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Genes within 1Mb (chr6:133469355:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -482815 sc-eQTL 7.98e-01 0.03 0.117 0.831 B L1
ENSG00000079950 STX7 956157 sc-eQTL 8.56e-01 0.00846 0.0467 0.831 B L1
ENSG00000112303 VNN2 705896 sc-eQTL 8.63e-01 -0.0151 0.0878 0.831 B L1
ENSG00000112306 RPS12 654786 sc-eQTL 7.17e-01 0.0192 0.053 0.831 B L1
ENSG00000118515 SGK1 -848757 sc-eQTL 8.77e-01 0.0127 0.0818 0.831 B L1
ENSG00000146409 SLC18B1 656016 sc-eQTL 8.30e-01 -0.0241 0.112 0.831 B L1
ENSG00000028839 TBPL1 -482815 sc-eQTL 1.59e-01 -0.122 0.0865 0.831 CD4T L1
ENSG00000079950 STX7 956157 sc-eQTL 1.05e-01 0.146 0.0898 0.831 CD4T L1
ENSG00000112303 VNN2 705896 sc-eQTL 2.25e-01 0.0949 0.078 0.831 CD4T L1
ENSG00000112306 RPS12 654786 sc-eQTL 9.05e-01 0.00636 0.0532 0.831 CD4T L1
ENSG00000118515 SGK1 -848757 sc-eQTL 4.04e-01 0.0597 0.0714 0.831 CD4T L1
ENSG00000146409 SLC18B1 656016 sc-eQTL 1.00e+00 4.38e-05 0.108 0.831 CD4T L1
ENSG00000028839 TBPL1 -482815 sc-eQTL 3.80e-01 0.0744 0.0846 0.831 CD8T L1
ENSG00000079950 STX7 956157 sc-eQTL 4.41e-01 -0.0682 0.0883 0.831 CD8T L1
ENSG00000112303 VNN2 705896 sc-eQTL 7.53e-01 0.0325 0.103 0.831 CD8T L1
ENSG00000112306 RPS12 654786 sc-eQTL 3.14e-01 -0.0355 0.0352 0.831 CD8T L1
ENSG00000118515 SGK1 -848757 sc-eQTL 4.42e-01 0.0418 0.0543 0.831 CD8T L1
ENSG00000146409 SLC18B1 656016 sc-eQTL 1.38e-01 -0.158 0.106 0.831 CD8T L1
ENSG00000028839 TBPL1 -482815 sc-eQTL 5.79e-01 0.0731 0.131 0.833 DC L1
ENSG00000079950 STX7 956157 sc-eQTL 3.97e-01 -0.0693 0.0816 0.833 DC L1
ENSG00000093134 VNN3 734590 sc-eQTL 7.14e-01 -0.0372 0.101 0.833 DC L1
ENSG00000112299 VNN1 755300 sc-eQTL 1.62e-01 -0.153 0.109 0.833 DC L1
ENSG00000112303 VNN2 705896 sc-eQTL 4.60e-01 -0.0865 0.117 0.833 DC L1
ENSG00000112306 RPS12 654786 sc-eQTL 2.82e-01 -0.0706 0.0655 0.833 DC L1
ENSG00000118515 SGK1 -848757 sc-eQTL 5.34e-01 -0.0474 0.0761 0.833 DC L1
ENSG00000146409 SLC18B1 656016 sc-eQTL 5.39e-01 -0.064 0.104 0.833 DC L1
ENSG00000286438 AL591115.1 366227 sc-eQTL 4.65e-01 0.0691 0.0944 0.833 DC L1
ENSG00000286887 AL355881.1 -826946 sc-eQTL 4.03e-01 0.0985 0.118 0.833 DC L1
ENSG00000028839 TBPL1 -482815 sc-eQTL 7.61e-01 -0.0274 0.0898 0.831 Mono L1
ENSG00000079950 STX7 956157 sc-eQTL 5.84e-01 -0.0329 0.0601 0.831 Mono L1
ENSG00000093134 VNN3 734590 sc-eQTL 1.01e-03 -0.335 0.101 0.831 Mono L1
ENSG00000112299 VNN1 755300 sc-eQTL 7.93e-01 -0.0291 0.111 0.831 Mono L1
ENSG00000112303 VNN2 705896 sc-eQTL 2.33e-01 -0.0933 0.0781 0.831 Mono L1
ENSG00000112306 RPS12 654786 sc-eQTL 7.94e-01 0.0123 0.0469 0.831 Mono L1
ENSG00000118515 SGK1 -848757 sc-eQTL 1.31e-01 0.0998 0.0659 0.831 Mono L1
ENSG00000146409 SLC18B1 656016 sc-eQTL 1.91e-01 -0.121 0.0925 0.831 Mono L1
ENSG00000286887 AL355881.1 -826946 sc-eQTL 4.98e-01 0.0619 0.0912 0.831 Mono L1
ENSG00000028839 TBPL1 -482815 sc-eQTL 3.56e-01 0.0902 0.0974 0.83 NK L1
ENSG00000079950 STX7 956157 sc-eQTL 4.23e-01 -0.0723 0.0902 0.83 NK L1
ENSG00000112303 VNN2 705896 sc-eQTL 3.80e-01 0.0986 0.112 0.83 NK L1
ENSG00000112306 RPS12 654786 sc-eQTL 8.52e-01 0.00868 0.0465 0.83 NK L1
ENSG00000118515 SGK1 -848757 sc-eQTL 3.97e-01 0.0729 0.0858 0.83 NK L1
ENSG00000028839 TBPL1 -482815 sc-eQTL 7.08e-01 -0.0421 0.112 0.831 Other_T L1
ENSG00000079950 STX7 956157 sc-eQTL 3.77e-01 -0.078 0.0882 0.831 Other_T L1
ENSG00000112303 VNN2 705896 sc-eQTL 5.11e-02 -0.208 0.106 0.831 Other_T L1
ENSG00000112306 RPS12 654786 sc-eQTL 7.67e-01 0.0126 0.0423 0.831 Other_T L1
ENSG00000118515 SGK1 -848757 sc-eQTL 1.49e-01 0.112 0.0776 0.831 Other_T L1
ENSG00000146409 SLC18B1 656016 sc-eQTL 3.65e-01 -0.105 0.116 0.831 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -482815 sc-eQTL 6.17e-01 0.0651 0.13 0.827 B_Activated L2
ENSG00000079950 STX7 956157 sc-eQTL 7.30e-01 -0.0385 0.111 0.827 B_Activated L2
ENSG00000112303 VNN2 705896 sc-eQTL 4.63e-01 -0.087 0.118 0.827 B_Activated L2
ENSG00000112306 RPS12 654786 sc-eQTL 9.30e-01 -0.00555 0.0635 0.827 B_Activated L2
ENSG00000118515 SGK1 -848757 sc-eQTL 7.72e-01 0.0329 0.113 0.827 B_Activated L2
ENSG00000146409 SLC18B1 656016 sc-eQTL 1.59e-01 -0.156 0.111 0.827 B_Activated L2
ENSG00000028839 TBPL1 -482815 sc-eQTL 4.18e-01 0.102 0.126 0.833 B_Intermediate L2
ENSG00000079950 STX7 956157 sc-eQTL 8.67e-01 -0.0121 0.0724 0.833 B_Intermediate L2
ENSG00000112303 VNN2 705896 sc-eQTL 8.87e-01 -0.0155 0.109 0.833 B_Intermediate L2
ENSG00000112306 RPS12 654786 sc-eQTL 4.94e-01 0.0457 0.0667 0.833 B_Intermediate L2
ENSG00000118515 SGK1 -848757 sc-eQTL 7.66e-01 0.0344 0.115 0.833 B_Intermediate L2
ENSG00000146409 SLC18B1 656016 sc-eQTL 7.45e-01 0.0392 0.12 0.833 B_Intermediate L2
ENSG00000028839 TBPL1 -482815 sc-eQTL 9.79e-02 -0.201 0.121 0.83 B_Memory L2
ENSG00000079950 STX7 956157 sc-eQTL 1.64e-01 0.123 0.0878 0.83 B_Memory L2
ENSG00000112303 VNN2 705896 sc-eQTL 2.27e-01 -0.139 0.115 0.83 B_Memory L2
ENSG00000112306 RPS12 654786 sc-eQTL 3.32e-01 -0.0539 0.0555 0.83 B_Memory L2
ENSG00000118515 SGK1 -848757 sc-eQTL 6.35e-01 -0.0484 0.102 0.83 B_Memory L2
ENSG00000146409 SLC18B1 656016 sc-eQTL 2.71e-01 0.128 0.116 0.83 B_Memory L2
ENSG00000028839 TBPL1 -482815 sc-eQTL 3.23e-01 -0.113 0.114 0.831 B_Naive1 L2
ENSG00000079950 STX7 956157 sc-eQTL 5.11e-01 0.036 0.0546 0.831 B_Naive1 L2
ENSG00000112303 VNN2 705896 sc-eQTL 3.47e-01 0.0999 0.106 0.831 B_Naive1 L2
ENSG00000112306 RPS12 654786 sc-eQTL 1.70e-01 0.083 0.0602 0.831 B_Naive1 L2
ENSG00000118515 SGK1 -848757 sc-eQTL 5.79e-01 0.0525 0.0946 0.831 B_Naive1 L2
ENSG00000146409 SLC18B1 656016 sc-eQTL 4.68e-01 -0.0847 0.117 0.831 B_Naive1 L2
ENSG00000028839 TBPL1 -482815 sc-eQTL 7.77e-01 -0.0346 0.122 0.83 B_Naive2 L2
ENSG00000079950 STX7 956157 sc-eQTL 9.02e-01 0.00801 0.0647 0.83 B_Naive2 L2
ENSG00000112303 VNN2 705896 sc-eQTL 3.51e-01 -0.111 0.119 0.83 B_Naive2 L2
ENSG00000112306 RPS12 654786 sc-eQTL 2.90e-01 0.0665 0.0627 0.83 B_Naive2 L2
ENSG00000118515 SGK1 -848757 sc-eQTL 3.62e-02 0.232 0.11 0.83 B_Naive2 L2
ENSG00000146409 SLC18B1 656016 sc-eQTL 3.70e-01 -0.108 0.12 0.83 B_Naive2 L2
ENSG00000028839 TBPL1 -482815 sc-eQTL 6.02e-01 0.0615 0.118 0.832 CD4_CTL L2
ENSG00000079950 STX7 956157 sc-eQTL 8.17e-01 0.0271 0.117 0.832 CD4_CTL L2
ENSG00000112303 VNN2 705896 sc-eQTL 4.77e-01 -0.084 0.118 0.832 CD4_CTL L2
ENSG00000112306 RPS12 654786 sc-eQTL 4.90e-01 0.0377 0.0545 0.832 CD4_CTL L2
ENSG00000118515 SGK1 -848757 sc-eQTL 1.70e-02 0.224 0.0932 0.832 CD4_CTL L2
ENSG00000146409 SLC18B1 656016 sc-eQTL 5.64e-01 0.0635 0.11 0.832 CD4_CTL L2
ENSG00000028839 TBPL1 -482815 sc-eQTL 6.27e-02 -0.184 0.0985 0.831 CD4_Naive L2
ENSG00000079950 STX7 956157 sc-eQTL 7.53e-02 0.173 0.0967 0.831 CD4_Naive L2
ENSG00000112303 VNN2 705896 sc-eQTL 4.06e-01 0.0751 0.0901 0.831 CD4_Naive L2
ENSG00000112306 RPS12 654786 sc-eQTL 6.86e-01 0.0237 0.0585 0.831 CD4_Naive L2
ENSG00000118515 SGK1 -848757 sc-eQTL 1.24e-01 0.11 0.0713 0.831 CD4_Naive L2
ENSG00000146409 SLC18B1 656016 sc-eQTL 8.12e-01 0.0268 0.113 0.831 CD4_Naive L2
ENSG00000028839 TBPL1 -482815 sc-eQTL 1.07e-01 -0.171 0.105 0.831 CD4_TCM L2
ENSG00000079950 STX7 956157 sc-eQTL 8.37e-01 0.022 0.107 0.831 CD4_TCM L2
ENSG00000112303 VNN2 705896 sc-eQTL 6.24e-01 0.0516 0.105 0.831 CD4_TCM L2
ENSG00000112306 RPS12 654786 sc-eQTL 9.01e-01 -0.00678 0.0545 0.831 CD4_TCM L2
ENSG00000118515 SGK1 -848757 sc-eQTL 7.82e-01 0.0212 0.0763 0.831 CD4_TCM L2
ENSG00000146409 SLC18B1 656016 sc-eQTL 5.75e-01 0.0709 0.126 0.831 CD4_TCM L2
ENSG00000028839 TBPL1 -482815 sc-eQTL 1.45e-01 0.174 0.119 0.831 CD4_TEM L2
ENSG00000079950 STX7 956157 sc-eQTL 2.29e-01 0.144 0.119 0.831 CD4_TEM L2
ENSG00000112303 VNN2 705896 sc-eQTL 6.91e-01 -0.0456 0.115 0.831 CD4_TEM L2
ENSG00000112306 RPS12 654786 sc-eQTL 3.68e-01 0.0423 0.0469 0.831 CD4_TEM L2
ENSG00000118515 SGK1 -848757 sc-eQTL 1.65e-01 0.112 0.0805 0.831 CD4_TEM L2
ENSG00000146409 SLC18B1 656016 sc-eQTL 6.81e-01 -0.0481 0.117 0.831 CD4_TEM L2
ENSG00000028839 TBPL1 -482815 sc-eQTL 6.70e-01 -0.0448 0.105 0.831 CD8_CTL L2
ENSG00000079950 STX7 956157 sc-eQTL 3.91e-01 -0.0842 0.0979 0.831 CD8_CTL L2
ENSG00000112303 VNN2 705896 sc-eQTL 8.38e-01 -0.0228 0.111 0.831 CD8_CTL L2
ENSG00000112306 RPS12 654786 sc-eQTL 6.06e-01 0.0307 0.0596 0.831 CD8_CTL L2
ENSG00000118515 SGK1 -848757 sc-eQTL 1.53e-01 0.144 0.1 0.831 CD8_CTL L2
ENSG00000146409 SLC18B1 656016 sc-eQTL 2.53e-01 -0.132 0.115 0.831 CD8_CTL L2
ENSG00000028839 TBPL1 -482815 sc-eQTL 6.94e-02 0.201 0.11 0.831 CD8_Naive L2
ENSG00000079950 STX7 956157 sc-eQTL 7.32e-01 -0.0406 0.118 0.831 CD8_Naive L2
ENSG00000112303 VNN2 705896 sc-eQTL 6.20e-01 0.0506 0.102 0.831 CD8_Naive L2
ENSG00000112306 RPS12 654786 sc-eQTL 9.58e-01 -0.00305 0.0585 0.831 CD8_Naive L2
ENSG00000118515 SGK1 -848757 sc-eQTL 4.42e-01 0.0564 0.0733 0.831 CD8_Naive L2
ENSG00000146409 SLC18B1 656016 sc-eQTL 4.23e-01 -0.0941 0.117 0.831 CD8_Naive L2
ENSG00000028839 TBPL1 -482815 sc-eQTL 4.27e-01 0.0995 0.125 0.829 CD8_TCM L2
ENSG00000079950 STX7 956157 sc-eQTL 9.77e-01 0.0033 0.116 0.829 CD8_TCM L2
ENSG00000112303 VNN2 705896 sc-eQTL 1.42e-01 0.168 0.114 0.829 CD8_TCM L2
ENSG00000112306 RPS12 654786 sc-eQTL 6.99e-01 -0.0217 0.056 0.829 CD8_TCM L2
ENSG00000118515 SGK1 -848757 sc-eQTL 3.38e-03 0.269 0.0907 0.829 CD8_TCM L2
ENSG00000146409 SLC18B1 656016 sc-eQTL 6.17e-01 -0.0615 0.123 0.829 CD8_TCM L2
ENSG00000028839 TBPL1 -482815 sc-eQTL 5.91e-01 0.0628 0.117 0.842 CD8_TEM L2
ENSG00000079950 STX7 956157 sc-eQTL 9.48e-01 0.00838 0.127 0.842 CD8_TEM L2
ENSG00000112303 VNN2 705896 sc-eQTL 5.11e-01 0.0832 0.126 0.842 CD8_TEM L2
ENSG00000112306 RPS12 654786 sc-eQTL 2.52e-01 0.078 0.0679 0.842 CD8_TEM L2
ENSG00000118515 SGK1 -848757 sc-eQTL 2.65e-01 0.124 0.111 0.842 CD8_TEM L2
ENSG00000146409 SLC18B1 656016 sc-eQTL 8.33e-01 -0.0271 0.129 0.842 CD8_TEM L2
ENSG00000028839 TBPL1 -482815 sc-eQTL 7.11e-01 0.0433 0.117 0.831 MAIT L2
ENSG00000079950 STX7 956157 sc-eQTL 9.93e-01 -0.000908 0.111 0.831 MAIT L2
ENSG00000112303 VNN2 705896 sc-eQTL 2.66e-02 -0.249 0.111 0.831 MAIT L2
ENSG00000112306 RPS12 654786 sc-eQTL 8.54e-01 0.0102 0.0555 0.831 MAIT L2
ENSG00000118515 SGK1 -848757 sc-eQTL 4.26e-01 0.0622 0.078 0.831 MAIT L2
ENSG00000146409 SLC18B1 656016 sc-eQTL 6.58e-01 -0.0516 0.116 0.831 MAIT L2
ENSG00000028839 TBPL1 -482815 sc-eQTL 4.75e-01 -0.0907 0.127 0.833 NK_CD56bright L2
ENSG00000079950 STX7 956157 sc-eQTL 4.18e-02 0.238 0.116 0.833 NK_CD56bright L2
ENSG00000112303 VNN2 705896 sc-eQTL 1.56e-01 0.169 0.119 0.833 NK_CD56bright L2
ENSG00000112306 RPS12 654786 sc-eQTL 4.60e-01 -0.0491 0.0664 0.833 NK_CD56bright L2
ENSG00000118515 SGK1 -848757 sc-eQTL 1.96e-01 -0.128 0.099 0.833 NK_CD56bright L2
ENSG00000028839 TBPL1 -482815 sc-eQTL 3.77e-02 0.216 0.103 0.83 NK_CD56dim L2
ENSG00000079950 STX7 956157 sc-eQTL 1.16e-01 -0.15 0.0951 0.83 NK_CD56dim L2
ENSG00000112303 VNN2 705896 sc-eQTL 6.88e-01 0.0481 0.12 0.83 NK_CD56dim L2
ENSG00000112306 RPS12 654786 sc-eQTL 9.71e-01 0.00175 0.0475 0.83 NK_CD56dim L2
ENSG00000118515 SGK1 -848757 sc-eQTL 2.03e-01 0.134 0.105 0.83 NK_CD56dim L2
ENSG00000028839 TBPL1 -482815 sc-eQTL 6.16e-01 -0.0671 0.133 0.838 NK_HLA L2
ENSG00000079950 STX7 956157 sc-eQTL 7.11e-01 0.0451 0.121 0.838 NK_HLA L2
ENSG00000112303 VNN2 705896 sc-eQTL 6.85e-01 0.05 0.123 0.838 NK_HLA L2
ENSG00000112306 RPS12 654786 sc-eQTL 8.31e-01 -0.0122 0.0573 0.838 NK_HLA L2
ENSG00000118515 SGK1 -848757 sc-eQTL 5.84e-01 -0.062 0.113 0.838 NK_HLA L2
ENSG00000028839 TBPL1 -482815 sc-eQTL 6.65e-01 0.046 0.106 0.83 NK_cytokine L2
ENSG00000079950 STX7 956157 sc-eQTL 6.81e-01 0.0423 0.103 0.83 NK_cytokine L2
ENSG00000112303 VNN2 705896 sc-eQTL 5.41e-01 0.0707 0.116 0.83 NK_cytokine L2
ENSG00000112306 RPS12 654786 sc-eQTL 8.20e-01 -0.0143 0.0628 0.83 NK_cytokine L2
ENSG00000118515 SGK1 -848757 sc-eQTL 1.77e-01 0.141 0.104 0.83 NK_cytokine L2
ENSG00000028839 TBPL1 -482815 sc-eQTL 8.63e-01 0.0223 0.129 0.793 PB L2
ENSG00000079950 STX7 956157 sc-eQTL 3.33e-01 0.0889 0.0914 0.793 PB L2
ENSG00000112303 VNN2 705896 sc-eQTL 2.35e-01 -0.133 0.111 0.793 PB L2
ENSG00000112306 RPS12 654786 sc-eQTL 9.71e-01 -0.00229 0.0637 0.793 PB L2
ENSG00000118515 SGK1 -848757 sc-eQTL 2.63e-01 0.115 0.102 0.793 PB L2
ENSG00000146409 SLC18B1 656016 sc-eQTL 1.35e-01 0.178 0.118 0.793 PB L2
ENSG00000028839 TBPL1 -482815 sc-eQTL 9.26e-02 -0.195 0.116 0.833 Pro_T L2
ENSG00000079950 STX7 956157 sc-eQTL 7.11e-01 0.0385 0.104 0.833 Pro_T L2
ENSG00000112303 VNN2 705896 sc-eQTL 4.47e-01 -0.0847 0.111 0.833 Pro_T L2
ENSG00000112306 RPS12 654786 sc-eQTL 3.06e-01 0.0432 0.042 0.833 Pro_T L2
ENSG00000118515 SGK1 -848757 sc-eQTL 9.16e-01 -0.00888 0.0845 0.833 Pro_T L2
ENSG00000146409 SLC18B1 656016 sc-eQTL 9.61e-01 -0.00529 0.109 0.833 Pro_T L2
ENSG00000028839 TBPL1 -482815 sc-eQTL 8.76e-01 -0.0191 0.122 0.831 Treg L2
ENSG00000079950 STX7 956157 sc-eQTL 7.68e-03 0.305 0.113 0.831 Treg L2
ENSG00000112303 VNN2 705896 sc-eQTL 3.54e-01 0.0899 0.0969 0.831 Treg L2
ENSG00000112306 RPS12 654786 sc-eQTL 5.22e-01 0.0275 0.0429 0.831 Treg L2
ENSG00000118515 SGK1 -848757 sc-eQTL 3.06e-01 -0.0925 0.0902 0.831 Treg L2
ENSG00000146409 SLC18B1 656016 sc-eQTL 1.77e-01 -0.163 0.121 0.831 Treg L2
ENSG00000028839 TBPL1 -482815 sc-eQTL 5.34e-01 0.0845 0.136 0.849 cDC L2
ENSG00000079950 STX7 956157 sc-eQTL 4.07e-01 0.0885 0.106 0.849 cDC L2
ENSG00000093134 VNN3 734590 sc-eQTL 9.71e-01 -0.00387 0.106 0.849 cDC L2
ENSG00000112299 VNN1 755300 sc-eQTL 3.37e-01 -0.12 0.124 0.849 cDC L2
ENSG00000112303 VNN2 705896 sc-eQTL 9.32e-01 -0.0104 0.121 0.849 cDC L2
ENSG00000112306 RPS12 654786 sc-eQTL 3.39e-01 -0.0573 0.0598 0.849 cDC L2
ENSG00000118515 SGK1 -848757 sc-eQTL 6.41e-01 0.0471 0.101 0.849 cDC L2
ENSG00000146409 SLC18B1 656016 sc-eQTL 3.76e-01 -0.105 0.118 0.849 cDC L2
ENSG00000286438 AL591115.1 366227 sc-eQTL 6.10e-01 -0.0484 0.0948 0.849 cDC L2
ENSG00000286887 AL355881.1 -826946 sc-eQTL 2.03e-01 0.149 0.116 0.849 cDC L2
ENSG00000028839 TBPL1 -482815 sc-eQTL 9.09e-01 0.0116 0.102 0.831 cMono_IL1B L2
ENSG00000079950 STX7 956157 sc-eQTL 2.96e-01 -0.0806 0.077 0.831 cMono_IL1B L2
ENSG00000093134 VNN3 734590 sc-eQTL 2.78e-03 -0.323 0.107 0.831 cMono_IL1B L2
ENSG00000112299 VNN1 755300 sc-eQTL 7.69e-01 0.0323 0.11 0.831 cMono_IL1B L2
ENSG00000112303 VNN2 705896 sc-eQTL 2.39e-01 -0.103 0.0877 0.831 cMono_IL1B L2
ENSG00000112306 RPS12 654786 sc-eQTL 7.72e-01 0.0141 0.0488 0.831 cMono_IL1B L2
ENSG00000118515 SGK1 -848757 sc-eQTL 3.03e-01 0.075 0.0727 0.831 cMono_IL1B L2
ENSG00000146409 SLC18B1 656016 sc-eQTL 4.81e-01 -0.0664 0.0941 0.831 cMono_IL1B L2
ENSG00000286887 AL355881.1 -826946 sc-eQTL 5.40e-01 0.0602 0.098 0.831 cMono_IL1B L2
ENSG00000028839 TBPL1 -482815 sc-eQTL 2.37e-01 -0.137 0.115 0.831 cMono_S100A L2
ENSG00000079950 STX7 956157 sc-eQTL 6.67e-01 0.036 0.0834 0.831 cMono_S100A L2
ENSG00000093134 VNN3 734590 sc-eQTL 7.06e-03 -0.279 0.102 0.831 cMono_S100A L2
ENSG00000112299 VNN1 755300 sc-eQTL 6.28e-01 -0.0549 0.113 0.831 cMono_S100A L2
ENSG00000112303 VNN2 705896 sc-eQTL 2.39e-01 -0.0872 0.0739 0.831 cMono_S100A L2
ENSG00000112306 RPS12 654786 sc-eQTL 8.86e-01 0.00769 0.0534 0.831 cMono_S100A L2
ENSG00000118515 SGK1 -848757 sc-eQTL 5.45e-02 0.117 0.0605 0.831 cMono_S100A L2
ENSG00000146409 SLC18B1 656016 sc-eQTL 4.07e-02 -0.201 0.0978 0.831 cMono_S100A L2
ENSG00000286887 AL355881.1 -826946 sc-eQTL 9.47e-01 0.00644 0.0966 0.831 cMono_S100A L2
ENSG00000028839 TBPL1 -482815 sc-eQTL 3.61e-01 0.15 0.163 0.845 gdT L2
ENSG00000079950 STX7 956157 sc-eQTL 4.01e-01 -0.118 0.14 0.845 gdT L2
ENSG00000112303 VNN2 705896 sc-eQTL 5.32e-01 -0.0975 0.156 0.845 gdT L2
ENSG00000112306 RPS12 654786 sc-eQTL 7.74e-01 -0.0171 0.0593 0.845 gdT L2
ENSG00000118515 SGK1 -848757 sc-eQTL 7.31e-03 0.297 0.109 0.845 gdT L2
ENSG00000146409 SLC18B1 656016 sc-eQTL 3.03e-01 -0.158 0.153 0.845 gdT L2
ENSG00000028839 TBPL1 -482815 sc-eQTL 6.49e-01 0.0536 0.118 0.829 intMono L2
ENSG00000079950 STX7 956157 sc-eQTL 2.66e-01 -0.125 0.112 0.829 intMono L2
ENSG00000093134 VNN3 734590 sc-eQTL 4.25e-01 -0.0906 0.113 0.829 intMono L2
ENSG00000112299 VNN1 755300 sc-eQTL 9.95e-01 -0.000651 0.112 0.829 intMono L2
ENSG00000112303 VNN2 705896 sc-eQTL 1.54e-02 0.275 0.112 0.829 intMono L2
ENSG00000112306 RPS12 654786 sc-eQTL 8.32e-01 -0.0106 0.0496 0.829 intMono L2
ENSG00000118515 SGK1 -848757 sc-eQTL 5.37e-01 0.0515 0.0833 0.829 intMono L2
ENSG00000146409 SLC18B1 656016 sc-eQTL 1.04e-01 0.196 0.12 0.829 intMono L2
ENSG00000286887 AL355881.1 -826946 sc-eQTL 9.42e-01 0.00839 0.116 0.829 intMono L2
ENSG00000028839 TBPL1 -482815 sc-eQTL 8.75e-01 0.0194 0.123 0.839 ncMono L2
ENSG00000079950 STX7 956157 sc-eQTL 8.75e-01 0.0131 0.0832 0.839 ncMono L2
ENSG00000093134 VNN3 734590 sc-eQTL 2.80e-02 -0.257 0.116 0.839 ncMono L2
ENSG00000112299 VNN1 755300 sc-eQTL 9.26e-01 0.0109 0.117 0.839 ncMono L2
ENSG00000112303 VNN2 705896 sc-eQTL 6.43e-01 0.0521 0.112 0.839 ncMono L2
ENSG00000112306 RPS12 654786 sc-eQTL 5.28e-01 0.0355 0.0562 0.839 ncMono L2
ENSG00000118515 SGK1 -848757 sc-eQTL 4.28e-01 0.0631 0.0794 0.839 ncMono L2
ENSG00000146409 SLC18B1 656016 sc-eQTL 2.08e-01 -0.125 0.0989 0.839 ncMono L2
ENSG00000286887 AL355881.1 -826946 sc-eQTL 9.80e-01 0.00261 0.105 0.839 ncMono L2
ENSG00000028839 TBPL1 -482815 sc-eQTL 7.11e-01 -0.0552 0.149 0.836 pDC L2
ENSG00000079950 STX7 956157 sc-eQTL 1.55e-01 -0.141 0.0984 0.836 pDC L2
ENSG00000093134 VNN3 734590 sc-eQTL 6.36e-01 -0.0472 0.0996 0.836 pDC L2
ENSG00000112299 VNN1 755300 sc-eQTL 1.31e-01 -0.153 0.101 0.836 pDC L2
ENSG00000112303 VNN2 705896 sc-eQTL 1.35e-01 -0.18 0.12 0.836 pDC L2
ENSG00000112306 RPS12 654786 sc-eQTL 6.08e-01 -0.0427 0.0831 0.836 pDC L2
ENSG00000118515 SGK1 -848757 sc-eQTL 3.98e-01 -0.0715 0.0843 0.836 pDC L2
ENSG00000146409 SLC18B1 656016 sc-eQTL 9.46e-01 0.00835 0.123 0.836 pDC L2
ENSG00000286438 AL591115.1 366227 sc-eQTL 2.27e-01 0.142 0.117 0.836 pDC L2
ENSG00000286887 AL355881.1 -826946 sc-eQTL 7.30e-01 0.0361 0.104 0.836 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -482815 sc-eQTL 1.81e-01 0.162 0.121 0.831 B_Memory LOneK1K
ENSG00000079950 STX7 956157 sc-eQTL 9.73e-01 0.00223 0.0668 0.831 B_Memory LOneK1K
ENSG00000112303 VNN2 705896 sc-eQTL 4.68e-01 -0.0767 0.106 0.831 B_Memory LOneK1K
ENSG00000112306 RPS12 654786 sc-eQTL 4.70e-01 0.0435 0.0601 0.831 B_Memory LOneK1K
ENSG00000118515 SGK1 -848757 sc-eQTL 7.72e-01 0.0273 0.0941 0.831 B_Memory LOneK1K
ENSG00000146409 SLC18B1 656016 sc-eQTL 5.93e-01 0.0591 0.11 0.831 B_Memory LOneK1K
ENSG00000028839 TBPL1 -482815 sc-eQTL 6.56e-01 -0.0505 0.113 0.831 B_Naive LOneK1K
ENSG00000079950 STX7 956157 sc-eQTL 3.75e-01 0.0452 0.0509 0.831 B_Naive LOneK1K
ENSG00000112303 VNN2 705896 sc-eQTL 8.99e-01 0.0126 0.0991 0.831 B_Naive LOneK1K
ENSG00000112306 RPS12 654786 sc-eQTL 1.50e-01 0.0862 0.0596 0.831 B_Naive LOneK1K
ENSG00000118515 SGK1 -848757 sc-eQTL 1.25e-01 0.142 0.0923 0.831 B_Naive LOneK1K
ENSG00000146409 SLC18B1 656016 sc-eQTL 4.60e-01 -0.0836 0.113 0.831 B_Naive LOneK1K
ENSG00000028839 TBPL1 -482815 sc-eQTL 7.58e-01 -0.0287 0.0931 0.831 CD14_Mono LOneK1K
ENSG00000079950 STX7 956157 sc-eQTL 6.85e-01 -0.0263 0.0647 0.831 CD14_Mono LOneK1K
ENSG00000093134 VNN3 734590 sc-eQTL 2.82e-03 -0.312 0.103 0.831 CD14_Mono LOneK1K
ENSG00000112299 VNN1 755300 sc-eQTL 9.81e-01 -0.00261 0.11 0.831 CD14_Mono LOneK1K
ENSG00000112303 VNN2 705896 sc-eQTL 3.47e-01 -0.0684 0.0726 0.831 CD14_Mono LOneK1K
ENSG00000112306 RPS12 654786 sc-eQTL 9.92e-01 -0.000525 0.0499 0.831 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -848757 sc-eQTL 1.57e-01 0.096 0.0677 0.831 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 656016 sc-eQTL 8.51e-02 -0.153 0.0882 0.831 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -826946 sc-eQTL 7.31e-01 0.032 0.0931 0.831 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -482815 sc-eQTL 9.71e-01 -0.00431 0.12 0.832 CD16_Mono LOneK1K
ENSG00000079950 STX7 956157 sc-eQTL 2.42e-01 -0.0923 0.0787 0.832 CD16_Mono LOneK1K
ENSG00000093134 VNN3 734590 sc-eQTL 4.92e-03 -0.324 0.114 0.832 CD16_Mono LOneK1K
ENSG00000112299 VNN1 755300 sc-eQTL 9.66e-01 0.0049 0.115 0.832 CD16_Mono LOneK1K
ENSG00000112303 VNN2 705896 sc-eQTL 1.39e-01 0.16 0.108 0.832 CD16_Mono LOneK1K
ENSG00000112306 RPS12 654786 sc-eQTL 7.41e-01 -0.0152 0.046 0.832 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -848757 sc-eQTL 3.98e-01 0.059 0.0696 0.832 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 656016 sc-eQTL 2.46e-01 0.13 0.111 0.832 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -826946 sc-eQTL 6.29e-01 0.0489 0.101 0.832 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -482815 sc-eQTL 8.16e-02 0.167 0.0955 0.83 NK_CD56dim LOneK1K
ENSG00000079950 STX7 956157 sc-eQTL 3.15e-01 -0.0908 0.0901 0.83 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 705896 sc-eQTL 7.47e-01 0.0369 0.114 0.83 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 654786 sc-eQTL 9.33e-01 0.00392 0.0467 0.83 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -848757 sc-eQTL 1.30e-02 0.238 0.095 0.83 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079950 STX7 956157 eQTL 0.0458 0.0442 0.0221 0.0 0.0 0.148
ENSG00000093134 VNN3 734590 eQTL 0.0193 -0.0475 0.0203 0.0 0.0 0.148

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000093134 VNN3 734590 2.8e-07 1.42e-07 5.93e-08 2.2e-07 9.94e-08 8.33e-08 1.9e-07 5.68e-08 1.5e-07 7.6e-08 1.67e-07 1.15e-07 1.87e-07 7.95e-08 5.82e-08 7.89e-08 4.18e-08 1.56e-07 7.09e-08 5.07e-08 1.22e-07 1.31e-07 1.58e-07 3.4e-08 1.85e-07 1.26e-07 1.12e-07 1.06e-07 1.34e-07 1.06e-07 1.06e-07 3.78e-08 3.38e-08 9.52e-08 3.12e-08 2.74e-08 5.35e-08 8.2e-08 6.3e-08 4.41e-08 5.28e-08 1.5e-07 5.08e-08 1.11e-08 3.41e-08 1.68e-08 8.46e-08 1.98e-09 4.83e-08