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Genes within 1Mb (chr6:133444716:G:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -507454 sc-eQTL 4.89e-01 0.0602 0.0867 0.323 B L1
ENSG00000079950 STX7 931518 sc-eQTL 1.54e-01 0.0492 0.0344 0.323 B L1
ENSG00000112303 VNN2 681257 sc-eQTL 5.41e-01 -0.0398 0.065 0.323 B L1
ENSG00000112306 RPS12 630147 sc-eQTL 6.93e-01 -0.0155 0.0393 0.323 B L1
ENSG00000118515 SGK1 -873396 sc-eQTL 7.05e-01 -0.023 0.0606 0.323 B L1
ENSG00000146409 SLC18B1 631377 sc-eQTL 3.67e-01 0.0746 0.0826 0.323 B L1
ENSG00000028839 TBPL1 -507454 sc-eQTL 2.98e-01 -0.0666 0.0639 0.323 CD4T L1
ENSG00000079950 STX7 931518 sc-eQTL 3.71e-01 0.0595 0.0665 0.323 CD4T L1
ENSG00000112303 VNN2 681257 sc-eQTL 3.10e-01 0.0586 0.0575 0.323 CD4T L1
ENSG00000112306 RPS12 630147 sc-eQTL 7.46e-01 -0.0127 0.0392 0.323 CD4T L1
ENSG00000118515 SGK1 -873396 sc-eQTL 5.92e-01 -0.0283 0.0527 0.323 CD4T L1
ENSG00000146409 SLC18B1 631377 sc-eQTL 2.14e-01 0.0984 0.079 0.323 CD4T L1
ENSG00000028839 TBPL1 -507454 sc-eQTL 8.93e-01 -0.00857 0.0636 0.323 CD8T L1
ENSG00000079950 STX7 931518 sc-eQTL 2.13e-01 -0.0827 0.0661 0.323 CD8T L1
ENSG00000112303 VNN2 681257 sc-eQTL 8.46e-01 -0.0151 0.0775 0.323 CD8T L1
ENSG00000112306 RPS12 630147 sc-eQTL 3.65e-01 -0.024 0.0264 0.323 CD8T L1
ENSG00000118515 SGK1 -873396 sc-eQTL 9.01e-01 -0.00507 0.0408 0.323 CD8T L1
ENSG00000146409 SLC18B1 631377 sc-eQTL 3.36e-01 0.077 0.0799 0.323 CD8T L1
ENSG00000028839 TBPL1 -507454 sc-eQTL 6.30e-01 0.0464 0.0964 0.331 DC L1
ENSG00000079950 STX7 931518 sc-eQTL 8.16e-01 -0.014 0.0599 0.331 DC L1
ENSG00000093134 VNN3 709951 sc-eQTL 9.93e-01 -0.000615 0.0743 0.331 DC L1
ENSG00000112299 VNN1 730661 sc-eQTL 3.18e-01 0.0801 0.08 0.331 DC L1
ENSG00000112303 VNN2 681257 sc-eQTL 7.14e-01 -0.0315 0.0858 0.331 DC L1
ENSG00000112306 RPS12 630147 sc-eQTL 2.41e-01 -0.0564 0.0479 0.331 DC L1
ENSG00000118515 SGK1 -873396 sc-eQTL 8.97e-01 -0.00721 0.0558 0.331 DC L1
ENSG00000146409 SLC18B1 631377 sc-eQTL 2.23e-01 -0.0928 0.0759 0.331 DC L1
ENSG00000286438 AL591115.1 341588 sc-eQTL 1.80e-01 0.0928 0.069 0.331 DC L1
ENSG00000286887 AL355881.1 -851585 sc-eQTL 3.27e-01 0.0847 0.0862 0.331 DC L1
ENSG00000028839 TBPL1 -507454 sc-eQTL 9.52e-01 0.00403 0.067 0.323 Mono L1
ENSG00000079950 STX7 931518 sc-eQTL 5.26e-01 0.0284 0.0448 0.323 Mono L1
ENSG00000093134 VNN3 709951 sc-eQTL 3.75e-02 -0.159 0.0762 0.323 Mono L1
ENSG00000112299 VNN1 730661 sc-eQTL 1.04e-01 0.134 0.0823 0.323 Mono L1
ENSG00000112303 VNN2 681257 sc-eQTL 9.87e-01 0.000926 0.0584 0.323 Mono L1
ENSG00000112306 RPS12 630147 sc-eQTL 3.37e-01 -0.0336 0.0349 0.323 Mono L1
ENSG00000118515 SGK1 -873396 sc-eQTL 6.48e-01 0.0226 0.0494 0.323 Mono L1
ENSG00000146409 SLC18B1 631377 sc-eQTL 4.19e-01 -0.056 0.0692 0.323 Mono L1
ENSG00000286887 AL355881.1 -851585 sc-eQTL 9.29e-01 -0.00611 0.0681 0.323 Mono L1
ENSG00000028839 TBPL1 -507454 sc-eQTL 5.14e-01 0.0484 0.074 0.322 NK L1
ENSG00000079950 STX7 931518 sc-eQTL 6.64e-01 0.0298 0.0684 0.322 NK L1
ENSG00000112303 VNN2 681257 sc-eQTL 2.30e-01 -0.102 0.0849 0.322 NK L1
ENSG00000112306 RPS12 630147 sc-eQTL 1.21e-01 -0.0546 0.0351 0.322 NK L1
ENSG00000118515 SGK1 -873396 sc-eQTL 3.82e-01 -0.057 0.0651 0.322 NK L1
ENSG00000028839 TBPL1 -507454 sc-eQTL 2.75e-01 -0.0948 0.0866 0.323 Other_T L1
ENSG00000079950 STX7 931518 sc-eQTL 2.59e-01 0.0771 0.0681 0.323 Other_T L1
ENSG00000112303 VNN2 681257 sc-eQTL 4.64e-01 0.0606 0.0825 0.323 Other_T L1
ENSG00000112306 RPS12 630147 sc-eQTL 2.94e-01 -0.0344 0.0327 0.323 Other_T L1
ENSG00000118515 SGK1 -873396 sc-eQTL 7.55e-01 0.0188 0.0603 0.323 Other_T L1
ENSG00000146409 SLC18B1 631377 sc-eQTL 6.78e-01 -0.0373 0.0897 0.323 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -507454 sc-eQTL 5.66e-01 0.0572 0.0994 0.316 B_Activated L2
ENSG00000079950 STX7 931518 sc-eQTL 4.44e-01 -0.0653 0.085 0.316 B_Activated L2
ENSG00000112303 VNN2 681257 sc-eQTL 1.08e-01 0.145 0.09 0.316 B_Activated L2
ENSG00000112306 RPS12 630147 sc-eQTL 9.43e-01 0.00349 0.0486 0.316 B_Activated L2
ENSG00000118515 SGK1 -873396 sc-eQTL 1.65e-01 0.12 0.0861 0.316 B_Activated L2
ENSG00000146409 SLC18B1 631377 sc-eQTL 8.62e-01 -0.0148 0.0851 0.316 B_Activated L2
ENSG00000028839 TBPL1 -507454 sc-eQTL 1.65e-01 0.132 0.0949 0.322 B_Intermediate L2
ENSG00000079950 STX7 931518 sc-eQTL 1.50e-01 0.0788 0.0545 0.322 B_Intermediate L2
ENSG00000112303 VNN2 681257 sc-eQTL 5.48e-01 -0.0496 0.0824 0.322 B_Intermediate L2
ENSG00000112306 RPS12 630147 sc-eQTL 4.98e-01 -0.0342 0.0505 0.322 B_Intermediate L2
ENSG00000118515 SGK1 -873396 sc-eQTL 9.18e-01 0.00902 0.0873 0.322 B_Intermediate L2
ENSG00000146409 SLC18B1 631377 sc-eQTL 4.59e-01 0.0674 0.0909 0.322 B_Intermediate L2
ENSG00000028839 TBPL1 -507454 sc-eQTL 7.96e-01 -0.0239 0.092 0.323 B_Memory L2
ENSG00000079950 STX7 931518 sc-eQTL 1.04e-01 0.108 0.0662 0.323 B_Memory L2
ENSG00000112303 VNN2 681257 sc-eQTL 4.13e-01 0.0714 0.087 0.323 B_Memory L2
ENSG00000112306 RPS12 630147 sc-eQTL 5.99e-01 -0.0221 0.0419 0.323 B_Memory L2
ENSG00000118515 SGK1 -873396 sc-eQTL 3.07e-01 0.0787 0.0768 0.323 B_Memory L2
ENSG00000146409 SLC18B1 631377 sc-eQTL 3.38e-01 0.0839 0.0874 0.323 B_Memory L2
ENSG00000028839 TBPL1 -507454 sc-eQTL 9.95e-01 0.000488 0.0863 0.323 B_Naive1 L2
ENSG00000079950 STX7 931518 sc-eQTL 2.19e-01 0.051 0.0413 0.323 B_Naive1 L2
ENSG00000112303 VNN2 681257 sc-eQTL 1.18e-01 -0.126 0.0801 0.323 B_Naive1 L2
ENSG00000112306 RPS12 630147 sc-eQTL 8.58e-01 0.00824 0.0459 0.323 B_Naive1 L2
ENSG00000118515 SGK1 -873396 sc-eQTL 9.53e-01 -0.00421 0.0718 0.323 B_Naive1 L2
ENSG00000146409 SLC18B1 631377 sc-eQTL 3.60e-01 0.0812 0.0884 0.323 B_Naive1 L2
ENSG00000028839 TBPL1 -507454 sc-eQTL 8.46e-01 0.0178 0.0919 0.322 B_Naive2 L2
ENSG00000079950 STX7 931518 sc-eQTL 1.53e-01 0.0696 0.0486 0.322 B_Naive2 L2
ENSG00000112303 VNN2 681257 sc-eQTL 9.97e-01 -0.000378 0.0896 0.322 B_Naive2 L2
ENSG00000112306 RPS12 630147 sc-eQTL 6.54e-01 0.0213 0.0474 0.322 B_Naive2 L2
ENSG00000118515 SGK1 -873396 sc-eQTL 3.31e-01 0.0815 0.0837 0.322 B_Naive2 L2
ENSG00000146409 SLC18B1 631377 sc-eQTL 6.66e-01 -0.0391 0.0905 0.322 B_Naive2 L2
ENSG00000028839 TBPL1 -507454 sc-eQTL 2.80e-02 0.2 0.0902 0.318 CD4_CTL L2
ENSG00000079950 STX7 931518 sc-eQTL 8.66e-01 -0.0153 0.0907 0.318 CD4_CTL L2
ENSG00000112303 VNN2 681257 sc-eQTL 4.84e-01 0.0641 0.0914 0.318 CD4_CTL L2
ENSG00000112306 RPS12 630147 sc-eQTL 8.87e-01 0.00599 0.0423 0.318 CD4_CTL L2
ENSG00000118515 SGK1 -873396 sc-eQTL 7.06e-01 0.0277 0.0733 0.318 CD4_CTL L2
ENSG00000146409 SLC18B1 631377 sc-eQTL 2.08e-01 0.107 0.0849 0.318 CD4_CTL L2
ENSG00000028839 TBPL1 -507454 sc-eQTL 6.01e-02 -0.138 0.0732 0.323 CD4_Naive L2
ENSG00000079950 STX7 931518 sc-eQTL 4.26e-01 0.0576 0.0722 0.323 CD4_Naive L2
ENSG00000112303 VNN2 681257 sc-eQTL 3.79e-01 0.0589 0.0669 0.323 CD4_Naive L2
ENSG00000112306 RPS12 630147 sc-eQTL 8.99e-01 -0.00551 0.0435 0.323 CD4_Naive L2
ENSG00000118515 SGK1 -873396 sc-eQTL 7.20e-01 0.0191 0.0532 0.323 CD4_Naive L2
ENSG00000146409 SLC18B1 631377 sc-eQTL 5.01e-01 0.0564 0.0836 0.323 CD4_Naive L2
ENSG00000028839 TBPL1 -507454 sc-eQTL 3.10e-01 -0.0798 0.0784 0.323 CD4_TCM L2
ENSG00000079950 STX7 931518 sc-eQTL 5.76e-01 0.0443 0.0791 0.323 CD4_TCM L2
ENSG00000112303 VNN2 681257 sc-eQTL 9.93e-01 0.000693 0.078 0.323 CD4_TCM L2
ENSG00000112306 RPS12 630147 sc-eQTL 2.19e-01 -0.0496 0.0403 0.323 CD4_TCM L2
ENSG00000118515 SGK1 -873396 sc-eQTL 3.77e-01 -0.05 0.0565 0.323 CD4_TCM L2
ENSG00000146409 SLC18B1 631377 sc-eQTL 2.70e-02 0.206 0.0925 0.323 CD4_TCM L2
ENSG00000028839 TBPL1 -507454 sc-eQTL 3.73e-01 0.0813 0.0911 0.323 CD4_TEM L2
ENSG00000079950 STX7 931518 sc-eQTL 6.55e-01 0.0408 0.0913 0.323 CD4_TEM L2
ENSG00000112303 VNN2 681257 sc-eQTL 7.16e-01 0.032 0.0877 0.323 CD4_TEM L2
ENSG00000112306 RPS12 630147 sc-eQTL 7.24e-01 -0.0127 0.036 0.323 CD4_TEM L2
ENSG00000118515 SGK1 -873396 sc-eQTL 4.62e-01 -0.0454 0.0617 0.323 CD4_TEM L2
ENSG00000146409 SLC18B1 631377 sc-eQTL 1.45e-01 0.13 0.0889 0.323 CD4_TEM L2
ENSG00000028839 TBPL1 -507454 sc-eQTL 8.05e-01 0.0201 0.0815 0.323 CD8_CTL L2
ENSG00000079950 STX7 931518 sc-eQTL 1.55e-01 -0.108 0.0758 0.323 CD8_CTL L2
ENSG00000112303 VNN2 681257 sc-eQTL 8.18e-01 -0.0199 0.0865 0.323 CD8_CTL L2
ENSG00000112306 RPS12 630147 sc-eQTL 7.71e-01 -0.0135 0.0463 0.323 CD8_CTL L2
ENSG00000118515 SGK1 -873396 sc-eQTL 3.90e-01 0.0673 0.0781 0.323 CD8_CTL L2
ENSG00000146409 SLC18B1 631377 sc-eQTL 9.77e-01 -0.00261 0.0898 0.323 CD8_CTL L2
ENSG00000028839 TBPL1 -507454 sc-eQTL 7.15e-01 0.0317 0.0867 0.323 CD8_Naive L2
ENSG00000079950 STX7 931518 sc-eQTL 6.16e-01 0.0464 0.0924 0.323 CD8_Naive L2
ENSG00000112303 VNN2 681257 sc-eQTL 3.72e-01 -0.0712 0.0796 0.323 CD8_Naive L2
ENSG00000112306 RPS12 630147 sc-eQTL 1.00e+00 1.76e-05 0.0457 0.323 CD8_Naive L2
ENSG00000118515 SGK1 -873396 sc-eQTL 5.35e-01 -0.0356 0.0573 0.323 CD8_Naive L2
ENSG00000146409 SLC18B1 631377 sc-eQTL 6.87e-01 0.0369 0.0916 0.323 CD8_Naive L2
ENSG00000028839 TBPL1 -507454 sc-eQTL 3.15e-01 -0.0968 0.096 0.324 CD8_TCM L2
ENSG00000079950 STX7 931518 sc-eQTL 3.35e-01 0.086 0.0889 0.324 CD8_TCM L2
ENSG00000112303 VNN2 681257 sc-eQTL 7.80e-01 -0.0247 0.0884 0.324 CD8_TCM L2
ENSG00000112306 RPS12 630147 sc-eQTL 8.34e-02 -0.0745 0.0428 0.324 CD8_TCM L2
ENSG00000118515 SGK1 -873396 sc-eQTL 9.86e-02 0.118 0.0709 0.324 CD8_TCM L2
ENSG00000146409 SLC18B1 631377 sc-eQTL 7.60e-01 -0.0289 0.0945 0.324 CD8_TCM L2
ENSG00000028839 TBPL1 -507454 sc-eQTL 7.55e-01 0.0281 0.0897 0.324 CD8_TEM L2
ENSG00000079950 STX7 931518 sc-eQTL 3.69e-01 -0.088 0.0977 0.324 CD8_TEM L2
ENSG00000112303 VNN2 681257 sc-eQTL 4.33e-02 0.196 0.0963 0.324 CD8_TEM L2
ENSG00000112306 RPS12 630147 sc-eQTL 1.09e-01 0.0837 0.052 0.324 CD8_TEM L2
ENSG00000118515 SGK1 -873396 sc-eQTL 9.76e-01 -0.00256 0.0858 0.324 CD8_TEM L2
ENSG00000146409 SLC18B1 631377 sc-eQTL 4.54e-02 0.197 0.098 0.324 CD8_TEM L2
ENSG00000028839 TBPL1 -507454 sc-eQTL 2.01e-01 -0.117 0.0915 0.32 MAIT L2
ENSG00000079950 STX7 931518 sc-eQTL 6.84e-01 -0.0355 0.0872 0.32 MAIT L2
ENSG00000112303 VNN2 681257 sc-eQTL 6.50e-01 0.0403 0.0887 0.32 MAIT L2
ENSG00000112306 RPS12 630147 sc-eQTL 2.41e-02 -0.0979 0.0431 0.32 MAIT L2
ENSG00000118515 SGK1 -873396 sc-eQTL 5.22e-01 0.0394 0.0614 0.32 MAIT L2
ENSG00000146409 SLC18B1 631377 sc-eQTL 4.90e-01 -0.0631 0.0914 0.32 MAIT L2
ENSG00000028839 TBPL1 -507454 sc-eQTL 4.84e-01 -0.0692 0.0987 0.318 NK_CD56bright L2
ENSG00000079950 STX7 931518 sc-eQTL 6.69e-01 -0.0392 0.0916 0.318 NK_CD56bright L2
ENSG00000112303 VNN2 681257 sc-eQTL 7.64e-01 -0.028 0.0931 0.318 NK_CD56bright L2
ENSG00000112306 RPS12 630147 sc-eQTL 7.37e-01 -0.0174 0.0518 0.318 NK_CD56bright L2
ENSG00000118515 SGK1 -873396 sc-eQTL 7.06e-01 -0.0292 0.0775 0.318 NK_CD56bright L2
ENSG00000028839 TBPL1 -507454 sc-eQTL 6.51e-01 0.0358 0.0791 0.321 NK_CD56dim L2
ENSG00000079950 STX7 931518 sc-eQTL 8.91e-01 -0.00991 0.0724 0.321 NK_CD56dim L2
ENSG00000112303 VNN2 681257 sc-eQTL 7.05e-02 -0.163 0.0899 0.321 NK_CD56dim L2
ENSG00000112306 RPS12 630147 sc-eQTL 1.76e-01 -0.0485 0.0358 0.321 NK_CD56dim L2
ENSG00000118515 SGK1 -873396 sc-eQTL 9.49e-01 0.00508 0.0796 0.321 NK_CD56dim L2
ENSG00000028839 TBPL1 -507454 sc-eQTL 9.18e-01 0.0101 0.0986 0.32 NK_HLA L2
ENSG00000079950 STX7 931518 sc-eQTL 5.46e-01 0.0542 0.0896 0.32 NK_HLA L2
ENSG00000112303 VNN2 681257 sc-eQTL 9.29e-01 0.00806 0.0908 0.32 NK_HLA L2
ENSG00000112306 RPS12 630147 sc-eQTL 3.37e-01 -0.0406 0.0422 0.32 NK_HLA L2
ENSG00000118515 SGK1 -873396 sc-eQTL 2.56e-01 0.0949 0.0833 0.32 NK_HLA L2
ENSG00000028839 TBPL1 -507454 sc-eQTL 8.85e-01 0.0118 0.0817 0.321 NK_cytokine L2
ENSG00000079950 STX7 931518 sc-eQTL 1.12e-01 0.125 0.0786 0.321 NK_cytokine L2
ENSG00000112303 VNN2 681257 sc-eQTL 6.16e-01 -0.0447 0.0889 0.321 NK_cytokine L2
ENSG00000112306 RPS12 630147 sc-eQTL 7.74e-01 -0.0139 0.0483 0.321 NK_cytokine L2
ENSG00000118515 SGK1 -873396 sc-eQTL 4.71e-01 -0.058 0.0802 0.321 NK_cytokine L2
ENSG00000028839 TBPL1 -507454 sc-eQTL 9.55e-01 0.00622 0.111 0.319 PB L2
ENSG00000079950 STX7 931518 sc-eQTL 2.94e-01 -0.0828 0.0786 0.319 PB L2
ENSG00000112303 VNN2 681257 sc-eQTL 5.60e-01 -0.0564 0.0963 0.319 PB L2
ENSG00000112306 RPS12 630147 sc-eQTL 2.02e-01 -0.0698 0.0544 0.319 PB L2
ENSG00000118515 SGK1 -873396 sc-eQTL 8.45e-01 0.0173 0.0884 0.319 PB L2
ENSG00000146409 SLC18B1 631377 sc-eQTL 9.38e-01 -0.00806 0.103 0.319 PB L2
ENSG00000028839 TBPL1 -507454 sc-eQTL 9.34e-01 -0.00767 0.093 0.324 Pro_T L2
ENSG00000079950 STX7 931518 sc-eQTL 8.59e-02 0.142 0.0825 0.324 Pro_T L2
ENSG00000112303 VNN2 681257 sc-eQTL 9.83e-01 -0.00185 0.0891 0.324 Pro_T L2
ENSG00000112306 RPS12 630147 sc-eQTL 5.77e-01 -0.0188 0.0337 0.324 Pro_T L2
ENSG00000118515 SGK1 -873396 sc-eQTL 6.11e-01 0.0344 0.0675 0.324 Pro_T L2
ENSG00000146409 SLC18B1 631377 sc-eQTL 8.09e-01 0.0211 0.0872 0.324 Pro_T L2
ENSG00000028839 TBPL1 -507454 sc-eQTL 6.56e-01 -0.0418 0.0936 0.323 Treg L2
ENSG00000079950 STX7 931518 sc-eQTL 3.34e-01 0.0853 0.0881 0.323 Treg L2
ENSG00000112303 VNN2 681257 sc-eQTL 5.13e-01 0.0487 0.0742 0.323 Treg L2
ENSG00000112306 RPS12 630147 sc-eQTL 4.25e-01 0.0262 0.0328 0.323 Treg L2
ENSG00000118515 SGK1 -873396 sc-eQTL 9.58e-01 -0.00368 0.0692 0.323 Treg L2
ENSG00000146409 SLC18B1 631377 sc-eQTL 9.71e-01 0.00341 0.0929 0.323 Treg L2
ENSG00000028839 TBPL1 -507454 sc-eQTL 7.94e-01 0.0257 0.0986 0.327 cDC L2
ENSG00000079950 STX7 931518 sc-eQTL 6.95e-01 0.0304 0.0774 0.327 cDC L2
ENSG00000093134 VNN3 709951 sc-eQTL 7.87e-01 -0.0208 0.0769 0.327 cDC L2
ENSG00000112299 VNN1 730661 sc-eQTL 4.87e-01 0.0628 0.0903 0.327 cDC L2
ENSG00000112303 VNN2 681257 sc-eQTL 9.72e-01 0.00315 0.0881 0.327 cDC L2
ENSG00000112306 RPS12 630147 sc-eQTL 5.96e-01 -0.0231 0.0434 0.327 cDC L2
ENSG00000118515 SGK1 -873396 sc-eQTL 3.37e-01 0.0703 0.0731 0.327 cDC L2
ENSG00000146409 SLC18B1 631377 sc-eQTL 4.56e-01 0.0643 0.086 0.327 cDC L2
ENSG00000286438 AL591115.1 341588 sc-eQTL 7.57e-01 -0.0213 0.0688 0.327 cDC L2
ENSG00000286887 AL355881.1 -851585 sc-eQTL 1.74e-01 0.115 0.0843 0.327 cDC L2
ENSG00000028839 TBPL1 -507454 sc-eQTL 7.78e-01 0.0216 0.0764 0.323 cMono_IL1B L2
ENSG00000079950 STX7 931518 sc-eQTL 7.73e-01 0.0168 0.058 0.323 cMono_IL1B L2
ENSG00000093134 VNN3 709951 sc-eQTL 1.82e-01 -0.109 0.0816 0.323 cMono_IL1B L2
ENSG00000112299 VNN1 730661 sc-eQTL 2.47e-01 0.0957 0.0824 0.323 cMono_IL1B L2
ENSG00000112303 VNN2 681257 sc-eQTL 8.89e-01 0.00923 0.0661 0.323 cMono_IL1B L2
ENSG00000112306 RPS12 630147 sc-eQTL 3.36e-01 -0.0353 0.0366 0.323 cMono_IL1B L2
ENSG00000118515 SGK1 -873396 sc-eQTL 8.21e-01 0.0124 0.0547 0.323 cMono_IL1B L2
ENSG00000146409 SLC18B1 631377 sc-eQTL 5.99e-01 -0.0373 0.0708 0.323 cMono_IL1B L2
ENSG00000286887 AL355881.1 -851585 sc-eQTL 9.58e-01 0.00391 0.0737 0.323 cMono_IL1B L2
ENSG00000028839 TBPL1 -507454 sc-eQTL 5.65e-01 -0.0499 0.0865 0.323 cMono_S100A L2
ENSG00000079950 STX7 931518 sc-eQTL 5.03e-02 0.122 0.062 0.323 cMono_S100A L2
ENSG00000093134 VNN3 709951 sc-eQTL 1.42e-02 -0.19 0.077 0.323 cMono_S100A L2
ENSG00000112299 VNN1 730661 sc-eQTL 7.78e-02 0.149 0.0842 0.323 cMono_S100A L2
ENSG00000112303 VNN2 681257 sc-eQTL 5.84e-01 -0.0304 0.0555 0.323 cMono_S100A L2
ENSG00000112306 RPS12 630147 sc-eQTL 6.26e-01 -0.0195 0.04 0.323 cMono_S100A L2
ENSG00000118515 SGK1 -873396 sc-eQTL 1.79e-01 0.0613 0.0455 0.323 cMono_S100A L2
ENSG00000146409 SLC18B1 631377 sc-eQTL 3.59e-01 -0.068 0.0739 0.323 cMono_S100A L2
ENSG00000286887 AL355881.1 -851585 sc-eQTL 5.39e-01 -0.0445 0.0723 0.323 cMono_S100A L2
ENSG00000028839 TBPL1 -507454 sc-eQTL 5.54e-01 0.0699 0.118 0.318 gdT L2
ENSG00000079950 STX7 931518 sc-eQTL 7.84e-03 0.267 0.099 0.318 gdT L2
ENSG00000112303 VNN2 681257 sc-eQTL 2.36e-01 -0.133 0.112 0.318 gdT L2
ENSG00000112306 RPS12 630147 sc-eQTL 8.34e-01 -0.00898 0.0428 0.318 gdT L2
ENSG00000118515 SGK1 -873396 sc-eQTL 6.47e-03 0.217 0.0786 0.318 gdT L2
ENSG00000146409 SLC18B1 631377 sc-eQTL 3.86e-01 0.0958 0.11 0.318 gdT L2
ENSG00000028839 TBPL1 -507454 sc-eQTL 6.46e-01 0.041 0.089 0.329 intMono L2
ENSG00000079950 STX7 931518 sc-eQTL 6.03e-01 -0.0443 0.085 0.329 intMono L2
ENSG00000093134 VNN3 709951 sc-eQTL 2.07e-02 -0.198 0.0847 0.329 intMono L2
ENSG00000112299 VNN1 730661 sc-eQTL 4.91e-02 0.166 0.0841 0.329 intMono L2
ENSG00000112303 VNN2 681257 sc-eQTL 6.83e-01 0.0353 0.0862 0.329 intMono L2
ENSG00000112306 RPS12 630147 sc-eQTL 2.47e-01 -0.0434 0.0374 0.329 intMono L2
ENSG00000118515 SGK1 -873396 sc-eQTL 7.81e-01 -0.0176 0.0631 0.329 intMono L2
ENSG00000146409 SLC18B1 631377 sc-eQTL 2.06e-01 0.116 0.091 0.329 intMono L2
ENSG00000286887 AL355881.1 -851585 sc-eQTL 8.88e-01 0.0123 0.0874 0.329 intMono L2
ENSG00000028839 TBPL1 -507454 sc-eQTL 9.08e-01 0.0109 0.0947 0.324 ncMono L2
ENSG00000079950 STX7 931518 sc-eQTL 4.28e-01 -0.0508 0.064 0.324 ncMono L2
ENSG00000093134 VNN3 709951 sc-eQTL 9.74e-01 0.00301 0.0904 0.324 ncMono L2
ENSG00000112299 VNN1 730661 sc-eQTL 3.28e-01 0.0877 0.0895 0.324 ncMono L2
ENSG00000112303 VNN2 681257 sc-eQTL 3.44e-01 0.0816 0.0861 0.324 ncMono L2
ENSG00000112306 RPS12 630147 sc-eQTL 5.45e-01 -0.0262 0.0432 0.324 ncMono L2
ENSG00000118515 SGK1 -873396 sc-eQTL 8.88e-03 0.159 0.0602 0.324 ncMono L2
ENSG00000146409 SLC18B1 631377 sc-eQTL 4.99e-01 -0.0518 0.0763 0.324 ncMono L2
ENSG00000286887 AL355881.1 -851585 sc-eQTL 4.78e-02 0.159 0.08 0.324 ncMono L2
ENSG00000028839 TBPL1 -507454 sc-eQTL 3.24e-01 -0.108 0.109 0.328 pDC L2
ENSG00000079950 STX7 931518 sc-eQTL 5.54e-01 -0.0432 0.0728 0.328 pDC L2
ENSG00000093134 VNN3 709951 sc-eQTL 4.63e-01 -0.0538 0.0732 0.328 pDC L2
ENSG00000112299 VNN1 730661 sc-eQTL 2.16e-01 0.0922 0.0743 0.328 pDC L2
ENSG00000112303 VNN2 681257 sc-eQTL 3.16e-01 -0.089 0.0886 0.328 pDC L2
ENSG00000112306 RPS12 630147 sc-eQTL 8.61e-01 -0.0107 0.0612 0.328 pDC L2
ENSG00000118515 SGK1 -873396 sc-eQTL 4.87e-01 0.0433 0.0621 0.328 pDC L2
ENSG00000146409 SLC18B1 631377 sc-eQTL 1.87e-02 -0.211 0.089 0.328 pDC L2
ENSG00000286438 AL591115.1 341588 sc-eQTL 4.26e-01 0.069 0.0865 0.328 pDC L2
ENSG00000286887 AL355881.1 -851585 sc-eQTL 5.29e-01 0.0485 0.0768 0.328 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -507454 sc-eQTL 1.10e-01 0.15 0.0936 0.323 B_Memory LOneK1K
ENSG00000079950 STX7 931518 sc-eQTL 1.24e-01 0.0796 0.0515 0.323 B_Memory LOneK1K
ENSG00000112303 VNN2 681257 sc-eQTL 3.99e-01 0.0692 0.0818 0.323 B_Memory LOneK1K
ENSG00000112306 RPS12 630147 sc-eQTL 8.89e-01 -0.00655 0.0467 0.323 B_Memory LOneK1K
ENSG00000118515 SGK1 -873396 sc-eQTL 3.95e-01 0.0621 0.0729 0.323 B_Memory LOneK1K
ENSG00000146409 SLC18B1 631377 sc-eQTL 8.50e-02 0.147 0.0851 0.323 B_Memory LOneK1K
ENSG00000028839 TBPL1 -507454 sc-eQTL 8.38e-01 0.0177 0.0864 0.323 B_Naive LOneK1K
ENSG00000079950 STX7 931518 sc-eQTL 1.03e-01 0.0633 0.0387 0.323 B_Naive LOneK1K
ENSG00000112303 VNN2 681257 sc-eQTL 2.85e-01 -0.0808 0.0754 0.323 B_Naive LOneK1K
ENSG00000112306 RPS12 630147 sc-eQTL 7.95e-01 0.0119 0.0457 0.323 B_Naive LOneK1K
ENSG00000118515 SGK1 -873396 sc-eQTL 9.53e-01 0.00416 0.0708 0.323 B_Naive LOneK1K
ENSG00000146409 SLC18B1 631377 sc-eQTL 6.83e-01 0.0353 0.0863 0.323 B_Naive LOneK1K
ENSG00000028839 TBPL1 -507454 sc-eQTL 7.81e-01 -0.0193 0.0695 0.323 CD14_Mono LOneK1K
ENSG00000079950 STX7 931518 sc-eQTL 2.38e-01 0.0571 0.0482 0.323 CD14_Mono LOneK1K
ENSG00000093134 VNN3 709951 sc-eQTL 3.99e-02 -0.161 0.0781 0.323 CD14_Mono LOneK1K
ENSG00000112299 VNN1 730661 sc-eQTL 6.65e-02 0.15 0.0816 0.323 CD14_Mono LOneK1K
ENSG00000112303 VNN2 681257 sc-eQTL 9.89e-01 0.000738 0.0544 0.323 CD14_Mono LOneK1K
ENSG00000112306 RPS12 630147 sc-eQTL 3.49e-01 -0.0349 0.0372 0.323 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -873396 sc-eQTL 6.81e-01 0.0209 0.0508 0.323 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 631377 sc-eQTL 3.56e-01 -0.0612 0.0662 0.323 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -851585 sc-eQTL 6.66e-01 -0.0301 0.0695 0.323 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -507454 sc-eQTL 9.22e-01 0.00892 0.0911 0.323 CD16_Mono LOneK1K
ENSG00000079950 STX7 931518 sc-eQTL 1.08e-01 -0.0963 0.0597 0.323 CD16_Mono LOneK1K
ENSG00000093134 VNN3 709951 sc-eQTL 1.04e-01 -0.143 0.0879 0.323 CD16_Mono LOneK1K
ENSG00000112299 VNN1 730661 sc-eQTL 1.88e-01 0.115 0.0872 0.323 CD16_Mono LOneK1K
ENSG00000112303 VNN2 681257 sc-eQTL 2.09e-01 0.104 0.0823 0.323 CD16_Mono LOneK1K
ENSG00000112306 RPS12 630147 sc-eQTL 5.66e-01 -0.0201 0.035 0.323 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -873396 sc-eQTL 2.11e-01 0.0663 0.0529 0.323 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 631377 sc-eQTL 9.55e-01 0.00483 0.0851 0.323 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -851585 sc-eQTL 3.68e-01 0.0693 0.0768 0.323 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -507454 sc-eQTL 4.71e-01 0.0527 0.0731 0.321 NK_CD56dim LOneK1K
ENSG00000079950 STX7 931518 sc-eQTL 5.71e-01 0.0389 0.0687 0.321 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 681257 sc-eQTL 1.62e-01 -0.122 0.0866 0.321 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 630147 sc-eQTL 1.38e-01 -0.0526 0.0353 0.321 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -873396 sc-eQTL 6.71e-01 -0.0312 0.0733 0.321 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079950 STX7 931518 eQTL 0.00207 0.0513 0.0166 0.0 0.0 0.314
ENSG00000112299 VNN1 730661 pQTL 0.000737 0.125 0.0369 0.0 0.0 0.328
ENSG00000112303 VNN2 681257 eQTL 0.0349 0.0287 0.0136 0.0 0.0 0.314
ENSG00000146409 SLC18B1 631377 eQTL 0.00448 0.0666 0.0234 0.0 0.0 0.314

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina