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Genes within 1Mb (chr6:133461237:T:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -490933 sc-eQTL 5.00e-01 0.0589 0.0871 0.316 B L1
ENSG00000079950 STX7 948039 sc-eQTL 1.81e-01 0.0464 0.0346 0.316 B L1
ENSG00000112303 VNN2 697778 sc-eQTL 6.32e-01 -0.0313 0.0653 0.316 B L1
ENSG00000112306 RPS12 646668 sc-eQTL 7.03e-01 -0.0151 0.0395 0.316 B L1
ENSG00000118515 SGK1 -856875 sc-eQTL 9.00e-01 0.00764 0.0609 0.316 B L1
ENSG00000146409 SLC18B1 647898 sc-eQTL 3.97e-01 0.0704 0.083 0.316 B L1
ENSG00000028839 TBPL1 -490933 sc-eQTL 2.24e-01 -0.0784 0.0644 0.316 CD4T L1
ENSG00000079950 STX7 948039 sc-eQTL 3.89e-01 0.0578 0.067 0.316 CD4T L1
ENSG00000112303 VNN2 697778 sc-eQTL 2.60e-01 0.0655 0.058 0.316 CD4T L1
ENSG00000112306 RPS12 646668 sc-eQTL 5.44e-01 -0.024 0.0395 0.316 CD4T L1
ENSG00000118515 SGK1 -856875 sc-eQTL 6.62e-01 -0.0232 0.0531 0.316 CD4T L1
ENSG00000146409 SLC18B1 647898 sc-eQTL 2.90e-01 0.0847 0.0798 0.316 CD4T L1
ENSG00000028839 TBPL1 -490933 sc-eQTL 6.46e-01 -0.0294 0.0639 0.316 CD8T L1
ENSG00000079950 STX7 948039 sc-eQTL 1.66e-01 -0.0925 0.0665 0.316 CD8T L1
ENSG00000112303 VNN2 697778 sc-eQTL 9.42e-01 -0.00571 0.078 0.316 CD8T L1
ENSG00000112306 RPS12 646668 sc-eQTL 3.03e-01 -0.0274 0.0266 0.316 CD8T L1
ENSG00000118515 SGK1 -856875 sc-eQTL 9.07e-01 0.00481 0.0411 0.316 CD8T L1
ENSG00000146409 SLC18B1 647898 sc-eQTL 3.05e-01 0.0827 0.0804 0.316 CD8T L1
ENSG00000028839 TBPL1 -490933 sc-eQTL 7.94e-01 0.0254 0.097 0.324 DC L1
ENSG00000079950 STX7 948039 sc-eQTL 8.46e-01 -0.0117 0.0603 0.324 DC L1
ENSG00000093134 VNN3 726472 sc-eQTL 9.23e-01 0.00725 0.0747 0.324 DC L1
ENSG00000112299 VNN1 747182 sc-eQTL 2.85e-01 0.0863 0.0804 0.324 DC L1
ENSG00000112303 VNN2 697778 sc-eQTL 6.57e-01 -0.0383 0.0863 0.324 DC L1
ENSG00000112306 RPS12 646668 sc-eQTL 3.23e-01 -0.0478 0.0483 0.324 DC L1
ENSG00000118515 SGK1 -856875 sc-eQTL 9.04e-01 -0.00677 0.0562 0.324 DC L1
ENSG00000146409 SLC18B1 647898 sc-eQTL 1.83e-01 -0.102 0.0762 0.324 DC L1
ENSG00000286438 AL591115.1 358109 sc-eQTL 2.94e-01 0.0732 0.0695 0.324 DC L1
ENSG00000286887 AL355881.1 -835064 sc-eQTL 3.84e-01 0.0757 0.0867 0.324 DC L1
ENSG00000028839 TBPL1 -490933 sc-eQTL 9.20e-01 0.00675 0.0674 0.316 Mono L1
ENSG00000079950 STX7 948039 sc-eQTL 4.23e-01 0.0362 0.045 0.316 Mono L1
ENSG00000093134 VNN3 726472 sc-eQTL 5.27e-02 -0.149 0.0767 0.316 Mono L1
ENSG00000112299 VNN1 747182 sc-eQTL 1.34e-01 0.125 0.0828 0.316 Mono L1
ENSG00000112303 VNN2 697778 sc-eQTL 8.34e-01 -0.0123 0.0588 0.316 Mono L1
ENSG00000112306 RPS12 646668 sc-eQTL 3.51e-01 -0.0328 0.0351 0.316 Mono L1
ENSG00000118515 SGK1 -856875 sc-eQTL 5.22e-01 0.0318 0.0497 0.316 Mono L1
ENSG00000146409 SLC18B1 647898 sc-eQTL 3.55e-01 -0.0644 0.0695 0.316 Mono L1
ENSG00000286887 AL355881.1 -835064 sc-eQTL 9.21e-01 0.00683 0.0685 0.316 Mono L1
ENSG00000028839 TBPL1 -490933 sc-eQTL 5.20e-01 0.0478 0.0743 0.315 NK L1
ENSG00000079950 STX7 948039 sc-eQTL 8.33e-01 0.0145 0.0687 0.315 NK L1
ENSG00000112303 VNN2 697778 sc-eQTL 2.42e-01 -0.1 0.0853 0.315 NK L1
ENSG00000112306 RPS12 646668 sc-eQTL 8.12e-02 -0.0616 0.0351 0.315 NK L1
ENSG00000118515 SGK1 -856875 sc-eQTL 3.94e-01 -0.0558 0.0653 0.315 NK L1
ENSG00000028839 TBPL1 -490933 sc-eQTL 2.72e-01 -0.0961 0.0872 0.316 Other_T L1
ENSG00000079950 STX7 948039 sc-eQTL 2.54e-01 0.0784 0.0686 0.316 Other_T L1
ENSG00000112303 VNN2 697778 sc-eQTL 4.21e-01 0.0671 0.0831 0.316 Other_T L1
ENSG00000112306 RPS12 646668 sc-eQTL 2.41e-01 -0.0387 0.0329 0.316 Other_T L1
ENSG00000118515 SGK1 -856875 sc-eQTL 6.41e-01 0.0284 0.0607 0.316 Other_T L1
ENSG00000146409 SLC18B1 647898 sc-eQTL 6.10e-01 -0.0461 0.0903 0.316 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -490933 sc-eQTL 6.48e-01 0.0459 0.1 0.309 B_Activated L2
ENSG00000079950 STX7 948039 sc-eQTL 4.56e-01 -0.0642 0.0859 0.309 B_Activated L2
ENSG00000112303 VNN2 697778 sc-eQTL 8.11e-02 0.159 0.0908 0.309 B_Activated L2
ENSG00000112306 RPS12 646668 sc-eQTL 9.49e-01 -0.00314 0.0491 0.309 B_Activated L2
ENSG00000118515 SGK1 -856875 sc-eQTL 1.70e-01 0.12 0.087 0.309 B_Activated L2
ENSG00000146409 SLC18B1 647898 sc-eQTL 7.57e-01 -0.0266 0.0859 0.309 B_Activated L2
ENSG00000028839 TBPL1 -490933 sc-eQTL 1.06e-01 0.155 0.0955 0.315 B_Intermediate L2
ENSG00000079950 STX7 948039 sc-eQTL 1.46e-01 0.0801 0.0549 0.315 B_Intermediate L2
ENSG00000112303 VNN2 697778 sc-eQTL 6.94e-01 -0.0327 0.0831 0.315 B_Intermediate L2
ENSG00000112306 RPS12 646668 sc-eQTL 4.92e-01 -0.035 0.0508 0.315 B_Intermediate L2
ENSG00000118515 SGK1 -856875 sc-eQTL 5.82e-01 0.0485 0.088 0.315 B_Intermediate L2
ENSG00000146409 SLC18B1 647898 sc-eQTL 5.50e-01 0.0549 0.0916 0.315 B_Intermediate L2
ENSG00000028839 TBPL1 -490933 sc-eQTL 6.21e-01 -0.046 0.0927 0.317 B_Memory L2
ENSG00000079950 STX7 948039 sc-eQTL 7.20e-02 0.12 0.0666 0.317 B_Memory L2
ENSG00000112303 VNN2 697778 sc-eQTL 4.09e-01 0.0725 0.0877 0.317 B_Memory L2
ENSG00000112306 RPS12 646668 sc-eQTL 5.40e-01 -0.0259 0.0423 0.317 B_Memory L2
ENSG00000118515 SGK1 -856875 sc-eQTL 3.12e-01 0.0785 0.0774 0.317 B_Memory L2
ENSG00000146409 SLC18B1 647898 sc-eQTL 2.68e-01 0.0979 0.088 0.317 B_Memory L2
ENSG00000028839 TBPL1 -490933 sc-eQTL 9.67e-01 -0.00365 0.0871 0.316 B_Naive1 L2
ENSG00000079950 STX7 948039 sc-eQTL 2.53e-01 0.0478 0.0417 0.316 B_Naive1 L2
ENSG00000112303 VNN2 697778 sc-eQTL 1.40e-01 -0.12 0.0808 0.316 B_Naive1 L2
ENSG00000112306 RPS12 646668 sc-eQTL 9.71e-01 0.00169 0.0463 0.316 B_Naive1 L2
ENSG00000118515 SGK1 -856875 sc-eQTL 6.99e-01 0.028 0.0724 0.316 B_Naive1 L2
ENSG00000146409 SLC18B1 647898 sc-eQTL 2.99e-01 0.0927 0.0891 0.316 B_Naive1 L2
ENSG00000028839 TBPL1 -490933 sc-eQTL 8.47e-01 0.0178 0.0925 0.315 B_Naive2 L2
ENSG00000079950 STX7 948039 sc-eQTL 1.48e-01 0.071 0.0489 0.315 B_Naive2 L2
ENSG00000112303 VNN2 697778 sc-eQTL 9.39e-01 -0.00691 0.0902 0.315 B_Naive2 L2
ENSG00000112306 RPS12 646668 sc-eQTL 6.98e-01 0.0186 0.0478 0.315 B_Naive2 L2
ENSG00000118515 SGK1 -856875 sc-eQTL 1.75e-01 0.115 0.084 0.315 B_Naive2 L2
ENSG00000146409 SLC18B1 647898 sc-eQTL 6.03e-01 -0.0474 0.0911 0.315 B_Naive2 L2
ENSG00000028839 TBPL1 -490933 sc-eQTL 5.89e-02 0.173 0.0912 0.311 CD4_CTL L2
ENSG00000079950 STX7 948039 sc-eQTL 9.92e-01 -0.000947 0.0914 0.311 CD4_CTL L2
ENSG00000112303 VNN2 697778 sc-eQTL 5.22e-01 0.0591 0.0921 0.311 CD4_CTL L2
ENSG00000112306 RPS12 646668 sc-eQTL 9.60e-01 0.00215 0.0426 0.311 CD4_CTL L2
ENSG00000118515 SGK1 -856875 sc-eQTL 4.75e-01 0.0527 0.0737 0.311 CD4_CTL L2
ENSG00000146409 SLC18B1 647898 sc-eQTL 2.99e-01 0.0892 0.0856 0.311 CD4_CTL L2
ENSG00000028839 TBPL1 -490933 sc-eQTL 4.79e-02 -0.147 0.0737 0.316 CD4_Naive L2
ENSG00000079950 STX7 948039 sc-eQTL 5.22e-01 0.0467 0.0729 0.316 CD4_Naive L2
ENSG00000112303 VNN2 697778 sc-eQTL 4.00e-01 0.0569 0.0674 0.316 CD4_Naive L2
ENSG00000112306 RPS12 646668 sc-eQTL 7.13e-01 -0.0161 0.0438 0.316 CD4_Naive L2
ENSG00000118515 SGK1 -856875 sc-eQTL 7.33e-01 0.0183 0.0537 0.316 CD4_Naive L2
ENSG00000146409 SLC18B1 647898 sc-eQTL 6.17e-01 0.0422 0.0843 0.316 CD4_Naive L2
ENSG00000028839 TBPL1 -490933 sc-eQTL 2.95e-01 -0.083 0.079 0.316 CD4_TCM L2
ENSG00000079950 STX7 948039 sc-eQTL 5.38e-01 0.0491 0.0797 0.316 CD4_TCM L2
ENSG00000112303 VNN2 697778 sc-eQTL 9.96e-01 -0.000349 0.0786 0.316 CD4_TCM L2
ENSG00000112306 RPS12 646668 sc-eQTL 1.45e-01 -0.0594 0.0405 0.316 CD4_TCM L2
ENSG00000118515 SGK1 -856875 sc-eQTL 4.27e-01 -0.0454 0.0569 0.316 CD4_TCM L2
ENSG00000146409 SLC18B1 647898 sc-eQTL 2.39e-02 0.212 0.0932 0.316 CD4_TCM L2
ENSG00000028839 TBPL1 -490933 sc-eQTL 3.95e-01 0.0782 0.0918 0.316 CD4_TEM L2
ENSG00000079950 STX7 948039 sc-eQTL 6.28e-01 0.0447 0.092 0.316 CD4_TEM L2
ENSG00000112303 VNN2 697778 sc-eQTL 6.27e-01 0.043 0.0883 0.316 CD4_TEM L2
ENSG00000112306 RPS12 646668 sc-eQTL 5.31e-01 -0.0227 0.0362 0.316 CD4_TEM L2
ENSG00000118515 SGK1 -856875 sc-eQTL 5.17e-01 -0.0404 0.0622 0.316 CD4_TEM L2
ENSG00000146409 SLC18B1 647898 sc-eQTL 1.77e-01 0.121 0.0897 0.316 CD4_TEM L2
ENSG00000028839 TBPL1 -490933 sc-eQTL 9.27e-01 0.00748 0.0819 0.316 CD8_CTL L2
ENSG00000079950 STX7 948039 sc-eQTL 9.10e-02 -0.129 0.076 0.316 CD8_CTL L2
ENSG00000112303 VNN2 697778 sc-eQTL 9.11e-01 0.00972 0.0869 0.316 CD8_CTL L2
ENSG00000112306 RPS12 646668 sc-eQTL 7.76e-01 -0.0133 0.0465 0.316 CD8_CTL L2
ENSG00000118515 SGK1 -856875 sc-eQTL 3.93e-01 0.0672 0.0785 0.316 CD8_CTL L2
ENSG00000146409 SLC18B1 647898 sc-eQTL 9.93e-01 0.000749 0.0902 0.316 CD8_CTL L2
ENSG00000028839 TBPL1 -490933 sc-eQTL 9.23e-01 0.00841 0.0874 0.316 CD8_Naive L2
ENSG00000079950 STX7 948039 sc-eQTL 6.07e-01 0.0479 0.093 0.316 CD8_Naive L2
ENSG00000112303 VNN2 697778 sc-eQTL 3.03e-01 -0.0827 0.0801 0.316 CD8_Naive L2
ENSG00000112306 RPS12 646668 sc-eQTL 9.22e-01 -0.0045 0.046 0.316 CD8_Naive L2
ENSG00000118515 SGK1 -856875 sc-eQTL 5.31e-01 -0.0362 0.0577 0.316 CD8_Naive L2
ENSG00000146409 SLC18B1 647898 sc-eQTL 6.88e-01 0.0371 0.0922 0.316 CD8_Naive L2
ENSG00000028839 TBPL1 -490933 sc-eQTL 2.20e-01 -0.119 0.0968 0.317 CD8_TCM L2
ENSG00000079950 STX7 948039 sc-eQTL 2.70e-01 0.0991 0.0897 0.317 CD8_TCM L2
ENSG00000112303 VNN2 697778 sc-eQTL 7.69e-01 -0.0262 0.0893 0.317 CD8_TCM L2
ENSG00000112306 RPS12 646668 sc-eQTL 1.33e-01 -0.0653 0.0433 0.317 CD8_TCM L2
ENSG00000118515 SGK1 -856875 sc-eQTL 7.09e-02 0.13 0.0715 0.317 CD8_TCM L2
ENSG00000146409 SLC18B1 647898 sc-eQTL 8.50e-01 -0.018 0.0954 0.317 CD8_TCM L2
ENSG00000028839 TBPL1 -490933 sc-eQTL 8.30e-01 0.0193 0.0898 0.32 CD8_TEM L2
ENSG00000079950 STX7 948039 sc-eQTL 3.80e-01 -0.0861 0.0978 0.32 CD8_TEM L2
ENSG00000112303 VNN2 697778 sc-eQTL 4.85e-02 0.192 0.0965 0.32 CD8_TEM L2
ENSG00000112306 RPS12 646668 sc-eQTL 9.62e-02 0.087 0.052 0.32 CD8_TEM L2
ENSG00000118515 SGK1 -856875 sc-eQTL 9.63e-01 -0.00398 0.0859 0.32 CD8_TEM L2
ENSG00000146409 SLC18B1 647898 sc-eQTL 5.61e-02 0.189 0.0982 0.32 CD8_TEM L2
ENSG00000028839 TBPL1 -490933 sc-eQTL 2.78e-01 -0.1 0.092 0.314 MAIT L2
ENSG00000079950 STX7 948039 sc-eQTL 6.28e-01 -0.0425 0.0876 0.314 MAIT L2
ENSG00000112303 VNN2 697778 sc-eQTL 6.45e-01 0.0412 0.0891 0.314 MAIT L2
ENSG00000112306 RPS12 646668 sc-eQTL 2.24e-02 -0.0997 0.0433 0.314 MAIT L2
ENSG00000118515 SGK1 -856875 sc-eQTL 5.05e-01 0.0412 0.0617 0.314 MAIT L2
ENSG00000146409 SLC18B1 647898 sc-eQTL 4.81e-01 -0.0649 0.0919 0.314 MAIT L2
ENSG00000028839 TBPL1 -490933 sc-eQTL 5.39e-01 -0.0611 0.0992 0.311 NK_CD56bright L2
ENSG00000079950 STX7 948039 sc-eQTL 6.41e-01 -0.043 0.0921 0.311 NK_CD56bright L2
ENSG00000112303 VNN2 697778 sc-eQTL 6.70e-01 -0.0399 0.0935 0.311 NK_CD56bright L2
ENSG00000112306 RPS12 646668 sc-eQTL 6.17e-01 -0.0261 0.0521 0.311 NK_CD56bright L2
ENSG00000118515 SGK1 -856875 sc-eQTL 4.31e-01 -0.0613 0.0778 0.311 NK_CD56bright L2
ENSG00000028839 TBPL1 -490933 sc-eQTL 7.00e-01 0.0307 0.0794 0.315 NK_CD56dim L2
ENSG00000079950 STX7 948039 sc-eQTL 7.10e-01 -0.0271 0.0727 0.315 NK_CD56dim L2
ENSG00000112303 VNN2 697778 sc-eQTL 7.10e-02 -0.164 0.0903 0.315 NK_CD56dim L2
ENSG00000112306 RPS12 646668 sc-eQTL 1.74e-01 -0.049 0.0359 0.315 NK_CD56dim L2
ENSG00000118515 SGK1 -856875 sc-eQTL 8.29e-01 0.0173 0.08 0.315 NK_CD56dim L2
ENSG00000028839 TBPL1 -490933 sc-eQTL 8.71e-01 0.0161 0.0992 0.313 NK_HLA L2
ENSG00000079950 STX7 948039 sc-eQTL 7.01e-01 0.0347 0.0902 0.313 NK_HLA L2
ENSG00000112303 VNN2 697778 sc-eQTL 7.94e-01 -0.0239 0.0914 0.313 NK_HLA L2
ENSG00000112306 RPS12 646668 sc-eQTL 2.16e-01 -0.0527 0.0424 0.313 NK_HLA L2
ENSG00000118515 SGK1 -856875 sc-eQTL 2.73e-01 0.0921 0.0839 0.313 NK_HLA L2
ENSG00000028839 TBPL1 -490933 sc-eQTL 8.38e-01 0.0168 0.082 0.315 NK_cytokine L2
ENSG00000079950 STX7 948039 sc-eQTL 1.16e-01 0.125 0.0789 0.315 NK_cytokine L2
ENSG00000112303 VNN2 697778 sc-eQTL 7.29e-01 -0.0309 0.0892 0.315 NK_cytokine L2
ENSG00000112306 RPS12 646668 sc-eQTL 6.56e-01 -0.0216 0.0484 0.315 NK_cytokine L2
ENSG00000118515 SGK1 -856875 sc-eQTL 4.29e-01 -0.0638 0.0805 0.315 NK_cytokine L2
ENSG00000028839 TBPL1 -490933 sc-eQTL 9.34e-01 -0.00915 0.11 0.315 PB L2
ENSG00000079950 STX7 948039 sc-eQTL 3.70e-01 -0.0705 0.0783 0.315 PB L2
ENSG00000112303 VNN2 697778 sc-eQTL 5.09e-01 -0.0635 0.0959 0.315 PB L2
ENSG00000112306 RPS12 646668 sc-eQTL 2.32e-01 -0.0651 0.0542 0.315 PB L2
ENSG00000118515 SGK1 -856875 sc-eQTL 8.13e-01 0.0209 0.0881 0.315 PB L2
ENSG00000146409 SLC18B1 647898 sc-eQTL 8.88e-01 -0.0145 0.102 0.315 PB L2
ENSG00000028839 TBPL1 -490933 sc-eQTL 9.62e-01 0.00445 0.0937 0.317 Pro_T L2
ENSG00000079950 STX7 948039 sc-eQTL 6.99e-02 0.151 0.083 0.317 Pro_T L2
ENSG00000112303 VNN2 697778 sc-eQTL 8.76e-01 -0.014 0.0897 0.317 Pro_T L2
ENSG00000112306 RPS12 646668 sc-eQTL 5.93e-01 -0.0182 0.0339 0.317 Pro_T L2
ENSG00000118515 SGK1 -856875 sc-eQTL 5.28e-01 0.043 0.068 0.317 Pro_T L2
ENSG00000146409 SLC18B1 647898 sc-eQTL 9.36e-01 0.00709 0.0879 0.317 Pro_T L2
ENSG00000028839 TBPL1 -490933 sc-eQTL 5.95e-01 -0.0502 0.0944 0.316 Treg L2
ENSG00000079950 STX7 948039 sc-eQTL 3.90e-01 0.0765 0.0889 0.316 Treg L2
ENSG00000112303 VNN2 697778 sc-eQTL 5.97e-01 0.0396 0.0749 0.316 Treg L2
ENSG00000112306 RPS12 646668 sc-eQTL 6.85e-01 0.0135 0.0331 0.316 Treg L2
ENSG00000118515 SGK1 -856875 sc-eQTL 8.46e-01 0.0136 0.0698 0.316 Treg L2
ENSG00000146409 SLC18B1 647898 sc-eQTL 9.29e-01 -0.00833 0.0936 0.316 Treg L2
ENSG00000028839 TBPL1 -490933 sc-eQTL 9.66e-01 -0.00419 0.0994 0.32 cDC L2
ENSG00000079950 STX7 948039 sc-eQTL 7.36e-01 0.0263 0.078 0.32 cDC L2
ENSG00000093134 VNN3 726472 sc-eQTL 8.51e-01 -0.0146 0.0775 0.32 cDC L2
ENSG00000112299 VNN1 747182 sc-eQTL 4.71e-01 0.0657 0.091 0.32 cDC L2
ENSG00000112303 VNN2 697778 sc-eQTL 9.61e-01 0.00431 0.0888 0.32 cDC L2
ENSG00000112306 RPS12 646668 sc-eQTL 7.52e-01 -0.0138 0.0438 0.32 cDC L2
ENSG00000118515 SGK1 -856875 sc-eQTL 3.35e-01 0.0712 0.0737 0.32 cDC L2
ENSG00000146409 SLC18B1 647898 sc-eQTL 5.01e-01 0.0585 0.0867 0.32 cDC L2
ENSG00000286438 AL591115.1 358109 sc-eQTL 6.76e-01 -0.0291 0.0694 0.32 cDC L2
ENSG00000286887 AL355881.1 -835064 sc-eQTL 2.66e-01 0.0949 0.0851 0.32 cDC L2
ENSG00000028839 TBPL1 -490933 sc-eQTL 7.54e-01 0.0241 0.0769 0.316 cMono_IL1B L2
ENSG00000079950 STX7 948039 sc-eQTL 6.43e-01 0.0271 0.0584 0.316 cMono_IL1B L2
ENSG00000093134 VNN3 726472 sc-eQTL 2.10e-01 -0.103 0.0822 0.316 cMono_IL1B L2
ENSG00000112299 VNN1 747182 sc-eQTL 2.20e-01 0.102 0.083 0.316 cMono_IL1B L2
ENSG00000112303 VNN2 697778 sc-eQTL 9.87e-01 -0.00106 0.0666 0.316 cMono_IL1B L2
ENSG00000112306 RPS12 646668 sc-eQTL 3.87e-01 -0.032 0.0369 0.316 cMono_IL1B L2
ENSG00000118515 SGK1 -856875 sc-eQTL 6.88e-01 0.0222 0.0551 0.316 cMono_IL1B L2
ENSG00000146409 SLC18B1 647898 sc-eQTL 5.43e-01 -0.0434 0.0713 0.316 cMono_IL1B L2
ENSG00000286887 AL355881.1 -835064 sc-eQTL 8.92e-01 0.0101 0.0743 0.316 cMono_IL1B L2
ENSG00000028839 TBPL1 -490933 sc-eQTL 6.22e-01 -0.0431 0.0872 0.316 cMono_S100A L2
ENSG00000079950 STX7 948039 sc-eQTL 3.70e-02 0.131 0.0624 0.316 cMono_S100A L2
ENSG00000093134 VNN3 726472 sc-eQTL 2.85e-02 -0.172 0.0778 0.316 cMono_S100A L2
ENSG00000112299 VNN1 747182 sc-eQTL 1.04e-01 0.139 0.0849 0.316 cMono_S100A L2
ENSG00000112303 VNN2 697778 sc-eQTL 5.61e-01 -0.0326 0.0559 0.316 cMono_S100A L2
ENSG00000112306 RPS12 646668 sc-eQTL 6.57e-01 -0.0179 0.0403 0.316 cMono_S100A L2
ENSG00000118515 SGK1 -856875 sc-eQTL 1.48e-01 0.0666 0.0459 0.316 cMono_S100A L2
ENSG00000146409 SLC18B1 647898 sc-eQTL 2.54e-01 -0.085 0.0744 0.316 cMono_S100A L2
ENSG00000286887 AL355881.1 -835064 sc-eQTL 5.43e-01 -0.0444 0.0729 0.316 cMono_S100A L2
ENSG00000028839 TBPL1 -490933 sc-eQTL 5.90e-01 0.064 0.119 0.312 gdT L2
ENSG00000079950 STX7 948039 sc-eQTL 1.36e-02 0.25 0.0999 0.312 gdT L2
ENSG00000112303 VNN2 697778 sc-eQTL 2.15e-01 -0.14 0.112 0.312 gdT L2
ENSG00000112306 RPS12 646668 sc-eQTL 7.93e-01 -0.0113 0.043 0.312 gdT L2
ENSG00000118515 SGK1 -856875 sc-eQTL 4.64e-03 0.227 0.0789 0.312 gdT L2
ENSG00000146409 SLC18B1 647898 sc-eQTL 5.29e-01 0.07 0.111 0.312 gdT L2
ENSG00000028839 TBPL1 -490933 sc-eQTL 7.74e-01 0.0258 0.0897 0.322 intMono L2
ENSG00000079950 STX7 948039 sc-eQTL 6.79e-01 -0.0355 0.0857 0.322 intMono L2
ENSG00000093134 VNN3 726472 sc-eQTL 3.36e-02 -0.183 0.0856 0.322 intMono L2
ENSG00000112299 VNN1 747182 sc-eQTL 6.42e-02 0.158 0.0848 0.322 intMono L2
ENSG00000112303 VNN2 697778 sc-eQTL 6.58e-01 0.0386 0.0869 0.322 intMono L2
ENSG00000112306 RPS12 646668 sc-eQTL 2.44e-01 -0.0441 0.0377 0.322 intMono L2
ENSG00000118515 SGK1 -856875 sc-eQTL 9.33e-01 -0.00533 0.0636 0.322 intMono L2
ENSG00000146409 SLC18B1 647898 sc-eQTL 2.49e-01 0.106 0.0918 0.322 intMono L2
ENSG00000286887 AL355881.1 -835064 sc-eQTL 7.81e-01 0.0245 0.0881 0.322 intMono L2
ENSG00000028839 TBPL1 -490933 sc-eQTL 7.44e-01 0.0312 0.0953 0.317 ncMono L2
ENSG00000079950 STX7 948039 sc-eQTL 4.63e-01 -0.0473 0.0643 0.317 ncMono L2
ENSG00000093134 VNN3 726472 sc-eQTL 9.12e-01 0.01 0.0909 0.317 ncMono L2
ENSG00000112299 VNN1 747182 sc-eQTL 3.68e-01 0.0813 0.0901 0.317 ncMono L2
ENSG00000112303 VNN2 697778 sc-eQTL 3.80e-01 0.0762 0.0866 0.317 ncMono L2
ENSG00000112306 RPS12 646668 sc-eQTL 7.06e-01 -0.0164 0.0435 0.317 ncMono L2
ENSG00000118515 SGK1 -856875 sc-eQTL 8.98e-03 0.16 0.0605 0.317 ncMono L2
ENSG00000146409 SLC18B1 647898 sc-eQTL 5.99e-01 -0.0405 0.0768 0.317 ncMono L2
ENSG00000286887 AL355881.1 -835064 sc-eQTL 3.86e-02 0.167 0.0804 0.317 ncMono L2
ENSG00000028839 TBPL1 -490933 sc-eQTL 3.82e-01 -0.0967 0.11 0.319 pDC L2
ENSG00000079950 STX7 948039 sc-eQTL 6.72e-01 -0.0313 0.0736 0.319 pDC L2
ENSG00000093134 VNN3 726472 sc-eQTL 5.56e-01 -0.0436 0.074 0.319 pDC L2
ENSG00000112299 VNN1 747182 sc-eQTL 1.71e-01 0.103 0.075 0.319 pDC L2
ENSG00000112303 VNN2 697778 sc-eQTL 2.46e-01 -0.104 0.0894 0.319 pDC L2
ENSG00000112306 RPS12 646668 sc-eQTL 8.94e-01 -0.00827 0.0618 0.319 pDC L2
ENSG00000118515 SGK1 -856875 sc-eQTL 5.39e-01 0.0386 0.0628 0.319 pDC L2
ENSG00000146409 SLC18B1 647898 sc-eQTL 1.43e-02 -0.222 0.0898 0.319 pDC L2
ENSG00000286438 AL591115.1 358109 sc-eQTL 6.64e-01 0.0381 0.0875 0.319 pDC L2
ENSG00000286887 AL355881.1 -835064 sc-eQTL 4.35e-01 0.0607 0.0775 0.319 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -490933 sc-eQTL 1.06e-01 0.153 0.0941 0.316 B_Memory LOneK1K
ENSG00000079950 STX7 948039 sc-eQTL 1.16e-01 0.0818 0.0518 0.316 B_Memory LOneK1K
ENSG00000112303 VNN2 697778 sc-eQTL 2.79e-01 0.0893 0.0822 0.316 B_Memory LOneK1K
ENSG00000112306 RPS12 646668 sc-eQTL 9.27e-01 -0.00431 0.047 0.316 B_Memory LOneK1K
ENSG00000118515 SGK1 -856875 sc-eQTL 2.22e-01 0.0897 0.0732 0.316 B_Memory LOneK1K
ENSG00000146409 SLC18B1 647898 sc-eQTL 9.78e-02 0.142 0.0856 0.316 B_Memory LOneK1K
ENSG00000028839 TBPL1 -490933 sc-eQTL 8.44e-01 0.0171 0.0869 0.316 B_Naive LOneK1K
ENSG00000079950 STX7 948039 sc-eQTL 1.08e-01 0.0628 0.0389 0.316 B_Naive LOneK1K
ENSG00000112303 VNN2 697778 sc-eQTL 2.83e-01 -0.0817 0.0759 0.316 B_Naive LOneK1K
ENSG00000112306 RPS12 646668 sc-eQTL 8.91e-01 0.00633 0.046 0.316 B_Naive LOneK1K
ENSG00000118515 SGK1 -856875 sc-eQTL 5.21e-01 0.0458 0.0712 0.316 B_Naive LOneK1K
ENSG00000146409 SLC18B1 647898 sc-eQTL 6.71e-01 0.0369 0.0868 0.316 B_Naive LOneK1K
ENSG00000028839 TBPL1 -490933 sc-eQTL 8.19e-01 -0.016 0.07 0.316 CD14_Mono LOneK1K
ENSG00000079950 STX7 948039 sc-eQTL 1.88e-01 0.0641 0.0485 0.316 CD14_Mono LOneK1K
ENSG00000093134 VNN3 726472 sc-eQTL 5.75e-02 -0.15 0.0787 0.316 CD14_Mono LOneK1K
ENSG00000112299 VNN1 747182 sc-eQTL 7.79e-02 0.146 0.0822 0.316 CD14_Mono LOneK1K
ENSG00000112303 VNN2 697778 sc-eQTL 8.31e-01 -0.0117 0.0547 0.316 CD14_Mono LOneK1K
ENSG00000112306 RPS12 646668 sc-eQTL 3.83e-01 -0.0328 0.0375 0.316 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -856875 sc-eQTL 5.59e-01 0.0299 0.0511 0.316 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 647898 sc-eQTL 2.67e-01 -0.0741 0.0666 0.316 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -835064 sc-eQTL 7.58e-01 -0.0216 0.07 0.316 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -490933 sc-eQTL 9.18e-01 0.00949 0.0918 0.317 CD16_Mono LOneK1K
ENSG00000079950 STX7 948039 sc-eQTL 1.44e-01 -0.0884 0.0603 0.317 CD16_Mono LOneK1K
ENSG00000093134 VNN3 726472 sc-eQTL 1.42e-01 -0.131 0.0887 0.317 CD16_Mono LOneK1K
ENSG00000112299 VNN1 747182 sc-eQTL 2.26e-01 0.107 0.088 0.317 CD16_Mono LOneK1K
ENSG00000112303 VNN2 697778 sc-eQTL 2.24e-01 0.101 0.083 0.317 CD16_Mono LOneK1K
ENSG00000112306 RPS12 646668 sc-eQTL 6.56e-01 -0.0157 0.0353 0.317 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -856875 sc-eQTL 1.82e-01 0.0713 0.0532 0.317 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 647898 sc-eQTL 9.68e-01 0.00344 0.0858 0.317 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -835064 sc-eQTL 2.63e-01 0.0868 0.0773 0.317 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -490933 sc-eQTL 4.68e-01 0.0533 0.0734 0.315 NK_CD56dim LOneK1K
ENSG00000079950 STX7 948039 sc-eQTL 7.76e-01 0.0197 0.069 0.315 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 697778 sc-eQTL 1.71e-01 -0.12 0.087 0.315 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 646668 sc-eQTL 1.09e-01 -0.0571 0.0354 0.315 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -856875 sc-eQTL 7.80e-01 -0.0206 0.0737 0.315 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079950 STX7 948039 eQTL 0.00248 0.051 0.0168 0.0 0.0 0.308
ENSG00000112299 VNN1 747182 pQTL 0.000283 0.135 0.037 0.0 0.0 0.324
ENSG00000112303 VNN2 697778 eQTL 0.0138 0.0339 0.0137 0.0 0.0 0.308
ENSG00000146409 SLC18B1 647898 eQTL 0.00642 0.0645 0.0236 0.0 0.0 0.308

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina