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Genes within 1Mb (chr6:133447666:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -504504 sc-eQTL 7.80e-01 0.0235 0.0842 0.513 B L1
ENSG00000079950 STX7 934468 sc-eQTL 2.17e-01 0.0414 0.0334 0.513 B L1
ENSG00000112303 VNN2 684207 sc-eQTL 7.14e-01 -0.0232 0.0631 0.513 B L1
ENSG00000112306 RPS12 633097 sc-eQTL 2.82e-02 0.0833 0.0377 0.513 B L1
ENSG00000118515 SGK1 -870446 sc-eQTL 2.89e-01 -0.0624 0.0587 0.513 B L1
ENSG00000146409 SLC18B1 634327 sc-eQTL 1.35e-01 0.12 0.0799 0.513 B L1
ENSG00000028839 TBPL1 -504504 sc-eQTL 1.68e-01 0.0853 0.0617 0.513 CD4T L1
ENSG00000079950 STX7 934468 sc-eQTL 4.28e-01 0.051 0.0643 0.513 CD4T L1
ENSG00000112303 VNN2 684207 sc-eQTL 9.28e-01 -0.00506 0.0558 0.513 CD4T L1
ENSG00000112306 RPS12 633097 sc-eQTL 4.07e-01 0.0314 0.0379 0.513 CD4T L1
ENSG00000118515 SGK1 -870446 sc-eQTL 3.41e-02 -0.108 0.0504 0.513 CD4T L1
ENSG00000146409 SLC18B1 634327 sc-eQTL 1.62e-01 0.107 0.0763 0.513 CD4T L1
ENSG00000028839 TBPL1 -504504 sc-eQTL 4.65e-01 0.0453 0.0619 0.513 CD8T L1
ENSG00000079950 STX7 934468 sc-eQTL 9.71e-02 0.107 0.0642 0.513 CD8T L1
ENSG00000112303 VNN2 684207 sc-eQTL 7.43e-01 -0.0247 0.0755 0.513 CD8T L1
ENSG00000112306 RPS12 633097 sc-eQTL 9.70e-02 0.0427 0.0256 0.513 CD8T L1
ENSG00000118515 SGK1 -870446 sc-eQTL 3.59e-02 -0.0831 0.0393 0.513 CD8T L1
ENSG00000146409 SLC18B1 634327 sc-eQTL 6.64e-02 0.143 0.0774 0.513 CD8T L1
ENSG00000028839 TBPL1 -504504 sc-eQTL 8.35e-01 0.0192 0.0918 0.509 DC L1
ENSG00000079950 STX7 934468 sc-eQTL 9.04e-01 -0.0069 0.0571 0.509 DC L1
ENSG00000093134 VNN3 712901 sc-eQTL 7.56e-01 -0.022 0.0707 0.509 DC L1
ENSG00000112299 VNN1 733611 sc-eQTL 1.66e-01 0.106 0.076 0.509 DC L1
ENSG00000112303 VNN2 684207 sc-eQTL 8.71e-01 0.0132 0.0817 0.509 DC L1
ENSG00000112306 RPS12 633097 sc-eQTL 9.55e-01 -0.00258 0.0458 0.509 DC L1
ENSG00000118515 SGK1 -870446 sc-eQTL 8.74e-01 0.00842 0.0532 0.509 DC L1
ENSG00000146409 SLC18B1 634327 sc-eQTL 5.50e-02 -0.139 0.0718 0.509 DC L1
ENSG00000286438 AL591115.1 344538 sc-eQTL 3.16e-01 0.0662 0.0658 0.509 DC L1
ENSG00000286887 AL355881.1 -848635 sc-eQTL 6.52e-01 0.0371 0.0822 0.509 DC L1
ENSG00000028839 TBPL1 -504504 sc-eQTL 6.52e-01 0.0297 0.0659 0.513 Mono L1
ENSG00000079950 STX7 934468 sc-eQTL 5.80e-01 0.0244 0.0441 0.513 Mono L1
ENSG00000093134 VNN3 712901 sc-eQTL 2.38e-01 0.0893 0.0754 0.513 Mono L1
ENSG00000112299 VNN1 733611 sc-eQTL 9.85e-01 -0.00151 0.0814 0.513 Mono L1
ENSG00000112303 VNN2 684207 sc-eQTL 6.62e-01 -0.0252 0.0574 0.513 Mono L1
ENSG00000112306 RPS12 633097 sc-eQTL 2.75e-01 -0.0376 0.0343 0.513 Mono L1
ENSG00000118515 SGK1 -870446 sc-eQTL 8.67e-01 -0.00818 0.0486 0.513 Mono L1
ENSG00000146409 SLC18B1 634327 sc-eQTL 8.43e-01 -0.0135 0.0681 0.513 Mono L1
ENSG00000286887 AL355881.1 -848635 sc-eQTL 4.52e-01 -0.0504 0.0669 0.513 Mono L1
ENSG00000028839 TBPL1 -504504 sc-eQTL 9.31e-01 0.00629 0.0722 0.513 NK L1
ENSG00000079950 STX7 934468 sc-eQTL 6.86e-02 0.121 0.0662 0.513 NK L1
ENSG00000112303 VNN2 684207 sc-eQTL 2.19e-01 -0.102 0.0828 0.513 NK L1
ENSG00000112306 RPS12 633097 sc-eQTL 8.51e-01 -0.00648 0.0344 0.513 NK L1
ENSG00000118515 SGK1 -870446 sc-eQTL 3.46e-01 -0.0599 0.0634 0.513 NK L1
ENSG00000028839 TBPL1 -504504 sc-eQTL 4.98e-01 -0.0565 0.0832 0.513 Other_T L1
ENSG00000079950 STX7 934468 sc-eQTL 1.06e-01 0.106 0.0652 0.513 Other_T L1
ENSG00000112303 VNN2 684207 sc-eQTL 3.18e-01 -0.0793 0.0791 0.513 Other_T L1
ENSG00000112306 RPS12 633097 sc-eQTL 5.07e-01 -0.0209 0.0314 0.513 Other_T L1
ENSG00000118515 SGK1 -870446 sc-eQTL 4.37e-01 -0.0449 0.0578 0.513 Other_T L1
ENSG00000146409 SLC18B1 634327 sc-eQTL 6.97e-01 0.0336 0.0861 0.513 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -504504 sc-eQTL 2.60e-01 0.111 0.0981 0.503 B_Activated L2
ENSG00000079950 STX7 934468 sc-eQTL 7.44e-01 0.0275 0.0843 0.503 B_Activated L2
ENSG00000112303 VNN2 684207 sc-eQTL 9.50e-02 0.149 0.089 0.503 B_Activated L2
ENSG00000112306 RPS12 633097 sc-eQTL 6.57e-01 0.0214 0.0481 0.503 B_Activated L2
ENSG00000118515 SGK1 -870446 sc-eQTL 9.84e-01 -0.00177 0.0857 0.503 B_Activated L2
ENSG00000146409 SLC18B1 634327 sc-eQTL 7.69e-01 0.0248 0.0842 0.503 B_Activated L2
ENSG00000028839 TBPL1 -504504 sc-eQTL 5.97e-01 0.049 0.0925 0.511 B_Intermediate L2
ENSG00000079950 STX7 934468 sc-eQTL 2.84e-02 0.116 0.0526 0.511 B_Intermediate L2
ENSG00000112303 VNN2 684207 sc-eQTL 7.10e-01 0.0298 0.0801 0.511 B_Intermediate L2
ENSG00000112306 RPS12 633097 sc-eQTL 1.56e-01 0.0696 0.0488 0.511 B_Intermediate L2
ENSG00000118515 SGK1 -870446 sc-eQTL 4.65e-02 -0.168 0.084 0.511 B_Intermediate L2
ENSG00000146409 SLC18B1 634327 sc-eQTL 6.16e-01 0.0443 0.0883 0.511 B_Intermediate L2
ENSG00000028839 TBPL1 -504504 sc-eQTL 1.64e-01 -0.126 0.0898 0.513 B_Memory L2
ENSG00000079950 STX7 934468 sc-eQTL 1.26e-02 0.162 0.0644 0.513 B_Memory L2
ENSG00000112303 VNN2 684207 sc-eQTL 3.78e-01 0.0754 0.0853 0.513 B_Memory L2
ENSG00000112306 RPS12 633097 sc-eQTL 3.43e-02 0.0868 0.0407 0.513 B_Memory L2
ENSG00000118515 SGK1 -870446 sc-eQTL 1.78e-01 0.102 0.0752 0.513 B_Memory L2
ENSG00000146409 SLC18B1 634327 sc-eQTL 9.44e-01 -0.00604 0.0859 0.513 B_Memory L2
ENSG00000028839 TBPL1 -504504 sc-eQTL 2.33e-01 0.101 0.084 0.513 B_Naive1 L2
ENSG00000079950 STX7 934468 sc-eQTL 7.19e-01 0.0146 0.0405 0.513 B_Naive1 L2
ENSG00000112303 VNN2 684207 sc-eQTL 1.70e-01 -0.108 0.0783 0.513 B_Naive1 L2
ENSG00000112306 RPS12 633097 sc-eQTL 1.02e-01 0.073 0.0445 0.513 B_Naive1 L2
ENSG00000118515 SGK1 -870446 sc-eQTL 9.32e-01 -0.00595 0.0701 0.513 B_Naive1 L2
ENSG00000146409 SLC18B1 634327 sc-eQTL 8.47e-01 0.0167 0.0865 0.513 B_Naive1 L2
ENSG00000028839 TBPL1 -504504 sc-eQTL 9.58e-01 0.00479 0.09 0.513 B_Naive2 L2
ENSG00000079950 STX7 934468 sc-eQTL 2.77e-01 0.052 0.0477 0.513 B_Naive2 L2
ENSG00000112303 VNN2 684207 sc-eQTL 3.74e-01 0.0781 0.0876 0.513 B_Naive2 L2
ENSG00000112306 RPS12 633097 sc-eQTL 6.74e-02 0.0848 0.0461 0.513 B_Naive2 L2
ENSG00000118515 SGK1 -870446 sc-eQTL 1.89e-01 -0.108 0.0818 0.513 B_Naive2 L2
ENSG00000146409 SLC18B1 634327 sc-eQTL 4.12e-02 0.18 0.0878 0.513 B_Naive2 L2
ENSG00000028839 TBPL1 -504504 sc-eQTL 2.87e-01 0.0957 0.0896 0.518 CD4_CTL L2
ENSG00000079950 STX7 934468 sc-eQTL 8.74e-01 -0.0142 0.0892 0.518 CD4_CTL L2
ENSG00000112303 VNN2 684207 sc-eQTL 9.55e-01 0.00509 0.09 0.518 CD4_CTL L2
ENSG00000112306 RPS12 633097 sc-eQTL 5.44e-01 0.0253 0.0416 0.518 CD4_CTL L2
ENSG00000118515 SGK1 -870446 sc-eQTL 2.31e-01 -0.0864 0.0718 0.518 CD4_CTL L2
ENSG00000146409 SLC18B1 634327 sc-eQTL 2.70e-01 0.0924 0.0836 0.518 CD4_CTL L2
ENSG00000028839 TBPL1 -504504 sc-eQTL 9.96e-01 -0.000368 0.0709 0.513 CD4_Naive L2
ENSG00000079950 STX7 934468 sc-eQTL 6.14e-01 0.0351 0.0695 0.513 CD4_Naive L2
ENSG00000112303 VNN2 684207 sc-eQTL 8.35e-01 -0.0134 0.0644 0.513 CD4_Naive L2
ENSG00000112306 RPS12 633097 sc-eQTL 6.16e-01 0.021 0.0418 0.513 CD4_Naive L2
ENSG00000118515 SGK1 -870446 sc-eQTL 6.48e-02 -0.0942 0.0508 0.513 CD4_Naive L2
ENSG00000146409 SLC18B1 634327 sc-eQTL 8.63e-02 0.138 0.0799 0.513 CD4_Naive L2
ENSG00000028839 TBPL1 -504504 sc-eQTL 7.43e-02 0.138 0.0767 0.513 CD4_TCM L2
ENSG00000079950 STX7 934468 sc-eQTL 4.25e-01 0.062 0.0777 0.513 CD4_TCM L2
ENSG00000112303 VNN2 684207 sc-eQTL 2.64e-01 -0.0855 0.0764 0.513 CD4_TCM L2
ENSG00000112306 RPS12 633097 sc-eQTL 5.17e-01 0.0258 0.0397 0.513 CD4_TCM L2
ENSG00000118515 SGK1 -870446 sc-eQTL 7.13e-01 -0.0205 0.0556 0.513 CD4_TCM L2
ENSG00000146409 SLC18B1 634327 sc-eQTL 4.16e-01 0.0749 0.0919 0.513 CD4_TCM L2
ENSG00000028839 TBPL1 -504504 sc-eQTL 1.13e-01 0.141 0.0886 0.513 CD4_TEM L2
ENSG00000079950 STX7 934468 sc-eQTL 7.70e-01 0.0262 0.0892 0.513 CD4_TEM L2
ENSG00000112303 VNN2 684207 sc-eQTL 8.45e-02 0.147 0.085 0.513 CD4_TEM L2
ENSG00000112306 RPS12 633097 sc-eQTL 6.02e-01 -0.0183 0.0351 0.513 CD4_TEM L2
ENSG00000118515 SGK1 -870446 sc-eQTL 1.54e-01 -0.0859 0.0601 0.513 CD4_TEM L2
ENSG00000146409 SLC18B1 634327 sc-eQTL 1.64e-01 0.121 0.0869 0.513 CD4_TEM L2
ENSG00000028839 TBPL1 -504504 sc-eQTL 3.21e-02 0.168 0.078 0.513 CD8_CTL L2
ENSG00000079950 STX7 934468 sc-eQTL 8.62e-02 0.126 0.0732 0.513 CD8_CTL L2
ENSG00000112303 VNN2 684207 sc-eQTL 9.90e-01 -0.00105 0.0837 0.513 CD8_CTL L2
ENSG00000112306 RPS12 633097 sc-eQTL 7.96e-01 0.0116 0.0448 0.513 CD8_CTL L2
ENSG00000118515 SGK1 -870446 sc-eQTL 3.59e-01 -0.0694 0.0755 0.513 CD8_CTL L2
ENSG00000146409 SLC18B1 634327 sc-eQTL 9.25e-01 -0.00817 0.0868 0.513 CD8_CTL L2
ENSG00000028839 TBPL1 -504504 sc-eQTL 7.81e-01 -0.023 0.0827 0.513 CD8_Naive L2
ENSG00000079950 STX7 934468 sc-eQTL 3.76e-02 0.183 0.0873 0.513 CD8_Naive L2
ENSG00000112303 VNN2 684207 sc-eQTL 2.65e-01 -0.0848 0.0758 0.513 CD8_Naive L2
ENSG00000112306 RPS12 633097 sc-eQTL 3.29e-01 0.0426 0.0435 0.513 CD8_Naive L2
ENSG00000118515 SGK1 -870446 sc-eQTL 3.92e-03 -0.156 0.0536 0.513 CD8_Naive L2
ENSG00000146409 SLC18B1 634327 sc-eQTL 1.04e-02 0.223 0.086 0.513 CD8_Naive L2
ENSG00000028839 TBPL1 -504504 sc-eQTL 2.00e-01 -0.121 0.0942 0.523 CD8_TCM L2
ENSG00000079950 STX7 934468 sc-eQTL 1.99e-01 0.112 0.0872 0.523 CD8_TCM L2
ENSG00000112303 VNN2 684207 sc-eQTL 9.39e-01 0.00668 0.0869 0.523 CD8_TCM L2
ENSG00000112306 RPS12 633097 sc-eQTL 7.65e-01 -0.0127 0.0423 0.523 CD8_TCM L2
ENSG00000118515 SGK1 -870446 sc-eQTL 4.67e-01 -0.0511 0.07 0.523 CD8_TCM L2
ENSG00000146409 SLC18B1 634327 sc-eQTL 1.00e+00 -2.74e-07 0.0928 0.523 CD8_TCM L2
ENSG00000028839 TBPL1 -504504 sc-eQTL 8.27e-02 -0.146 0.0837 0.505 CD8_TEM L2
ENSG00000079950 STX7 934468 sc-eQTL 5.55e-02 -0.176 0.0912 0.505 CD8_TEM L2
ENSG00000112303 VNN2 684207 sc-eQTL 9.20e-01 -0.00924 0.0916 0.505 CD8_TEM L2
ENSG00000112306 RPS12 633097 sc-eQTL 1.86e-01 0.0651 0.049 0.505 CD8_TEM L2
ENSG00000118515 SGK1 -870446 sc-eQTL 5.21e-01 -0.0519 0.0806 0.505 CD8_TEM L2
ENSG00000146409 SLC18B1 634327 sc-eQTL 1.58e-01 0.131 0.0927 0.505 CD8_TEM L2
ENSG00000028839 TBPL1 -504504 sc-eQTL 3.15e-01 -0.0899 0.0894 0.513 MAIT L2
ENSG00000079950 STX7 934468 sc-eQTL 1.86e-01 0.112 0.0848 0.513 MAIT L2
ENSG00000112303 VNN2 684207 sc-eQTL 6.69e-01 0.037 0.0865 0.513 MAIT L2
ENSG00000112306 RPS12 633097 sc-eQTL 1.11e-01 -0.0678 0.0423 0.513 MAIT L2
ENSG00000118515 SGK1 -870446 sc-eQTL 8.29e-01 -0.013 0.0599 0.513 MAIT L2
ENSG00000146409 SLC18B1 634327 sc-eQTL 7.62e-01 -0.0271 0.0892 0.513 MAIT L2
ENSG00000028839 TBPL1 -504504 sc-eQTL 4.31e-01 0.075 0.095 0.504 NK_CD56bright L2
ENSG00000079950 STX7 934468 sc-eQTL 3.83e-01 -0.077 0.0881 0.504 NK_CD56bright L2
ENSG00000112303 VNN2 684207 sc-eQTL 3.78e-01 -0.0791 0.0895 0.504 NK_CD56bright L2
ENSG00000112306 RPS12 633097 sc-eQTL 9.83e-01 0.00107 0.0499 0.504 NK_CD56bright L2
ENSG00000118515 SGK1 -870446 sc-eQTL 6.34e-01 0.0355 0.0746 0.504 NK_CD56bright L2
ENSG00000028839 TBPL1 -504504 sc-eQTL 9.71e-01 0.00281 0.0777 0.515 NK_CD56dim L2
ENSG00000079950 STX7 934468 sc-eQTL 1.49e-01 0.102 0.0707 0.515 NK_CD56dim L2
ENSG00000112303 VNN2 684207 sc-eQTL 2.47e-01 -0.103 0.0886 0.515 NK_CD56dim L2
ENSG00000112306 RPS12 633097 sc-eQTL 7.97e-01 0.00909 0.0353 0.515 NK_CD56dim L2
ENSG00000118515 SGK1 -870446 sc-eQTL 2.44e-01 -0.091 0.0779 0.515 NK_CD56dim L2
ENSG00000028839 TBPL1 -504504 sc-eQTL 2.79e-01 0.104 0.0955 0.509 NK_HLA L2
ENSG00000079950 STX7 934468 sc-eQTL 2.80e-01 0.0941 0.0869 0.509 NK_HLA L2
ENSG00000112303 VNN2 684207 sc-eQTL 2.38e-01 -0.104 0.0879 0.509 NK_HLA L2
ENSG00000112306 RPS12 633097 sc-eQTL 8.60e-01 0.00726 0.0411 0.509 NK_HLA L2
ENSG00000118515 SGK1 -870446 sc-eQTL 6.52e-01 0.0367 0.0812 0.509 NK_HLA L2
ENSG00000028839 TBPL1 -504504 sc-eQTL 5.99e-01 -0.042 0.0797 0.515 NK_cytokine L2
ENSG00000079950 STX7 934468 sc-eQTL 1.34e-01 0.116 0.0768 0.515 NK_cytokine L2
ENSG00000112303 VNN2 684207 sc-eQTL 4.53e-01 -0.0651 0.0867 0.515 NK_cytokine L2
ENSG00000112306 RPS12 633097 sc-eQTL 7.47e-01 0.0152 0.0471 0.515 NK_cytokine L2
ENSG00000118515 SGK1 -870446 sc-eQTL 7.54e-02 -0.139 0.0778 0.515 NK_cytokine L2
ENSG00000028839 TBPL1 -504504 sc-eQTL 9.24e-01 0.0103 0.107 0.507 PB L2
ENSG00000079950 STX7 934468 sc-eQTL 4.99e-01 -0.0517 0.0763 0.507 PB L2
ENSG00000112303 VNN2 684207 sc-eQTL 8.48e-01 0.018 0.0933 0.507 PB L2
ENSG00000112306 RPS12 633097 sc-eQTL 2.27e-01 -0.064 0.0527 0.507 PB L2
ENSG00000118515 SGK1 -870446 sc-eQTL 8.94e-01 -0.0115 0.0856 0.507 PB L2
ENSG00000146409 SLC18B1 634327 sc-eQTL 5.68e-01 0.0569 0.0992 0.507 PB L2
ENSG00000028839 TBPL1 -504504 sc-eQTL 9.97e-01 0.00037 0.0887 0.511 Pro_T L2
ENSG00000079950 STX7 934468 sc-eQTL 6.85e-01 0.0322 0.0792 0.511 Pro_T L2
ENSG00000112303 VNN2 684207 sc-eQTL 6.65e-01 -0.0368 0.0849 0.511 Pro_T L2
ENSG00000112306 RPS12 633097 sc-eQTL 3.68e-01 -0.029 0.0321 0.511 Pro_T L2
ENSG00000118515 SGK1 -870446 sc-eQTL 9.96e-01 0.000334 0.0644 0.511 Pro_T L2
ENSG00000146409 SLC18B1 634327 sc-eQTL 3.42e-01 0.079 0.083 0.511 Pro_T L2
ENSG00000028839 TBPL1 -504504 sc-eQTL 4.56e-01 -0.0671 0.0899 0.513 Treg L2
ENSG00000079950 STX7 934468 sc-eQTL 8.79e-01 -0.013 0.0848 0.513 Treg L2
ENSG00000112303 VNN2 684207 sc-eQTL 2.34e-01 0.085 0.0711 0.513 Treg L2
ENSG00000112306 RPS12 633097 sc-eQTL 7.41e-01 0.0104 0.0316 0.513 Treg L2
ENSG00000118515 SGK1 -870446 sc-eQTL 6.40e-01 -0.0312 0.0665 0.513 Treg L2
ENSG00000146409 SLC18B1 634327 sc-eQTL 9.25e-01 -0.00839 0.0892 0.513 Treg L2
ENSG00000028839 TBPL1 -504504 sc-eQTL 8.44e-01 0.0182 0.0923 0.502 cDC L2
ENSG00000079950 STX7 934468 sc-eQTL 7.87e-01 0.0196 0.0724 0.502 cDC L2
ENSG00000093134 VNN3 712901 sc-eQTL 7.92e-01 0.019 0.0719 0.502 cDC L2
ENSG00000112299 VNN1 733611 sc-eQTL 1.43e-01 0.124 0.0841 0.502 cDC L2
ENSG00000112303 VNN2 684207 sc-eQTL 2.90e-01 -0.0872 0.0822 0.502 cDC L2
ENSG00000112306 RPS12 633097 sc-eQTL 8.20e-01 0.00927 0.0407 0.502 cDC L2
ENSG00000118515 SGK1 -870446 sc-eQTL 9.92e-01 -0.000728 0.0686 0.502 cDC L2
ENSG00000146409 SLC18B1 634327 sc-eQTL 9.39e-01 0.00617 0.0806 0.502 cDC L2
ENSG00000286438 AL591115.1 344538 sc-eQTL 7.27e-01 0.0225 0.0644 0.502 cDC L2
ENSG00000286887 AL355881.1 -848635 sc-eQTL 4.16e-01 0.0645 0.0791 0.502 cDC L2
ENSG00000028839 TBPL1 -504504 sc-eQTL 9.94e-01 -0.000609 0.0751 0.513 cMono_IL1B L2
ENSG00000079950 STX7 934468 sc-eQTL 4.65e-01 0.0417 0.0569 0.513 cMono_IL1B L2
ENSG00000093134 VNN3 712901 sc-eQTL 2.13e-01 0.1 0.0803 0.513 cMono_IL1B L2
ENSG00000112299 VNN1 733611 sc-eQTL 8.05e-01 0.0201 0.0813 0.513 cMono_IL1B L2
ENSG00000112303 VNN2 684207 sc-eQTL 5.35e-01 -0.0403 0.0649 0.513 cMono_IL1B L2
ENSG00000112306 RPS12 633097 sc-eQTL 6.11e-01 -0.0184 0.0361 0.513 cMono_IL1B L2
ENSG00000118515 SGK1 -870446 sc-eQTL 9.73e-01 -0.0018 0.0538 0.513 cMono_IL1B L2
ENSG00000146409 SLC18B1 634327 sc-eQTL 8.57e-01 0.0125 0.0696 0.513 cMono_IL1B L2
ENSG00000286887 AL355881.1 -848635 sc-eQTL 9.90e-01 -0.000924 0.0725 0.513 cMono_IL1B L2
ENSG00000028839 TBPL1 -504504 sc-eQTL 5.60e-01 0.0491 0.0842 0.513 cMono_S100A L2
ENSG00000079950 STX7 934468 sc-eQTL 4.20e-01 0.0491 0.0608 0.513 cMono_S100A L2
ENSG00000093134 VNN3 712901 sc-eQTL 3.59e-01 0.0698 0.0759 0.513 cMono_S100A L2
ENSG00000112299 VNN1 733611 sc-eQTL 8.72e-01 -0.0133 0.0825 0.513 cMono_S100A L2
ENSG00000112303 VNN2 684207 sc-eQTL 9.79e-01 0.00141 0.0541 0.513 cMono_S100A L2
ENSG00000112306 RPS12 633097 sc-eQTL 6.43e-01 -0.0181 0.0389 0.513 cMono_S100A L2
ENSG00000118515 SGK1 -870446 sc-eQTL 8.67e-01 0.00744 0.0445 0.513 cMono_S100A L2
ENSG00000146409 SLC18B1 634327 sc-eQTL 7.63e-01 -0.0217 0.072 0.513 cMono_S100A L2
ENSG00000286887 AL355881.1 -848635 sc-eQTL 1.50e-01 -0.101 0.0701 0.513 cMono_S100A L2
ENSG00000028839 TBPL1 -504504 sc-eQTL 9.61e-01 0.0054 0.11 0.506 gdT L2
ENSG00000079950 STX7 934468 sc-eQTL 2.19e-01 0.116 0.094 0.506 gdT L2
ENSG00000112303 VNN2 684207 sc-eQTL 5.98e-02 -0.196 0.103 0.506 gdT L2
ENSG00000112306 RPS12 633097 sc-eQTL 8.00e-01 0.0101 0.0398 0.506 gdT L2
ENSG00000118515 SGK1 -870446 sc-eQTL 5.43e-01 -0.0457 0.0751 0.506 gdT L2
ENSG00000146409 SLC18B1 634327 sc-eQTL 9.70e-01 -0.00384 0.103 0.506 gdT L2
ENSG00000028839 TBPL1 -504504 sc-eQTL 2.46e-01 0.0978 0.084 0.511 intMono L2
ENSG00000079950 STX7 934468 sc-eQTL 6.99e-01 -0.0312 0.0805 0.511 intMono L2
ENSG00000093134 VNN3 712901 sc-eQTL 7.69e-01 0.0239 0.0813 0.511 intMono L2
ENSG00000112299 VNN1 733611 sc-eQTL 9.20e-01 -0.00808 0.0804 0.511 intMono L2
ENSG00000112303 VNN2 684207 sc-eQTL 2.74e-01 -0.0893 0.0814 0.511 intMono L2
ENSG00000112306 RPS12 633097 sc-eQTL 1.88e-01 -0.0467 0.0354 0.511 intMono L2
ENSG00000118515 SGK1 -870446 sc-eQTL 8.51e-01 0.0113 0.0597 0.511 intMono L2
ENSG00000146409 SLC18B1 634327 sc-eQTL 1.26e-01 -0.132 0.086 0.511 intMono L2
ENSG00000286887 AL355881.1 -848635 sc-eQTL 2.78e-01 -0.0898 0.0825 0.511 intMono L2
ENSG00000028839 TBPL1 -504504 sc-eQTL 8.24e-01 0.0197 0.0884 0.509 ncMono L2
ENSG00000079950 STX7 934468 sc-eQTL 8.78e-01 0.0092 0.0597 0.509 ncMono L2
ENSG00000093134 VNN3 712901 sc-eQTL 3.54e-01 0.0782 0.0841 0.509 ncMono L2
ENSG00000112299 VNN1 733611 sc-eQTL 9.32e-01 -0.00711 0.0837 0.509 ncMono L2
ENSG00000112303 VNN2 684207 sc-eQTL 7.01e-01 -0.0309 0.0805 0.509 ncMono L2
ENSG00000112306 RPS12 633097 sc-eQTL 7.03e-01 -0.0154 0.0404 0.509 ncMono L2
ENSG00000118515 SGK1 -870446 sc-eQTL 3.02e-01 0.0589 0.0569 0.509 ncMono L2
ENSG00000146409 SLC18B1 634327 sc-eQTL 7.73e-01 0.0206 0.0713 0.509 ncMono L2
ENSG00000286887 AL355881.1 -848635 sc-eQTL 3.52e-01 0.0701 0.0752 0.509 ncMono L2
ENSG00000028839 TBPL1 -504504 sc-eQTL 7.76e-01 -0.0281 0.0984 0.503 pDC L2
ENSG00000079950 STX7 934468 sc-eQTL 5.97e-01 0.0347 0.0655 0.503 pDC L2
ENSG00000093134 VNN3 712901 sc-eQTL 4.04e-01 -0.055 0.0658 0.503 pDC L2
ENSG00000112299 VNN1 733611 sc-eQTL 1.94e-01 0.0871 0.0668 0.503 pDC L2
ENSG00000112303 VNN2 684207 sc-eQTL 5.15e-02 0.155 0.079 0.503 pDC L2
ENSG00000112306 RPS12 633097 sc-eQTL 9.06e-01 -0.00653 0.055 0.503 pDC L2
ENSG00000118515 SGK1 -870446 sc-eQTL 5.91e-01 0.0301 0.0559 0.503 pDC L2
ENSG00000146409 SLC18B1 634327 sc-eQTL 6.79e-03 -0.218 0.0796 0.503 pDC L2
ENSG00000286438 AL591115.1 344538 sc-eQTL 4.58e-01 0.0579 0.0778 0.503 pDC L2
ENSG00000286887 AL355881.1 -848635 sc-eQTL 7.04e-01 -0.0263 0.0691 0.503 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -504504 sc-eQTL 9.53e-01 0.0052 0.0886 0.513 B_Memory LOneK1K
ENSG00000079950 STX7 934468 sc-eQTL 1.05e-02 0.124 0.048 0.513 B_Memory LOneK1K
ENSG00000112303 VNN2 684207 sc-eQTL 2.23e-01 0.0941 0.0769 0.513 B_Memory LOneK1K
ENSG00000112306 RPS12 633097 sc-eQTL 1.38e-01 0.0652 0.0437 0.513 B_Memory LOneK1K
ENSG00000118515 SGK1 -870446 sc-eQTL 2.95e-01 -0.072 0.0686 0.513 B_Memory LOneK1K
ENSG00000146409 SLC18B1 634327 sc-eQTL 5.90e-01 0.0436 0.0806 0.513 B_Memory LOneK1K
ENSG00000028839 TBPL1 -504504 sc-eQTL 5.75e-01 0.0475 0.0847 0.513 B_Naive LOneK1K
ENSG00000079950 STX7 934468 sc-eQTL 4.48e-01 0.029 0.0381 0.513 B_Naive LOneK1K
ENSG00000112303 VNN2 684207 sc-eQTL 5.10e-01 -0.0489 0.0741 0.513 B_Naive LOneK1K
ENSG00000112306 RPS12 633097 sc-eQTL 4.06e-02 0.0915 0.0444 0.513 B_Naive LOneK1K
ENSG00000118515 SGK1 -870446 sc-eQTL 3.99e-01 -0.0586 0.0693 0.513 B_Naive LOneK1K
ENSG00000146409 SLC18B1 634327 sc-eQTL 3.48e-01 0.0794 0.0844 0.513 B_Naive LOneK1K
ENSG00000028839 TBPL1 -504504 sc-eQTL 9.81e-01 -0.00162 0.0685 0.513 CD14_Mono LOneK1K
ENSG00000079950 STX7 934468 sc-eQTL 3.66e-01 0.0431 0.0475 0.513 CD14_Mono LOneK1K
ENSG00000093134 VNN3 712901 sc-eQTL 2.90e-01 0.0821 0.0774 0.513 CD14_Mono LOneK1K
ENSG00000112299 VNN1 733611 sc-eQTL 8.56e-01 0.0147 0.0809 0.513 CD14_Mono LOneK1K
ENSG00000112303 VNN2 684207 sc-eQTL 5.68e-01 -0.0306 0.0535 0.513 CD14_Mono LOneK1K
ENSG00000112306 RPS12 633097 sc-eQTL 4.84e-01 -0.0257 0.0367 0.513 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -870446 sc-eQTL 7.81e-01 -0.0139 0.05 0.513 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 634327 sc-eQTL 9.30e-01 -0.00571 0.0653 0.513 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -848635 sc-eQTL 5.50e-01 -0.041 0.0684 0.513 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -504504 sc-eQTL 2.74e-01 0.0942 0.0859 0.513 CD16_Mono LOneK1K
ENSG00000079950 STX7 934468 sc-eQTL 8.16e-01 -0.0132 0.0569 0.513 CD16_Mono LOneK1K
ENSG00000093134 VNN3 712901 sc-eQTL 3.92e-01 0.0716 0.0835 0.513 CD16_Mono LOneK1K
ENSG00000112299 VNN1 733611 sc-eQTL 6.84e-01 0.0337 0.0829 0.513 CD16_Mono LOneK1K
ENSG00000112303 VNN2 684207 sc-eQTL 7.52e-01 -0.0247 0.0781 0.513 CD16_Mono LOneK1K
ENSG00000112306 RPS12 633097 sc-eQTL 7.66e-01 -0.0099 0.0332 0.513 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -870446 sc-eQTL 4.52e-01 0.0378 0.0501 0.513 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 634327 sc-eQTL 2.05e-01 -0.102 0.0802 0.513 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -848635 sc-eQTL 3.09e-01 -0.0741 0.0726 0.513 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -504504 sc-eQTL 9.74e-01 0.00232 0.0713 0.515 NK_CD56dim LOneK1K
ENSG00000079950 STX7 934468 sc-eQTL 5.39e-02 0.129 0.0664 0.515 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 684207 sc-eQTL 2.73e-01 -0.0928 0.0845 0.515 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 633097 sc-eQTL 9.48e-01 -0.00227 0.0346 0.515 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -870446 sc-eQTL 1.39e-01 -0.105 0.0711 0.515 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079950 STX7 934468 eQTL 0.0495 0.0305 0.0155 0.0 0.0 0.473

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000112299 \N 733611 2.77e-07 1.35e-07 5.35e-08 1.89e-07 9.87e-08 8.45e-08 1.67e-07 5.43e-08 1.45e-07 6.08e-08 1.63e-07 1.08e-07 1.59e-07 7.37e-08 5.98e-08 7.23e-08 4.12e-08 1.44e-07 6.32e-08 4.8e-08 1.26e-07 1.26e-07 1.5e-07 2.79e-08 1.65e-07 1.25e-07 1.13e-07 9.92e-08 1.22e-07 9.88e-08 1.08e-07 3.03e-08 3.51e-08 8.23e-08 4.92e-08 2.99e-08 5.59e-08 8.72e-08 6.57e-08 3.67e-08 5.34e-08 1.46e-07 5.24e-08 1.27e-08 3.41e-08 1.77e-08 1.2e-07 1.9e-09 4.81e-08