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Genes within 1Mb (chr6:133475306:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -476864 sc-eQTL 7.84e-01 0.0326 0.119 0.835 B L1
ENSG00000079950 STX7 962108 sc-eQTL 9.73e-01 -0.00162 0.0475 0.835 B L1
ENSG00000112303 VNN2 711847 sc-eQTL 7.14e-01 -0.0327 0.0892 0.835 B L1
ENSG00000112306 RPS12 660737 sc-eQTL 4.74e-01 0.0386 0.0539 0.835 B L1
ENSG00000118515 SGK1 -842806 sc-eQTL 9.71e-01 0.00306 0.0832 0.835 B L1
ENSG00000146409 SLC18B1 661967 sc-eQTL 9.79e-01 0.00296 0.114 0.835 B L1
ENSG00000028839 TBPL1 -476864 sc-eQTL 2.21e-01 -0.107 0.0871 0.835 CD4T L1
ENSG00000079950 STX7 962108 sc-eQTL 1.84e-01 0.121 0.0905 0.835 CD4T L1
ENSG00000112303 VNN2 711847 sc-eQTL 1.79e-01 0.106 0.0784 0.835 CD4T L1
ENSG00000112306 RPS12 660737 sc-eQTL 6.54e-01 0.024 0.0535 0.835 CD4T L1
ENSG00000118515 SGK1 -842806 sc-eQTL 3.37e-01 0.0691 0.0718 0.835 CD4T L1
ENSG00000146409 SLC18B1 661967 sc-eQTL 7.44e-01 0.0354 0.108 0.835 CD4T L1
ENSG00000028839 TBPL1 -476864 sc-eQTL 2.88e-01 0.0911 0.0855 0.835 CD8T L1
ENSG00000079950 STX7 962108 sc-eQTL 3.79e-01 -0.0787 0.0894 0.835 CD8T L1
ENSG00000112303 VNN2 711847 sc-eQTL 8.03e-01 0.0261 0.105 0.835 CD8T L1
ENSG00000112306 RPS12 660737 sc-eQTL 4.37e-01 -0.0278 0.0357 0.835 CD8T L1
ENSG00000118515 SGK1 -842806 sc-eQTL 3.94e-01 0.0469 0.055 0.835 CD8T L1
ENSG00000146409 SLC18B1 661967 sc-eQTL 1.79e-01 -0.145 0.108 0.835 CD8T L1
ENSG00000028839 TBPL1 -476864 sc-eQTL 5.62e-01 0.077 0.133 0.838 DC L1
ENSG00000079950 STX7 962108 sc-eQTL 2.95e-01 -0.0863 0.0822 0.838 DC L1
ENSG00000093134 VNN3 740541 sc-eQTL 8.21e-01 -0.0231 0.102 0.838 DC L1
ENSG00000112299 VNN1 761251 sc-eQTL 1.33e-01 -0.166 0.11 0.838 DC L1
ENSG00000112303 VNN2 711847 sc-eQTL 3.89e-01 -0.102 0.118 0.838 DC L1
ENSG00000112306 RPS12 660737 sc-eQTL 3.66e-01 -0.0598 0.066 0.838 DC L1
ENSG00000118515 SGK1 -842806 sc-eQTL 3.81e-01 -0.0672 0.0766 0.838 DC L1
ENSG00000146409 SLC18B1 661967 sc-eQTL 5.63e-01 -0.0606 0.105 0.838 DC L1
ENSG00000286438 AL591115.1 372178 sc-eQTL 4.51e-01 0.0719 0.0952 0.838 DC L1
ENSG00000286887 AL355881.1 -820995 sc-eQTL 3.07e-01 0.121 0.119 0.838 DC L1
ENSG00000028839 TBPL1 -476864 sc-eQTL 7.68e-01 -0.0268 0.0909 0.835 Mono L1
ENSG00000079950 STX7 962108 sc-eQTL 3.17e-01 -0.0609 0.0607 0.835 Mono L1
ENSG00000093134 VNN3 740541 sc-eQTL 8.28e-04 -0.345 0.102 0.835 Mono L1
ENSG00000112299 VNN1 761251 sc-eQTL 8.79e-01 -0.0171 0.112 0.835 Mono L1
ENSG00000112303 VNN2 711847 sc-eQTL 3.59e-01 -0.0727 0.0792 0.835 Mono L1
ENSG00000112306 RPS12 660737 sc-eQTL 7.74e-01 0.0137 0.0475 0.835 Mono L1
ENSG00000118515 SGK1 -842806 sc-eQTL 1.51e-01 0.0962 0.0668 0.835 Mono L1
ENSG00000146409 SLC18B1 661967 sc-eQTL 2.52e-01 -0.108 0.0937 0.835 Mono L1
ENSG00000286887 AL355881.1 -820995 sc-eQTL 4.15e-01 0.0753 0.0923 0.835 Mono L1
ENSG00000028839 TBPL1 -476864 sc-eQTL 3.76e-01 0.0876 0.0988 0.835 NK L1
ENSG00000079950 STX7 962108 sc-eQTL 2.86e-01 -0.0976 0.0913 0.835 NK L1
ENSG00000112303 VNN2 711847 sc-eQTL 4.42e-01 0.0875 0.114 0.835 NK L1
ENSG00000112306 RPS12 660737 sc-eQTL 5.21e-01 0.0303 0.0471 0.835 NK L1
ENSG00000118515 SGK1 -842806 sc-eQTL 4.10e-01 0.0719 0.087 0.835 NK L1
ENSG00000028839 TBPL1 -476864 sc-eQTL 6.11e-01 -0.0582 0.114 0.835 Other_T L1
ENSG00000079950 STX7 962108 sc-eQTL 2.89e-01 -0.0952 0.0896 0.835 Other_T L1
ENSG00000112303 VNN2 711847 sc-eQTL 6.83e-02 -0.198 0.108 0.835 Other_T L1
ENSG00000112306 RPS12 660737 sc-eQTL 5.77e-01 0.024 0.0431 0.835 Other_T L1
ENSG00000118515 SGK1 -842806 sc-eQTL 1.40e-01 0.117 0.0789 0.835 Other_T L1
ENSG00000146409 SLC18B1 661967 sc-eQTL 3.53e-01 -0.11 0.118 0.835 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -476864 sc-eQTL 5.28e-01 0.0837 0.132 0.829 B_Activated L2
ENSG00000079950 STX7 962108 sc-eQTL 6.71e-01 -0.0483 0.113 0.829 B_Activated L2
ENSG00000112303 VNN2 711847 sc-eQTL 4.78e-01 -0.0858 0.121 0.829 B_Activated L2
ENSG00000112306 RPS12 660737 sc-eQTL 9.70e-01 -0.0024 0.0647 0.829 B_Activated L2
ENSG00000118515 SGK1 -842806 sc-eQTL 8.49e-01 0.0221 0.115 0.829 B_Activated L2
ENSG00000146409 SLC18B1 661967 sc-eQTL 2.10e-01 -0.142 0.113 0.829 B_Activated L2
ENSG00000028839 TBPL1 -476864 sc-eQTL 6.57e-01 0.0569 0.128 0.837 B_Intermediate L2
ENSG00000079950 STX7 962108 sc-eQTL 7.85e-01 -0.02 0.0734 0.837 B_Intermediate L2
ENSG00000112303 VNN2 711847 sc-eQTL 9.29e-01 -0.00988 0.111 0.837 B_Intermediate L2
ENSG00000112306 RPS12 660737 sc-eQTL 2.89e-01 0.0718 0.0675 0.837 B_Intermediate L2
ENSG00000118515 SGK1 -842806 sc-eQTL 7.77e-01 0.0332 0.117 0.837 B_Intermediate L2
ENSG00000146409 SLC18B1 661967 sc-eQTL 6.75e-01 0.0512 0.122 0.837 B_Intermediate L2
ENSG00000028839 TBPL1 -476864 sc-eQTL 8.32e-02 -0.214 0.123 0.834 B_Memory L2
ENSG00000079950 STX7 962108 sc-eQTL 2.95e-01 0.0937 0.0892 0.834 B_Memory L2
ENSG00000112303 VNN2 711847 sc-eQTL 2.13e-01 -0.146 0.117 0.834 B_Memory L2
ENSG00000112306 RPS12 660737 sc-eQTL 5.28e-01 -0.0356 0.0563 0.834 B_Memory L2
ENSG00000118515 SGK1 -842806 sc-eQTL 6.18e-01 -0.0516 0.103 0.834 B_Memory L2
ENSG00000146409 SLC18B1 661967 sc-eQTL 2.99e-01 0.122 0.117 0.834 B_Memory L2
ENSG00000028839 TBPL1 -476864 sc-eQTL 3.52e-01 -0.107 0.115 0.835 B_Naive1 L2
ENSG00000079950 STX7 962108 sc-eQTL 6.61e-01 0.0244 0.0555 0.835 B_Naive1 L2
ENSG00000112303 VNN2 711847 sc-eQTL 4.44e-01 0.0825 0.108 0.835 B_Naive1 L2
ENSG00000112306 RPS12 660737 sc-eQTL 7.63e-02 0.108 0.0609 0.835 B_Naive1 L2
ENSG00000118515 SGK1 -842806 sc-eQTL 6.86e-01 0.0389 0.096 0.835 B_Naive1 L2
ENSG00000146409 SLC18B1 661967 sc-eQTL 5.67e-01 -0.0678 0.118 0.835 B_Naive1 L2
ENSG00000028839 TBPL1 -476864 sc-eQTL 6.81e-01 -0.0508 0.123 0.835 B_Naive2 L2
ENSG00000079950 STX7 962108 sc-eQTL 9.83e-01 0.00138 0.0655 0.835 B_Naive2 L2
ENSG00000112303 VNN2 711847 sc-eQTL 2.78e-01 -0.131 0.12 0.835 B_Naive2 L2
ENSG00000112306 RPS12 660737 sc-eQTL 1.56e-01 0.0902 0.0634 0.835 B_Naive2 L2
ENSG00000118515 SGK1 -842806 sc-eQTL 5.43e-02 0.216 0.112 0.835 B_Naive2 L2
ENSG00000146409 SLC18B1 661967 sc-eQTL 5.29e-01 -0.0766 0.121 0.835 B_Naive2 L2
ENSG00000028839 TBPL1 -476864 sc-eQTL 7.22e-01 0.0423 0.119 0.836 CD4_CTL L2
ENSG00000079950 STX7 962108 sc-eQTL 9.25e-01 0.0111 0.118 0.836 CD4_CTL L2
ENSG00000112303 VNN2 711847 sc-eQTL 5.05e-01 -0.0795 0.119 0.836 CD4_CTL L2
ENSG00000112306 RPS12 660737 sc-eQTL 4.73e-01 0.0395 0.0549 0.836 CD4_CTL L2
ENSG00000118515 SGK1 -842806 sc-eQTL 1.71e-02 0.226 0.094 0.836 CD4_CTL L2
ENSG00000146409 SLC18B1 661967 sc-eQTL 4.38e-01 0.0861 0.111 0.836 CD4_CTL L2
ENSG00000028839 TBPL1 -476864 sc-eQTL 8.97e-02 -0.169 0.0992 0.835 CD4_Naive L2
ENSG00000079950 STX7 962108 sc-eQTL 8.83e-02 0.167 0.0973 0.835 CD4_Naive L2
ENSG00000112303 VNN2 711847 sc-eQTL 2.46e-01 0.105 0.0905 0.835 CD4_Naive L2
ENSG00000112306 RPS12 660737 sc-eQTL 4.90e-01 0.0407 0.0588 0.835 CD4_Naive L2
ENSG00000118515 SGK1 -842806 sc-eQTL 8.37e-02 0.124 0.0716 0.835 CD4_Naive L2
ENSG00000146409 SLC18B1 661967 sc-eQTL 5.93e-01 0.0606 0.113 0.835 CD4_Naive L2
ENSG00000028839 TBPL1 -476864 sc-eQTL 1.52e-01 -0.152 0.106 0.835 CD4_TCM L2
ENSG00000079950 STX7 962108 sc-eQTL 9.03e-01 0.0131 0.107 0.835 CD4_TCM L2
ENSG00000112303 VNN2 711847 sc-eQTL 5.44e-01 0.0642 0.106 0.835 CD4_TCM L2
ENSG00000112306 RPS12 660737 sc-eQTL 8.67e-01 0.00917 0.0548 0.835 CD4_TCM L2
ENSG00000118515 SGK1 -842806 sc-eQTL 7.37e-01 0.0258 0.0767 0.835 CD4_TCM L2
ENSG00000146409 SLC18B1 661967 sc-eQTL 4.17e-01 0.103 0.127 0.835 CD4_TCM L2
ENSG00000028839 TBPL1 -476864 sc-eQTL 1.54e-01 0.17 0.119 0.835 CD4_TEM L2
ENSG00000079950 STX7 962108 sc-eQTL 2.91e-01 0.126 0.119 0.835 CD4_TEM L2
ENSG00000112303 VNN2 711847 sc-eQTL 7.19e-01 -0.0414 0.115 0.835 CD4_TEM L2
ENSG00000112306 RPS12 660737 sc-eQTL 2.00e-01 0.0604 0.047 0.835 CD4_TEM L2
ENSG00000118515 SGK1 -842806 sc-eQTL 1.26e-01 0.124 0.0806 0.835 CD4_TEM L2
ENSG00000146409 SLC18B1 661967 sc-eQTL 7.50e-01 -0.0373 0.117 0.835 CD4_TEM L2
ENSG00000028839 TBPL1 -476864 sc-eQTL 8.08e-01 -0.0259 0.107 0.835 CD8_CTL L2
ENSG00000079950 STX7 962108 sc-eQTL 4.40e-01 -0.077 0.0995 0.835 CD8_CTL L2
ENSG00000112303 VNN2 711847 sc-eQTL 7.80e-01 -0.0317 0.113 0.835 CD8_CTL L2
ENSG00000112306 RPS12 660737 sc-eQTL 6.73e-01 0.0256 0.0606 0.835 CD8_CTL L2
ENSG00000118515 SGK1 -842806 sc-eQTL 1.72e-01 0.14 0.102 0.835 CD8_CTL L2
ENSG00000146409 SLC18B1 661967 sc-eQTL 2.87e-01 -0.125 0.117 0.835 CD8_CTL L2
ENSG00000028839 TBPL1 -476864 sc-eQTL 7.57e-02 0.198 0.111 0.835 CD8_Naive L2
ENSG00000079950 STX7 962108 sc-eQTL 6.46e-01 -0.0549 0.119 0.835 CD8_Naive L2
ENSG00000112303 VNN2 711847 sc-eQTL 4.23e-01 0.0824 0.103 0.835 CD8_Naive L2
ENSG00000112306 RPS12 660737 sc-eQTL 9.97e-01 -0.000185 0.0589 0.835 CD8_Naive L2
ENSG00000118515 SGK1 -842806 sc-eQTL 2.63e-01 0.0827 0.0737 0.835 CD8_Naive L2
ENSG00000146409 SLC18B1 661967 sc-eQTL 5.17e-01 -0.0766 0.118 0.835 CD8_Naive L2
ENSG00000028839 TBPL1 -476864 sc-eQTL 5.02e-01 0.0852 0.127 0.833 CD8_TCM L2
ENSG00000079950 STX7 962108 sc-eQTL 8.76e-01 0.0184 0.117 0.833 CD8_TCM L2
ENSG00000112303 VNN2 711847 sc-eQTL 1.91e-01 0.152 0.116 0.833 CD8_TCM L2
ENSG00000112306 RPS12 660737 sc-eQTL 7.12e-01 -0.021 0.0567 0.833 CD8_TCM L2
ENSG00000118515 SGK1 -842806 sc-eQTL 3.57e-03 0.271 0.0919 0.833 CD8_TCM L2
ENSG00000146409 SLC18B1 661967 sc-eQTL 7.78e-01 -0.0351 0.124 0.833 CD8_TCM L2
ENSG00000028839 TBPL1 -476864 sc-eQTL 5.45e-01 0.0718 0.118 0.847 CD8_TEM L2
ENSG00000079950 STX7 962108 sc-eQTL 8.18e-01 0.0299 0.129 0.847 CD8_TEM L2
ENSG00000112303 VNN2 711847 sc-eQTL 5.72e-01 0.0728 0.129 0.847 CD8_TEM L2
ENSG00000112306 RPS12 660737 sc-eQTL 2.45e-01 0.0804 0.069 0.847 CD8_TEM L2
ENSG00000118515 SGK1 -842806 sc-eQTL 2.60e-01 0.128 0.113 0.847 CD8_TEM L2
ENSG00000146409 SLC18B1 661967 sc-eQTL 9.57e-01 0.00714 0.131 0.847 CD8_TEM L2
ENSG00000028839 TBPL1 -476864 sc-eQTL 9.92e-01 0.0012 0.118 0.835 MAIT L2
ENSG00000079950 STX7 962108 sc-eQTL 9.83e-01 0.00244 0.112 0.835 MAIT L2
ENSG00000112303 VNN2 711847 sc-eQTL 5.38e-02 -0.22 0.113 0.835 MAIT L2
ENSG00000112306 RPS12 660737 sc-eQTL 7.93e-01 0.0148 0.0562 0.835 MAIT L2
ENSG00000118515 SGK1 -842806 sc-eQTL 3.59e-01 0.0726 0.0789 0.835 MAIT L2
ENSG00000146409 SLC18B1 661967 sc-eQTL 5.75e-01 -0.066 0.118 0.835 MAIT L2
ENSG00000028839 TBPL1 -476864 sc-eQTL 4.05e-01 -0.107 0.128 0.838 NK_CD56bright L2
ENSG00000079950 STX7 962108 sc-eQTL 3.06e-02 0.257 0.118 0.838 NK_CD56bright L2
ENSG00000112303 VNN2 711847 sc-eQTL 1.50e-01 0.174 0.12 0.838 NK_CD56bright L2
ENSG00000112306 RPS12 660737 sc-eQTL 6.77e-01 -0.0281 0.0674 0.838 NK_CD56bright L2
ENSG00000118515 SGK1 -842806 sc-eQTL 2.89e-01 -0.107 0.101 0.838 NK_CD56bright L2
ENSG00000028839 TBPL1 -476864 sc-eQTL 4.69e-02 0.21 0.105 0.834 NK_CD56dim L2
ENSG00000079950 STX7 962108 sc-eQTL 5.99e-02 -0.182 0.0964 0.834 NK_CD56dim L2
ENSG00000112303 VNN2 711847 sc-eQTL 7.79e-01 0.0341 0.122 0.834 NK_CD56dim L2
ENSG00000112306 RPS12 660737 sc-eQTL 6.96e-01 0.0189 0.0482 0.834 NK_CD56dim L2
ENSG00000118515 SGK1 -842806 sc-eQTL 2.42e-01 0.125 0.107 0.834 NK_CD56dim L2
ENSG00000028839 TBPL1 -476864 sc-eQTL 6.00e-01 -0.0713 0.136 0.842 NK_HLA L2
ENSG00000079950 STX7 962108 sc-eQTL 8.18e-01 0.0285 0.124 0.842 NK_HLA L2
ENSG00000112303 VNN2 711847 sc-eQTL 4.31e-01 0.0986 0.125 0.842 NK_HLA L2
ENSG00000112306 RPS12 660737 sc-eQTL 6.96e-01 0.0228 0.0583 0.842 NK_HLA L2
ENSG00000118515 SGK1 -842806 sc-eQTL 7.10e-01 -0.043 0.115 0.842 NK_HLA L2
ENSG00000028839 TBPL1 -476864 sc-eQTL 7.44e-01 0.0352 0.108 0.834 NK_cytokine L2
ENSG00000079950 STX7 962108 sc-eQTL 7.45e-01 0.034 0.104 0.834 NK_cytokine L2
ENSG00000112303 VNN2 711847 sc-eQTL 5.93e-01 0.0629 0.117 0.834 NK_cytokine L2
ENSG00000112306 RPS12 660737 sc-eQTL 9.21e-01 0.0063 0.0637 0.834 NK_cytokine L2
ENSG00000118515 SGK1 -842806 sc-eQTL 1.57e-01 0.15 0.106 0.834 NK_cytokine L2
ENSG00000028839 TBPL1 -476864 sc-eQTL 7.47e-01 0.0426 0.132 0.8 PB L2
ENSG00000079950 STX7 962108 sc-eQTL 3.51e-01 0.0875 0.0935 0.8 PB L2
ENSG00000112303 VNN2 711847 sc-eQTL 2.47e-01 -0.133 0.114 0.8 PB L2
ENSG00000112306 RPS12 660737 sc-eQTL 9.47e-01 -0.00434 0.0651 0.8 PB L2
ENSG00000118515 SGK1 -842806 sc-eQTL 3.24e-01 0.104 0.105 0.8 PB L2
ENSG00000146409 SLC18B1 661967 sc-eQTL 7.71e-02 0.215 0.12 0.8 PB L2
ENSG00000028839 TBPL1 -476864 sc-eQTL 1.18e-01 -0.184 0.117 0.837 Pro_T L2
ENSG00000079950 STX7 962108 sc-eQTL 7.64e-01 0.0316 0.105 0.837 Pro_T L2
ENSG00000112303 VNN2 711847 sc-eQTL 4.57e-01 -0.0842 0.113 0.837 Pro_T L2
ENSG00000112306 RPS12 660737 sc-eQTL 2.13e-01 0.0532 0.0426 0.837 Pro_T L2
ENSG00000118515 SGK1 -842806 sc-eQTL 7.20e-01 -0.0308 0.0858 0.837 Pro_T L2
ENSG00000146409 SLC18B1 661967 sc-eQTL 8.84e-01 0.0162 0.111 0.837 Pro_T L2
ENSG00000028839 TBPL1 -476864 sc-eQTL 9.02e-01 0.0151 0.123 0.835 Treg L2
ENSG00000079950 STX7 962108 sc-eQTL 1.79e-02 0.273 0.114 0.835 Treg L2
ENSG00000112303 VNN2 711847 sc-eQTL 4.34e-01 0.0765 0.0975 0.835 Treg L2
ENSG00000112306 RPS12 660737 sc-eQTL 3.00e-01 0.0448 0.0431 0.835 Treg L2
ENSG00000118515 SGK1 -842806 sc-eQTL 2.46e-01 -0.106 0.0907 0.835 Treg L2
ENSG00000146409 SLC18B1 661967 sc-eQTL 1.63e-01 -0.17 0.121 0.835 Treg L2
ENSG00000028839 TBPL1 -476864 sc-eQTL 3.80e-01 0.121 0.137 0.854 cDC L2
ENSG00000079950 STX7 962108 sc-eQTL 6.30e-01 0.0522 0.108 0.854 cDC L2
ENSG00000093134 VNN3 740541 sc-eQTL 9.55e-01 0.00612 0.107 0.854 cDC L2
ENSG00000112299 VNN1 761251 sc-eQTL 3.21e-01 -0.125 0.126 0.854 cDC L2
ENSG00000112303 VNN2 711847 sc-eQTL 8.60e-01 -0.0217 0.123 0.854 cDC L2
ENSG00000112306 RPS12 660737 sc-eQTL 4.90e-01 -0.042 0.0607 0.854 cDC L2
ENSG00000118515 SGK1 -842806 sc-eQTL 7.61e-01 0.0311 0.102 0.854 cDC L2
ENSG00000146409 SLC18B1 661967 sc-eQTL 4.75e-01 -0.086 0.12 0.854 cDC L2
ENSG00000286438 AL591115.1 372178 sc-eQTL 6.47e-01 -0.044 0.0961 0.854 cDC L2
ENSG00000286887 AL355881.1 -820995 sc-eQTL 1.40e-01 0.175 0.118 0.854 cDC L2
ENSG00000028839 TBPL1 -476864 sc-eQTL 9.24e-01 0.00985 0.103 0.835 cMono_IL1B L2
ENSG00000079950 STX7 962108 sc-eQTL 1.64e-01 -0.108 0.0777 0.835 cMono_IL1B L2
ENSG00000093134 VNN3 740541 sc-eQTL 2.44e-03 -0.331 0.108 0.835 cMono_IL1B L2
ENSG00000112299 VNN1 761251 sc-eQTL 6.83e-01 0.0455 0.111 0.835 cMono_IL1B L2
ENSG00000112303 VNN2 711847 sc-eQTL 3.79e-01 -0.0783 0.0888 0.835 cMono_IL1B L2
ENSG00000112306 RPS12 660737 sc-eQTL 8.05e-01 0.0122 0.0494 0.835 cMono_IL1B L2
ENSG00000118515 SGK1 -842806 sc-eQTL 3.46e-01 0.0695 0.0735 0.835 cMono_IL1B L2
ENSG00000146409 SLC18B1 661967 sc-eQTL 4.44e-01 -0.0731 0.0952 0.835 cMono_IL1B L2
ENSG00000286887 AL355881.1 -820995 sc-eQTL 4.22e-01 0.0798 0.0991 0.835 cMono_IL1B L2
ENSG00000028839 TBPL1 -476864 sc-eQTL 2.36e-01 -0.138 0.116 0.835 cMono_S100A L2
ENSG00000079950 STX7 962108 sc-eQTL 9.08e-01 0.00977 0.0844 0.835 cMono_S100A L2
ENSG00000093134 VNN3 740541 sc-eQTL 5.58e-03 -0.29 0.103 0.835 cMono_S100A L2
ENSG00000112299 VNN1 761251 sc-eQTL 6.16e-01 -0.0574 0.114 0.835 cMono_S100A L2
ENSG00000112303 VNN2 711847 sc-eQTL 2.28e-01 -0.0903 0.0747 0.835 cMono_S100A L2
ENSG00000112306 RPS12 660737 sc-eQTL 9.76e-01 0.00163 0.054 0.835 cMono_S100A L2
ENSG00000118515 SGK1 -842806 sc-eQTL 6.02e-02 0.116 0.0612 0.835 cMono_S100A L2
ENSG00000146409 SLC18B1 661967 sc-eQTL 6.88e-02 -0.181 0.0991 0.835 cMono_S100A L2
ENSG00000286887 AL355881.1 -820995 sc-eQTL 9.43e-01 0.00701 0.0977 0.835 cMono_S100A L2
ENSG00000028839 TBPL1 -476864 sc-eQTL 3.61e-01 0.15 0.163 0.845 gdT L2
ENSG00000079950 STX7 962108 sc-eQTL 4.01e-01 -0.118 0.14 0.845 gdT L2
ENSG00000112303 VNN2 711847 sc-eQTL 5.32e-01 -0.0975 0.156 0.845 gdT L2
ENSG00000112306 RPS12 660737 sc-eQTL 7.74e-01 -0.0171 0.0593 0.845 gdT L2
ENSG00000118515 SGK1 -842806 sc-eQTL 7.31e-03 0.297 0.109 0.845 gdT L2
ENSG00000146409 SLC18B1 661967 sc-eQTL 3.03e-01 -0.158 0.153 0.845 gdT L2
ENSG00000028839 TBPL1 -476864 sc-eQTL 7.28e-01 0.0414 0.119 0.833 intMono L2
ENSG00000079950 STX7 962108 sc-eQTL 2.18e-01 -0.14 0.113 0.833 intMono L2
ENSG00000093134 VNN3 740541 sc-eQTL 2.35e-01 -0.136 0.114 0.833 intMono L2
ENSG00000112299 VNN1 761251 sc-eQTL 9.91e-01 -0.00133 0.114 0.833 intMono L2
ENSG00000112303 VNN2 711847 sc-eQTL 7.62e-03 0.306 0.113 0.833 intMono L2
ENSG00000112306 RPS12 660737 sc-eQTL 8.51e-01 -0.00945 0.0502 0.833 intMono L2
ENSG00000118515 SGK1 -842806 sc-eQTL 5.94e-01 0.045 0.0843 0.833 intMono L2
ENSG00000146409 SLC18B1 661967 sc-eQTL 4.62e-02 0.243 0.121 0.833 intMono L2
ENSG00000286887 AL355881.1 -820995 sc-eQTL 9.77e-01 0.00331 0.117 0.833 intMono L2
ENSG00000028839 TBPL1 -476864 sc-eQTL 8.83e-01 0.0185 0.125 0.844 ncMono L2
ENSG00000079950 STX7 962108 sc-eQTL 8.88e-01 0.0119 0.0848 0.844 ncMono L2
ENSG00000093134 VNN3 740541 sc-eQTL 3.43e-02 -0.252 0.118 0.844 ncMono L2
ENSG00000112299 VNN1 761251 sc-eQTL 7.12e-01 0.044 0.119 0.844 ncMono L2
ENSG00000112303 VNN2 711847 sc-eQTL 4.70e-01 0.0826 0.114 0.844 ncMono L2
ENSG00000112306 RPS12 660737 sc-eQTL 6.26e-01 0.028 0.0572 0.844 ncMono L2
ENSG00000118515 SGK1 -842806 sc-eQTL 3.30e-01 0.079 0.0808 0.844 ncMono L2
ENSG00000146409 SLC18B1 661967 sc-eQTL 1.83e-01 -0.135 0.101 0.844 ncMono L2
ENSG00000286887 AL355881.1 -820995 sc-eQTL 8.99e-01 0.0135 0.107 0.844 ncMono L2
ENSG00000028839 TBPL1 -476864 sc-eQTL 6.29e-01 -0.0734 0.152 0.839 pDC L2
ENSG00000079950 STX7 962108 sc-eQTL 1.40e-01 -0.149 0.1 0.839 pDC L2
ENSG00000093134 VNN3 740541 sc-eQTL 5.45e-01 -0.0617 0.102 0.839 pDC L2
ENSG00000112299 VNN1 761251 sc-eQTL 1.18e-01 -0.161 0.103 0.839 pDC L2
ENSG00000112303 VNN2 711847 sc-eQTL 1.51e-01 -0.177 0.122 0.839 pDC L2
ENSG00000112306 RPS12 660737 sc-eQTL 8.62e-01 -0.0147 0.0848 0.839 pDC L2
ENSG00000118515 SGK1 -842806 sc-eQTL 3.76e-01 -0.0764 0.086 0.839 pDC L2
ENSG00000146409 SLC18B1 661967 sc-eQTL 8.20e-01 0.0286 0.126 0.839 pDC L2
ENSG00000286438 AL591115.1 372178 sc-eQTL 1.43e-01 0.176 0.119 0.839 pDC L2
ENSG00000286887 AL355881.1 -820995 sc-eQTL 7.50e-01 0.0339 0.107 0.839 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -476864 sc-eQTL 3.42e-01 0.117 0.123 0.835 B_Memory LOneK1K
ENSG00000079950 STX7 962108 sc-eQTL 8.02e-01 -0.0171 0.0678 0.835 B_Memory LOneK1K
ENSG00000112303 VNN2 711847 sc-eQTL 4.97e-01 -0.0728 0.107 0.835 B_Memory LOneK1K
ENSG00000112306 RPS12 660737 sc-eQTL 2.39e-01 0.0719 0.0609 0.835 B_Memory LOneK1K
ENSG00000118515 SGK1 -842806 sc-eQTL 7.02e-01 0.0366 0.0955 0.835 B_Memory LOneK1K
ENSG00000146409 SLC18B1 661967 sc-eQTL 4.68e-01 0.0815 0.112 0.835 B_Memory LOneK1K
ENSG00000028839 TBPL1 -476864 sc-eQTL 6.76e-01 -0.0481 0.115 0.835 B_Naive LOneK1K
ENSG00000079950 STX7 962108 sc-eQTL 4.81e-01 0.0365 0.0518 0.835 B_Naive LOneK1K
ENSG00000112303 VNN2 711847 sc-eQTL 9.37e-01 -0.00802 0.101 0.835 B_Naive LOneK1K
ENSG00000112306 RPS12 660737 sc-eQTL 6.08e-02 0.114 0.0604 0.835 B_Naive LOneK1K
ENSG00000118515 SGK1 -842806 sc-eQTL 1.93e-01 0.122 0.0939 0.835 B_Naive LOneK1K
ENSG00000146409 SLC18B1 661967 sc-eQTL 6.04e-01 -0.0596 0.115 0.835 B_Naive LOneK1K
ENSG00000028839 TBPL1 -476864 sc-eQTL 7.52e-01 -0.0298 0.0941 0.835 CD14_Mono LOneK1K
ENSG00000079950 STX7 962108 sc-eQTL 4.04e-01 -0.0547 0.0654 0.835 CD14_Mono LOneK1K
ENSG00000093134 VNN3 740541 sc-eQTL 2.27e-03 -0.323 0.104 0.835 CD14_Mono LOneK1K
ENSG00000112299 VNN1 761251 sc-eQTL 9.83e-01 0.00237 0.111 0.835 CD14_Mono LOneK1K
ENSG00000112303 VNN2 711847 sc-eQTL 4.72e-01 -0.053 0.0735 0.835 CD14_Mono LOneK1K
ENSG00000112306 RPS12 660737 sc-eQTL 9.52e-01 -0.00305 0.0505 0.835 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -842806 sc-eQTL 1.75e-01 0.0933 0.0685 0.835 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 661967 sc-eQTL 1.12e-01 -0.142 0.0893 0.835 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -820995 sc-eQTL 6.27e-01 0.0458 0.0941 0.835 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -476864 sc-eQTL 9.61e-01 -0.00593 0.121 0.836 CD16_Mono LOneK1K
ENSG00000079950 STX7 962108 sc-eQTL 2.24e-01 -0.097 0.0796 0.836 CD16_Mono LOneK1K
ENSG00000093134 VNN3 740541 sc-eQTL 2.01e-03 -0.359 0.115 0.836 CD16_Mono LOneK1K
ENSG00000112299 VNN1 761251 sc-eQTL 8.27e-01 0.0255 0.116 0.836 CD16_Mono LOneK1K
ENSG00000112303 VNN2 711847 sc-eQTL 8.24e-02 0.19 0.109 0.836 CD16_Mono LOneK1K
ENSG00000112306 RPS12 660737 sc-eQTL 6.34e-01 -0.0222 0.0466 0.836 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -842806 sc-eQTL 4.01e-01 0.0593 0.0704 0.836 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 661967 sc-eQTL 1.44e-01 0.165 0.113 0.836 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -820995 sc-eQTL 6.70e-01 0.0436 0.102 0.836 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -476864 sc-eQTL 1.11e-01 0.155 0.0969 0.834 NK_CD56dim LOneK1K
ENSG00000079950 STX7 962108 sc-eQTL 2.06e-01 -0.116 0.0912 0.834 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 711847 sc-eQTL 8.31e-01 0.0247 0.116 0.834 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 660737 sc-eQTL 6.18e-01 0.0236 0.0473 0.834 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -842806 sc-eQTL 1.57e-02 0.235 0.0964 0.834 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079950 STX7 962108 eQTL 0.044 0.0449 0.0223 0.0 0.0 0.146
ENSG00000093134 VNN3 740541 eQTL 0.0275 -0.0452 0.0205 0.0 0.0 0.146

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000093134 VNN3 740541 2.67e-07 1.27e-07 5.49e-08 1.9e-07 1.01e-07 9.05e-08 1.6e-07 5.43e-08 1.45e-07 6.08e-08 1.55e-07 1.01e-07 1.53e-07 7.37e-08 6.25e-08 7.5e-08 4.01e-08 1.33e-07 6.32e-08 4.8e-08 1.25e-07 1.24e-07 1.45e-07 2.64e-08 1.55e-07 1.25e-07 1.13e-07 1.04e-07 1.23e-07 1.07e-07 9.92e-08 3.6e-08 3.59e-08 8.56e-08 4.84e-08 2.69e-08 5.42e-08 8.37e-08 6.57e-08 4.19e-08 6e-08 1.46e-07 5.39e-08 1.1e-08 2.64e-08 1.8e-08 9.29e-08 2.07e-09 4.8e-08