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Genes within 1Mb (chr6:133430011:G:GC):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -522159 sc-eQTL 9.30e-01 -0.00716 0.0815 0.427 B L1
ENSG00000079950 STX7 916813 sc-eQTL 9.69e-01 0.00128 0.0325 0.427 B L1
ENSG00000112303 VNN2 666552 sc-eQTL 3.16e-01 0.0611 0.0609 0.427 B L1
ENSG00000112306 RPS12 615442 sc-eQTL 8.67e-01 0.00617 0.0369 0.427 B L1
ENSG00000118515 SGK1 -888101 sc-eQTL 1.19e-01 -0.0884 0.0566 0.427 B L1
ENSG00000146409 SLC18B1 616672 sc-eQTL 9.55e-01 0.00443 0.0776 0.427 B L1
ENSG00000028839 TBPL1 -522159 sc-eQTL 3.50e-01 -0.0568 0.0606 0.427 CD4T L1
ENSG00000079950 STX7 916813 sc-eQTL 1.16e-01 -0.0991 0.0628 0.427 CD4T L1
ENSG00000112303 VNN2 666552 sc-eQTL 9.32e-01 0.00468 0.0547 0.427 CD4T L1
ENSG00000112306 RPS12 615442 sc-eQTL 9.54e-01 -0.00213 0.0372 0.427 CD4T L1
ENSG00000118515 SGK1 -888101 sc-eQTL 2.31e-01 -0.0599 0.0498 0.427 CD4T L1
ENSG00000146409 SLC18B1 616672 sc-eQTL 2.20e-01 -0.0923 0.075 0.427 CD4T L1
ENSG00000028839 TBPL1 -522159 sc-eQTL 6.78e-01 -0.025 0.0602 0.427 CD8T L1
ENSG00000079950 STX7 916813 sc-eQTL 5.95e-01 0.0334 0.0628 0.427 CD8T L1
ENSG00000112303 VNN2 666552 sc-eQTL 3.21e-01 0.0728 0.0732 0.427 CD8T L1
ENSG00000112306 RPS12 615442 sc-eQTL 2.91e-01 0.0265 0.025 0.427 CD8T L1
ENSG00000118515 SGK1 -888101 sc-eQTL 6.45e-01 -0.0178 0.0386 0.427 CD8T L1
ENSG00000146409 SLC18B1 616672 sc-eQTL 8.68e-01 0.0126 0.0758 0.427 CD8T L1
ENSG00000028839 TBPL1 -522159 sc-eQTL 8.05e-01 -0.0223 0.0903 0.43 DC L1
ENSG00000079950 STX7 916813 sc-eQTL 7.77e-01 -0.0159 0.0561 0.43 DC L1
ENSG00000093134 VNN3 695246 sc-eQTL 1.69e-01 0.0956 0.0693 0.43 DC L1
ENSG00000112299 VNN1 715956 sc-eQTL 5.10e-01 0.0495 0.0751 0.43 DC L1
ENSG00000112303 VNN2 666552 sc-eQTL 5.75e-01 0.0451 0.0803 0.43 DC L1
ENSG00000112306 RPS12 615442 sc-eQTL 3.61e-01 0.0412 0.045 0.43 DC L1
ENSG00000118515 SGK1 -888101 sc-eQTL 8.22e-02 -0.0907 0.0519 0.43 DC L1
ENSG00000146409 SLC18B1 616672 sc-eQTL 4.37e-01 -0.0555 0.0712 0.43 DC L1
ENSG00000286438 AL591115.1 326883 sc-eQTL 7.11e-01 0.0241 0.0649 0.43 DC L1
ENSG00000286887 AL355881.1 -866290 sc-eQTL 6.46e-01 -0.0372 0.0809 0.43 DC L1
ENSG00000028839 TBPL1 -522159 sc-eQTL 8.21e-01 0.0146 0.0641 0.427 Mono L1
ENSG00000079950 STX7 916813 sc-eQTL 4.04e-01 0.0358 0.0428 0.427 Mono L1
ENSG00000093134 VNN3 695246 sc-eQTL 3.11e-01 0.0746 0.0735 0.427 Mono L1
ENSG00000112299 VNN1 715956 sc-eQTL 1.04e-01 -0.129 0.0787 0.427 Mono L1
ENSG00000112303 VNN2 666552 sc-eQTL 2.16e-01 0.0691 0.0557 0.427 Mono L1
ENSG00000112306 RPS12 615442 sc-eQTL 8.58e-01 0.00598 0.0335 0.427 Mono L1
ENSG00000118515 SGK1 -888101 sc-eQTL 6.00e-02 -0.0887 0.0469 0.427 Mono L1
ENSG00000146409 SLC18B1 616672 sc-eQTL 1.29e-01 0.101 0.0659 0.427 Mono L1
ENSG00000286887 AL355881.1 -866290 sc-eQTL 3.27e-02 -0.139 0.0644 0.427 Mono L1
ENSG00000028839 TBPL1 -522159 sc-eQTL 9.53e-01 0.00416 0.0705 0.429 NK L1
ENSG00000079950 STX7 916813 sc-eQTL 2.63e-01 0.073 0.065 0.429 NK L1
ENSG00000112303 VNN2 666552 sc-eQTL 6.52e-01 0.0367 0.0811 0.429 NK L1
ENSG00000112306 RPS12 615442 sc-eQTL 9.14e-01 -0.00365 0.0336 0.429 NK L1
ENSG00000118515 SGK1 -888101 sc-eQTL 1.44e-01 -0.0905 0.0618 0.429 NK L1
ENSG00000028839 TBPL1 -522159 sc-eQTL 7.44e-01 0.0264 0.0809 0.427 Other_T L1
ENSG00000079950 STX7 916813 sc-eQTL 6.98e-01 -0.0247 0.0636 0.427 Other_T L1
ENSG00000112303 VNN2 666552 sc-eQTL 7.30e-01 0.0266 0.077 0.427 Other_T L1
ENSG00000112306 RPS12 615442 sc-eQTL 4.03e-01 -0.0255 0.0305 0.427 Other_T L1
ENSG00000118515 SGK1 -888101 sc-eQTL 7.22e-02 -0.101 0.0557 0.427 Other_T L1
ENSG00000146409 SLC18B1 616672 sc-eQTL 4.69e-01 -0.0606 0.0835 0.427 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -522159 sc-eQTL 2.70e-01 0.103 0.0931 0.439 B_Activated L2
ENSG00000079950 STX7 916813 sc-eQTL 5.28e-01 0.0505 0.0799 0.439 B_Activated L2
ENSG00000112303 VNN2 666552 sc-eQTL 8.38e-01 -0.0174 0.0851 0.439 B_Activated L2
ENSG00000112306 RPS12 615442 sc-eQTL 3.37e-01 0.0438 0.0455 0.439 B_Activated L2
ENSG00000118515 SGK1 -888101 sc-eQTL 4.38e-02 -0.163 0.0804 0.439 B_Activated L2
ENSG00000146409 SLC18B1 616672 sc-eQTL 6.76e-02 0.145 0.0791 0.439 B_Activated L2
ENSG00000028839 TBPL1 -522159 sc-eQTL 5.29e-01 -0.0564 0.0893 0.427 B_Intermediate L2
ENSG00000079950 STX7 916813 sc-eQTL 7.49e-01 0.0164 0.0514 0.427 B_Intermediate L2
ENSG00000112303 VNN2 666552 sc-eQTL 4.15e-02 0.157 0.0766 0.427 B_Intermediate L2
ENSG00000112306 RPS12 615442 sc-eQTL 7.22e-01 0.0169 0.0474 0.427 B_Intermediate L2
ENSG00000118515 SGK1 -888101 sc-eQTL 5.16e-02 -0.159 0.0812 0.427 B_Intermediate L2
ENSG00000146409 SLC18B1 616672 sc-eQTL 4.19e-01 -0.069 0.0852 0.427 B_Intermediate L2
ENSG00000028839 TBPL1 -522159 sc-eQTL 2.00e-01 0.11 0.0857 0.429 B_Memory L2
ENSG00000079950 STX7 916813 sc-eQTL 9.81e-01 -0.00147 0.0623 0.429 B_Memory L2
ENSG00000112303 VNN2 666552 sc-eQTL 5.71e-01 -0.0462 0.0814 0.429 B_Memory L2
ENSG00000112306 RPS12 615442 sc-eQTL 2.80e-01 0.0424 0.0391 0.429 B_Memory L2
ENSG00000118515 SGK1 -888101 sc-eQTL 2.27e-02 -0.163 0.0711 0.429 B_Memory L2
ENSG00000146409 SLC18B1 616672 sc-eQTL 1.98e-01 -0.105 0.0816 0.429 B_Memory L2
ENSG00000028839 TBPL1 -522159 sc-eQTL 9.86e-01 0.00138 0.0806 0.427 B_Naive1 L2
ENSG00000079950 STX7 916813 sc-eQTL 8.56e-01 -0.00701 0.0387 0.427 B_Naive1 L2
ENSG00000112303 VNN2 666552 sc-eQTL 4.68e-01 0.0546 0.0751 0.427 B_Naive1 L2
ENSG00000112306 RPS12 615442 sc-eQTL 3.51e-01 -0.04 0.0428 0.427 B_Naive1 L2
ENSG00000118515 SGK1 -888101 sc-eQTL 4.80e-01 -0.0474 0.0669 0.427 B_Naive1 L2
ENSG00000146409 SLC18B1 616672 sc-eQTL 8.10e-02 0.144 0.0821 0.427 B_Naive1 L2
ENSG00000028839 TBPL1 -522159 sc-eQTL 5.48e-01 0.0526 0.0873 0.429 B_Naive2 L2
ENSG00000079950 STX7 916813 sc-eQTL 5.76e-01 0.026 0.0464 0.429 B_Naive2 L2
ENSG00000112303 VNN2 666552 sc-eQTL 6.36e-01 0.0404 0.0852 0.429 B_Naive2 L2
ENSG00000112306 RPS12 615442 sc-eQTL 8.40e-01 0.00913 0.0451 0.429 B_Naive2 L2
ENSG00000118515 SGK1 -888101 sc-eQTL 8.23e-01 -0.0178 0.0797 0.429 B_Naive2 L2
ENSG00000146409 SLC18B1 616672 sc-eQTL 8.60e-01 -0.0153 0.0861 0.429 B_Naive2 L2
ENSG00000028839 TBPL1 -522159 sc-eQTL 7.80e-02 -0.151 0.0853 0.423 CD4_CTL L2
ENSG00000079950 STX7 916813 sc-eQTL 2.56e-01 -0.097 0.0851 0.423 CD4_CTL L2
ENSG00000112303 VNN2 666552 sc-eQTL 2.31e-01 0.103 0.0858 0.423 CD4_CTL L2
ENSG00000112306 RPS12 615442 sc-eQTL 5.66e-01 0.0229 0.0397 0.423 CD4_CTL L2
ENSG00000118515 SGK1 -888101 sc-eQTL 3.26e-01 -0.0677 0.0688 0.423 CD4_CTL L2
ENSG00000146409 SLC18B1 616672 sc-eQTL 7.19e-01 -0.0289 0.0802 0.423 CD4_CTL L2
ENSG00000028839 TBPL1 -522159 sc-eQTL 7.61e-01 0.0211 0.069 0.427 CD4_Naive L2
ENSG00000079950 STX7 916813 sc-eQTL 4.98e-03 -0.189 0.0665 0.427 CD4_Naive L2
ENSG00000112303 VNN2 666552 sc-eQTL 3.60e-01 -0.0574 0.0626 0.427 CD4_Naive L2
ENSG00000112306 RPS12 615442 sc-eQTL 7.76e-01 -0.0116 0.0407 0.427 CD4_Naive L2
ENSG00000118515 SGK1 -888101 sc-eQTL 9.03e-02 -0.0842 0.0495 0.427 CD4_Naive L2
ENSG00000146409 SLC18B1 616672 sc-eQTL 1.11e-01 -0.124 0.0779 0.427 CD4_Naive L2
ENSG00000028839 TBPL1 -522159 sc-eQTL 9.51e-01 -0.00457 0.0751 0.427 CD4_TCM L2
ENSG00000079950 STX7 916813 sc-eQTL 4.71e-01 0.0545 0.0755 0.427 CD4_TCM L2
ENSG00000112303 VNN2 666552 sc-eQTL 2.34e-02 0.168 0.0736 0.427 CD4_TCM L2
ENSG00000112306 RPS12 615442 sc-eQTL 5.05e-01 0.0258 0.0386 0.427 CD4_TCM L2
ENSG00000118515 SGK1 -888101 sc-eQTL 1.21e-01 -0.0837 0.0537 0.427 CD4_TCM L2
ENSG00000146409 SLC18B1 616672 sc-eQTL 6.89e-01 0.0358 0.0894 0.427 CD4_TCM L2
ENSG00000028839 TBPL1 -522159 sc-eQTL 4.59e-01 0.064 0.0862 0.427 CD4_TEM L2
ENSG00000079950 STX7 916813 sc-eQTL 7.24e-01 0.0306 0.0864 0.427 CD4_TEM L2
ENSG00000112303 VNN2 666552 sc-eQTL 2.33e-01 -0.0989 0.0827 0.427 CD4_TEM L2
ENSG00000112306 RPS12 615442 sc-eQTL 9.36e-01 0.00275 0.034 0.427 CD4_TEM L2
ENSG00000118515 SGK1 -888101 sc-eQTL 5.92e-02 -0.11 0.058 0.427 CD4_TEM L2
ENSG00000146409 SLC18B1 616672 sc-eQTL 4.38e-01 -0.0656 0.0845 0.427 CD4_TEM L2
ENSG00000028839 TBPL1 -522159 sc-eQTL 5.10e-01 0.05 0.0758 0.427 CD8_CTL L2
ENSG00000079950 STX7 916813 sc-eQTL 3.30e-01 0.069 0.0707 0.427 CD8_CTL L2
ENSG00000112303 VNN2 666552 sc-eQTL 3.55e-01 0.0745 0.0804 0.427 CD8_CTL L2
ENSG00000112306 RPS12 615442 sc-eQTL 9.62e-01 -0.00208 0.0431 0.427 CD8_CTL L2
ENSG00000118515 SGK1 -888101 sc-eQTL 2.63e-02 -0.161 0.072 0.427 CD8_CTL L2
ENSG00000146409 SLC18B1 616672 sc-eQTL 6.70e-01 0.0356 0.0835 0.427 CD8_CTL L2
ENSG00000028839 TBPL1 -522159 sc-eQTL 2.02e-01 -0.102 0.0796 0.427 CD8_Naive L2
ENSG00000079950 STX7 916813 sc-eQTL 5.43e-01 0.0519 0.0851 0.427 CD8_Naive L2
ENSG00000112303 VNN2 666552 sc-eQTL 9.63e-01 -0.00343 0.0735 0.427 CD8_Naive L2
ENSG00000112306 RPS12 615442 sc-eQTL 4.27e-01 0.0334 0.042 0.427 CD8_Naive L2
ENSG00000118515 SGK1 -888101 sc-eQTL 3.78e-01 -0.0465 0.0527 0.427 CD8_Naive L2
ENSG00000146409 SLC18B1 616672 sc-eQTL 9.71e-01 0.00311 0.0844 0.427 CD8_Naive L2
ENSG00000028839 TBPL1 -522159 sc-eQTL 8.29e-01 -0.0197 0.091 0.426 CD8_TCM L2
ENSG00000079950 STX7 916813 sc-eQTL 2.36e-01 -0.0998 0.0839 0.426 CD8_TCM L2
ENSG00000112303 VNN2 666552 sc-eQTL 3.77e-01 0.0739 0.0834 0.426 CD8_TCM L2
ENSG00000112306 RPS12 615442 sc-eQTL 8.25e-01 -0.009 0.0407 0.426 CD8_TCM L2
ENSG00000118515 SGK1 -888101 sc-eQTL 7.75e-03 -0.178 0.0662 0.426 CD8_TCM L2
ENSG00000146409 SLC18B1 616672 sc-eQTL 6.27e-01 0.0435 0.0892 0.426 CD8_TCM L2
ENSG00000028839 TBPL1 -522159 sc-eQTL 8.01e-01 -0.0207 0.0821 0.418 CD8_TEM L2
ENSG00000079950 STX7 916813 sc-eQTL 4.71e-01 -0.0647 0.0895 0.418 CD8_TEM L2
ENSG00000112303 VNN2 666552 sc-eQTL 7.79e-01 -0.0251 0.0891 0.418 CD8_TEM L2
ENSG00000112306 RPS12 615442 sc-eQTL 1.14e-01 -0.0757 0.0476 0.418 CD8_TEM L2
ENSG00000118515 SGK1 -888101 sc-eQTL 6.65e-01 0.0341 0.0785 0.418 CD8_TEM L2
ENSG00000146409 SLC18B1 616672 sc-eQTL 3.05e-01 -0.0929 0.0904 0.418 CD8_TEM L2
ENSG00000028839 TBPL1 -522159 sc-eQTL 8.48e-02 -0.147 0.085 0.426 MAIT L2
ENSG00000079950 STX7 916813 sc-eQTL 3.58e-01 -0.0749 0.0812 0.426 MAIT L2
ENSG00000112303 VNN2 666552 sc-eQTL 2.63e-01 0.0926 0.0825 0.426 MAIT L2
ENSG00000112306 RPS12 615442 sc-eQTL 6.63e-01 0.0178 0.0407 0.426 MAIT L2
ENSG00000118515 SGK1 -888101 sc-eQTL 7.06e-02 -0.103 0.0568 0.426 MAIT L2
ENSG00000146409 SLC18B1 616672 sc-eQTL 6.62e-01 -0.0374 0.0853 0.426 MAIT L2
ENSG00000028839 TBPL1 -522159 sc-eQTL 6.34e-01 0.0438 0.0919 0.429 NK_CD56bright L2
ENSG00000079950 STX7 916813 sc-eQTL 8.87e-01 -0.0122 0.0853 0.429 NK_CD56bright L2
ENSG00000112303 VNN2 666552 sc-eQTL 2.19e-01 -0.106 0.0863 0.429 NK_CD56bright L2
ENSG00000112306 RPS12 615442 sc-eQTL 7.69e-01 0.0142 0.0482 0.429 NK_CD56bright L2
ENSG00000118515 SGK1 -888101 sc-eQTL 2.61e-01 -0.081 0.0719 0.429 NK_CD56bright L2
ENSG00000028839 TBPL1 -522159 sc-eQTL 7.13e-01 0.0279 0.0756 0.429 NK_CD56dim L2
ENSG00000079950 STX7 916813 sc-eQTL 2.96e-01 0.0724 0.0691 0.429 NK_CD56dim L2
ENSG00000112303 VNN2 666552 sc-eQTL 3.65e-01 0.0785 0.0865 0.429 NK_CD56dim L2
ENSG00000112306 RPS12 615442 sc-eQTL 9.83e-01 0.00074 0.0344 0.429 NK_CD56dim L2
ENSG00000118515 SGK1 -888101 sc-eQTL 1.40e-01 -0.112 0.0758 0.429 NK_CD56dim L2
ENSG00000028839 TBPL1 -522159 sc-eQTL 2.64e-01 -0.105 0.0935 0.422 NK_HLA L2
ENSG00000079950 STX7 916813 sc-eQTL 6.84e-01 0.0348 0.0853 0.422 NK_HLA L2
ENSG00000112303 VNN2 666552 sc-eQTL 7.54e-01 0.0271 0.0863 0.422 NK_HLA L2
ENSG00000112306 RPS12 615442 sc-eQTL 8.67e-01 -0.00677 0.0402 0.422 NK_HLA L2
ENSG00000118515 SGK1 -888101 sc-eQTL 9.44e-01 -0.00557 0.0795 0.422 NK_HLA L2
ENSG00000028839 TBPL1 -522159 sc-eQTL 7.41e-01 -0.0259 0.0783 0.429 NK_cytokine L2
ENSG00000079950 STX7 916813 sc-eQTL 6.17e-01 -0.038 0.0758 0.429 NK_cytokine L2
ENSG00000112303 VNN2 666552 sc-eQTL 9.37e-01 -0.00678 0.0853 0.429 NK_cytokine L2
ENSG00000112306 RPS12 615442 sc-eQTL 8.77e-01 -0.00719 0.0463 0.429 NK_cytokine L2
ENSG00000118515 SGK1 -888101 sc-eQTL 3.87e-01 -0.0667 0.0769 0.429 NK_cytokine L2
ENSG00000028839 TBPL1 -522159 sc-eQTL 6.94e-02 -0.193 0.105 0.433 PB L2
ENSG00000079950 STX7 916813 sc-eQTL 5.68e-01 0.0435 0.076 0.433 PB L2
ENSG00000112303 VNN2 666552 sc-eQTL 7.42e-02 0.165 0.0917 0.433 PB L2
ENSG00000112306 RPS12 615442 sc-eQTL 4.52e-01 0.0397 0.0527 0.433 PB L2
ENSG00000118515 SGK1 -888101 sc-eQTL 2.99e-02 -0.184 0.0835 0.433 PB L2
ENSG00000146409 SLC18B1 616672 sc-eQTL 8.37e-01 -0.0205 0.0989 0.433 PB L2
ENSG00000028839 TBPL1 -522159 sc-eQTL 7.16e-01 0.0312 0.0856 0.426 Pro_T L2
ENSG00000079950 STX7 916813 sc-eQTL 5.64e-01 -0.0442 0.0764 0.426 Pro_T L2
ENSG00000112303 VNN2 666552 sc-eQTL 5.41e-01 0.0502 0.0819 0.426 Pro_T L2
ENSG00000112306 RPS12 615442 sc-eQTL 5.46e-02 -0.0594 0.0307 0.426 Pro_T L2
ENSG00000118515 SGK1 -888101 sc-eQTL 5.57e-01 -0.0365 0.0621 0.426 Pro_T L2
ENSG00000146409 SLC18B1 616672 sc-eQTL 9.56e-01 0.00441 0.0803 0.426 Pro_T L2
ENSG00000028839 TBPL1 -522159 sc-eQTL 9.76e-01 -0.00269 0.0894 0.427 Treg L2
ENSG00000079950 STX7 916813 sc-eQTL 3.42e-02 -0.178 0.0834 0.427 Treg L2
ENSG00000112303 VNN2 666552 sc-eQTL 3.83e-01 0.0618 0.0708 0.427 Treg L2
ENSG00000112306 RPS12 615442 sc-eQTL 2.46e-01 -0.0364 0.0313 0.427 Treg L2
ENSG00000118515 SGK1 -888101 sc-eQTL 5.96e-01 0.0351 0.066 0.427 Treg L2
ENSG00000146409 SLC18B1 616672 sc-eQTL 1.29e-01 -0.134 0.0881 0.427 Treg L2
ENSG00000028839 TBPL1 -522159 sc-eQTL 5.38e-01 -0.0569 0.0922 0.422 cDC L2
ENSG00000079950 STX7 916813 sc-eQTL 9.49e-01 -0.00461 0.0724 0.422 cDC L2
ENSG00000093134 VNN3 695246 sc-eQTL 3.67e-01 0.0649 0.0718 0.422 cDC L2
ENSG00000112299 VNN1 715956 sc-eQTL 7.12e-01 0.0313 0.0846 0.422 cDC L2
ENSG00000112303 VNN2 666552 sc-eQTL 2.11e-01 0.103 0.0821 0.422 cDC L2
ENSG00000112306 RPS12 615442 sc-eQTL 9.43e-02 0.0679 0.0404 0.422 cDC L2
ENSG00000118515 SGK1 -888101 sc-eQTL 2.34e-03 -0.206 0.0668 0.422 cDC L2
ENSG00000146409 SLC18B1 616672 sc-eQTL 2.81e-01 -0.0868 0.0803 0.422 cDC L2
ENSG00000286438 AL591115.1 326883 sc-eQTL 8.53e-02 0.111 0.0639 0.422 cDC L2
ENSG00000286887 AL355881.1 -866290 sc-eQTL 9.27e-02 -0.133 0.0787 0.422 cDC L2
ENSG00000028839 TBPL1 -522159 sc-eQTL 7.64e-01 0.0219 0.0728 0.427 cMono_IL1B L2
ENSG00000079950 STX7 916813 sc-eQTL 3.06e-01 0.0566 0.0551 0.427 cMono_IL1B L2
ENSG00000093134 VNN3 695246 sc-eQTL 7.35e-01 0.0265 0.0781 0.427 cMono_IL1B L2
ENSG00000112299 VNN1 715956 sc-eQTL 3.65e-02 -0.164 0.078 0.427 cMono_IL1B L2
ENSG00000112303 VNN2 666552 sc-eQTL 6.78e-02 0.115 0.0625 0.427 cMono_IL1B L2
ENSG00000112306 RPS12 615442 sc-eQTL 9.78e-01 -0.000961 0.035 0.427 cMono_IL1B L2
ENSG00000118515 SGK1 -888101 sc-eQTL 1.23e-01 -0.0804 0.0519 0.427 cMono_IL1B L2
ENSG00000146409 SLC18B1 616672 sc-eQTL 3.89e-01 0.0581 0.0674 0.427 cMono_IL1B L2
ENSG00000286887 AL355881.1 -866290 sc-eQTL 1.32e-01 -0.106 0.0699 0.427 cMono_IL1B L2
ENSG00000028839 TBPL1 -522159 sc-eQTL 8.42e-01 0.0166 0.0828 0.427 cMono_S100A L2
ENSG00000079950 STX7 916813 sc-eQTL 7.96e-01 -0.0155 0.0598 0.427 cMono_S100A L2
ENSG00000093134 VNN3 695246 sc-eQTL 1.48e-01 0.108 0.0743 0.427 cMono_S100A L2
ENSG00000112299 VNN1 715956 sc-eQTL 6.39e-01 -0.038 0.081 0.427 cMono_S100A L2
ENSG00000112303 VNN2 666552 sc-eQTL 2.99e-01 0.0551 0.053 0.427 cMono_S100A L2
ENSG00000112306 RPS12 615442 sc-eQTL 9.30e-01 -0.00337 0.0382 0.427 cMono_S100A L2
ENSG00000118515 SGK1 -888101 sc-eQTL 1.65e-02 -0.104 0.0431 0.427 cMono_S100A L2
ENSG00000146409 SLC18B1 616672 sc-eQTL 1.32e-02 0.174 0.0698 0.427 cMono_S100A L2
ENSG00000286887 AL355881.1 -866290 sc-eQTL 3.99e-02 -0.142 0.0685 0.427 cMono_S100A L2
ENSG00000028839 TBPL1 -522159 sc-eQTL 3.08e-01 0.113 0.111 0.397 gdT L2
ENSG00000079950 STX7 916813 sc-eQTL 3.81e-01 0.0837 0.0952 0.397 gdT L2
ENSG00000112303 VNN2 666552 sc-eQTL 4.24e-01 -0.0845 0.105 0.397 gdT L2
ENSG00000112306 RPS12 615442 sc-eQTL 3.96e-01 -0.0341 0.0401 0.397 gdT L2
ENSG00000118515 SGK1 -888101 sc-eQTL 7.42e-02 -0.135 0.075 0.397 gdT L2
ENSG00000146409 SLC18B1 616672 sc-eQTL 8.82e-01 0.0155 0.104 0.397 gdT L2
ENSG00000028839 TBPL1 -522159 sc-eQTL 9.99e-01 5.6e-05 0.0849 0.427 intMono L2
ENSG00000079950 STX7 916813 sc-eQTL 6.74e-01 0.0341 0.081 0.427 intMono L2
ENSG00000093134 VNN3 695246 sc-eQTL 3.24e-02 0.174 0.0809 0.427 intMono L2
ENSG00000112299 VNN1 715956 sc-eQTL 7.03e-01 -0.0309 0.0809 0.427 intMono L2
ENSG00000112303 VNN2 666552 sc-eQTL 7.69e-01 -0.0242 0.0822 0.427 intMono L2
ENSG00000112306 RPS12 615442 sc-eQTL 7.05e-01 -0.0136 0.0358 0.427 intMono L2
ENSG00000118515 SGK1 -888101 sc-eQTL 1.89e-01 -0.0788 0.0598 0.427 intMono L2
ENSG00000146409 SLC18B1 616672 sc-eQTL 2.29e-02 -0.197 0.086 0.427 intMono L2
ENSG00000286887 AL355881.1 -866290 sc-eQTL 5.52e-01 -0.0496 0.0832 0.427 intMono L2
ENSG00000028839 TBPL1 -522159 sc-eQTL 5.38e-01 -0.0545 0.0884 0.425 ncMono L2
ENSG00000079950 STX7 916813 sc-eQTL 5.89e-01 -0.0323 0.0598 0.425 ncMono L2
ENSG00000093134 VNN3 695246 sc-eQTL 8.59e-01 0.015 0.0844 0.425 ncMono L2
ENSG00000112299 VNN1 715956 sc-eQTL 3.70e-01 -0.0752 0.0837 0.425 ncMono L2
ENSG00000112303 VNN2 666552 sc-eQTL 6.30e-01 -0.0389 0.0805 0.425 ncMono L2
ENSG00000112306 RPS12 615442 sc-eQTL 5.72e-01 0.0229 0.0404 0.425 ncMono L2
ENSG00000118515 SGK1 -888101 sc-eQTL 4.75e-02 -0.113 0.0566 0.425 ncMono L2
ENSG00000146409 SLC18B1 616672 sc-eQTL 5.60e-01 0.0417 0.0713 0.425 ncMono L2
ENSG00000286887 AL355881.1 -866290 sc-eQTL 1.32e-01 -0.114 0.0751 0.425 ncMono L2
ENSG00000028839 TBPL1 -522159 sc-eQTL 7.88e-01 0.0271 0.101 0.412 pDC L2
ENSG00000079950 STX7 916813 sc-eQTL 9.83e-02 0.11 0.0664 0.412 pDC L2
ENSG00000093134 VNN3 695246 sc-eQTL 2.49e-01 0.0777 0.0672 0.412 pDC L2
ENSG00000112299 VNN1 715956 sc-eQTL 2.22e-01 0.0837 0.0683 0.412 pDC L2
ENSG00000112303 VNN2 666552 sc-eQTL 1.72e-01 0.111 0.0812 0.412 pDC L2
ENSG00000112306 RPS12 615442 sc-eQTL 6.82e-01 -0.0231 0.0563 0.412 pDC L2
ENSG00000118515 SGK1 -888101 sc-eQTL 8.03e-01 -0.0143 0.0572 0.412 pDC L2
ENSG00000146409 SLC18B1 616672 sc-eQTL 8.13e-01 -0.0197 0.0833 0.412 pDC L2
ENSG00000286438 AL591115.1 326883 sc-eQTL 9.76e-01 -0.00239 0.0797 0.412 pDC L2
ENSG00000286887 AL355881.1 -866290 sc-eQTL 4.83e-01 0.0496 0.0706 0.412 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -522159 sc-eQTL 7.95e-01 0.0223 0.086 0.427 B_Memory LOneK1K
ENSG00000079950 STX7 916813 sc-eQTL 4.93e-01 0.0325 0.0473 0.427 B_Memory LOneK1K
ENSG00000112303 VNN2 666552 sc-eQTL 8.57e-01 0.0135 0.0749 0.427 B_Memory LOneK1K
ENSG00000112306 RPS12 615442 sc-eQTL 7.81e-01 0.0119 0.0427 0.427 B_Memory LOneK1K
ENSG00000118515 SGK1 -888101 sc-eQTL 2.06e-02 -0.154 0.0659 0.427 B_Memory LOneK1K
ENSG00000146409 SLC18B1 616672 sc-eQTL 5.75e-01 -0.0439 0.0783 0.427 B_Memory LOneK1K
ENSG00000028839 TBPL1 -522159 sc-eQTL 7.37e-01 -0.0272 0.0809 0.427 B_Naive LOneK1K
ENSG00000079950 STX7 916813 sc-eQTL 8.02e-01 -0.00914 0.0364 0.427 B_Naive LOneK1K
ENSG00000112303 VNN2 666552 sc-eQTL 2.89e-01 0.075 0.0706 0.427 B_Naive LOneK1K
ENSG00000112306 RPS12 615442 sc-eQTL 5.02e-01 -0.0288 0.0428 0.427 B_Naive LOneK1K
ENSG00000118515 SGK1 -888101 sc-eQTL 2.91e-01 -0.07 0.0661 0.427 B_Naive LOneK1K
ENSG00000146409 SLC18B1 616672 sc-eQTL 4.16e-01 0.0658 0.0806 0.427 B_Naive LOneK1K
ENSG00000028839 TBPL1 -522159 sc-eQTL 7.94e-01 0.0173 0.0663 0.427 CD14_Mono LOneK1K
ENSG00000079950 STX7 916813 sc-eQTL 3.87e-01 0.04 0.0461 0.427 CD14_Mono LOneK1K
ENSG00000093134 VNN3 695246 sc-eQTL 4.91e-01 0.0519 0.0751 0.427 CD14_Mono LOneK1K
ENSG00000112299 VNN1 715956 sc-eQTL 7.38e-02 -0.14 0.0779 0.427 CD14_Mono LOneK1K
ENSG00000112303 VNN2 666552 sc-eQTL 2.41e-01 0.0607 0.0517 0.427 CD14_Mono LOneK1K
ENSG00000112306 RPS12 615442 sc-eQTL 9.30e-01 -0.00315 0.0356 0.427 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -888101 sc-eQTL 6.25e-02 -0.09 0.0481 0.427 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 616672 sc-eQTL 1.01e-01 0.104 0.0629 0.427 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -866290 sc-eQTL 7.01e-02 -0.12 0.0659 0.427 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -522159 sc-eQTL 9.48e-01 0.00561 0.0866 0.429 CD16_Mono LOneK1K
ENSG00000079950 STX7 916813 sc-eQTL 9.19e-01 -0.00583 0.0571 0.429 CD16_Mono LOneK1K
ENSG00000093134 VNN3 695246 sc-eQTL 3.73e-02 0.174 0.0832 0.429 CD16_Mono LOneK1K
ENSG00000112299 VNN1 715956 sc-eQTL 5.06e-01 -0.0555 0.0832 0.429 CD16_Mono LOneK1K
ENSG00000112303 VNN2 666552 sc-eQTL 7.46e-01 -0.0254 0.0785 0.429 CD16_Mono LOneK1K
ENSG00000112306 RPS12 615442 sc-eQTL 7.11e-01 0.0124 0.0333 0.429 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -888101 sc-eQTL 6.64e-02 -0.0923 0.05 0.429 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 616672 sc-eQTL 1.27e-01 -0.123 0.0805 0.429 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -866290 sc-eQTL 6.28e-02 -0.136 0.0726 0.429 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -522159 sc-eQTL 8.73e-01 -0.0112 0.0699 0.429 NK_CD56dim LOneK1K
ENSG00000079950 STX7 916813 sc-eQTL 2.12e-01 0.0818 0.0654 0.429 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 666552 sc-eQTL 3.42e-01 0.0789 0.0829 0.429 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 615442 sc-eQTL 9.71e-01 0.00123 0.0339 0.429 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -888101 sc-eQTL 1.11e-01 -0.112 0.0696 0.429 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079950 STX7 916813 eQTL 0.00566 -0.043 0.0155 0.0 0.0 0.432

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina