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Genes within 1Mb (chr6:133463283:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -488887 sc-eQTL 5.00e-01 0.0589 0.0871 0.316 B L1
ENSG00000079950 STX7 950085 sc-eQTL 1.81e-01 0.0464 0.0346 0.316 B L1
ENSG00000112303 VNN2 699824 sc-eQTL 6.32e-01 -0.0313 0.0653 0.316 B L1
ENSG00000112306 RPS12 648714 sc-eQTL 7.03e-01 -0.0151 0.0395 0.316 B L1
ENSG00000118515 SGK1 -854829 sc-eQTL 9.00e-01 0.00764 0.0609 0.316 B L1
ENSG00000146409 SLC18B1 649944 sc-eQTL 3.97e-01 0.0704 0.083 0.316 B L1
ENSG00000028839 TBPL1 -488887 sc-eQTL 2.24e-01 -0.0784 0.0644 0.316 CD4T L1
ENSG00000079950 STX7 950085 sc-eQTL 3.89e-01 0.0578 0.067 0.316 CD4T L1
ENSG00000112303 VNN2 699824 sc-eQTL 2.60e-01 0.0655 0.058 0.316 CD4T L1
ENSG00000112306 RPS12 648714 sc-eQTL 5.44e-01 -0.024 0.0395 0.316 CD4T L1
ENSG00000118515 SGK1 -854829 sc-eQTL 6.62e-01 -0.0232 0.0531 0.316 CD4T L1
ENSG00000146409 SLC18B1 649944 sc-eQTL 2.90e-01 0.0847 0.0798 0.316 CD4T L1
ENSG00000028839 TBPL1 -488887 sc-eQTL 6.46e-01 -0.0294 0.0639 0.316 CD8T L1
ENSG00000079950 STX7 950085 sc-eQTL 1.66e-01 -0.0925 0.0665 0.316 CD8T L1
ENSG00000112303 VNN2 699824 sc-eQTL 9.42e-01 -0.00571 0.078 0.316 CD8T L1
ENSG00000112306 RPS12 648714 sc-eQTL 3.03e-01 -0.0274 0.0266 0.316 CD8T L1
ENSG00000118515 SGK1 -854829 sc-eQTL 9.07e-01 0.00481 0.0411 0.316 CD8T L1
ENSG00000146409 SLC18B1 649944 sc-eQTL 3.05e-01 0.0827 0.0804 0.316 CD8T L1
ENSG00000028839 TBPL1 -488887 sc-eQTL 7.94e-01 0.0254 0.097 0.324 DC L1
ENSG00000079950 STX7 950085 sc-eQTL 8.46e-01 -0.0117 0.0603 0.324 DC L1
ENSG00000093134 VNN3 728518 sc-eQTL 9.23e-01 0.00725 0.0747 0.324 DC L1
ENSG00000112299 VNN1 749228 sc-eQTL 2.85e-01 0.0863 0.0804 0.324 DC L1
ENSG00000112303 VNN2 699824 sc-eQTL 6.57e-01 -0.0383 0.0863 0.324 DC L1
ENSG00000112306 RPS12 648714 sc-eQTL 3.23e-01 -0.0478 0.0483 0.324 DC L1
ENSG00000118515 SGK1 -854829 sc-eQTL 9.04e-01 -0.00677 0.0562 0.324 DC L1
ENSG00000146409 SLC18B1 649944 sc-eQTL 1.83e-01 -0.102 0.0762 0.324 DC L1
ENSG00000286438 AL591115.1 360155 sc-eQTL 2.94e-01 0.0732 0.0695 0.324 DC L1
ENSG00000286887 AL355881.1 -833018 sc-eQTL 3.84e-01 0.0757 0.0867 0.324 DC L1
ENSG00000028839 TBPL1 -488887 sc-eQTL 9.20e-01 0.00675 0.0674 0.316 Mono L1
ENSG00000079950 STX7 950085 sc-eQTL 4.23e-01 0.0362 0.045 0.316 Mono L1
ENSG00000093134 VNN3 728518 sc-eQTL 5.27e-02 -0.149 0.0767 0.316 Mono L1
ENSG00000112299 VNN1 749228 sc-eQTL 1.34e-01 0.125 0.0828 0.316 Mono L1
ENSG00000112303 VNN2 699824 sc-eQTL 8.34e-01 -0.0123 0.0588 0.316 Mono L1
ENSG00000112306 RPS12 648714 sc-eQTL 3.51e-01 -0.0328 0.0351 0.316 Mono L1
ENSG00000118515 SGK1 -854829 sc-eQTL 5.22e-01 0.0318 0.0497 0.316 Mono L1
ENSG00000146409 SLC18B1 649944 sc-eQTL 3.55e-01 -0.0644 0.0695 0.316 Mono L1
ENSG00000286887 AL355881.1 -833018 sc-eQTL 9.21e-01 0.00683 0.0685 0.316 Mono L1
ENSG00000028839 TBPL1 -488887 sc-eQTL 5.20e-01 0.0478 0.0743 0.315 NK L1
ENSG00000079950 STX7 950085 sc-eQTL 8.33e-01 0.0145 0.0687 0.315 NK L1
ENSG00000112303 VNN2 699824 sc-eQTL 2.42e-01 -0.1 0.0853 0.315 NK L1
ENSG00000112306 RPS12 648714 sc-eQTL 8.12e-02 -0.0616 0.0351 0.315 NK L1
ENSG00000118515 SGK1 -854829 sc-eQTL 3.94e-01 -0.0558 0.0653 0.315 NK L1
ENSG00000028839 TBPL1 -488887 sc-eQTL 2.72e-01 -0.0961 0.0872 0.316 Other_T L1
ENSG00000079950 STX7 950085 sc-eQTL 2.54e-01 0.0784 0.0686 0.316 Other_T L1
ENSG00000112303 VNN2 699824 sc-eQTL 4.21e-01 0.0671 0.0831 0.316 Other_T L1
ENSG00000112306 RPS12 648714 sc-eQTL 2.41e-01 -0.0387 0.0329 0.316 Other_T L1
ENSG00000118515 SGK1 -854829 sc-eQTL 6.41e-01 0.0284 0.0607 0.316 Other_T L1
ENSG00000146409 SLC18B1 649944 sc-eQTL 6.10e-01 -0.0461 0.0903 0.316 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -488887 sc-eQTL 6.48e-01 0.0459 0.1 0.309 B_Activated L2
ENSG00000079950 STX7 950085 sc-eQTL 4.56e-01 -0.0642 0.0859 0.309 B_Activated L2
ENSG00000112303 VNN2 699824 sc-eQTL 8.11e-02 0.159 0.0908 0.309 B_Activated L2
ENSG00000112306 RPS12 648714 sc-eQTL 9.49e-01 -0.00314 0.0491 0.309 B_Activated L2
ENSG00000118515 SGK1 -854829 sc-eQTL 1.70e-01 0.12 0.087 0.309 B_Activated L2
ENSG00000146409 SLC18B1 649944 sc-eQTL 7.57e-01 -0.0266 0.0859 0.309 B_Activated L2
ENSG00000028839 TBPL1 -488887 sc-eQTL 1.06e-01 0.155 0.0955 0.315 B_Intermediate L2
ENSG00000079950 STX7 950085 sc-eQTL 1.46e-01 0.0801 0.0549 0.315 B_Intermediate L2
ENSG00000112303 VNN2 699824 sc-eQTL 6.94e-01 -0.0327 0.0831 0.315 B_Intermediate L2
ENSG00000112306 RPS12 648714 sc-eQTL 4.92e-01 -0.035 0.0508 0.315 B_Intermediate L2
ENSG00000118515 SGK1 -854829 sc-eQTL 5.82e-01 0.0485 0.088 0.315 B_Intermediate L2
ENSG00000146409 SLC18B1 649944 sc-eQTL 5.50e-01 0.0549 0.0916 0.315 B_Intermediate L2
ENSG00000028839 TBPL1 -488887 sc-eQTL 6.21e-01 -0.046 0.0927 0.317 B_Memory L2
ENSG00000079950 STX7 950085 sc-eQTL 7.20e-02 0.12 0.0666 0.317 B_Memory L2
ENSG00000112303 VNN2 699824 sc-eQTL 4.09e-01 0.0725 0.0877 0.317 B_Memory L2
ENSG00000112306 RPS12 648714 sc-eQTL 5.40e-01 -0.0259 0.0423 0.317 B_Memory L2
ENSG00000118515 SGK1 -854829 sc-eQTL 3.12e-01 0.0785 0.0774 0.317 B_Memory L2
ENSG00000146409 SLC18B1 649944 sc-eQTL 2.68e-01 0.0979 0.088 0.317 B_Memory L2
ENSG00000028839 TBPL1 -488887 sc-eQTL 9.67e-01 -0.00365 0.0871 0.316 B_Naive1 L2
ENSG00000079950 STX7 950085 sc-eQTL 2.53e-01 0.0478 0.0417 0.316 B_Naive1 L2
ENSG00000112303 VNN2 699824 sc-eQTL 1.40e-01 -0.12 0.0808 0.316 B_Naive1 L2
ENSG00000112306 RPS12 648714 sc-eQTL 9.71e-01 0.00169 0.0463 0.316 B_Naive1 L2
ENSG00000118515 SGK1 -854829 sc-eQTL 6.99e-01 0.028 0.0724 0.316 B_Naive1 L2
ENSG00000146409 SLC18B1 649944 sc-eQTL 2.99e-01 0.0927 0.0891 0.316 B_Naive1 L2
ENSG00000028839 TBPL1 -488887 sc-eQTL 8.47e-01 0.0178 0.0925 0.315 B_Naive2 L2
ENSG00000079950 STX7 950085 sc-eQTL 1.48e-01 0.071 0.0489 0.315 B_Naive2 L2
ENSG00000112303 VNN2 699824 sc-eQTL 9.39e-01 -0.00691 0.0902 0.315 B_Naive2 L2
ENSG00000112306 RPS12 648714 sc-eQTL 6.98e-01 0.0186 0.0478 0.315 B_Naive2 L2
ENSG00000118515 SGK1 -854829 sc-eQTL 1.75e-01 0.115 0.084 0.315 B_Naive2 L2
ENSG00000146409 SLC18B1 649944 sc-eQTL 6.03e-01 -0.0474 0.0911 0.315 B_Naive2 L2
ENSG00000028839 TBPL1 -488887 sc-eQTL 5.89e-02 0.173 0.0912 0.311 CD4_CTL L2
ENSG00000079950 STX7 950085 sc-eQTL 9.92e-01 -0.000947 0.0914 0.311 CD4_CTL L2
ENSG00000112303 VNN2 699824 sc-eQTL 5.22e-01 0.0591 0.0921 0.311 CD4_CTL L2
ENSG00000112306 RPS12 648714 sc-eQTL 9.60e-01 0.00215 0.0426 0.311 CD4_CTL L2
ENSG00000118515 SGK1 -854829 sc-eQTL 4.75e-01 0.0527 0.0737 0.311 CD4_CTL L2
ENSG00000146409 SLC18B1 649944 sc-eQTL 2.99e-01 0.0892 0.0856 0.311 CD4_CTL L2
ENSG00000028839 TBPL1 -488887 sc-eQTL 4.79e-02 -0.147 0.0737 0.316 CD4_Naive L2
ENSG00000079950 STX7 950085 sc-eQTL 5.22e-01 0.0467 0.0729 0.316 CD4_Naive L2
ENSG00000112303 VNN2 699824 sc-eQTL 4.00e-01 0.0569 0.0674 0.316 CD4_Naive L2
ENSG00000112306 RPS12 648714 sc-eQTL 7.13e-01 -0.0161 0.0438 0.316 CD4_Naive L2
ENSG00000118515 SGK1 -854829 sc-eQTL 7.33e-01 0.0183 0.0537 0.316 CD4_Naive L2
ENSG00000146409 SLC18B1 649944 sc-eQTL 6.17e-01 0.0422 0.0843 0.316 CD4_Naive L2
ENSG00000028839 TBPL1 -488887 sc-eQTL 2.95e-01 -0.083 0.079 0.316 CD4_TCM L2
ENSG00000079950 STX7 950085 sc-eQTL 5.38e-01 0.0491 0.0797 0.316 CD4_TCM L2
ENSG00000112303 VNN2 699824 sc-eQTL 9.96e-01 -0.000349 0.0786 0.316 CD4_TCM L2
ENSG00000112306 RPS12 648714 sc-eQTL 1.45e-01 -0.0594 0.0405 0.316 CD4_TCM L2
ENSG00000118515 SGK1 -854829 sc-eQTL 4.27e-01 -0.0454 0.0569 0.316 CD4_TCM L2
ENSG00000146409 SLC18B1 649944 sc-eQTL 2.39e-02 0.212 0.0932 0.316 CD4_TCM L2
ENSG00000028839 TBPL1 -488887 sc-eQTL 3.95e-01 0.0782 0.0918 0.316 CD4_TEM L2
ENSG00000079950 STX7 950085 sc-eQTL 6.28e-01 0.0447 0.092 0.316 CD4_TEM L2
ENSG00000112303 VNN2 699824 sc-eQTL 6.27e-01 0.043 0.0883 0.316 CD4_TEM L2
ENSG00000112306 RPS12 648714 sc-eQTL 5.31e-01 -0.0227 0.0362 0.316 CD4_TEM L2
ENSG00000118515 SGK1 -854829 sc-eQTL 5.17e-01 -0.0404 0.0622 0.316 CD4_TEM L2
ENSG00000146409 SLC18B1 649944 sc-eQTL 1.77e-01 0.121 0.0897 0.316 CD4_TEM L2
ENSG00000028839 TBPL1 -488887 sc-eQTL 9.27e-01 0.00748 0.0819 0.316 CD8_CTL L2
ENSG00000079950 STX7 950085 sc-eQTL 9.10e-02 -0.129 0.076 0.316 CD8_CTL L2
ENSG00000112303 VNN2 699824 sc-eQTL 9.11e-01 0.00972 0.0869 0.316 CD8_CTL L2
ENSG00000112306 RPS12 648714 sc-eQTL 7.76e-01 -0.0133 0.0465 0.316 CD8_CTL L2
ENSG00000118515 SGK1 -854829 sc-eQTL 3.93e-01 0.0672 0.0785 0.316 CD8_CTL L2
ENSG00000146409 SLC18B1 649944 sc-eQTL 9.93e-01 0.000749 0.0902 0.316 CD8_CTL L2
ENSG00000028839 TBPL1 -488887 sc-eQTL 9.23e-01 0.00841 0.0874 0.316 CD8_Naive L2
ENSG00000079950 STX7 950085 sc-eQTL 6.07e-01 0.0479 0.093 0.316 CD8_Naive L2
ENSG00000112303 VNN2 699824 sc-eQTL 3.03e-01 -0.0827 0.0801 0.316 CD8_Naive L2
ENSG00000112306 RPS12 648714 sc-eQTL 9.22e-01 -0.0045 0.046 0.316 CD8_Naive L2
ENSG00000118515 SGK1 -854829 sc-eQTL 5.31e-01 -0.0362 0.0577 0.316 CD8_Naive L2
ENSG00000146409 SLC18B1 649944 sc-eQTL 6.88e-01 0.0371 0.0922 0.316 CD8_Naive L2
ENSG00000028839 TBPL1 -488887 sc-eQTL 2.20e-01 -0.119 0.0968 0.317 CD8_TCM L2
ENSG00000079950 STX7 950085 sc-eQTL 2.70e-01 0.0991 0.0897 0.317 CD8_TCM L2
ENSG00000112303 VNN2 699824 sc-eQTL 7.69e-01 -0.0262 0.0893 0.317 CD8_TCM L2
ENSG00000112306 RPS12 648714 sc-eQTL 1.33e-01 -0.0653 0.0433 0.317 CD8_TCM L2
ENSG00000118515 SGK1 -854829 sc-eQTL 7.09e-02 0.13 0.0715 0.317 CD8_TCM L2
ENSG00000146409 SLC18B1 649944 sc-eQTL 8.50e-01 -0.018 0.0954 0.317 CD8_TCM L2
ENSG00000028839 TBPL1 -488887 sc-eQTL 8.30e-01 0.0193 0.0898 0.32 CD8_TEM L2
ENSG00000079950 STX7 950085 sc-eQTL 3.80e-01 -0.0861 0.0978 0.32 CD8_TEM L2
ENSG00000112303 VNN2 699824 sc-eQTL 4.85e-02 0.192 0.0965 0.32 CD8_TEM L2
ENSG00000112306 RPS12 648714 sc-eQTL 9.62e-02 0.087 0.052 0.32 CD8_TEM L2
ENSG00000118515 SGK1 -854829 sc-eQTL 9.63e-01 -0.00398 0.0859 0.32 CD8_TEM L2
ENSG00000146409 SLC18B1 649944 sc-eQTL 5.61e-02 0.189 0.0982 0.32 CD8_TEM L2
ENSG00000028839 TBPL1 -488887 sc-eQTL 2.78e-01 -0.1 0.092 0.314 MAIT L2
ENSG00000079950 STX7 950085 sc-eQTL 6.28e-01 -0.0425 0.0876 0.314 MAIT L2
ENSG00000112303 VNN2 699824 sc-eQTL 6.45e-01 0.0412 0.0891 0.314 MAIT L2
ENSG00000112306 RPS12 648714 sc-eQTL 2.24e-02 -0.0997 0.0433 0.314 MAIT L2
ENSG00000118515 SGK1 -854829 sc-eQTL 5.05e-01 0.0412 0.0617 0.314 MAIT L2
ENSG00000146409 SLC18B1 649944 sc-eQTL 4.81e-01 -0.0649 0.0919 0.314 MAIT L2
ENSG00000028839 TBPL1 -488887 sc-eQTL 5.39e-01 -0.0611 0.0992 0.311 NK_CD56bright L2
ENSG00000079950 STX7 950085 sc-eQTL 6.41e-01 -0.043 0.0921 0.311 NK_CD56bright L2
ENSG00000112303 VNN2 699824 sc-eQTL 6.70e-01 -0.0399 0.0935 0.311 NK_CD56bright L2
ENSG00000112306 RPS12 648714 sc-eQTL 6.17e-01 -0.0261 0.0521 0.311 NK_CD56bright L2
ENSG00000118515 SGK1 -854829 sc-eQTL 4.31e-01 -0.0613 0.0778 0.311 NK_CD56bright L2
ENSG00000028839 TBPL1 -488887 sc-eQTL 7.00e-01 0.0307 0.0794 0.315 NK_CD56dim L2
ENSG00000079950 STX7 950085 sc-eQTL 7.10e-01 -0.0271 0.0727 0.315 NK_CD56dim L2
ENSG00000112303 VNN2 699824 sc-eQTL 7.10e-02 -0.164 0.0903 0.315 NK_CD56dim L2
ENSG00000112306 RPS12 648714 sc-eQTL 1.74e-01 -0.049 0.0359 0.315 NK_CD56dim L2
ENSG00000118515 SGK1 -854829 sc-eQTL 8.29e-01 0.0173 0.08 0.315 NK_CD56dim L2
ENSG00000028839 TBPL1 -488887 sc-eQTL 8.71e-01 0.0161 0.0992 0.313 NK_HLA L2
ENSG00000079950 STX7 950085 sc-eQTL 7.01e-01 0.0347 0.0902 0.313 NK_HLA L2
ENSG00000112303 VNN2 699824 sc-eQTL 7.94e-01 -0.0239 0.0914 0.313 NK_HLA L2
ENSG00000112306 RPS12 648714 sc-eQTL 2.16e-01 -0.0527 0.0424 0.313 NK_HLA L2
ENSG00000118515 SGK1 -854829 sc-eQTL 2.73e-01 0.0921 0.0839 0.313 NK_HLA L2
ENSG00000028839 TBPL1 -488887 sc-eQTL 8.38e-01 0.0168 0.082 0.315 NK_cytokine L2
ENSG00000079950 STX7 950085 sc-eQTL 1.16e-01 0.125 0.0789 0.315 NK_cytokine L2
ENSG00000112303 VNN2 699824 sc-eQTL 7.29e-01 -0.0309 0.0892 0.315 NK_cytokine L2
ENSG00000112306 RPS12 648714 sc-eQTL 6.56e-01 -0.0216 0.0484 0.315 NK_cytokine L2
ENSG00000118515 SGK1 -854829 sc-eQTL 4.29e-01 -0.0638 0.0805 0.315 NK_cytokine L2
ENSG00000028839 TBPL1 -488887 sc-eQTL 9.34e-01 -0.00915 0.11 0.315 PB L2
ENSG00000079950 STX7 950085 sc-eQTL 3.70e-01 -0.0705 0.0783 0.315 PB L2
ENSG00000112303 VNN2 699824 sc-eQTL 5.09e-01 -0.0635 0.0959 0.315 PB L2
ENSG00000112306 RPS12 648714 sc-eQTL 2.32e-01 -0.0651 0.0542 0.315 PB L2
ENSG00000118515 SGK1 -854829 sc-eQTL 8.13e-01 0.0209 0.0881 0.315 PB L2
ENSG00000146409 SLC18B1 649944 sc-eQTL 8.88e-01 -0.0145 0.102 0.315 PB L2
ENSG00000028839 TBPL1 -488887 sc-eQTL 9.62e-01 0.00445 0.0937 0.317 Pro_T L2
ENSG00000079950 STX7 950085 sc-eQTL 6.99e-02 0.151 0.083 0.317 Pro_T L2
ENSG00000112303 VNN2 699824 sc-eQTL 8.76e-01 -0.014 0.0897 0.317 Pro_T L2
ENSG00000112306 RPS12 648714 sc-eQTL 5.93e-01 -0.0182 0.0339 0.317 Pro_T L2
ENSG00000118515 SGK1 -854829 sc-eQTL 5.28e-01 0.043 0.068 0.317 Pro_T L2
ENSG00000146409 SLC18B1 649944 sc-eQTL 9.36e-01 0.00709 0.0879 0.317 Pro_T L2
ENSG00000028839 TBPL1 -488887 sc-eQTL 5.95e-01 -0.0502 0.0944 0.316 Treg L2
ENSG00000079950 STX7 950085 sc-eQTL 3.90e-01 0.0765 0.0889 0.316 Treg L2
ENSG00000112303 VNN2 699824 sc-eQTL 5.97e-01 0.0396 0.0749 0.316 Treg L2
ENSG00000112306 RPS12 648714 sc-eQTL 6.85e-01 0.0135 0.0331 0.316 Treg L2
ENSG00000118515 SGK1 -854829 sc-eQTL 8.46e-01 0.0136 0.0698 0.316 Treg L2
ENSG00000146409 SLC18B1 649944 sc-eQTL 9.29e-01 -0.00833 0.0936 0.316 Treg L2
ENSG00000028839 TBPL1 -488887 sc-eQTL 9.66e-01 -0.00419 0.0994 0.32 cDC L2
ENSG00000079950 STX7 950085 sc-eQTL 7.36e-01 0.0263 0.078 0.32 cDC L2
ENSG00000093134 VNN3 728518 sc-eQTL 8.51e-01 -0.0146 0.0775 0.32 cDC L2
ENSG00000112299 VNN1 749228 sc-eQTL 4.71e-01 0.0657 0.091 0.32 cDC L2
ENSG00000112303 VNN2 699824 sc-eQTL 9.61e-01 0.00431 0.0888 0.32 cDC L2
ENSG00000112306 RPS12 648714 sc-eQTL 7.52e-01 -0.0138 0.0438 0.32 cDC L2
ENSG00000118515 SGK1 -854829 sc-eQTL 3.35e-01 0.0712 0.0737 0.32 cDC L2
ENSG00000146409 SLC18B1 649944 sc-eQTL 5.01e-01 0.0585 0.0867 0.32 cDC L2
ENSG00000286438 AL591115.1 360155 sc-eQTL 6.76e-01 -0.0291 0.0694 0.32 cDC L2
ENSG00000286887 AL355881.1 -833018 sc-eQTL 2.66e-01 0.0949 0.0851 0.32 cDC L2
ENSG00000028839 TBPL1 -488887 sc-eQTL 7.54e-01 0.0241 0.0769 0.316 cMono_IL1B L2
ENSG00000079950 STX7 950085 sc-eQTL 6.43e-01 0.0271 0.0584 0.316 cMono_IL1B L2
ENSG00000093134 VNN3 728518 sc-eQTL 2.10e-01 -0.103 0.0822 0.316 cMono_IL1B L2
ENSG00000112299 VNN1 749228 sc-eQTL 2.20e-01 0.102 0.083 0.316 cMono_IL1B L2
ENSG00000112303 VNN2 699824 sc-eQTL 9.87e-01 -0.00106 0.0666 0.316 cMono_IL1B L2
ENSG00000112306 RPS12 648714 sc-eQTL 3.87e-01 -0.032 0.0369 0.316 cMono_IL1B L2
ENSG00000118515 SGK1 -854829 sc-eQTL 6.88e-01 0.0222 0.0551 0.316 cMono_IL1B L2
ENSG00000146409 SLC18B1 649944 sc-eQTL 5.43e-01 -0.0434 0.0713 0.316 cMono_IL1B L2
ENSG00000286887 AL355881.1 -833018 sc-eQTL 8.92e-01 0.0101 0.0743 0.316 cMono_IL1B L2
ENSG00000028839 TBPL1 -488887 sc-eQTL 6.22e-01 -0.0431 0.0872 0.316 cMono_S100A L2
ENSG00000079950 STX7 950085 sc-eQTL 3.70e-02 0.131 0.0624 0.316 cMono_S100A L2
ENSG00000093134 VNN3 728518 sc-eQTL 2.85e-02 -0.172 0.0778 0.316 cMono_S100A L2
ENSG00000112299 VNN1 749228 sc-eQTL 1.04e-01 0.139 0.0849 0.316 cMono_S100A L2
ENSG00000112303 VNN2 699824 sc-eQTL 5.61e-01 -0.0326 0.0559 0.316 cMono_S100A L2
ENSG00000112306 RPS12 648714 sc-eQTL 6.57e-01 -0.0179 0.0403 0.316 cMono_S100A L2
ENSG00000118515 SGK1 -854829 sc-eQTL 1.48e-01 0.0666 0.0459 0.316 cMono_S100A L2
ENSG00000146409 SLC18B1 649944 sc-eQTL 2.54e-01 -0.085 0.0744 0.316 cMono_S100A L2
ENSG00000286887 AL355881.1 -833018 sc-eQTL 5.43e-01 -0.0444 0.0729 0.316 cMono_S100A L2
ENSG00000028839 TBPL1 -488887 sc-eQTL 5.90e-01 0.064 0.119 0.312 gdT L2
ENSG00000079950 STX7 950085 sc-eQTL 1.36e-02 0.25 0.0999 0.312 gdT L2
ENSG00000112303 VNN2 699824 sc-eQTL 2.15e-01 -0.14 0.112 0.312 gdT L2
ENSG00000112306 RPS12 648714 sc-eQTL 7.93e-01 -0.0113 0.043 0.312 gdT L2
ENSG00000118515 SGK1 -854829 sc-eQTL 4.64e-03 0.227 0.0789 0.312 gdT L2
ENSG00000146409 SLC18B1 649944 sc-eQTL 5.29e-01 0.07 0.111 0.312 gdT L2
ENSG00000028839 TBPL1 -488887 sc-eQTL 7.74e-01 0.0258 0.0897 0.322 intMono L2
ENSG00000079950 STX7 950085 sc-eQTL 6.79e-01 -0.0355 0.0857 0.322 intMono L2
ENSG00000093134 VNN3 728518 sc-eQTL 3.36e-02 -0.183 0.0856 0.322 intMono L2
ENSG00000112299 VNN1 749228 sc-eQTL 6.42e-02 0.158 0.0848 0.322 intMono L2
ENSG00000112303 VNN2 699824 sc-eQTL 6.58e-01 0.0386 0.0869 0.322 intMono L2
ENSG00000112306 RPS12 648714 sc-eQTL 2.44e-01 -0.0441 0.0377 0.322 intMono L2
ENSG00000118515 SGK1 -854829 sc-eQTL 9.33e-01 -0.00533 0.0636 0.322 intMono L2
ENSG00000146409 SLC18B1 649944 sc-eQTL 2.49e-01 0.106 0.0918 0.322 intMono L2
ENSG00000286887 AL355881.1 -833018 sc-eQTL 7.81e-01 0.0245 0.0881 0.322 intMono L2
ENSG00000028839 TBPL1 -488887 sc-eQTL 7.44e-01 0.0312 0.0953 0.317 ncMono L2
ENSG00000079950 STX7 950085 sc-eQTL 4.63e-01 -0.0473 0.0643 0.317 ncMono L2
ENSG00000093134 VNN3 728518 sc-eQTL 9.12e-01 0.01 0.0909 0.317 ncMono L2
ENSG00000112299 VNN1 749228 sc-eQTL 3.68e-01 0.0813 0.0901 0.317 ncMono L2
ENSG00000112303 VNN2 699824 sc-eQTL 3.80e-01 0.0762 0.0866 0.317 ncMono L2
ENSG00000112306 RPS12 648714 sc-eQTL 7.06e-01 -0.0164 0.0435 0.317 ncMono L2
ENSG00000118515 SGK1 -854829 sc-eQTL 8.98e-03 0.16 0.0605 0.317 ncMono L2
ENSG00000146409 SLC18B1 649944 sc-eQTL 5.99e-01 -0.0405 0.0768 0.317 ncMono L2
ENSG00000286887 AL355881.1 -833018 sc-eQTL 3.86e-02 0.167 0.0804 0.317 ncMono L2
ENSG00000028839 TBPL1 -488887 sc-eQTL 3.82e-01 -0.0967 0.11 0.319 pDC L2
ENSG00000079950 STX7 950085 sc-eQTL 6.72e-01 -0.0313 0.0736 0.319 pDC L2
ENSG00000093134 VNN3 728518 sc-eQTL 5.56e-01 -0.0436 0.074 0.319 pDC L2
ENSG00000112299 VNN1 749228 sc-eQTL 1.71e-01 0.103 0.075 0.319 pDC L2
ENSG00000112303 VNN2 699824 sc-eQTL 2.46e-01 -0.104 0.0894 0.319 pDC L2
ENSG00000112306 RPS12 648714 sc-eQTL 8.94e-01 -0.00827 0.0618 0.319 pDC L2
ENSG00000118515 SGK1 -854829 sc-eQTL 5.39e-01 0.0386 0.0628 0.319 pDC L2
ENSG00000146409 SLC18B1 649944 sc-eQTL 1.43e-02 -0.222 0.0898 0.319 pDC L2
ENSG00000286438 AL591115.1 360155 sc-eQTL 6.64e-01 0.0381 0.0875 0.319 pDC L2
ENSG00000286887 AL355881.1 -833018 sc-eQTL 4.35e-01 0.0607 0.0775 0.319 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -488887 sc-eQTL 1.06e-01 0.153 0.0941 0.316 B_Memory LOneK1K
ENSG00000079950 STX7 950085 sc-eQTL 1.16e-01 0.0818 0.0518 0.316 B_Memory LOneK1K
ENSG00000112303 VNN2 699824 sc-eQTL 2.79e-01 0.0893 0.0822 0.316 B_Memory LOneK1K
ENSG00000112306 RPS12 648714 sc-eQTL 9.27e-01 -0.00431 0.047 0.316 B_Memory LOneK1K
ENSG00000118515 SGK1 -854829 sc-eQTL 2.22e-01 0.0897 0.0732 0.316 B_Memory LOneK1K
ENSG00000146409 SLC18B1 649944 sc-eQTL 9.78e-02 0.142 0.0856 0.316 B_Memory LOneK1K
ENSG00000028839 TBPL1 -488887 sc-eQTL 8.44e-01 0.0171 0.0869 0.316 B_Naive LOneK1K
ENSG00000079950 STX7 950085 sc-eQTL 1.08e-01 0.0628 0.0389 0.316 B_Naive LOneK1K
ENSG00000112303 VNN2 699824 sc-eQTL 2.83e-01 -0.0817 0.0759 0.316 B_Naive LOneK1K
ENSG00000112306 RPS12 648714 sc-eQTL 8.91e-01 0.00633 0.046 0.316 B_Naive LOneK1K
ENSG00000118515 SGK1 -854829 sc-eQTL 5.21e-01 0.0458 0.0712 0.316 B_Naive LOneK1K
ENSG00000146409 SLC18B1 649944 sc-eQTL 6.71e-01 0.0369 0.0868 0.316 B_Naive LOneK1K
ENSG00000028839 TBPL1 -488887 sc-eQTL 8.19e-01 -0.016 0.07 0.316 CD14_Mono LOneK1K
ENSG00000079950 STX7 950085 sc-eQTL 1.88e-01 0.0641 0.0485 0.316 CD14_Mono LOneK1K
ENSG00000093134 VNN3 728518 sc-eQTL 5.75e-02 -0.15 0.0787 0.316 CD14_Mono LOneK1K
ENSG00000112299 VNN1 749228 sc-eQTL 7.79e-02 0.146 0.0822 0.316 CD14_Mono LOneK1K
ENSG00000112303 VNN2 699824 sc-eQTL 8.31e-01 -0.0117 0.0547 0.316 CD14_Mono LOneK1K
ENSG00000112306 RPS12 648714 sc-eQTL 3.83e-01 -0.0328 0.0375 0.316 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -854829 sc-eQTL 5.59e-01 0.0299 0.0511 0.316 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 649944 sc-eQTL 2.67e-01 -0.0741 0.0666 0.316 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -833018 sc-eQTL 7.58e-01 -0.0216 0.07 0.316 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -488887 sc-eQTL 9.18e-01 0.00949 0.0918 0.317 CD16_Mono LOneK1K
ENSG00000079950 STX7 950085 sc-eQTL 1.44e-01 -0.0884 0.0603 0.317 CD16_Mono LOneK1K
ENSG00000093134 VNN3 728518 sc-eQTL 1.42e-01 -0.131 0.0887 0.317 CD16_Mono LOneK1K
ENSG00000112299 VNN1 749228 sc-eQTL 2.26e-01 0.107 0.088 0.317 CD16_Mono LOneK1K
ENSG00000112303 VNN2 699824 sc-eQTL 2.24e-01 0.101 0.083 0.317 CD16_Mono LOneK1K
ENSG00000112306 RPS12 648714 sc-eQTL 6.56e-01 -0.0157 0.0353 0.317 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -854829 sc-eQTL 1.82e-01 0.0713 0.0532 0.317 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 649944 sc-eQTL 9.68e-01 0.00344 0.0858 0.317 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -833018 sc-eQTL 2.63e-01 0.0868 0.0773 0.317 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -488887 sc-eQTL 4.68e-01 0.0533 0.0734 0.315 NK_CD56dim LOneK1K
ENSG00000079950 STX7 950085 sc-eQTL 7.76e-01 0.0197 0.069 0.315 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 699824 sc-eQTL 1.71e-01 -0.12 0.087 0.315 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 648714 sc-eQTL 1.09e-01 -0.0571 0.0354 0.315 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -854829 sc-eQTL 7.80e-01 -0.0206 0.0737 0.315 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079950 STX7 950085 eQTL 0.00197 0.0523 0.0169 0.0 0.0 0.307
ENSG00000112299 VNN1 749228 pQTL 0.00029 0.135 0.0371 0.0 0.0 0.323
ENSG00000112303 VNN2 699824 eQTL 0.0127 0.0344 0.0138 0.0 0.0 0.307
ENSG00000146409 SLC18B1 649944 eQTL 0.00926 0.0618 0.0237 0.0 0.0 0.307

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina