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Genes within 1Mb (chr6:133435362:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -516808 sc-eQTL 6.38e-01 0.0405 0.0861 0.327 B L1
ENSG00000079950 STX7 922164 sc-eQTL 9.55e-02 0.0571 0.0341 0.327 B L1
ENSG00000112303 VNN2 671903 sc-eQTL 6.12e-01 -0.0328 0.0645 0.327 B L1
ENSG00000112306 RPS12 620793 sc-eQTL 5.58e-01 -0.0229 0.039 0.327 B L1
ENSG00000118515 SGK1 -882750 sc-eQTL 5.71e-01 -0.0341 0.0601 0.327 B L1
ENSG00000146409 SLC18B1 622023 sc-eQTL 4.47e-01 0.0625 0.082 0.327 B L1
ENSG00000028839 TBPL1 -516808 sc-eQTL 2.78e-01 -0.0688 0.0632 0.327 CD4T L1
ENSG00000079950 STX7 922164 sc-eQTL 4.94e-01 0.0451 0.0659 0.327 CD4T L1
ENSG00000112303 VNN2 671903 sc-eQTL 3.99e-01 0.0482 0.057 0.327 CD4T L1
ENSG00000112306 RPS12 620793 sc-eQTL 7.10e-01 -0.0144 0.0388 0.327 CD4T L1
ENSG00000118515 SGK1 -882750 sc-eQTL 4.81e-01 -0.0368 0.0521 0.327 CD4T L1
ENSG00000146409 SLC18B1 622023 sc-eQTL 1.96e-01 0.102 0.0782 0.327 CD4T L1
ENSG00000028839 TBPL1 -516808 sc-eQTL 6.42e-01 -0.0292 0.0628 0.327 CD8T L1
ENSG00000079950 STX7 922164 sc-eQTL 1.78e-01 -0.0882 0.0653 0.327 CD8T L1
ENSG00000112303 VNN2 671903 sc-eQTL 7.17e-01 -0.0277 0.0765 0.327 CD8T L1
ENSG00000112306 RPS12 620793 sc-eQTL 4.62e-01 -0.0192 0.0261 0.327 CD8T L1
ENSG00000118515 SGK1 -882750 sc-eQTL 8.68e-01 -0.00671 0.0403 0.327 CD8T L1
ENSG00000146409 SLC18B1 622023 sc-eQTL 2.19e-01 0.0971 0.0788 0.327 CD8T L1
ENSG00000028839 TBPL1 -516808 sc-eQTL 5.92e-01 0.0513 0.0956 0.333 DC L1
ENSG00000079950 STX7 922164 sc-eQTL 7.37e-01 -0.02 0.0594 0.333 DC L1
ENSG00000093134 VNN3 700597 sc-eQTL 9.28e-01 0.00669 0.0737 0.333 DC L1
ENSG00000112299 VNN1 721307 sc-eQTL 2.56e-01 0.0903 0.0793 0.333 DC L1
ENSG00000112303 VNN2 671903 sc-eQTL 6.46e-01 -0.0392 0.0851 0.333 DC L1
ENSG00000112306 RPS12 620793 sc-eQTL 2.37e-01 -0.0564 0.0476 0.333 DC L1
ENSG00000118515 SGK1 -882750 sc-eQTL 8.41e-01 -0.0111 0.0554 0.333 DC L1
ENSG00000146409 SLC18B1 622023 sc-eQTL 1.94e-01 -0.098 0.0752 0.333 DC L1
ENSG00000286438 AL591115.1 332234 sc-eQTL 1.73e-01 0.0935 0.0684 0.333 DC L1
ENSG00000286887 AL355881.1 -860939 sc-eQTL 3.47e-01 0.0807 0.0855 0.333 DC L1
ENSG00000028839 TBPL1 -516808 sc-eQTL 9.73e-01 0.00221 0.0662 0.327 Mono L1
ENSG00000079950 STX7 922164 sc-eQTL 4.25e-01 0.0353 0.0442 0.327 Mono L1
ENSG00000093134 VNN3 700597 sc-eQTL 3.45e-02 -0.16 0.0752 0.327 Mono L1
ENSG00000112299 VNN1 721307 sc-eQTL 8.41e-02 0.141 0.0812 0.327 Mono L1
ENSG00000112303 VNN2 671903 sc-eQTL 9.99e-01 -0.000104 0.0577 0.327 Mono L1
ENSG00000112306 RPS12 620793 sc-eQTL 3.15e-01 -0.0347 0.0345 0.327 Mono L1
ENSG00000118515 SGK1 -882750 sc-eQTL 6.15e-01 0.0246 0.0488 0.327 Mono L1
ENSG00000146409 SLC18B1 622023 sc-eQTL 3.66e-01 -0.0619 0.0683 0.327 Mono L1
ENSG00000286887 AL355881.1 -860939 sc-eQTL 9.60e-01 -0.00341 0.0673 0.327 Mono L1
ENSG00000028839 TBPL1 -516808 sc-eQTL 5.31e-01 0.046 0.0733 0.326 NK L1
ENSG00000079950 STX7 922164 sc-eQTL 7.49e-01 0.0217 0.0679 0.326 NK L1
ENSG00000112303 VNN2 671903 sc-eQTL 3.04e-01 -0.0868 0.0843 0.326 NK L1
ENSG00000112306 RPS12 620793 sc-eQTL 1.41e-01 -0.0513 0.0348 0.326 NK L1
ENSG00000118515 SGK1 -882750 sc-eQTL 4.55e-01 -0.0484 0.0646 0.326 NK L1
ENSG00000028839 TBPL1 -516808 sc-eQTL 3.24e-01 -0.0852 0.0861 0.327 Other_T L1
ENSG00000079950 STX7 922164 sc-eQTL 2.61e-01 0.0763 0.0677 0.327 Other_T L1
ENSG00000112303 VNN2 671903 sc-eQTL 4.06e-01 0.0683 0.082 0.327 Other_T L1
ENSG00000112306 RPS12 620793 sc-eQTL 4.09e-01 -0.0269 0.0325 0.327 Other_T L1
ENSG00000118515 SGK1 -882750 sc-eQTL 8.07e-01 0.0147 0.0599 0.327 Other_T L1
ENSG00000146409 SLC18B1 622023 sc-eQTL 7.27e-01 -0.0312 0.0892 0.327 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -516808 sc-eQTL 5.88e-01 0.0539 0.0993 0.319 B_Activated L2
ENSG00000079950 STX7 922164 sc-eQTL 5.43e-01 -0.0519 0.085 0.319 B_Activated L2
ENSG00000112303 VNN2 671903 sc-eQTL 8.07e-02 0.158 0.0898 0.319 B_Activated L2
ENSG00000112306 RPS12 620793 sc-eQTL 9.18e-01 0.00498 0.0485 0.319 B_Activated L2
ENSG00000118515 SGK1 -882750 sc-eQTL 1.89e-01 0.114 0.0861 0.319 B_Activated L2
ENSG00000146409 SLC18B1 622023 sc-eQTL 7.98e-01 -0.0218 0.085 0.319 B_Activated L2
ENSG00000028839 TBPL1 -516808 sc-eQTL 2.18e-01 0.117 0.0943 0.326 B_Intermediate L2
ENSG00000079950 STX7 922164 sc-eQTL 1.03e-01 0.0886 0.054 0.326 B_Intermediate L2
ENSG00000112303 VNN2 671903 sc-eQTL 6.41e-01 -0.0383 0.0819 0.326 B_Intermediate L2
ENSG00000112306 RPS12 620793 sc-eQTL 3.47e-01 -0.0471 0.0501 0.326 B_Intermediate L2
ENSG00000118515 SGK1 -882750 sc-eQTL 9.95e-01 0.000587 0.0867 0.326 B_Intermediate L2
ENSG00000146409 SLC18B1 622023 sc-eQTL 4.36e-01 0.0704 0.0902 0.326 B_Intermediate L2
ENSG00000028839 TBPL1 -516808 sc-eQTL 6.88e-01 -0.0367 0.0913 0.328 B_Memory L2
ENSG00000079950 STX7 922164 sc-eQTL 8.29e-02 0.114 0.0656 0.328 B_Memory L2
ENSG00000112303 VNN2 671903 sc-eQTL 5.27e-01 0.0547 0.0863 0.328 B_Memory L2
ENSG00000112306 RPS12 620793 sc-eQTL 4.99e-01 -0.0282 0.0416 0.328 B_Memory L2
ENSG00000118515 SGK1 -882750 sc-eQTL 3.75e-01 0.0678 0.0762 0.328 B_Memory L2
ENSG00000146409 SLC18B1 622023 sc-eQTL 3.00e-01 0.0901 0.0867 0.328 B_Memory L2
ENSG00000028839 TBPL1 -516808 sc-eQTL 9.20e-01 -0.00864 0.0856 0.327 B_Naive1 L2
ENSG00000079950 STX7 922164 sc-eQTL 1.57e-01 0.0582 0.041 0.327 B_Naive1 L2
ENSG00000112303 VNN2 671903 sc-eQTL 9.56e-02 -0.133 0.0794 0.327 B_Naive1 L2
ENSG00000112306 RPS12 620793 sc-eQTL 9.44e-01 -0.00319 0.0455 0.327 B_Naive1 L2
ENSG00000118515 SGK1 -882750 sc-eQTL 8.40e-01 -0.0144 0.0712 0.327 B_Naive1 L2
ENSG00000146409 SLC18B1 622023 sc-eQTL 4.39e-01 0.068 0.0877 0.327 B_Naive1 L2
ENSG00000028839 TBPL1 -516808 sc-eQTL 9.12e-01 0.01 0.091 0.326 B_Naive2 L2
ENSG00000079950 STX7 922164 sc-eQTL 7.71e-02 0.0853 0.048 0.326 B_Naive2 L2
ENSG00000112303 VNN2 671903 sc-eQTL 8.90e-01 0.0123 0.0888 0.326 B_Naive2 L2
ENSG00000112306 RPS12 620793 sc-eQTL 7.99e-01 0.012 0.047 0.326 B_Naive2 L2
ENSG00000118515 SGK1 -882750 sc-eQTL 3.77e-01 0.0734 0.0829 0.326 B_Naive2 L2
ENSG00000146409 SLC18B1 622023 sc-eQTL 4.45e-01 -0.0685 0.0895 0.326 B_Naive2 L2
ENSG00000028839 TBPL1 -516808 sc-eQTL 2.36e-02 0.206 0.0901 0.32 CD4_CTL L2
ENSG00000079950 STX7 922164 sc-eQTL 9.56e-01 -0.00498 0.0907 0.32 CD4_CTL L2
ENSG00000112303 VNN2 671903 sc-eQTL 5.64e-01 0.0528 0.0914 0.32 CD4_CTL L2
ENSG00000112306 RPS12 620793 sc-eQTL 8.64e-01 0.00725 0.0423 0.32 CD4_CTL L2
ENSG00000118515 SGK1 -882750 sc-eQTL 6.28e-01 0.0355 0.0733 0.32 CD4_CTL L2
ENSG00000146409 SLC18B1 622023 sc-eQTL 1.54e-01 0.121 0.0848 0.32 CD4_CTL L2
ENSG00000028839 TBPL1 -516808 sc-eQTL 4.66e-02 -0.145 0.0724 0.327 CD4_Naive L2
ENSG00000079950 STX7 922164 sc-eQTL 5.80e-01 0.0397 0.0716 0.327 CD4_Naive L2
ENSG00000112303 VNN2 671903 sc-eQTL 4.86e-01 0.0463 0.0663 0.327 CD4_Naive L2
ENSG00000112306 RPS12 620793 sc-eQTL 7.74e-01 -0.0124 0.0431 0.327 CD4_Naive L2
ENSG00000118515 SGK1 -882750 sc-eQTL 8.91e-01 0.00721 0.0528 0.327 CD4_Naive L2
ENSG00000146409 SLC18B1 622023 sc-eQTL 5.04e-01 0.0554 0.0828 0.327 CD4_Naive L2
ENSG00000028839 TBPL1 -516808 sc-eQTL 3.66e-01 -0.0703 0.0776 0.327 CD4_TCM L2
ENSG00000079950 STX7 922164 sc-eQTL 6.73e-01 0.0331 0.0782 0.327 CD4_TCM L2
ENSG00000112303 VNN2 671903 sc-eQTL 9.28e-01 0.00698 0.0771 0.327 CD4_TCM L2
ENSG00000112306 RPS12 620793 sc-eQTL 2.18e-01 -0.0492 0.0398 0.327 CD4_TCM L2
ENSG00000118515 SGK1 -882750 sc-eQTL 3.48e-01 -0.0525 0.0558 0.327 CD4_TCM L2
ENSG00000146409 SLC18B1 622023 sc-eQTL 1.91e-02 0.216 0.0914 0.327 CD4_TCM L2
ENSG00000028839 TBPL1 -516808 sc-eQTL 3.29e-01 0.0885 0.0905 0.327 CD4_TEM L2
ENSG00000079950 STX7 922164 sc-eQTL 6.12e-01 0.046 0.0907 0.327 CD4_TEM L2
ENSG00000112303 VNN2 671903 sc-eQTL 8.33e-01 0.0184 0.0871 0.327 CD4_TEM L2
ENSG00000112306 RPS12 620793 sc-eQTL 6.16e-01 -0.0179 0.0357 0.327 CD4_TEM L2
ENSG00000118515 SGK1 -882750 sc-eQTL 4.62e-01 -0.0452 0.0613 0.327 CD4_TEM L2
ENSG00000146409 SLC18B1 622023 sc-eQTL 1.28e-01 0.135 0.0883 0.327 CD4_TEM L2
ENSG00000028839 TBPL1 -516808 sc-eQTL 7.52e-01 0.0258 0.0815 0.327 CD8_CTL L2
ENSG00000079950 STX7 922164 sc-eQTL 1.79e-01 -0.102 0.0759 0.327 CD8_CTL L2
ENSG00000112303 VNN2 671903 sc-eQTL 9.51e-01 -0.00534 0.0866 0.327 CD8_CTL L2
ENSG00000112306 RPS12 620793 sc-eQTL 9.38e-01 -0.0036 0.0463 0.327 CD8_CTL L2
ENSG00000118515 SGK1 -882750 sc-eQTL 3.93e-01 0.0669 0.0781 0.327 CD8_CTL L2
ENSG00000146409 SLC18B1 622023 sc-eQTL 9.37e-01 -0.00709 0.0898 0.327 CD8_CTL L2
ENSG00000028839 TBPL1 -516808 sc-eQTL 9.15e-01 0.00921 0.0858 0.327 CD8_Naive L2
ENSG00000079950 STX7 922164 sc-eQTL 7.22e-01 0.0326 0.0914 0.327 CD8_Naive L2
ENSG00000112303 VNN2 671903 sc-eQTL 2.19e-01 -0.097 0.0786 0.327 CD8_Naive L2
ENSG00000112306 RPS12 620793 sc-eQTL 9.54e-01 0.00263 0.0452 0.327 CD8_Naive L2
ENSG00000118515 SGK1 -882750 sc-eQTL 4.56e-01 -0.0423 0.0566 0.327 CD8_Naive L2
ENSG00000146409 SLC18B1 622023 sc-eQTL 6.36e-01 0.0429 0.0906 0.327 CD8_Naive L2
ENSG00000028839 TBPL1 -516808 sc-eQTL 3.06e-01 -0.0987 0.0961 0.326 CD8_TCM L2
ENSG00000079950 STX7 922164 sc-eQTL 3.23e-01 0.0882 0.089 0.326 CD8_TCM L2
ENSG00000112303 VNN2 671903 sc-eQTL 7.25e-01 -0.0312 0.0885 0.326 CD8_TCM L2
ENSG00000112306 RPS12 620793 sc-eQTL 9.23e-02 -0.0725 0.0428 0.326 CD8_TCM L2
ENSG00000118515 SGK1 -882750 sc-eQTL 9.72e-02 0.118 0.0709 0.326 CD8_TCM L2
ENSG00000146409 SLC18B1 622023 sc-eQTL 8.58e-01 -0.017 0.0946 0.326 CD8_TCM L2
ENSG00000028839 TBPL1 -516808 sc-eQTL 8.95e-01 0.0117 0.0889 0.329 CD8_TEM L2
ENSG00000079950 STX7 922164 sc-eQTL 3.23e-01 -0.0958 0.0968 0.329 CD8_TEM L2
ENSG00000112303 VNN2 671903 sc-eQTL 3.71e-02 0.2 0.0954 0.329 CD8_TEM L2
ENSG00000112306 RPS12 620793 sc-eQTL 9.81e-02 0.0857 0.0515 0.329 CD8_TEM L2
ENSG00000118515 SGK1 -882750 sc-eQTL 9.09e-01 -0.00978 0.085 0.329 CD8_TEM L2
ENSG00000146409 SLC18B1 622023 sc-eQTL 3.64e-02 0.204 0.097 0.329 CD8_TEM L2
ENSG00000028839 TBPL1 -516808 sc-eQTL 3.95e-01 -0.0777 0.091 0.325 MAIT L2
ENSG00000079950 STX7 922164 sc-eQTL 7.67e-01 -0.0257 0.0866 0.325 MAIT L2
ENSG00000112303 VNN2 671903 sc-eQTL 5.87e-01 0.048 0.0881 0.325 MAIT L2
ENSG00000112306 RPS12 620793 sc-eQTL 2.58e-02 -0.0962 0.0428 0.325 MAIT L2
ENSG00000118515 SGK1 -882750 sc-eQTL 3.02e-01 0.063 0.0609 0.325 MAIT L2
ENSG00000146409 SLC18B1 622023 sc-eQTL 4.92e-01 -0.0625 0.0908 0.325 MAIT L2
ENSG00000028839 TBPL1 -516808 sc-eQTL 5.69e-01 -0.0557 0.0977 0.322 NK_CD56bright L2
ENSG00000079950 STX7 922164 sc-eQTL 6.95e-01 -0.0356 0.0906 0.322 NK_CD56bright L2
ENSG00000112303 VNN2 671903 sc-eQTL 6.73e-01 -0.0388 0.092 0.322 NK_CD56bright L2
ENSG00000112306 RPS12 620793 sc-eQTL 9.06e-01 -0.00607 0.0513 0.322 NK_CD56bright L2
ENSG00000118515 SGK1 -882750 sc-eQTL 9.38e-01 -0.00593 0.0767 0.322 NK_CD56bright L2
ENSG00000028839 TBPL1 -516808 sc-eQTL 5.48e-01 0.0472 0.0784 0.325 NK_CD56dim L2
ENSG00000079950 STX7 922164 sc-eQTL 8.18e-01 -0.0165 0.0718 0.325 NK_CD56dim L2
ENSG00000112303 VNN2 671903 sc-eQTL 8.74e-02 -0.153 0.0892 0.325 NK_CD56dim L2
ENSG00000112306 RPS12 620793 sc-eQTL 1.86e-01 -0.0471 0.0355 0.325 NK_CD56dim L2
ENSG00000118515 SGK1 -882750 sc-eQTL 9.36e-01 0.00631 0.079 0.325 NK_CD56dim L2
ENSG00000028839 TBPL1 -516808 sc-eQTL 9.85e-01 -0.00181 0.0977 0.324 NK_HLA L2
ENSG00000079950 STX7 922164 sc-eQTL 6.92e-01 0.0352 0.0889 0.324 NK_HLA L2
ENSG00000112303 VNN2 671903 sc-eQTL 7.97e-01 0.0232 0.09 0.324 NK_HLA L2
ENSG00000112306 RPS12 620793 sc-eQTL 3.66e-01 -0.0379 0.0418 0.324 NK_HLA L2
ENSG00000118515 SGK1 -882750 sc-eQTL 1.38e-01 0.123 0.0824 0.324 NK_HLA L2
ENSG00000028839 TBPL1 -516808 sc-eQTL 9.23e-01 0.00781 0.0811 0.325 NK_cytokine L2
ENSG00000079950 STX7 922164 sc-eQTL 1.34e-01 0.118 0.0781 0.325 NK_cytokine L2
ENSG00000112303 VNN2 671903 sc-eQTL 6.83e-01 -0.0361 0.0883 0.325 NK_cytokine L2
ENSG00000112306 RPS12 620793 sc-eQTL 8.02e-01 -0.012 0.0479 0.325 NK_cytokine L2
ENSG00000118515 SGK1 -882750 sc-eQTL 4.59e-01 -0.059 0.0796 0.325 NK_cytokine L2
ENSG00000028839 TBPL1 -516808 sc-eQTL 9.18e-01 0.0113 0.109 0.322 PB L2
ENSG00000079950 STX7 922164 sc-eQTL 2.75e-01 -0.0851 0.0775 0.322 PB L2
ENSG00000112303 VNN2 671903 sc-eQTL 6.32e-01 -0.0457 0.0951 0.322 PB L2
ENSG00000112306 RPS12 620793 sc-eQTL 2.45e-01 -0.0629 0.0537 0.322 PB L2
ENSG00000118515 SGK1 -882750 sc-eQTL 9.80e-01 0.00219 0.0873 0.322 PB L2
ENSG00000146409 SLC18B1 622023 sc-eQTL 9.27e-01 -0.0093 0.101 0.322 PB L2
ENSG00000028839 TBPL1 -516808 sc-eQTL 9.20e-01 -0.00933 0.0923 0.328 Pro_T L2
ENSG00000079950 STX7 922164 sc-eQTL 9.45e-02 0.137 0.0818 0.328 Pro_T L2
ENSG00000112303 VNN2 671903 sc-eQTL 9.64e-01 -0.00396 0.0884 0.328 Pro_T L2
ENSG00000112306 RPS12 620793 sc-eQTL 6.85e-01 -0.0136 0.0334 0.328 Pro_T L2
ENSG00000118515 SGK1 -882750 sc-eQTL 6.21e-01 0.0332 0.067 0.328 Pro_T L2
ENSG00000146409 SLC18B1 622023 sc-eQTL 7.96e-01 0.0224 0.0865 0.328 Pro_T L2
ENSG00000028839 TBPL1 -516808 sc-eQTL 6.85e-01 -0.0377 0.0928 0.327 Treg L2
ENSG00000079950 STX7 922164 sc-eQTL 3.22e-01 0.0867 0.0873 0.327 Treg L2
ENSG00000112303 VNN2 671903 sc-eQTL 4.58e-01 0.0546 0.0735 0.327 Treg L2
ENSG00000112306 RPS12 620793 sc-eQTL 4.05e-01 0.0271 0.0325 0.327 Treg L2
ENSG00000118515 SGK1 -882750 sc-eQTL 8.48e-01 0.0132 0.0686 0.327 Treg L2
ENSG00000146409 SLC18B1 622023 sc-eQTL 9.83e-01 0.00201 0.092 0.327 Treg L2
ENSG00000028839 TBPL1 -516808 sc-eQTL 7.94e-01 0.0257 0.0986 0.327 cDC L2
ENSG00000079950 STX7 922164 sc-eQTL 6.95e-01 0.0304 0.0774 0.327 cDC L2
ENSG00000093134 VNN3 700597 sc-eQTL 7.87e-01 -0.0208 0.0769 0.327 cDC L2
ENSG00000112299 VNN1 721307 sc-eQTL 4.87e-01 0.0628 0.0903 0.327 cDC L2
ENSG00000112303 VNN2 671903 sc-eQTL 9.72e-01 0.00315 0.0881 0.327 cDC L2
ENSG00000112306 RPS12 620793 sc-eQTL 5.96e-01 -0.0231 0.0434 0.327 cDC L2
ENSG00000118515 SGK1 -882750 sc-eQTL 3.37e-01 0.0703 0.0731 0.327 cDC L2
ENSG00000146409 SLC18B1 622023 sc-eQTL 4.56e-01 0.0643 0.086 0.327 cDC L2
ENSG00000286438 AL591115.1 332234 sc-eQTL 7.57e-01 -0.0213 0.0688 0.327 cDC L2
ENSG00000286887 AL355881.1 -860939 sc-eQTL 1.74e-01 0.115 0.0843 0.327 cDC L2
ENSG00000028839 TBPL1 -516808 sc-eQTL 7.84e-01 0.0207 0.0755 0.327 cMono_IL1B L2
ENSG00000079950 STX7 922164 sc-eQTL 7.41e-01 0.019 0.0573 0.327 cMono_IL1B L2
ENSG00000093134 VNN3 700597 sc-eQTL 1.92e-01 -0.106 0.0806 0.327 cMono_IL1B L2
ENSG00000112299 VNN1 721307 sc-eQTL 2.28e-01 0.0983 0.0814 0.327 cMono_IL1B L2
ENSG00000112303 VNN2 671903 sc-eQTL 8.32e-01 0.0139 0.0653 0.327 cMono_IL1B L2
ENSG00000112306 RPS12 620793 sc-eQTL 3.53e-01 -0.0337 0.0362 0.327 cMono_IL1B L2
ENSG00000118515 SGK1 -882750 sc-eQTL 8.48e-01 0.0104 0.0541 0.327 cMono_IL1B L2
ENSG00000146409 SLC18B1 622023 sc-eQTL 5.30e-01 -0.044 0.0699 0.327 cMono_IL1B L2
ENSG00000286887 AL355881.1 -860939 sc-eQTL 9.25e-01 -0.00689 0.0728 0.327 cMono_IL1B L2
ENSG00000028839 TBPL1 -516808 sc-eQTL 4.82e-01 -0.0604 0.0856 0.327 cMono_S100A L2
ENSG00000079950 STX7 922164 sc-eQTL 4.12e-02 0.126 0.0613 0.327 cMono_S100A L2
ENSG00000093134 VNN3 700597 sc-eQTL 1.79e-02 -0.182 0.0763 0.327 cMono_S100A L2
ENSG00000112299 VNN1 721307 sc-eQTL 8.63e-02 0.144 0.0834 0.327 cMono_S100A L2
ENSG00000112303 VNN2 671903 sc-eQTL 6.08e-01 -0.0283 0.0549 0.327 cMono_S100A L2
ENSG00000112306 RPS12 620793 sc-eQTL 6.63e-01 -0.0173 0.0396 0.327 cMono_S100A L2
ENSG00000118515 SGK1 -882750 sc-eQTL 1.60e-01 0.0636 0.0451 0.327 cMono_S100A L2
ENSG00000146409 SLC18B1 622023 sc-eQTL 3.74e-01 -0.0652 0.0731 0.327 cMono_S100A L2
ENSG00000286887 AL355881.1 -860939 sc-eQTL 5.59e-01 -0.0419 0.0716 0.327 cMono_S100A L2
ENSG00000028839 TBPL1 -516808 sc-eQTL 6.64e-01 0.0512 0.117 0.324 gdT L2
ENSG00000079950 STX7 922164 sc-eQTL 6.20e-03 0.274 0.0984 0.324 gdT L2
ENSG00000112303 VNN2 671903 sc-eQTL 3.10e-01 -0.114 0.111 0.324 gdT L2
ENSG00000112306 RPS12 620793 sc-eQTL 9.04e-01 -0.00516 0.0426 0.324 gdT L2
ENSG00000118515 SGK1 -882750 sc-eQTL 6.13e-03 0.218 0.0783 0.324 gdT L2
ENSG00000146409 SLC18B1 622023 sc-eQTL 3.96e-01 0.0934 0.11 0.324 gdT L2
ENSG00000028839 TBPL1 -516808 sc-eQTL 7.84e-01 0.0241 0.0879 0.331 intMono L2
ENSG00000079950 STX7 922164 sc-eQTL 6.16e-01 -0.0422 0.084 0.331 intMono L2
ENSG00000093134 VNN3 700597 sc-eQTL 1.71e-02 -0.201 0.0836 0.331 intMono L2
ENSG00000112299 VNN1 721307 sc-eQTL 6.28e-02 0.156 0.0831 0.331 intMono L2
ENSG00000112303 VNN2 671903 sc-eQTL 7.56e-01 0.0265 0.0852 0.331 intMono L2
ENSG00000112306 RPS12 620793 sc-eQTL 2.56e-01 -0.0421 0.037 0.331 intMono L2
ENSG00000118515 SGK1 -882750 sc-eQTL 7.55e-01 -0.0194 0.0623 0.331 intMono L2
ENSG00000146409 SLC18B1 622023 sc-eQTL 2.31e-01 0.108 0.09 0.331 intMono L2
ENSG00000286887 AL355881.1 -860939 sc-eQTL 8.52e-01 0.0161 0.0863 0.331 intMono L2
ENSG00000028839 TBPL1 -516808 sc-eQTL 9.13e-01 0.0102 0.0934 0.328 ncMono L2
ENSG00000079950 STX7 922164 sc-eQTL 4.16e-01 -0.0514 0.0631 0.328 ncMono L2
ENSG00000093134 VNN3 700597 sc-eQTL 8.92e-01 -0.0122 0.0892 0.328 ncMono L2
ENSG00000112299 VNN1 721307 sc-eQTL 3.98e-01 0.0748 0.0884 0.328 ncMono L2
ENSG00000112303 VNN2 671903 sc-eQTL 5.11e-01 0.056 0.085 0.328 ncMono L2
ENSG00000112306 RPS12 620793 sc-eQTL 6.39e-01 -0.02 0.0427 0.328 ncMono L2
ENSG00000118515 SGK1 -882750 sc-eQTL 3.45e-03 0.175 0.0591 0.328 ncMono L2
ENSG00000146409 SLC18B1 622023 sc-eQTL 4.89e-01 -0.0522 0.0753 0.328 ncMono L2
ENSG00000286887 AL355881.1 -860939 sc-eQTL 2.88e-02 0.173 0.0787 0.328 ncMono L2
ENSG00000028839 TBPL1 -516808 sc-eQTL 3.24e-01 -0.108 0.109 0.328 pDC L2
ENSG00000079950 STX7 922164 sc-eQTL 5.54e-01 -0.0432 0.0728 0.328 pDC L2
ENSG00000093134 VNN3 700597 sc-eQTL 4.63e-01 -0.0538 0.0732 0.328 pDC L2
ENSG00000112299 VNN1 721307 sc-eQTL 2.16e-01 0.0922 0.0743 0.328 pDC L2
ENSG00000112303 VNN2 671903 sc-eQTL 3.16e-01 -0.089 0.0886 0.328 pDC L2
ENSG00000112306 RPS12 620793 sc-eQTL 8.61e-01 -0.0107 0.0612 0.328 pDC L2
ENSG00000118515 SGK1 -882750 sc-eQTL 4.87e-01 0.0433 0.0621 0.328 pDC L2
ENSG00000146409 SLC18B1 622023 sc-eQTL 1.87e-02 -0.211 0.089 0.328 pDC L2
ENSG00000286438 AL591115.1 332234 sc-eQTL 4.26e-01 0.069 0.0865 0.328 pDC L2
ENSG00000286887 AL355881.1 -860939 sc-eQTL 5.29e-01 0.0485 0.0768 0.328 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -516808 sc-eQTL 1.72e-01 0.127 0.093 0.327 B_Memory LOneK1K
ENSG00000079950 STX7 922164 sc-eQTL 8.02e-02 0.0898 0.0511 0.327 B_Memory LOneK1K
ENSG00000112303 VNN2 671903 sc-eQTL 3.33e-01 0.0787 0.0812 0.327 B_Memory LOneK1K
ENSG00000112306 RPS12 620793 sc-eQTL 6.76e-01 -0.0194 0.0463 0.327 B_Memory LOneK1K
ENSG00000118515 SGK1 -882750 sc-eQTL 4.97e-01 0.0493 0.0724 0.327 B_Memory LOneK1K
ENSG00000146409 SLC18B1 622023 sc-eQTL 8.10e-02 0.148 0.0845 0.327 B_Memory LOneK1K
ENSG00000028839 TBPL1 -516808 sc-eQTL 9.35e-01 0.00696 0.0857 0.327 B_Naive LOneK1K
ENSG00000079950 STX7 922164 sc-eQTL 6.76e-02 0.0703 0.0383 0.327 B_Naive LOneK1K
ENSG00000112303 VNN2 671903 sc-eQTL 2.87e-01 -0.0797 0.0748 0.327 B_Naive LOneK1K
ENSG00000112306 RPS12 620793 sc-eQTL 9.93e-01 -0.000424 0.0454 0.327 B_Naive LOneK1K
ENSG00000118515 SGK1 -882750 sc-eQTL 9.42e-01 -0.00511 0.0702 0.327 B_Naive LOneK1K
ENSG00000146409 SLC18B1 622023 sc-eQTL 8.61e-01 0.015 0.0855 0.327 B_Naive LOneK1K
ENSG00000028839 TBPL1 -516808 sc-eQTL 7.26e-01 -0.0241 0.0687 0.327 CD14_Mono LOneK1K
ENSG00000079950 STX7 922164 sc-eQTL 1.88e-01 0.0629 0.0476 0.327 CD14_Mono LOneK1K
ENSG00000093134 VNN3 700597 sc-eQTL 4.72e-02 -0.154 0.0771 0.327 CD14_Mono LOneK1K
ENSG00000112299 VNN1 721307 sc-eQTL 4.86e-02 0.16 0.0805 0.327 CD14_Mono LOneK1K
ENSG00000112303 VNN2 671903 sc-eQTL 8.94e-01 0.00716 0.0537 0.327 CD14_Mono LOneK1K
ENSG00000112306 RPS12 620793 sc-eQTL 3.48e-01 -0.0346 0.0367 0.327 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -882750 sc-eQTL 7.41e-01 0.0166 0.0502 0.327 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 622023 sc-eQTL 3.75e-01 -0.0581 0.0654 0.327 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -860939 sc-eQTL 5.27e-01 -0.0435 0.0686 0.327 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -516808 sc-eQTL 9.39e-01 0.00692 0.09 0.328 CD16_Mono LOneK1K
ENSG00000079950 STX7 922164 sc-eQTL 1.50e-01 -0.0853 0.0591 0.328 CD16_Mono LOneK1K
ENSG00000093134 VNN3 700597 sc-eQTL 6.37e-02 -0.161 0.0866 0.328 CD16_Mono LOneK1K
ENSG00000112299 VNN1 721307 sc-eQTL 2.44e-01 0.101 0.0863 0.328 CD16_Mono LOneK1K
ENSG00000112303 VNN2 671903 sc-eQTL 3.53e-01 0.0758 0.0815 0.328 CD16_Mono LOneK1K
ENSG00000112306 RPS12 620793 sc-eQTL 6.62e-01 -0.0151 0.0346 0.328 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -882750 sc-eQTL 1.67e-01 0.0723 0.0522 0.328 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 622023 sc-eQTL 9.87e-01 -0.00134 0.0841 0.328 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -860939 sc-eQTL 2.66e-01 0.0845 0.0758 0.328 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -516808 sc-eQTL 4.77e-01 0.0517 0.0725 0.325 NK_CD56dim LOneK1K
ENSG00000079950 STX7 922164 sc-eQTL 6.52e-01 0.0308 0.0681 0.325 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 671903 sc-eQTL 2.22e-01 -0.105 0.086 0.325 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 620793 sc-eQTL 1.57e-01 -0.0498 0.0351 0.325 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -882750 sc-eQTL 6.96e-01 -0.0284 0.0727 0.325 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079950 STX7 922164 eQTL 0.00231 0.0508 0.0166 0.0 0.0 0.315
ENSG00000112299 VNN1 721307 pQTL 0.000806 0.124 0.0369 0.0 0.0 0.328
ENSG00000146409 SLC18B1 622023 eQTL 0.00694 0.0633 0.0234 0.0 0.0 0.315

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina