662731 sc-eQTL 3.43e-01 0.087 0.0916 0.338 CD8_Naive L2
ENSG00000028839 TBPL1 -476100 sc-eQTL 3.84e-01 0.0881 0.101 0.343 CD8_TCM L2
ENSG00000079950 STX7 962872 sc-eQTL 2.99e-01 -0.0971 0.0933 0.343 CD8_TCM L2
ENSG00000112303 VNN2 712611 sc-eQTL 4.42e-01 0.0715 0.0927 0.343 CD8_TCM L2
ENSG00000112306 RPS12 661501 sc-eQTL 7.03e-01 0.0173 0.0452 0.343 CD8_TCM L2
ENSG00000118515 SGK1 -842042 sc-eQTL 6.50e-01 0.0341 0.0749 0.343 CD8_TCM L2
ENSG00000146409 SLC18B1 662731 sc-eQTL 8.71e-01 -0.0162 0.0992 0.343 CD8_TCM L2
ENSG00000028839 TBPL1 -476100 sc-eQTL 7.16e-02 0.16 0.0881 0.338 CD8_TEM L2
ENSG00000079950 STX7 962872 sc-eQTL 3.18e-01 -0.0967 0.0967 0.338 CD8_TEM L2
ENSG00000112303 VNN2 712611 sc-eQTL 8.96e-01 0.0127 0.0964 0.338 CD8_TEM L2
ENSG00000112306 RPS12 661501 sc-eQTL 4.35e-01 0.0405 0.0518 0.338 CD8_TEM L2
ENSG00000118515 SGK1 -842042 sc-eQTL 1.67e-02 0.202 0.0837 0.338 CD8_TEM L2
ENSG00000146409 SLC18B1 662731 sc-eQTL 6.23e-01 -0.0482 0.098 0.338 CD8_TEM L2
ENSG00000028839 TBPL1 -476100 sc-eQTL 8.83e-02 -0.158 0.092 0.333 MAIT L2
ENSG00000079950 STX7 962872 sc-eQTL 3.29e-01 -0.086 0.0879 0.333 MAIT L2
ENSG00000112303 VNN2 712611 sc-eQTL 2.06e-01 -0.113 0.0892 0.333 MAIT L2
ENSG00000112306 RPS12 661501 sc-eQTL 1.49e-01 0.0634 0.0438 0.333 MAIT L2
ENSG00000118515 SGK1 -842042 sc-eQTL 4.02e-01 -0.0519 0.0619 0.333 MAIT L2
ENSG00000146409 SLC18B1 662731 sc-eQTL 5.15e-01 -0.0602 0.0923 0.333 MAIT L2
ENSG00000028839 TBPL1 -476100 sc-eQTL 4.11e-01 -0.0805 0.0978 0.347 NK_CD56bright L2
ENSG00000079950 STX7 962872 sc-eQTL 8.12e-02 0.158 0.0901 0.347 NK_CD56bright L2
ENSG00000112303 VNN2 712611 sc-eQTL 4.32e-01 0.0724 0.0921 0.347 NK_CD56bright L2
ENSG00000112306 RPS12 661501 sc-eQTL 4.37e-02 0.103 0.0509 0.347 NK_CD56bright L2
ENSG00000118515 SGK1 -842042 sc-eQTL 9.70e-03 -0.197 0.0755 0.347 NK_CD56bright L2
ENSG00000028839 TBPL1 -476100 sc-eQTL 6.76e-01 0.0338 0.0807 0.338 NK_CD56dim L2
ENSG00000079950 STX7 962872 sc-eQTL 8.55e-01 0.0135 0.0739 0.338 NK_CD56dim L2
ENSG00000112303 VNN2 712611 sc-eQTL 3.37e-01 0.0887 0.0922 0.338 NK_CD56dim L2
ENSG00000112306 RPS12 661501 sc-eQTL 5.58e-01 0.0215 0.0366 0.338 NK_CD56dim L2
ENSG00000118515 SGK1 -842042 sc-eQTL 9.22e-01 0.00794 0.0812 0.338 NK_CD56dim L2
ENSG00000028839 TBPL1 -476100 sc-eQTL 2.77e-01 -0.109 0.0995 0.347 NK_HLA L2
ENSG00000079950 STX7 962872 sc-eQTL 5.53e-01 0.0539 0.0908 0.347 NK_HLA L2
ENSG00000112303 VNN2 712611 sc-eQTL 1.31e-01 0.139 0.0914 0.347 NK_HLA L2
ENSG00000112306 RPS12 661501 sc-eQTL 4.47e-01 -0.0326 0.0428 0.347 NK_HLA L2
ENSG00000118515 SGK1 -842042 sc-eQTL 4.53e-01 0.0636 0.0846 0.347 NK_HLA L2
ENSG00000028839 TBPL1 -476100 sc-eQTL 8.71e-01 -0.0136 0.0833 0.338 NK_cytokine L2
ENSG00000079950 STX7 962872 sc-eQTL 3.82e-01 -0.0705 0.0805 0.338 NK_cytokine L2
ENSG00000112303 VNN2 712611 sc-eQTL 4.32e-01 -0.0712 0.0905 0.338 NK_cytokine L2
ENSG00000112306 RPS12 661501 sc-eQTL 9.21e-01 0.00488 0.0492 0.338 NK_cytokine L2
ENSG00000118515 SGK1 -842042 sc-eQTL 4.35e-01 0.064 0.0818 0.338 NK_cytokine L2
ENSG00000028839 TBPL1 -476100 sc-eQTL 3.20e-01 -0.11 0.111 0.293 PB L2
ENSG00000079950 STX7 962872 sc-eQTL 1.66e-01 0.109 0.0784 0.293 PB L2
ENSG00000112303 VNN2 712611 sc-eQTL 9.97e-01 0.000362 0.0966 0.293 PB L2
ENSG00000112306 RPS12 661501 sc-eQTL 4.94e-01 0.0376 0.0547 0.293 PB L2
ENSG00000118515 SGK1 -842042 sc-eQTL 3.59e-01 -0.0814 0.0883 0.293 PB L2
ENSG00000146409 SLC18B1 662731 sc-eQTL 5.48e-01 0.0619 0.103 0.293 PB L2
ENSG00000028839 TBPL1 -476100 sc-eQTL 8.62e-01 -0.0162 0.0936 0.339 Pro_T L2
ENSG00000079950 STX7 962872 sc-eQTL 5.24e-01 -0.0532 0.0835 0.339 Pro_T L2
ENSG00000112303 VNN2 712611 sc-eQTL 5.41e-01 0.0548 0.0895 0.339 Pro_T L2
ENSG00000112306 RPS12 661501 sc-eQTL 8.71e-02 0.0579 0.0337 0.339 Pro_T L2
ENSG00000118515 SGK1 -842042 sc-eQTL 4.69e-01 -0.0492 0.0679 0.339 Pro_T L2
ENSG00000146409 SLC18B1 662731 sc-eQTL 8.15e-01 -0.0206 0.0877 0.339 Pro_T L2
ENSG00000028839 TBPL1 -476100 sc-eQTL 7.72e-01 -0.0273 0.0938 0.338 Treg L2
ENSG00000079950 STX7 962872 sc-eQTL 8.84e-01 -0.013 0.0885 0.338 Treg L2
ENSG00000112303 VNN2 712611 sc-eQTL 5.51e-02 0.142 0.0738 0.338 Treg L2
ENSG00000112306 RPS12 661501 sc-eQTL 2.72e-01 0.0361 0.0328 0.338 Treg L2
ENSG00000118515 SGK1 -842042 sc-eQTL 6.56e-01 -0.031 0.0693 0.338 Treg L2
ENSG00000146409 SLC18B1 662731 sc-eQTL 7.23e-02 -0.167 0.0923 0.338 Treg L2
ENSG00000028839 TBPL1 -476100 sc-eQTL 6.51e-01 0.0456 0.101 0.346 cDC L2
ENSG00000079950 STX7 962872 sc-eQTL 6.84e-01 0.0322 0.079 0.346 cDC L2
ENSG00000093134 VNN3 741305 sc-eQTL 7.33e-01 0.0268 0.0785 0.346 cDC L2
ENSG00000112299 VNN1 762015 sc-eQTL 9.40e-01 -0.0069 0.0923 0.346 cDC L2
ENSG00000112303 VNN2 712611 sc-eQTL 5.61e-02 0.171 0.089 0.346 cDC L2
ENSG00000112306 RPS12 661501 sc-eQTL 3.33e-01 0.043 0.0443 0.346 cDC L2
ENSG00000118515 SGK1 -842042 sc-eQTL 3.18e-01 -0.0747 0.0746 0.346 cDC L2
ENSG00000146409 SLC18B1 662731 sc-eQTL 3.41e-01 -0.0837 0.0877 0.346 cDC L2
ENSG00000286438 AL591115.1 372942 sc-eQTL 3.20e-01 -0.0699 0.0701 0.346 cDC L2
ENSG00000286887 AL355881.1 -820231 sc-eQTL 1.01e-01 -0.142 0.0858 0.346 cDC L2
ENSG00000028839 TBPL1 -476100 sc-eQTL 5.46e-01 0.0462 0.0765 0.338 cMono_IL1B L2
ENSG00000079950 STX7 962872 sc-eQTL 9.74e-01 -0.00189 0.0581 0.338 cMono_IL1B L2
ENSG00000093134 VNN3 741305 sc-eQTL 6.61e-03 -0.221 0.0807 0.338 cMono_IL1B L2
ENSG00000112299 VNN1 762015 sc-eQTL 2.04e-01 -0.105 0.0825 0.338 cMono_IL1B L2
ENSG00000112303 VNN2 712611 sc-eQTL 9.90e-02 0.109 0.0658 0.338 cMono_IL1B L2
ENSG00000112306 RPS12 661501 sc-eQTL 7.77e-01 -0.0104 0.0368 0.338 cMono_IL1B L2
ENSG00000118515 SGK1 -842042 sc-eQTL 9.02e-01 0.0068 0.0549 0.338 cMono_IL1B L2
ENSG00000146409 SLC18B1 662731 sc-eQTL 5.51e-01 0.0423 0.0709 0.338 cMono_IL1B L2
ENSG00000286887 AL355881.1 -820231 sc-eQTL 1.29e-02 -0.183 0.0728 0.338 cMono_IL1B L2
ENSG00000028839 TBPL1 -476100 sc-eQTL 6.28e-02 -0.161 0.0861 0.338 cMono_S100A L2
ENSG00000079950 STX7 962872 sc-eQTL 2.16e-01 -0.0775 0.0625 0.338 cMono_S100A L2
ENSG00000093134 VNN3 741305 sc-eQTL 3.48e-01 -0.0735 0.0782 0.338 cMono_S100A L2
ENSG00000112299 VNN1 762015 sc-eQTL 2.60e-01 -0.0958 0.0848 0.338 cMono_S100A L2
ENSG00000112303 VNN2 712611 sc-eQTL 1.32e-02 0.137 0.0549 0.338 cMono_S100A L2
ENSG00000112306 RPS12 661501 sc-eQTL 1.95e-01 -0.0519 0.04 0.338 cMono_S100A L2
ENSG00000118515 SGK1 -842042 sc-eQTL 8.46e-01 -0.00893 0.0459 0.338 cMono_S100A L2
ENSG00000146409 SLC18B1 662731 sc-eQTL 1.02e-01 0.121 0.0738 0.338 cMono_S100A L2
ENSG00000286887 AL355881.1 -820231 sc-eQTL 7.16e-01 -0.0265 0.0726 0.338 cMono_S100A L2
ENSG00000028839 TBPL1 -476100 sc-eQTL 7.90e-01 0.034 0.127 0.339 gdT L2
ENSG00000079950 STX7 962872 sc-eQTL 2.66e-01 0.122 0.109 0.339 gdT L2
ENSG00000112303 VNN2 712611 sc-eQTL 3.98e-01 -0.102 0.121 0.339 gdT L2
ENSG00000112306 RPS12 661501 sc-eQTL 8.34e-01 0.00969 0.0462 0.339 gdT L2
ENSG00000118515 SGK1 -842042 sc-eQTL 9.97e-01 0.000326 0.0872 0.339 gdT L2
ENSG00000146409 SLC18B1 662731 sc-eQTL 5.36e-01 0.0739 0.119 0.339 gdT L2
ENSG00000028839 TBPL1 -476100 sc-eQTL 1.99e-01 -0.114 0.0881 0.338 intMono L2
ENSG00000079950 STX7 962872 sc-eQTL 1.27e-01 -0.129 0.084 0.338 intMono L2
ENSG00000093134 VNN3 741305 sc-eQTL 9.45e-01 0.00594 0.0853 0.338 intMono L2
ENSG00000112299 VNN1 762015 sc-eQTL 5.30e-01 -0.053 0.0842 0.338 intMono L2
ENSG00000112303 VNN2 712611 sc-eQTL 7.70e-02 0.151 0.085 0.338 intMono L2
ENSG00000112306 RPS12 661501 sc-eQTL 6.69e-01 0.016 0.0373 0.338 intMono L2
ENSG00000118515 SGK1 -842042 sc-eQTL 4.69e-01 -0.0454 0.0625 0.338 intMono L2
ENSG00000146409 SLC18B1 662731 sc-eQTL 4.75e-01 0.0648 0.0907 0.338 intMono L2
ENSG00000286887 AL355881.1 -820231 sc-eQTL 6.29e-02 -0.161 0.0861 0.338 intMono L2
ENSG00000028839 TBPL1 -476100 sc-eQTL 5.47e-01 -0.0561 0.0931 0.339 ncMono L2
ENSG00000079950 STX7 962872 sc-eQTL 9.47e-01 -0.00422 0.063 0.339 ncMono L2
ENSG00000093134 VNN3 741305 sc-eQTL 4.32e-01 -0.0699 0.0888 0.339 ncMono L2
ENSG00000112299 VNN1 762015 sc-eQTL 8.07e-01 -0.0215 0.0883 0.339 ncMono L2
ENSG00000112303 VNN2 712611 sc-eQTL 4.17e-01 0.0689 0.0847 0.339 ncMono L2
ENSG00000112306 RPS12 661501 sc-eQTL 9.27e-01 0.00391 0.0426 0.339 ncMono L2
ENSG00000118515 SGK1 -842042 sc-eQTL 1.28e-01 -0.0914 0.0599 0.339 ncMono L2
ENSG00000146409 SLC18B1 662731 sc-eQTL 1.04e-01 -0.122 0.0747 0.339 ncMono L2
ENSG00000286887 AL355881.1 -820231 sc-eQTL 2.80e-02 -0.174 0.0785 0.339 ncMono L2
ENSG00000028839 TBPL1 -476100 sc-eQTL 5.28e-01 -0.0736 0.116 0.347 pDC L2
ENSG00000079950 STX7 962872 sc-eQTL 6.72e-02 0.142 0.0768 0.347 pDC L2
ENSG00000093134 VNN3 741305 sc-eQTL 6.46e-01 0.0359 0.0781 0.347 pDC L2
ENSG00000112299 VNN1 762015 sc-eQTL 8.30e-02 0.137 0.0787 0.347 pDC L2
ENSG00000112303 VNN2 712611 sc-eQTL 8.65e-01 0.0161 0.0947 0.347 pDC L2
ENSG00000112306 RPS12 661501 sc-eQTL 7.88e-01 -0.0176 0.0652 0.347 pDC L2
ENSG00000118515 SGK1 -842042 sc-eQTL 3.60e-01 -0.0606 0.0661 0.347 pDC L2
ENSG00000146409 SLC18B1 662731 sc-eQTL 3.25e-01 -0.095 0.0962 0.347 pDC L2
ENSG00000286438 AL591115.1 372942 sc-eQTL 9.96e-01 0.000456 0.0923 0.347 pDC L2
ENSG00000286887 AL355881.1 -820231 sc-eQTL 9.83e-01 -0.0017 0.0819 0.347 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -476100 sc-eQTL 6.61e-01 -0.0409 0.0933 0.338 B_Memory LOneK1K
ENSG00000079950 STX7 962872 sc-eQTL 2.31e-01 -0.0616 0.0512 0.338 B_Memory LOneK1K
ENSG00000112303 VNN2 712611 sc-eQTL 7.78e-01 -0.0229 0.0812 0.338 B_Memory LOneK1K
ENSG00000112306 RPS12 661501 sc-eQTL 6.81e-01 0.0191 0.0463 0.338 B_Memory LOneK1K
ENSG00000118515 SGK1 -842042 sc-eQTL 2.68e-02 -0.159 0.0715 0.338 B_Memory LOneK1K
ENSG00000146409 SLC18B1 662731 sc-eQTL 5.48e-01 0.0511 0.0849 0.338 B_Memory LOneK1K
ENSG00000028839 TBPL1 -476100 sc-eQTL 7.80e-01 0.0246 0.0881 0.338 B_Naive LOneK1K
ENSG00000079950 STX7 962872 sc-eQTL 3.53e-01 -0.0369 0.0396 0.338 B_Naive LOneK1K
ENSG00000112303 VNN2 712611 sc-eQTL 4.90e-01 0.0532 0.077 0.338 B_Naive LOneK1K
ENSG00000112306 RPS12 661501 sc-eQTL 3.51e-01 0.0435 0.0466 0.338 B_Naive LOneK1K
ENSG00000118515 SGK1 -842042 sc-eQTL 9.54e-01 -0.00414 0.0722 0.338 B_Naive LOneK1K
ENSG00000146409 SLC18B1 662731 sc-eQTL 6.09e-01 -0.045 0.0879 0.338 B_Naive LOneK1K
ENSG00000028839 TBPL1 -476100 sc-eQTL 7.13e-01 -0.0256 0.0697 0.338 CD14_Mono LOneK1K
ENSG00000079950 STX7 962872 sc-eQTL 5.04e-01 -0.0324 0.0484 0.338 CD14_Mono LOneK1K
ENSG00000093134 VNN3 741305 sc-eQTL 1.98e-02 -0.183 0.078 0.338 CD14_Mono LOneK1K
ENSG00000112299 VNN1 762015 sc-eQTL 1.18e-01 -0.129 0.0819 0.338 CD14_Mono LOneK1K
ENSG00000112303 VNN2 712611 sc-eQTL 3.29e-02 0.116 0.0539 0.338 CD14_Mono LOneK1K
ENSG00000112306 RPS12 661501 sc-eQTL 3.75e-01 -0.0332 0.0373 0.338 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -842042 sc-eQTL 7.85e-01 0.0139 0.0509 0.338 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 662731 sc-eQTL 2.78e-01 0.0722 0.0663 0.338 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -820231 sc-eQTL 4.81e-02 -0.137 0.0691 0.338 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -476100 sc-eQTL 1.74e-01 -0.123 0.0899 0.338 CD16_Mono LOneK1K
ENSG00000079950 STX7 962872 sc-eQTL 4.52e-02 -0.119 0.059 0.338 CD16_Mono LOneK1K
ENSG00000093134 VNN3 741305 sc-eQTL 2.82e-01 -0.0942 0.0874 0.338 CD16_Mono LOneK1K
ENSG00000112299 VNN1 762015 sc-eQTL 5.03e-01 -0.0582 0.0868 0.338 CD16_Mono LOneK1K
ENSG00000112303 VNN2 712611 sc-eQTL 9.89e-02 0.135 0.0814 0.338 CD16_Mono LOneK1K
ENSG00000112306 RPS12 661501 sc-eQTL 7.38e-01 -0.0116 0.0347 0.338 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -842042 sc-eQTL 2.66e-01 -0.0585 0.0524 0.338 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 662731 sc-eQTL 7.96e-01 0.0218 0.0844 0.338 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -820231 sc-eQTL 8.22e-03 -0.2 0.075 0.338 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -476100 sc-eQTL 9.78e-01 0.00208 0.0741 0.338 NK_CD56dim LOneK1K
ENSG00000079950 STX7 962872 sc-eQTL 9.58e-01 0.00369 0.0696 0.338 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 712611 sc-eQTL 5.87e-01 0.0479 0.088 0.338 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 661501 sc-eQTL 7.56e-01 0.0112 0.0359 0.338 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -842042 sc-eQTL 3.50e-01 0.0694 0.0741 0.338 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000118515 SGK1 -842042 eQTL 0.0603 -0.0449 0.0239 0.00101 0.0 0.332

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000118515 SGK1 -842042 2.66e-07 1.01e-07 3.62e-08 1.79e-07 9.65e-08 9.3e-08 1.42e-07 5.49e-08 1.42e-07 4.38e-08 1.62e-07 8.03e-08 1.26e-07 6.21e-08 5.44e-08 8.01e-08 4.94e-08 1.1e-07 5.19e-08 3.88e-08 1.05e-07 1.3e-07 1.3e-07 4.54e-08 1.29e-07 1.15e-07 1.12e-07 8.7e-08 9.88e-08 1.09e-07 9.58e-08 4.1e-08 2.91e-08 8.82e-08 8.99e-08 3.96e-08 5.03e-08 9.65e-08 7.47e-08 3.18e-08 4.69e-08 1.36e-07 4.04e-08 1.95e-08 7.26e-08 1.7e-08 1.25e-07 4.14e-09 5.04e-08