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Genes within 1Mb (chr6:133462117:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -490053 sc-eQTL 4.10e-01 0.0721 0.0873 0.318 B L1
ENSG00000079950 STX7 948919 sc-eQTL 1.66e-01 0.0482 0.0347 0.318 B L1
ENSG00000112303 VNN2 698658 sc-eQTL 4.79e-01 -0.0464 0.0654 0.318 B L1
ENSG00000112306 RPS12 647548 sc-eQTL 7.05e-01 -0.015 0.0396 0.318 B L1
ENSG00000118515 SGK1 -855995 sc-eQTL 9.59e-01 0.00317 0.0611 0.318 B L1
ENSG00000146409 SLC18B1 648778 sc-eQTL 4.38e-01 0.0647 0.0832 0.318 B L1
ENSG00000028839 TBPL1 -490053 sc-eQTL 2.06e-01 -0.0818 0.0644 0.318 CD4T L1
ENSG00000079950 STX7 948919 sc-eQTL 4.91e-01 0.0463 0.0672 0.318 CD4T L1
ENSG00000112303 VNN2 698658 sc-eQTL 2.73e-01 0.0638 0.0581 0.318 CD4T L1
ENSG00000112306 RPS12 647548 sc-eQTL 5.88e-01 -0.0214 0.0396 0.318 CD4T L1
ENSG00000118515 SGK1 -855995 sc-eQTL 7.17e-01 -0.0193 0.0532 0.318 CD4T L1
ENSG00000146409 SLC18B1 648778 sc-eQTL 3.04e-01 0.0823 0.0799 0.318 CD4T L1
ENSG00000028839 TBPL1 -490053 sc-eQTL 5.99e-01 -0.0338 0.0641 0.318 CD8T L1
ENSG00000079950 STX7 948919 sc-eQTL 1.78e-01 -0.09 0.0666 0.318 CD8T L1
ENSG00000112303 VNN2 698658 sc-eQTL 9.34e-01 -0.00648 0.0781 0.318 CD8T L1
ENSG00000112306 RPS12 647548 sc-eQTL 3.08e-01 -0.0272 0.0266 0.318 CD8T L1
ENSG00000118515 SGK1 -855995 sc-eQTL 8.33e-01 0.00868 0.0411 0.318 CD8T L1
ENSG00000146409 SLC18B1 648778 sc-eQTL 2.48e-01 0.0933 0.0805 0.318 CD8T L1
ENSG00000028839 TBPL1 -490053 sc-eQTL 7.32e-01 0.0332 0.0969 0.327 DC L1
ENSG00000079950 STX7 948919 sc-eQTL 8.81e-01 -0.00903 0.0602 0.327 DC L1
ENSG00000093134 VNN3 727352 sc-eQTL 1.00e+00 -2.92e-05 0.0747 0.327 DC L1
ENSG00000112299 VNN1 748062 sc-eQTL 2.22e-01 0.0984 0.0803 0.327 DC L1
ENSG00000112303 VNN2 698658 sc-eQTL 7.59e-01 -0.0265 0.0862 0.327 DC L1
ENSG00000112306 RPS12 647548 sc-eQTL 3.27e-01 -0.0474 0.0482 0.327 DC L1
ENSG00000118515 SGK1 -855995 sc-eQTL 8.72e-01 -0.00906 0.0561 0.327 DC L1
ENSG00000146409 SLC18B1 648778 sc-eQTL 2.17e-01 -0.0944 0.0762 0.327 DC L1
ENSG00000286438 AL591115.1 358989 sc-eQTL 3.43e-01 0.066 0.0695 0.327 DC L1
ENSG00000286887 AL355881.1 -834184 sc-eQTL 4.86e-01 0.0605 0.0867 0.327 DC L1
ENSG00000028839 TBPL1 -490053 sc-eQTL 8.08e-01 0.0164 0.0673 0.318 Mono L1
ENSG00000079950 STX7 948919 sc-eQTL 5.08e-01 0.0299 0.045 0.318 Mono L1
ENSG00000093134 VNN3 727352 sc-eQTL 8.35e-02 -0.134 0.0768 0.318 Mono L1
ENSG00000112299 VNN1 748062 sc-eQTL 1.17e-01 0.13 0.0827 0.318 Mono L1
ENSG00000112303 VNN2 698658 sc-eQTL 9.02e-01 -0.00723 0.0587 0.318 Mono L1
ENSG00000112306 RPS12 647548 sc-eQTL 4.29e-01 -0.0278 0.0351 0.318 Mono L1
ENSG00000118515 SGK1 -855995 sc-eQTL 5.27e-01 0.0315 0.0497 0.318 Mono L1
ENSG00000146409 SLC18B1 648778 sc-eQTL 4.04e-01 -0.0582 0.0695 0.318 Mono L1
ENSG00000286887 AL355881.1 -834184 sc-eQTL 8.94e-01 0.00913 0.0684 0.318 Mono L1
ENSG00000028839 TBPL1 -490053 sc-eQTL 5.26e-01 0.0472 0.0744 0.318 NK L1
ENSG00000079950 STX7 948919 sc-eQTL 8.64e-01 0.0118 0.0689 0.318 NK L1
ENSG00000112303 VNN2 698658 sc-eQTL 2.14e-01 -0.106 0.0854 0.318 NK L1
ENSG00000112306 RPS12 647548 sc-eQTL 8.96e-02 -0.0601 0.0352 0.318 NK L1
ENSG00000118515 SGK1 -855995 sc-eQTL 4.21e-01 -0.0528 0.0655 0.318 NK L1
ENSG00000028839 TBPL1 -490053 sc-eQTL 2.77e-01 -0.0952 0.0873 0.318 Other_T L1
ENSG00000079950 STX7 948919 sc-eQTL 2.46e-01 0.0799 0.0687 0.318 Other_T L1
ENSG00000112303 VNN2 698658 sc-eQTL 3.71e-01 0.0745 0.0832 0.318 Other_T L1
ENSG00000112306 RPS12 647548 sc-eQTL 3.32e-01 -0.0321 0.033 0.318 Other_T L1
ENSG00000118515 SGK1 -855995 sc-eQTL 6.80e-01 0.0251 0.0608 0.318 Other_T L1
ENSG00000146409 SLC18B1 648778 sc-eQTL 4.92e-01 -0.0622 0.0903 0.318 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -490053 sc-eQTL 7.81e-01 0.028 0.101 0.311 B_Activated L2
ENSG00000079950 STX7 948919 sc-eQTL 4.53e-01 -0.0648 0.0861 0.311 B_Activated L2
ENSG00000112303 VNN2 698658 sc-eQTL 7.81e-02 0.161 0.0909 0.311 B_Activated L2
ENSG00000112306 RPS12 647548 sc-eQTL 9.13e-01 -0.00538 0.0492 0.311 B_Activated L2
ENSG00000118515 SGK1 -855995 sc-eQTL 1.32e-01 0.132 0.0871 0.311 B_Activated L2
ENSG00000146409 SLC18B1 648778 sc-eQTL 7.20e-01 -0.0309 0.0861 0.311 B_Activated L2
ENSG00000028839 TBPL1 -490053 sc-eQTL 8.62e-02 0.164 0.0954 0.318 B_Intermediate L2
ENSG00000079950 STX7 948919 sc-eQTL 1.37e-01 0.082 0.0549 0.318 B_Intermediate L2
ENSG00000112303 VNN2 698658 sc-eQTL 6.64e-01 -0.0362 0.0831 0.318 B_Intermediate L2
ENSG00000112306 RPS12 647548 sc-eQTL 4.66e-01 -0.0371 0.0509 0.318 B_Intermediate L2
ENSG00000118515 SGK1 -855995 sc-eQTL 6.03e-01 0.0458 0.088 0.318 B_Intermediate L2
ENSG00000146409 SLC18B1 648778 sc-eQTL 6.48e-01 0.0419 0.0917 0.318 B_Intermediate L2
ENSG00000028839 TBPL1 -490053 sc-eQTL 7.37e-01 -0.0312 0.0929 0.319 B_Memory L2
ENSG00000079950 STX7 948919 sc-eQTL 4.45e-02 0.135 0.0666 0.319 B_Memory L2
ENSG00000112303 VNN2 698658 sc-eQTL 4.48e-01 0.0667 0.0878 0.319 B_Memory L2
ENSG00000112306 RPS12 647548 sc-eQTL 5.73e-01 -0.0239 0.0423 0.319 B_Memory L2
ENSG00000118515 SGK1 -855995 sc-eQTL 2.20e-01 0.0953 0.0775 0.319 B_Memory L2
ENSG00000146409 SLC18B1 648778 sc-eQTL 1.95e-01 0.115 0.0881 0.319 B_Memory L2
ENSG00000028839 TBPL1 -490053 sc-eQTL 9.45e-01 0.006 0.0873 0.318 B_Naive1 L2
ENSG00000079950 STX7 948919 sc-eQTL 2.56e-01 0.0476 0.0418 0.318 B_Naive1 L2
ENSG00000112303 VNN2 698658 sc-eQTL 1.02e-01 -0.133 0.0809 0.318 B_Naive1 L2
ENSG00000112306 RPS12 647548 sc-eQTL 9.86e-01 0.000812 0.0464 0.318 B_Naive1 L2
ENSG00000118515 SGK1 -855995 sc-eQTL 8.31e-01 0.0155 0.0725 0.318 B_Naive1 L2
ENSG00000146409 SLC18B1 648778 sc-eQTL 3.16e-01 0.0897 0.0893 0.318 B_Naive1 L2
ENSG00000028839 TBPL1 -490053 sc-eQTL 7.25e-01 0.0327 0.0927 0.318 B_Naive2 L2
ENSG00000079950 STX7 948919 sc-eQTL 1.27e-01 0.0751 0.049 0.318 B_Naive2 L2
ENSG00000112303 VNN2 698658 sc-eQTL 8.58e-01 -0.0162 0.0904 0.318 B_Naive2 L2
ENSG00000112306 RPS12 647548 sc-eQTL 7.07e-01 0.018 0.0478 0.318 B_Naive2 L2
ENSG00000118515 SGK1 -855995 sc-eQTL 2.10e-01 0.106 0.0843 0.318 B_Naive2 L2
ENSG00000146409 SLC18B1 648778 sc-eQTL 6.00e-01 -0.0479 0.0913 0.318 B_Naive2 L2
ENSG00000028839 TBPL1 -490053 sc-eQTL 6.09e-02 0.172 0.0912 0.314 CD4_CTL L2
ENSG00000079950 STX7 948919 sc-eQTL 9.75e-01 0.00292 0.0914 0.314 CD4_CTL L2
ENSG00000112303 VNN2 698658 sc-eQTL 6.14e-01 0.0465 0.0922 0.314 CD4_CTL L2
ENSG00000112306 RPS12 647548 sc-eQTL 8.87e-01 0.00608 0.0426 0.314 CD4_CTL L2
ENSG00000118515 SGK1 -855995 sc-eQTL 5.23e-01 0.0472 0.0738 0.314 CD4_CTL L2
ENSG00000146409 SLC18B1 648778 sc-eQTL 3.20e-01 0.0854 0.0857 0.314 CD4_CTL L2
ENSG00000028839 TBPL1 -490053 sc-eQTL 3.80e-02 -0.154 0.0737 0.318 CD4_Naive L2
ENSG00000079950 STX7 948919 sc-eQTL 6.43e-01 0.0339 0.073 0.318 CD4_Naive L2
ENSG00000112303 VNN2 698658 sc-eQTL 4.35e-01 0.0529 0.0676 0.318 CD4_Naive L2
ENSG00000112306 RPS12 647548 sc-eQTL 6.87e-01 -0.0177 0.0439 0.318 CD4_Naive L2
ENSG00000118515 SGK1 -855995 sc-eQTL 6.18e-01 0.0268 0.0537 0.318 CD4_Naive L2
ENSG00000146409 SLC18B1 648778 sc-eQTL 6.63e-01 0.0369 0.0845 0.318 CD4_Naive L2
ENSG00000028839 TBPL1 -490053 sc-eQTL 3.08e-01 -0.0808 0.0791 0.318 CD4_TCM L2
ENSG00000079950 STX7 948919 sc-eQTL 5.76e-01 0.0447 0.0798 0.318 CD4_TCM L2
ENSG00000112303 VNN2 698658 sc-eQTL 9.95e-01 0.000482 0.0787 0.318 CD4_TCM L2
ENSG00000112306 RPS12 647548 sc-eQTL 1.71e-01 -0.0558 0.0406 0.318 CD4_TCM L2
ENSG00000118515 SGK1 -855995 sc-eQTL 4.32e-01 -0.0449 0.057 0.318 CD4_TCM L2
ENSG00000146409 SLC18B1 648778 sc-eQTL 2.36e-02 0.213 0.0933 0.318 CD4_TCM L2
ENSG00000028839 TBPL1 -490053 sc-eQTL 3.74e-01 0.0817 0.0918 0.318 CD4_TEM L2
ENSG00000079950 STX7 948919 sc-eQTL 6.76e-01 0.0386 0.092 0.318 CD4_TEM L2
ENSG00000112303 VNN2 698658 sc-eQTL 6.49e-01 0.0403 0.0883 0.318 CD4_TEM L2
ENSG00000112306 RPS12 647548 sc-eQTL 5.58e-01 -0.0212 0.0362 0.318 CD4_TEM L2
ENSG00000118515 SGK1 -855995 sc-eQTL 5.41e-01 -0.038 0.0622 0.318 CD4_TEM L2
ENSG00000146409 SLC18B1 648778 sc-eQTL 1.87e-01 0.119 0.0897 0.318 CD4_TEM L2
ENSG00000028839 TBPL1 -490053 sc-eQTL 8.97e-01 0.0106 0.082 0.318 CD8_CTL L2
ENSG00000079950 STX7 948919 sc-eQTL 1.18e-01 -0.12 0.0762 0.318 CD8_CTL L2
ENSG00000112303 VNN2 698658 sc-eQTL 8.94e-01 0.0116 0.0871 0.318 CD8_CTL L2
ENSG00000112306 RPS12 647548 sc-eQTL 8.39e-01 -0.00947 0.0466 0.318 CD8_CTL L2
ENSG00000118515 SGK1 -855995 sc-eQTL 3.95e-01 0.067 0.0786 0.318 CD8_CTL L2
ENSG00000146409 SLC18B1 648778 sc-eQTL 9.64e-01 0.00413 0.0903 0.318 CD8_CTL L2
ENSG00000028839 TBPL1 -490053 sc-eQTL 9.41e-01 -0.00649 0.0874 0.318 CD8_Naive L2
ENSG00000079950 STX7 948919 sc-eQTL 6.81e-01 0.0383 0.0931 0.318 CD8_Naive L2
ENSG00000112303 VNN2 698658 sc-eQTL 2.57e-01 -0.0912 0.0801 0.318 CD8_Naive L2
ENSG00000112306 RPS12 647548 sc-eQTL 8.93e-01 -0.00617 0.046 0.318 CD8_Naive L2
ENSG00000118515 SGK1 -855995 sc-eQTL 6.25e-01 -0.0283 0.0577 0.318 CD8_Naive L2
ENSG00000146409 SLC18B1 648778 sc-eQTL 5.59e-01 0.054 0.0922 0.318 CD8_Naive L2
ENSG00000028839 TBPL1 -490053 sc-eQTL 2.39e-01 -0.114 0.0969 0.319 CD8_TCM L2
ENSG00000079950 STX7 948919 sc-eQTL 2.60e-01 0.101 0.0898 0.319 CD8_TCM L2
ENSG00000112303 VNN2 698658 sc-eQTL 8.07e-01 -0.0219 0.0894 0.319 CD8_TCM L2
ENSG00000112306 RPS12 647548 sc-eQTL 1.18e-01 -0.068 0.0433 0.319 CD8_TCM L2
ENSG00000118515 SGK1 -855995 sc-eQTL 4.61e-02 0.143 0.0714 0.319 CD8_TCM L2
ENSG00000146409 SLC18B1 648778 sc-eQTL 9.89e-01 -0.00126 0.0955 0.319 CD8_TCM L2
ENSG00000028839 TBPL1 -490053 sc-eQTL 8.85e-01 0.013 0.0899 0.322 CD8_TEM L2
ENSG00000079950 STX7 948919 sc-eQTL 3.13e-01 -0.0991 0.0979 0.322 CD8_TEM L2
ENSG00000112303 VNN2 698658 sc-eQTL 6.59e-02 0.179 0.0968 0.322 CD8_TEM L2
ENSG00000112306 RPS12 647548 sc-eQTL 6.94e-02 0.095 0.0521 0.322 CD8_TEM L2
ENSG00000118515 SGK1 -855995 sc-eQTL 8.96e-01 0.0113 0.086 0.322 CD8_TEM L2
ENSG00000146409 SLC18B1 648778 sc-eQTL 6.11e-02 0.185 0.0984 0.322 CD8_TEM L2
ENSG00000028839 TBPL1 -490053 sc-eQTL 2.88e-01 -0.0981 0.0921 0.316 MAIT L2
ENSG00000079950 STX7 948919 sc-eQTL 6.51e-01 -0.0397 0.0877 0.316 MAIT L2
ENSG00000112303 VNN2 698658 sc-eQTL 5.73e-01 0.0503 0.0892 0.316 MAIT L2
ENSG00000112306 RPS12 647548 sc-eQTL 3.57e-02 -0.0918 0.0434 0.316 MAIT L2
ENSG00000118515 SGK1 -855995 sc-eQTL 5.67e-01 0.0354 0.0617 0.316 MAIT L2
ENSG00000146409 SLC18B1 648778 sc-eQTL 4.08e-01 -0.0762 0.0919 0.316 MAIT L2
ENSG00000028839 TBPL1 -490053 sc-eQTL 5.74e-01 -0.0559 0.0994 0.313 NK_CD56bright L2
ENSG00000079950 STX7 948919 sc-eQTL 5.58e-01 -0.054 0.0921 0.313 NK_CD56bright L2
ENSG00000112303 VNN2 698658 sc-eQTL 6.03e-01 -0.0487 0.0936 0.313 NK_CD56bright L2
ENSG00000112306 RPS12 647548 sc-eQTL 7.42e-01 -0.0172 0.0522 0.313 NK_CD56bright L2
ENSG00000118515 SGK1 -855995 sc-eQTL 4.78e-01 -0.0553 0.0779 0.313 NK_CD56bright L2
ENSG00000028839 TBPL1 -490053 sc-eQTL 7.03e-01 0.0304 0.0796 0.317 NK_CD56dim L2
ENSG00000079950 STX7 948919 sc-eQTL 7.18e-01 -0.0263 0.0728 0.317 NK_CD56dim L2
ENSG00000112303 VNN2 698658 sc-eQTL 8.16e-02 -0.158 0.0905 0.317 NK_CD56dim L2
ENSG00000112306 RPS12 647548 sc-eQTL 2.06e-01 -0.0457 0.036 0.317 NK_CD56dim L2
ENSG00000118515 SGK1 -855995 sc-eQTL 7.79e-01 0.0225 0.0801 0.317 NK_CD56dim L2
ENSG00000028839 TBPL1 -490053 sc-eQTL 8.52e-01 0.0186 0.0994 0.315 NK_HLA L2
ENSG00000079950 STX7 948919 sc-eQTL 7.29e-01 0.0313 0.0904 0.315 NK_HLA L2
ENSG00000112303 VNN2 698658 sc-eQTL 6.75e-01 -0.0385 0.0915 0.315 NK_HLA L2
ENSG00000112306 RPS12 647548 sc-eQTL 2.24e-01 -0.0518 0.0425 0.315 NK_HLA L2
ENSG00000118515 SGK1 -855995 sc-eQTL 2.85e-01 0.0901 0.084 0.315 NK_HLA L2
ENSG00000028839 TBPL1 -490053 sc-eQTL 9.11e-01 0.00921 0.0821 0.317 NK_cytokine L2
ENSG00000079950 STX7 948919 sc-eQTL 1.29e-01 0.121 0.0791 0.317 NK_cytokine L2
ENSG00000112303 VNN2 698658 sc-eQTL 6.40e-01 -0.0419 0.0893 0.317 NK_cytokine L2
ENSG00000112306 RPS12 647548 sc-eQTL 7.16e-01 -0.0177 0.0485 0.317 NK_cytokine L2
ENSG00000118515 SGK1 -855995 sc-eQTL 3.91e-01 -0.0693 0.0806 0.317 NK_cytokine L2
ENSG00000028839 TBPL1 -490053 sc-eQTL 9.34e-01 -0.00915 0.11 0.315 PB L2
ENSG00000079950 STX7 948919 sc-eQTL 3.70e-01 -0.0705 0.0783 0.315 PB L2
ENSG00000112303 VNN2 698658 sc-eQTL 5.09e-01 -0.0635 0.0959 0.315 PB L2
ENSG00000112306 RPS12 647548 sc-eQTL 2.32e-01 -0.0651 0.0542 0.315 PB L2
ENSG00000118515 SGK1 -855995 sc-eQTL 8.13e-01 0.0209 0.0881 0.315 PB L2
ENSG00000146409 SLC18B1 648778 sc-eQTL 8.88e-01 -0.0145 0.102 0.315 PB L2
ENSG00000028839 TBPL1 -490053 sc-eQTL 9.86e-01 0.0017 0.0937 0.32 Pro_T L2
ENSG00000079950 STX7 948919 sc-eQTL 6.88e-02 0.152 0.083 0.32 Pro_T L2
ENSG00000112303 VNN2 698658 sc-eQTL 9.37e-01 -0.00713 0.0898 0.32 Pro_T L2
ENSG00000112306 RPS12 647548 sc-eQTL 6.19e-01 -0.0169 0.0339 0.32 Pro_T L2
ENSG00000118515 SGK1 -855995 sc-eQTL 6.33e-01 0.0325 0.0681 0.32 Pro_T L2
ENSG00000146409 SLC18B1 648778 sc-eQTL 9.68e-01 0.00358 0.0879 0.32 Pro_T L2
ENSG00000028839 TBPL1 -490053 sc-eQTL 5.96e-01 -0.0502 0.0944 0.318 Treg L2
ENSG00000079950 STX7 948919 sc-eQTL 4.84e-01 0.0624 0.089 0.318 Treg L2
ENSG00000112303 VNN2 698658 sc-eQTL 5.20e-01 0.0482 0.0749 0.318 Treg L2
ENSG00000112306 RPS12 647548 sc-eQTL 5.67e-01 0.019 0.0331 0.318 Treg L2
ENSG00000118515 SGK1 -855995 sc-eQTL 7.96e-01 0.0181 0.0698 0.318 Treg L2
ENSG00000146409 SLC18B1 648778 sc-eQTL 8.50e-01 -0.0178 0.0936 0.318 Treg L2
ENSG00000028839 TBPL1 -490053 sc-eQTL 9.29e-01 0.00888 0.0992 0.322 cDC L2
ENSG00000079950 STX7 948919 sc-eQTL 7.47e-01 0.0251 0.0779 0.322 cDC L2
ENSG00000093134 VNN3 727352 sc-eQTL 7.82e-01 -0.0214 0.0774 0.322 cDC L2
ENSG00000112299 VNN1 748062 sc-eQTL 3.87e-01 0.0787 0.0908 0.322 cDC L2
ENSG00000112303 VNN2 698658 sc-eQTL 8.91e-01 0.0121 0.0886 0.322 cDC L2
ENSG00000112306 RPS12 647548 sc-eQTL 8.11e-01 -0.0105 0.0437 0.322 cDC L2
ENSG00000118515 SGK1 -855995 sc-eQTL 3.32e-01 0.0716 0.0735 0.322 cDC L2
ENSG00000146409 SLC18B1 648778 sc-eQTL 5.28e-01 0.0548 0.0866 0.322 cDC L2
ENSG00000286438 AL591115.1 358989 sc-eQTL 6.39e-01 -0.0325 0.0692 0.322 cDC L2
ENSG00000286887 AL355881.1 -834184 sc-eQTL 3.29e-01 0.0832 0.085 0.322 cDC L2
ENSG00000028839 TBPL1 -490053 sc-eQTL 7.07e-01 0.029 0.0769 0.318 cMono_IL1B L2
ENSG00000079950 STX7 948919 sc-eQTL 7.48e-01 0.0188 0.0584 0.318 cMono_IL1B L2
ENSG00000093134 VNN3 727352 sc-eQTL 2.87e-01 -0.0878 0.0823 0.318 cMono_IL1B L2
ENSG00000112299 VNN1 748062 sc-eQTL 2.52e-01 0.0954 0.083 0.318 cMono_IL1B L2
ENSG00000112303 VNN2 698658 sc-eQTL 9.72e-01 -0.00238 0.0666 0.318 cMono_IL1B L2
ENSG00000112306 RPS12 647548 sc-eQTL 4.92e-01 -0.0254 0.0369 0.318 cMono_IL1B L2
ENSG00000118515 SGK1 -855995 sc-eQTL 7.12e-01 0.0204 0.0551 0.318 cMono_IL1B L2
ENSG00000146409 SLC18B1 648778 sc-eQTL 6.30e-01 -0.0344 0.0713 0.318 cMono_IL1B L2
ENSG00000286887 AL355881.1 -834184 sc-eQTL 8.65e-01 0.0127 0.0743 0.318 cMono_IL1B L2
ENSG00000028839 TBPL1 -490053 sc-eQTL 8.16e-01 -0.0204 0.0872 0.318 cMono_S100A L2
ENSG00000079950 STX7 948919 sc-eQTL 4.88e-02 0.124 0.0624 0.318 cMono_S100A L2
ENSG00000093134 VNN3 727352 sc-eQTL 4.16e-02 -0.16 0.0779 0.318 cMono_S100A L2
ENSG00000112299 VNN1 748062 sc-eQTL 8.42e-02 0.147 0.0848 0.318 cMono_S100A L2
ENSG00000112303 VNN2 698658 sc-eQTL 7.65e-01 -0.0168 0.0559 0.318 cMono_S100A L2
ENSG00000112306 RPS12 647548 sc-eQTL 7.10e-01 -0.015 0.0403 0.318 cMono_S100A L2
ENSG00000118515 SGK1 -855995 sc-eQTL 1.68e-01 0.0635 0.0459 0.318 cMono_S100A L2
ENSG00000146409 SLC18B1 648778 sc-eQTL 2.93e-01 -0.0784 0.0744 0.318 cMono_S100A L2
ENSG00000286887 AL355881.1 -834184 sc-eQTL 5.41e-01 -0.0446 0.0729 0.318 cMono_S100A L2
ENSG00000028839 TBPL1 -490053 sc-eQTL 6.19e-01 0.0592 0.119 0.315 gdT L2
ENSG00000079950 STX7 948919 sc-eQTL 1.46e-02 0.248 0.1 0.315 gdT L2
ENSG00000112303 VNN2 698658 sc-eQTL 2.00e-01 -0.145 0.113 0.315 gdT L2
ENSG00000112306 RPS12 647548 sc-eQTL 7.06e-01 -0.0163 0.0431 0.315 gdT L2
ENSG00000118515 SGK1 -855995 sc-eQTL 7.00e-03 0.217 0.0793 0.315 gdT L2
ENSG00000146409 SLC18B1 648778 sc-eQTL 6.18e-01 0.0556 0.111 0.315 gdT L2
ENSG00000028839 TBPL1 -490053 sc-eQTL 7.98e-01 0.023 0.0897 0.324 intMono L2
ENSG00000079950 STX7 948919 sc-eQTL 6.65e-01 -0.0372 0.0857 0.324 intMono L2
ENSG00000093134 VNN3 727352 sc-eQTL 5.90e-02 -0.163 0.0858 0.324 intMono L2
ENSG00000112299 VNN1 748062 sc-eQTL 7.14e-02 0.154 0.0849 0.324 intMono L2
ENSG00000112303 VNN2 698658 sc-eQTL 7.34e-01 0.0296 0.0869 0.324 intMono L2
ENSG00000112306 RPS12 647548 sc-eQTL 2.72e-01 -0.0415 0.0377 0.324 intMono L2
ENSG00000118515 SGK1 -855995 sc-eQTL 9.06e-01 -0.00748 0.0635 0.324 intMono L2
ENSG00000146409 SLC18B1 648778 sc-eQTL 3.27e-01 0.0903 0.0919 0.324 intMono L2
ENSG00000286887 AL355881.1 -834184 sc-eQTL 7.34e-01 0.0299 0.0881 0.324 intMono L2
ENSG00000028839 TBPL1 -490053 sc-eQTL 8.29e-01 0.0206 0.0953 0.319 ncMono L2
ENSG00000079950 STX7 948919 sc-eQTL 4.38e-01 -0.05 0.0643 0.319 ncMono L2
ENSG00000093134 VNN3 727352 sc-eQTL 8.69e-01 0.0151 0.0909 0.319 ncMono L2
ENSG00000112299 VNN1 748062 sc-eQTL 3.14e-01 0.091 0.0901 0.319 ncMono L2
ENSG00000112303 VNN2 698658 sc-eQTL 3.79e-01 0.0764 0.0866 0.319 ncMono L2
ENSG00000112306 RPS12 647548 sc-eQTL 7.84e-01 -0.012 0.0435 0.319 ncMono L2
ENSG00000118515 SGK1 -855995 sc-eQTL 8.25e-03 0.161 0.0605 0.319 ncMono L2
ENSG00000146409 SLC18B1 648778 sc-eQTL 6.59e-01 -0.0339 0.0769 0.319 ncMono L2
ENSG00000286887 AL355881.1 -834184 sc-eQTL 3.76e-02 0.168 0.0804 0.319 ncMono L2
ENSG00000028839 TBPL1 -490053 sc-eQTL 3.94e-01 -0.0944 0.11 0.322 pDC L2
ENSG00000079950 STX7 948919 sc-eQTL 6.77e-01 -0.0307 0.0737 0.322 pDC L2
ENSG00000093134 VNN3 727352 sc-eQTL 5.15e-01 -0.0484 0.0741 0.322 pDC L2
ENSG00000112299 VNN1 748062 sc-eQTL 1.23e-01 0.116 0.0749 0.322 pDC L2
ENSG00000112303 VNN2 698658 sc-eQTL 2.92e-01 -0.0946 0.0896 0.322 pDC L2
ENSG00000112306 RPS12 647548 sc-eQTL 8.55e-01 -0.0113 0.0619 0.322 pDC L2
ENSG00000118515 SGK1 -855995 sc-eQTL 5.05e-01 0.0419 0.0628 0.322 pDC L2
ENSG00000146409 SLC18B1 648778 sc-eQTL 1.79e-02 -0.215 0.09 0.322 pDC L2
ENSG00000286438 AL591115.1 358989 sc-eQTL 7.48e-01 0.0282 0.0877 0.322 pDC L2
ENSG00000286887 AL355881.1 -834184 sc-eQTL 5.23e-01 0.0498 0.0777 0.322 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -490053 sc-eQTL 9.01e-02 0.16 0.0941 0.318 B_Memory LOneK1K
ENSG00000079950 STX7 948919 sc-eQTL 9.48e-02 0.0869 0.0518 0.318 B_Memory LOneK1K
ENSG00000112303 VNN2 698658 sc-eQTL 3.13e-01 0.0832 0.0823 0.318 B_Memory LOneK1K
ENSG00000112306 RPS12 647548 sc-eQTL 9.07e-01 -0.00549 0.047 0.318 B_Memory LOneK1K
ENSG00000118515 SGK1 -855995 sc-eQTL 1.91e-01 0.0959 0.0732 0.318 B_Memory LOneK1K
ENSG00000146409 SLC18B1 648778 sc-eQTL 1.08e-01 0.139 0.0857 0.318 B_Memory LOneK1K
ENSG00000028839 TBPL1 -490053 sc-eQTL 7.28e-01 0.0304 0.0871 0.318 B_Naive LOneK1K
ENSG00000079950 STX7 948919 sc-eQTL 1.02e-01 0.0641 0.039 0.318 B_Naive LOneK1K
ENSG00000112303 VNN2 698658 sc-eQTL 2.14e-01 -0.0947 0.076 0.318 B_Naive LOneK1K
ENSG00000112306 RPS12 647548 sc-eQTL 8.88e-01 0.00649 0.0461 0.318 B_Naive LOneK1K
ENSG00000118515 SGK1 -855995 sc-eQTL 6.48e-01 0.0326 0.0714 0.318 B_Naive LOneK1K
ENSG00000146409 SLC18B1 648778 sc-eQTL 6.96e-01 0.034 0.087 0.318 B_Naive LOneK1K
ENSG00000028839 TBPL1 -490053 sc-eQTL 9.94e-01 -0.000517 0.07 0.318 CD14_Mono LOneK1K
ENSG00000079950 STX7 948919 sc-eQTL 2.51e-01 0.0559 0.0485 0.318 CD14_Mono LOneK1K
ENSG00000093134 VNN3 727352 sc-eQTL 9.18e-02 -0.134 0.0788 0.318 CD14_Mono LOneK1K
ENSG00000112299 VNN1 748062 sc-eQTL 7.63e-02 0.146 0.0822 0.318 CD14_Mono LOneK1K
ENSG00000112303 VNN2 698658 sc-eQTL 9.19e-01 -0.00557 0.0547 0.318 CD14_Mono LOneK1K
ENSG00000112306 RPS12 647548 sc-eQTL 4.59e-01 -0.0278 0.0375 0.318 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -855995 sc-eQTL 5.92e-01 0.0274 0.0511 0.318 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 648778 sc-eQTL 3.30e-01 -0.0651 0.0666 0.318 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -834184 sc-eQTL 7.84e-01 -0.0193 0.07 0.318 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -490053 sc-eQTL 9.86e-01 0.00165 0.0918 0.319 CD16_Mono LOneK1K
ENSG00000079950 STX7 948919 sc-eQTL 1.30e-01 -0.0915 0.0602 0.319 CD16_Mono LOneK1K
ENSG00000093134 VNN3 727352 sc-eQTL 1.78e-01 -0.12 0.0887 0.319 CD16_Mono LOneK1K
ENSG00000112299 VNN1 748062 sc-eQTL 1.83e-01 0.117 0.0879 0.319 CD16_Mono LOneK1K
ENSG00000112303 VNN2 698658 sc-eQTL 2.19e-01 0.102 0.083 0.319 CD16_Mono LOneK1K
ENSG00000112306 RPS12 647548 sc-eQTL 7.10e-01 -0.0132 0.0353 0.319 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -855995 sc-eQTL 1.68e-01 0.0737 0.0532 0.319 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 648778 sc-eQTL 9.99e-01 -0.00014 0.0858 0.319 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -834184 sc-eQTL 2.52e-01 0.0889 0.0773 0.319 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -490053 sc-eQTL 4.73e-01 0.0528 0.0735 0.317 NK_CD56dim LOneK1K
ENSG00000079950 STX7 948919 sc-eQTL 7.99e-01 0.0176 0.0692 0.317 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 698658 sc-eQTL 1.57e-01 -0.124 0.0871 0.317 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 647548 sc-eQTL 1.19e-01 -0.0556 0.0355 0.317 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -855995 sc-eQTL 7.84e-01 -0.0202 0.0738 0.317 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079950 STX7 948919 eQTL 0.00247 0.051 0.0168 0.0 0.0 0.308
ENSG00000112299 VNN1 748062 pQTL 0.000286 0.135 0.037 0.0 0.0 0.324
ENSG00000112303 VNN2 698658 eQTL 0.0139 0.0339 0.0137 0.0 0.0 0.308
ENSG00000146409 SLC18B1 648778 eQTL 0.00643 0.0645 0.0236 0.0 0.0 0.308

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina