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Genes within 1Mb (chr6:133432687:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -519483 sc-eQTL 7.09e-01 -0.0322 0.0861 0.348 B L1
ENSG00000079950 STX7 919489 sc-eQTL 8.72e-01 0.00553 0.0343 0.348 B L1
ENSG00000112303 VNN2 669228 sc-eQTL 3.17e-01 0.0646 0.0643 0.348 B L1
ENSG00000112306 RPS12 618118 sc-eQTL 1.91e-01 0.051 0.0388 0.348 B L1
ENSG00000118515 SGK1 -885425 sc-eQTL 2.60e-01 -0.0677 0.06 0.348 B L1
ENSG00000146409 SLC18B1 619348 sc-eQTL 8.64e-01 -0.014 0.0821 0.348 B L1
ENSG00000028839 TBPL1 -519483 sc-eQTL 7.52e-01 0.0205 0.0649 0.348 CD4T L1
ENSG00000079950 STX7 919489 sc-eQTL 4.11e-01 -0.0555 0.0674 0.348 CD4T L1
ENSG00000112303 VNN2 669228 sc-eQTL 7.51e-01 -0.0186 0.0584 0.348 CD4T L1
ENSG00000112306 RPS12 618118 sc-eQTL 8.09e-01 0.0096 0.0397 0.348 CD4T L1
ENSG00000118515 SGK1 -885425 sc-eQTL 3.08e-01 -0.0544 0.0533 0.348 CD4T L1
ENSG00000146409 SLC18B1 619348 sc-eQTL 2.94e-01 -0.0842 0.0801 0.348 CD4T L1
ENSG00000028839 TBPL1 -519483 sc-eQTL 7.08e-01 0.024 0.0639 0.348 CD8T L1
ENSG00000079950 STX7 919489 sc-eQTL 7.73e-02 0.118 0.0662 0.348 CD8T L1
ENSG00000112303 VNN2 669228 sc-eQTL 7.79e-01 0.0219 0.0778 0.348 CD8T L1
ENSG00000112306 RPS12 618118 sc-eQTL 1.12e-01 0.0422 0.0265 0.348 CD8T L1
ENSG00000118515 SGK1 -885425 sc-eQTL 2.84e-01 -0.0439 0.0409 0.348 CD8T L1
ENSG00000146409 SLC18B1 619348 sc-eQTL 8.52e-01 -0.015 0.0804 0.348 CD8T L1
ENSG00000028839 TBPL1 -519483 sc-eQTL 5.66e-01 -0.0539 0.0938 0.347 DC L1
ENSG00000079950 STX7 919489 sc-eQTL 9.38e-01 0.00451 0.0583 0.347 DC L1
ENSG00000093134 VNN3 697922 sc-eQTL 7.86e-01 0.0197 0.0723 0.347 DC L1
ENSG00000112299 VNN1 718632 sc-eQTL 7.48e-01 0.0251 0.0781 0.347 DC L1
ENSG00000112303 VNN2 669228 sc-eQTL 5.63e-01 0.0484 0.0835 0.347 DC L1
ENSG00000112306 RPS12 618118 sc-eQTL 3.81e-01 0.0411 0.0467 0.347 DC L1
ENSG00000118515 SGK1 -885425 sc-eQTL 5.03e-01 -0.0364 0.0543 0.347 DC L1
ENSG00000146409 SLC18B1 619348 sc-eQTL 6.23e-01 -0.0365 0.0741 0.347 DC L1
ENSG00000286438 AL591115.1 329559 sc-eQTL 9.75e-01 0.00213 0.0675 0.347 DC L1
ENSG00000286887 AL355881.1 -863614 sc-eQTL 4.27e-01 -0.0668 0.084 0.347 DC L1
ENSG00000028839 TBPL1 -519483 sc-eQTL 7.83e-01 0.0186 0.0674 0.348 Mono L1
ENSG00000079950 STX7 919489 sc-eQTL 7.61e-01 0.0137 0.0451 0.348 Mono L1
ENSG00000093134 VNN3 697922 sc-eQTL 1.45e-02 0.188 0.0764 0.348 Mono L1
ENSG00000112299 VNN1 718632 sc-eQTL 7.61e-02 -0.147 0.0827 0.348 Mono L1
ENSG00000112303 VNN2 669228 sc-eQTL 5.76e-01 0.0329 0.0588 0.348 Mono L1
ENSG00000112306 RPS12 618118 sc-eQTL 9.73e-01 -0.00121 0.0352 0.348 Mono L1
ENSG00000118515 SGK1 -885425 sc-eQTL 1.19e-01 -0.0774 0.0495 0.348 Mono L1
ENSG00000146409 SLC18B1 619348 sc-eQTL 1.01e-01 0.114 0.0693 0.348 Mono L1
ENSG00000286887 AL355881.1 -863614 sc-eQTL 9.87e-02 -0.113 0.0681 0.348 Mono L1
ENSG00000028839 TBPL1 -519483 sc-eQTL 7.76e-01 -0.0212 0.0746 0.35 NK L1
ENSG00000079950 STX7 919489 sc-eQTL 2.46e-01 0.08 0.0688 0.35 NK L1
ENSG00000112303 VNN2 669228 sc-eQTL 6.11e-01 0.0437 0.0859 0.35 NK L1
ENSG00000112306 RPS12 618118 sc-eQTL 5.69e-01 0.0203 0.0355 0.35 NK L1
ENSG00000118515 SGK1 -885425 sc-eQTL 3.33e-01 -0.0636 0.0656 0.35 NK L1
ENSG00000028839 TBPL1 -519483 sc-eQTL 6.27e-01 0.0418 0.0859 0.348 Other_T L1
ENSG00000079950 STX7 919489 sc-eQTL 7.44e-01 -0.0221 0.0676 0.348 Other_T L1
ENSG00000112303 VNN2 669228 sc-eQTL 4.02e-01 -0.0686 0.0816 0.348 Other_T L1
ENSG00000112306 RPS12 618118 sc-eQTL 4.58e-01 -0.024 0.0324 0.348 Other_T L1
ENSG00000118515 SGK1 -885425 sc-eQTL 9.05e-02 -0.101 0.0592 0.348 Other_T L1
ENSG00000146409 SLC18B1 619348 sc-eQTL 9.88e-01 -0.00136 0.0888 0.348 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -519483 sc-eQTL 7.79e-01 0.0276 0.0982 0.357 B_Activated L2
ENSG00000079950 STX7 919489 sc-eQTL 5.78e-01 0.0468 0.0841 0.357 B_Activated L2
ENSG00000112303 VNN2 669228 sc-eQTL 5.41e-01 -0.0548 0.0894 0.357 B_Activated L2
ENSG00000112306 RPS12 618118 sc-eQTL 3.20e-01 0.0477 0.0478 0.357 B_Activated L2
ENSG00000118515 SGK1 -885425 sc-eQTL 2.34e-02 -0.193 0.0843 0.357 B_Activated L2
ENSG00000146409 SLC18B1 619348 sc-eQTL 1.15e-01 0.132 0.0834 0.357 B_Activated L2
ENSG00000028839 TBPL1 -519483 sc-eQTL 5.34e-01 -0.0579 0.0931 0.348 B_Intermediate L2
ENSG00000079950 STX7 919489 sc-eQTL 5.52e-01 0.0319 0.0535 0.348 B_Intermediate L2
ENSG00000112303 VNN2 669228 sc-eQTL 4.63e-02 0.16 0.0799 0.348 B_Intermediate L2
ENSG00000112306 RPS12 618118 sc-eQTL 2.10e-01 0.0618 0.0492 0.348 B_Intermediate L2
ENSG00000118515 SGK1 -885425 sc-eQTL 4.05e-02 -0.174 0.0845 0.348 B_Intermediate L2
ENSG00000146409 SLC18B1 619348 sc-eQTL 5.09e-01 -0.0588 0.0889 0.348 B_Intermediate L2
ENSG00000028839 TBPL1 -519483 sc-eQTL 5.15e-01 0.0592 0.0907 0.349 B_Memory L2
ENSG00000079950 STX7 919489 sc-eQTL 5.55e-01 0.0388 0.0657 0.349 B_Memory L2
ENSG00000112303 VNN2 669228 sc-eQTL 9.95e-01 -0.000514 0.0859 0.349 B_Memory L2
ENSG00000112306 RPS12 618118 sc-eQTL 9.53e-02 0.0689 0.0411 0.349 B_Memory L2
ENSG00000118515 SGK1 -885425 sc-eQTL 1.33e-01 -0.114 0.0755 0.349 B_Memory L2
ENSG00000146409 SLC18B1 619348 sc-eQTL 1.43e-01 -0.126 0.086 0.349 B_Memory L2
ENSG00000028839 TBPL1 -519483 sc-eQTL 9.06e-01 0.0101 0.0854 0.348 B_Naive1 L2
ENSG00000079950 STX7 919489 sc-eQTL 7.06e-01 -0.0155 0.041 0.348 B_Naive1 L2
ENSG00000112303 VNN2 669228 sc-eQTL 6.83e-01 0.0326 0.0797 0.348 B_Naive1 L2
ENSG00000112306 RPS12 618118 sc-eQTL 8.35e-01 0.00946 0.0454 0.348 B_Naive1 L2
ENSG00000118515 SGK1 -885425 sc-eQTL 9.39e-01 -0.00541 0.071 0.348 B_Naive1 L2
ENSG00000146409 SLC18B1 619348 sc-eQTL 7.37e-01 0.0294 0.0876 0.348 B_Naive1 L2
ENSG00000028839 TBPL1 -519483 sc-eQTL 7.96e-01 0.0237 0.0918 0.35 B_Naive2 L2
ENSG00000079950 STX7 919489 sc-eQTL 8.42e-01 -0.00974 0.0488 0.35 B_Naive2 L2
ENSG00000112303 VNN2 669228 sc-eQTL 3.08e-01 0.0913 0.0894 0.35 B_Naive2 L2
ENSG00000112306 RPS12 618118 sc-eQTL 2.66e-01 0.0527 0.0473 0.35 B_Naive2 L2
ENSG00000118515 SGK1 -885425 sc-eQTL 3.33e-01 -0.0812 0.0836 0.35 B_Naive2 L2
ENSG00000146409 SLC18B1 619348 sc-eQTL 4.69e-01 0.0655 0.0904 0.35 B_Naive2 L2
ENSG00000028839 TBPL1 -519483 sc-eQTL 3.71e-02 -0.186 0.0887 0.35 CD4_CTL L2
ENSG00000079950 STX7 919489 sc-eQTL 8.09e-01 -0.0215 0.089 0.35 CD4_CTL L2
ENSG00000112303 VNN2 669228 sc-eQTL 5.59e-01 0.0525 0.0898 0.35 CD4_CTL L2
ENSG00000112306 RPS12 618118 sc-eQTL 7.11e-01 0.0154 0.0415 0.35 CD4_CTL L2
ENSG00000118515 SGK1 -885425 sc-eQTL 2.14e-01 -0.0893 0.0717 0.35 CD4_CTL L2
ENSG00000146409 SLC18B1 619348 sc-eQTL 6.34e-01 -0.0399 0.0837 0.35 CD4_CTL L2
ENSG00000028839 TBPL1 -519483 sc-eQTL 3.60e-01 0.0678 0.0739 0.348 CD4_Naive L2
ENSG00000079950 STX7 919489 sc-eQTL 6.67e-02 -0.133 0.072 0.348 CD4_Naive L2
ENSG00000112303 VNN2 669228 sc-eQTL 4.71e-01 -0.0485 0.0672 0.348 CD4_Naive L2
ENSG00000112306 RPS12 618118 sc-eQTL 9.45e-01 -0.00304 0.0436 0.348 CD4_Naive L2
ENSG00000118515 SGK1 -885425 sc-eQTL 6.76e-02 -0.0974 0.053 0.348 CD4_Naive L2
ENSG00000146409 SLC18B1 619348 sc-eQTL 4.43e-01 -0.0644 0.0839 0.348 CD4_Naive L2
ENSG00000028839 TBPL1 -519483 sc-eQTL 2.57e-01 0.091 0.0801 0.348 CD4_TCM L2
ENSG00000079950 STX7 919489 sc-eQTL 5.66e-01 0.0465 0.0809 0.348 CD4_TCM L2
ENSG00000112303 VNN2 669228 sc-eQTL 6.45e-01 0.0368 0.0797 0.348 CD4_TCM L2
ENSG00000112306 RPS12 618118 sc-eQTL 2.79e-01 0.0448 0.0412 0.348 CD4_TCM L2
ENSG00000118515 SGK1 -885425 sc-eQTL 8.03e-01 -0.0144 0.0579 0.348 CD4_TCM L2
ENSG00000146409 SLC18B1 619348 sc-eQTL 3.63e-01 -0.0871 0.0956 0.348 CD4_TCM L2
ENSG00000028839 TBPL1 -519483 sc-eQTL 9.45e-01 0.00629 0.0918 0.348 CD4_TEM L2
ENSG00000079950 STX7 919489 sc-eQTL 8.99e-01 0.0117 0.0919 0.348 CD4_TEM L2
ENSG00000112303 VNN2 669228 sc-eQTL 6.03e-01 -0.0459 0.0882 0.348 CD4_TEM L2
ENSG00000112306 RPS12 618118 sc-eQTL 8.09e-01 -0.00875 0.0362 0.348 CD4_TEM L2
ENSG00000118515 SGK1 -885425 sc-eQTL 1.78e-01 -0.0836 0.0619 0.348 CD4_TEM L2
ENSG00000146409 SLC18B1 619348 sc-eQTL 5.63e-01 -0.052 0.0898 0.348 CD4_TEM L2
ENSG00000028839 TBPL1 -519483 sc-eQTL 2.32e-01 0.0947 0.0791 0.348 CD8_CTL L2
ENSG00000079950 STX7 919489 sc-eQTL 2.32e-02 0.168 0.0733 0.348 CD8_CTL L2
ENSG00000112303 VNN2 669228 sc-eQTL 6.04e-01 0.0437 0.0842 0.348 CD8_CTL L2
ENSG00000112306 RPS12 618118 sc-eQTL 9.94e-01 0.000361 0.0451 0.348 CD8_CTL L2
ENSG00000118515 SGK1 -885425 sc-eQTL 1.03e-01 -0.124 0.0757 0.348 CD8_CTL L2
ENSG00000146409 SLC18B1 619348 sc-eQTL 9.13e-01 -0.00961 0.0874 0.348 CD8_CTL L2
ENSG00000028839 TBPL1 -519483 sc-eQTL 2.32e-01 -0.101 0.0839 0.348 CD8_Naive L2
ENSG00000079950 STX7 919489 sc-eQTL 3.14e-01 0.0903 0.0895 0.348 CD8_Naive L2
ENSG00000112303 VNN2 669228 sc-eQTL 8.06e-01 -0.019 0.0774 0.348 CD8_Naive L2
ENSG00000112306 RPS12 618118 sc-eQTL 7.15e-01 0.0162 0.0443 0.348 CD8_Naive L2
ENSG00000118515 SGK1 -885425 sc-eQTL 2.19e-01 -0.0683 0.0554 0.348 CD8_Naive L2
ENSG00000146409 SLC18B1 619348 sc-eQTL 5.88e-01 0.0481 0.0888 0.348 CD8_Naive L2
ENSG00000028839 TBPL1 -519483 sc-eQTL 8.99e-01 -0.0122 0.0957 0.352 CD8_TCM L2
ENSG00000079950 STX7 919489 sc-eQTL 3.74e-01 -0.0788 0.0884 0.352 CD8_TCM L2
ENSG00000112303 VNN2 669228 sc-eQTL 4.71e-01 0.0635 0.0878 0.352 CD8_TCM L2
ENSG00000112306 RPS12 618118 sc-eQTL 6.45e-01 0.0198 0.0428 0.352 CD8_TCM L2
ENSG00000118515 SGK1 -885425 sc-eQTL 2.30e-03 -0.214 0.0693 0.352 CD8_TCM L2
ENSG00000146409 SLC18B1 619348 sc-eQTL 5.56e-01 0.0554 0.0938 0.352 CD8_TCM L2
ENSG00000028839 TBPL1 -519483 sc-eQTL 5.54e-01 -0.0511 0.0863 0.338 CD8_TEM L2
ENSG00000079950 STX7 919489 sc-eQTL 3.70e-01 -0.0846 0.0941 0.338 CD8_TEM L2
ENSG00000112303 VNN2 669228 sc-eQTL 2.15e-01 -0.116 0.0934 0.338 CD8_TEM L2
ENSG00000112306 RPS12 618118 sc-eQTL 1.09e-01 -0.0807 0.0501 0.338 CD8_TEM L2
ENSG00000118515 SGK1 -885425 sc-eQTL 7.75e-01 0.0237 0.0827 0.338 CD8_TEM L2
ENSG00000146409 SLC18B1 619348 sc-eQTL 1.75e-01 -0.129 0.095 0.338 CD8_TEM L2
ENSG00000028839 TBPL1 -519483 sc-eQTL 3.63e-01 -0.0822 0.0902 0.348 MAIT L2
ENSG00000079950 STX7 919489 sc-eQTL 9.52e-01 -0.00515 0.0859 0.348 MAIT L2
ENSG00000112303 VNN2 669228 sc-eQTL 4.69e-01 0.0632 0.0873 0.348 MAIT L2
ENSG00000112306 RPS12 618118 sc-eQTL 5.92e-01 0.023 0.0429 0.348 MAIT L2
ENSG00000118515 SGK1 -885425 sc-eQTL 5.09e-02 -0.118 0.0599 0.348 MAIT L2
ENSG00000146409 SLC18B1 619348 sc-eQTL 7.94e-01 0.0235 0.0901 0.348 MAIT L2
ENSG00000028839 TBPL1 -519483 sc-eQTL 3.69e-01 0.0863 0.0958 0.349 NK_CD56bright L2
ENSG00000079950 STX7 919489 sc-eQTL 7.41e-01 -0.0294 0.089 0.349 NK_CD56bright L2
ENSG00000112303 VNN2 669228 sc-eQTL 2.76e-01 -0.0984 0.0901 0.349 NK_CD56bright L2
ENSG00000112306 RPS12 618118 sc-eQTL 9.07e-01 0.00589 0.0504 0.349 NK_CD56bright L2
ENSG00000118515 SGK1 -885425 sc-eQTL 5.73e-01 -0.0425 0.0752 0.349 NK_CD56bright L2
ENSG00000028839 TBPL1 -519483 sc-eQTL 8.25e-01 -0.0177 0.0799 0.351 NK_CD56dim L2
ENSG00000079950 STX7 919489 sc-eQTL 1.71e-01 0.1 0.0728 0.351 NK_CD56dim L2
ENSG00000112303 VNN2 669228 sc-eQTL 3.11e-01 0.0928 0.0912 0.351 NK_CD56dim L2
ENSG00000112306 RPS12 618118 sc-eQTL 4.88e-01 0.0252 0.0363 0.351 NK_CD56dim L2
ENSG00000118515 SGK1 -885425 sc-eQTL 2.70e-01 -0.0887 0.0802 0.351 NK_CD56dim L2
ENSG00000028839 TBPL1 -519483 sc-eQTL 6.73e-01 -0.0417 0.0987 0.347 NK_HLA L2
ENSG00000079950 STX7 919489 sc-eQTL 8.97e-01 0.0117 0.0899 0.347 NK_HLA L2
ENSG00000112303 VNN2 669228 sc-eQTL 9.12e-01 -0.0101 0.091 0.347 NK_HLA L2
ENSG00000112306 RPS12 618118 sc-eQTL 7.38e-01 0.0142 0.0424 0.347 NK_HLA L2
ENSG00000118515 SGK1 -885425 sc-eQTL 1.86e-01 -0.111 0.0834 0.347 NK_HLA L2
ENSG00000028839 TBPL1 -519483 sc-eQTL 7.22e-01 -0.0289 0.0813 0.351 NK_cytokine L2
ENSG00000079950 STX7 919489 sc-eQTL 6.16e-01 -0.0395 0.0787 0.351 NK_cytokine L2
ENSG00000112303 VNN2 669228 sc-eQTL 8.73e-01 0.0142 0.0885 0.351 NK_cytokine L2
ENSG00000112306 RPS12 618118 sc-eQTL 7.98e-01 0.0123 0.048 0.351 NK_cytokine L2
ENSG00000118515 SGK1 -885425 sc-eQTL 3.14e-01 -0.0805 0.0798 0.351 NK_cytokine L2
ENSG00000028839 TBPL1 -519483 sc-eQTL 4.32e-01 -0.089 0.113 0.352 PB L2
ENSG00000079950 STX7 919489 sc-eQTL 4.94e-01 0.0552 0.0805 0.352 PB L2
ENSG00000112303 VNN2 669228 sc-eQTL 1.48e-01 0.142 0.0976 0.352 PB L2
ENSG00000112306 RPS12 618118 sc-eQTL 6.56e-01 0.025 0.0559 0.352 PB L2
ENSG00000118515 SGK1 -885425 sc-eQTL 1.98e-01 -0.116 0.0897 0.352 PB L2
ENSG00000146409 SLC18B1 619348 sc-eQTL 7.91e-01 0.0279 0.105 0.352 PB L2
ENSG00000028839 TBPL1 -519483 sc-eQTL 9.26e-01 0.00834 0.0891 0.346 Pro_T L2
ENSG00000079950 STX7 919489 sc-eQTL 4.65e-01 -0.0581 0.0795 0.346 Pro_T L2
ENSG00000112303 VNN2 669228 sc-eQTL 9.48e-01 0.00558 0.0853 0.346 Pro_T L2
ENSG00000112306 RPS12 618118 sc-eQTL 1.44e-01 -0.0471 0.0321 0.346 Pro_T L2
ENSG00000118515 SGK1 -885425 sc-eQTL 7.66e-01 -0.0193 0.0647 0.346 Pro_T L2
ENSG00000146409 SLC18B1 619348 sc-eQTL 8.44e-01 0.0164 0.0835 0.346 Pro_T L2
ENSG00000028839 TBPL1 -519483 sc-eQTL 9.86e-01 0.0017 0.0941 0.348 Treg L2
ENSG00000079950 STX7 919489 sc-eQTL 6.59e-02 -0.163 0.088 0.348 Treg L2
ENSG00000112303 VNN2 669228 sc-eQTL 4.47e-01 0.0567 0.0745 0.348 Treg L2
ENSG00000112306 RPS12 618118 sc-eQTL 2.35e-01 -0.0392 0.0329 0.348 Treg L2
ENSG00000118515 SGK1 -885425 sc-eQTL 5.85e-01 0.038 0.0695 0.348 Treg L2
ENSG00000146409 SLC18B1 619348 sc-eQTL 1.34e-01 -0.14 0.0928 0.348 Treg L2
ENSG00000028839 TBPL1 -519483 sc-eQTL 3.72e-01 -0.0879 0.0982 0.344 cDC L2
ENSG00000079950 STX7 919489 sc-eQTL 9.13e-01 -0.00843 0.0773 0.344 cDC L2
ENSG00000093134 VNN3 697922 sc-eQTL 3.33e-01 0.0743 0.0765 0.344 cDC L2
ENSG00000112299 VNN1 718632 sc-eQTL 7.62e-01 0.0274 0.0902 0.344 cDC L2
ENSG00000112303 VNN2 669228 sc-eQTL 5.53e-01 0.0522 0.0878 0.344 cDC L2
ENSG00000112306 RPS12 618118 sc-eQTL 3.22e-01 0.043 0.0433 0.344 cDC L2
ENSG00000118515 SGK1 -885425 sc-eQTL 1.76e-02 -0.172 0.072 0.344 cDC L2
ENSG00000146409 SLC18B1 619348 sc-eQTL 3.37e-01 -0.0826 0.0857 0.344 cDC L2
ENSG00000286438 AL591115.1 329559 sc-eQTL 1.83e-01 0.0915 0.0684 0.344 cDC L2
ENSG00000286887 AL355881.1 -863614 sc-eQTL 2.10e-01 -0.106 0.0842 0.344 cDC L2
ENSG00000028839 TBPL1 -519483 sc-eQTL 7.57e-01 0.0237 0.0766 0.348 cMono_IL1B L2
ENSG00000079950 STX7 919489 sc-eQTL 4.09e-01 0.0481 0.0581 0.348 cMono_IL1B L2
ENSG00000093134 VNN3 697922 sc-eQTL 1.05e-01 0.133 0.0817 0.348 cMono_IL1B L2
ENSG00000112299 VNN1 718632 sc-eQTL 1.31e-01 -0.125 0.0825 0.348 cMono_IL1B L2
ENSG00000112303 VNN2 669228 sc-eQTL 3.31e-01 0.0645 0.0662 0.348 cMono_IL1B L2
ENSG00000112306 RPS12 618118 sc-eQTL 9.04e-01 -0.00447 0.0368 0.348 cMono_IL1B L2
ENSG00000118515 SGK1 -885425 sc-eQTL 2.98e-01 -0.0572 0.0548 0.348 cMono_IL1B L2
ENSG00000146409 SLC18B1 619348 sc-eQTL 1.61e-01 0.0996 0.0707 0.348 cMono_IL1B L2
ENSG00000286887 AL355881.1 -863614 sc-eQTL 3.89e-01 -0.0637 0.0739 0.348 cMono_IL1B L2
ENSG00000028839 TBPL1 -519483 sc-eQTL 8.54e-01 0.016 0.0866 0.348 cMono_S100A L2
ENSG00000079950 STX7 919489 sc-eQTL 4.61e-01 -0.0462 0.0625 0.348 cMono_S100A L2
ENSG00000093134 VNN3 697922 sc-eQTL 4.86e-03 0.218 0.0767 0.348 cMono_S100A L2
ENSG00000112299 VNN1 718632 sc-eQTL 2.82e-01 -0.0912 0.0846 0.348 cMono_S100A L2
ENSG00000112303 VNN2 669228 sc-eQTL 3.12e-01 0.0562 0.0554 0.348 cMono_S100A L2
ENSG00000112306 RPS12 618118 sc-eQTL 8.06e-01 -0.00982 0.04 0.348 cMono_S100A L2
ENSG00000118515 SGK1 -885425 sc-eQTL 2.07e-02 -0.105 0.0452 0.348 cMono_S100A L2
ENSG00000146409 SLC18B1 619348 sc-eQTL 1.01e-01 0.121 0.0736 0.348 cMono_S100A L2
ENSG00000286887 AL355881.1 -863614 sc-eQTL 1.11e-01 -0.115 0.072 0.348 cMono_S100A L2
ENSG00000028839 TBPL1 -519483 sc-eQTL 8.79e-01 0.0176 0.116 0.333 gdT L2
ENSG00000079950 STX7 919489 sc-eQTL 5.53e-01 -0.0592 0.0994 0.333 gdT L2
ENSG00000112303 VNN2 669228 sc-eQTL 4.54e-01 -0.0825 0.11 0.333 gdT L2
ENSG00000112306 RPS12 618118 sc-eQTL 6.43e-01 -0.0195 0.0419 0.333 gdT L2
ENSG00000118515 SGK1 -885425 sc-eQTL 4.76e-03 -0.221 0.077 0.333 gdT L2
ENSG00000146409 SLC18B1 619348 sc-eQTL 5.01e-01 -0.073 0.108 0.333 gdT L2
ENSG00000028839 TBPL1 -519483 sc-eQTL 7.91e-01 0.0236 0.0889 0.344 intMono L2
ENSG00000079950 STX7 919489 sc-eQTL 5.83e-01 0.0466 0.0849 0.344 intMono L2
ENSG00000093134 VNN3 697922 sc-eQTL 7.59e-03 0.227 0.0843 0.344 intMono L2
ENSG00000112299 VNN1 718632 sc-eQTL 4.21e-01 -0.0682 0.0847 0.344 intMono L2
ENSG00000112303 VNN2 669228 sc-eQTL 6.20e-01 -0.0427 0.0861 0.344 intMono L2
ENSG00000112306 RPS12 618118 sc-eQTL 4.97e-01 -0.0255 0.0375 0.344 intMono L2
ENSG00000118515 SGK1 -885425 sc-eQTL 4.81e-01 -0.0444 0.0629 0.344 intMono L2
ENSG00000146409 SLC18B1 619348 sc-eQTL 3.11e-03 -0.267 0.0893 0.344 intMono L2
ENSG00000286887 AL355881.1 -863614 sc-eQTL 3.48e-01 -0.0819 0.0871 0.344 intMono L2
ENSG00000028839 TBPL1 -519483 sc-eQTL 5.21e-01 -0.0597 0.0929 0.344 ncMono L2
ENSG00000079950 STX7 919489 sc-eQTL 8.69e-01 -0.0104 0.0629 0.344 ncMono L2
ENSG00000093134 VNN3 697922 sc-eQTL 4.74e-01 0.0636 0.0886 0.344 ncMono L2
ENSG00000112299 VNN1 718632 sc-eQTL 2.39e-01 -0.104 0.0878 0.344 ncMono L2
ENSG00000112303 VNN2 669228 sc-eQTL 2.77e-01 -0.0921 0.0844 0.344 ncMono L2
ENSG00000112306 RPS12 618118 sc-eQTL 5.58e-01 0.0249 0.0424 0.344 ncMono L2
ENSG00000118515 SGK1 -885425 sc-eQTL 6.42e-03 -0.162 0.059 0.344 ncMono L2
ENSG00000146409 SLC18B1 619348 sc-eQTL 1.73e-01 0.102 0.0747 0.344 ncMono L2
ENSG00000286887 AL355881.1 -863614 sc-eQTL 6.22e-02 -0.147 0.0786 0.344 ncMono L2
ENSG00000028839 TBPL1 -519483 sc-eQTL 5.69e-01 0.0614 0.108 0.342 pDC L2
ENSG00000079950 STX7 919489 sc-eQTL 8.47e-02 0.123 0.071 0.342 pDC L2
ENSG00000093134 VNN3 697922 sc-eQTL 8.02e-01 0.0181 0.0721 0.342 pDC L2
ENSG00000112299 VNN1 718632 sc-eQTL 5.39e-01 0.0451 0.0733 0.342 pDC L2
ENSG00000112303 VNN2 669228 sc-eQTL 7.75e-02 0.154 0.0865 0.342 pDC L2
ENSG00000112306 RPS12 618118 sc-eQTL 4.02e-01 -0.0504 0.0601 0.342 pDC L2
ENSG00000118515 SGK1 -885425 sc-eQTL 8.55e-01 -0.0112 0.0612 0.342 pDC L2
ENSG00000146409 SLC18B1 619348 sc-eQTL 5.13e-01 -0.0583 0.089 0.342 pDC L2
ENSG00000286438 AL591115.1 329559 sc-eQTL 9.02e-01 0.0105 0.0853 0.342 pDC L2
ENSG00000286887 AL355881.1 -863614 sc-eQTL 9.28e-01 -0.00682 0.0756 0.342 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -519483 sc-eQTL 8.07e-01 -0.0223 0.0909 0.348 B_Memory LOneK1K
ENSG00000079950 STX7 919489 sc-eQTL 2.07e-01 0.0631 0.0499 0.348 B_Memory LOneK1K
ENSG00000112303 VNN2 669228 sc-eQTL 6.04e-01 0.0411 0.0791 0.348 B_Memory LOneK1K
ENSG00000112306 RPS12 618118 sc-eQTL 4.63e-01 0.0331 0.0451 0.348 B_Memory LOneK1K
ENSG00000118515 SGK1 -885425 sc-eQTL 1.25e-02 -0.175 0.0695 0.348 B_Memory LOneK1K
ENSG00000146409 SLC18B1 619348 sc-eQTL 2.85e-01 -0.0886 0.0826 0.348 B_Memory LOneK1K
ENSG00000028839 TBPL1 -519483 sc-eQTL 5.66e-01 -0.049 0.0852 0.348 B_Naive LOneK1K
ENSG00000079950 STX7 919489 sc-eQTL 5.13e-01 -0.0252 0.0384 0.348 B_Naive LOneK1K
ENSG00000112303 VNN2 669228 sc-eQTL 3.34e-01 0.0721 0.0744 0.348 B_Naive LOneK1K
ENSG00000112306 RPS12 618118 sc-eQTL 5.64e-01 0.0261 0.0451 0.348 B_Naive LOneK1K
ENSG00000118515 SGK1 -885425 sc-eQTL 4.22e-01 -0.0561 0.0698 0.348 B_Naive LOneK1K
ENSG00000146409 SLC18B1 619348 sc-eQTL 9.15e-01 0.00915 0.0851 0.348 B_Naive LOneK1K
ENSG00000028839 TBPL1 -519483 sc-eQTL 7.88e-01 0.0188 0.07 0.348 CD14_Mono LOneK1K
ENSG00000079950 STX7 919489 sc-eQTL 7.91e-01 0.0129 0.0487 0.348 CD14_Mono LOneK1K
ENSG00000093134 VNN3 697922 sc-eQTL 3.70e-02 0.165 0.0785 0.348 CD14_Mono LOneK1K
ENSG00000112299 VNN1 718632 sc-eQTL 6.93e-02 -0.15 0.0821 0.348 CD14_Mono LOneK1K
ENSG00000112303 VNN2 669228 sc-eQTL 6.16e-01 0.0275 0.0547 0.348 CD14_Mono LOneK1K
ENSG00000112306 RPS12 618118 sc-eQTL 8.25e-01 -0.00832 0.0375 0.348 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -885425 sc-eQTL 1.47e-01 -0.074 0.0509 0.348 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 619348 sc-eQTL 8.04e-02 0.116 0.0663 0.348 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -863614 sc-eQTL 2.76e-01 -0.0762 0.0698 0.348 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -519483 sc-eQTL 7.35e-01 0.0308 0.0909 0.349 CD16_Mono LOneK1K
ENSG00000079950 STX7 919489 sc-eQTL 6.14e-01 0.0303 0.0599 0.349 CD16_Mono LOneK1K
ENSG00000093134 VNN3 697922 sc-eQTL 7.12e-03 0.236 0.0867 0.349 CD16_Mono LOneK1K
ENSG00000112299 VNN1 718632 sc-eQTL 4.31e-01 -0.0688 0.0873 0.349 CD16_Mono LOneK1K
ENSG00000112303 VNN2 669228 sc-eQTL 3.76e-01 -0.073 0.0823 0.349 CD16_Mono LOneK1K
ENSG00000112306 RPS12 618118 sc-eQTL 7.27e-01 0.0122 0.035 0.349 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -885425 sc-eQTL 7.41e-02 -0.0943 0.0525 0.349 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 619348 sc-eQTL 1.34e-01 -0.127 0.0845 0.349 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -863614 sc-eQTL 2.33e-02 -0.173 0.0758 0.349 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -519483 sc-eQTL 5.65e-01 -0.0427 0.074 0.351 NK_CD56dim LOneK1K
ENSG00000079950 STX7 919489 sc-eQTL 2.08e-01 0.0877 0.0693 0.351 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 669228 sc-eQTL 2.74e-01 0.0963 0.0879 0.351 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 618118 sc-eQTL 5.04e-01 0.024 0.0359 0.351 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -885425 sc-eQTL 1.94e-01 -0.0965 0.074 0.351 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079950 STX7 919489 eQTL 0.0114 -0.0408 0.0161 0.0 0.0 0.347
ENSG00000146409 SLC18B1 619348 eQTL 0.0133 -0.0561 0.0226 0.0 0.0 0.347

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina