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Genes within 1Mb (chr6:133427243:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -524927 sc-eQTL 7.58e-01 0.0278 0.0901 0.675 B L1
ENSG00000079950 STX7 914045 sc-eQTL 7.37e-02 0.0641 0.0356 0.675 B L1
ENSG00000112303 VNN2 663784 sc-eQTL 6.91e-01 0.0268 0.0675 0.675 B L1
ENSG00000112306 RPS12 612674 sc-eQTL 5.22e-01 0.0261 0.0408 0.675 B L1
ENSG00000118515 SGK1 -890869 sc-eQTL 5.66e-02 -0.12 0.0624 0.675 B L1
ENSG00000146409 SLC18B1 613904 sc-eQTL 5.54e-01 0.0509 0.0858 0.675 B L1
ENSG00000028839 TBPL1 -524927 sc-eQTL 5.65e-01 -0.0381 0.066 0.675 CD4T L1
ENSG00000079950 STX7 914045 sc-eQTL 9.51e-01 -0.00424 0.0687 0.675 CD4T L1
ENSG00000112303 VNN2 663784 sc-eQTL 7.06e-01 0.0225 0.0594 0.675 CD4T L1
ENSG00000112306 RPS12 612674 sc-eQTL 7.22e-01 -0.0144 0.0404 0.675 CD4T L1
ENSG00000118515 SGK1 -890869 sc-eQTL 9.05e-02 -0.0918 0.054 0.675 CD4T L1
ENSG00000146409 SLC18B1 613904 sc-eQTL 7.78e-01 0.0231 0.0818 0.675 CD4T L1
ENSG00000028839 TBPL1 -524927 sc-eQTL 9.89e-01 0.000917 0.0664 0.675 CD8T L1
ENSG00000079950 STX7 914045 sc-eQTL 7.13e-01 0.0256 0.0693 0.675 CD8T L1
ENSG00000112303 VNN2 663784 sc-eQTL 8.81e-01 -0.0121 0.0809 0.675 CD8T L1
ENSG00000112306 RPS12 612674 sc-eQTL 3.69e-01 0.0249 0.0276 0.675 CD8T L1
ENSG00000118515 SGK1 -890869 sc-eQTL 2.32e-01 -0.0509 0.0425 0.675 CD8T L1
ENSG00000146409 SLC18B1 613904 sc-eQTL 2.78e-01 0.0907 0.0834 0.675 CD8T L1
ENSG00000028839 TBPL1 -524927 sc-eQTL 9.69e-01 0.00389 0.0985 0.68 DC L1
ENSG00000079950 STX7 914045 sc-eQTL 7.96e-01 -0.0158 0.0612 0.68 DC L1
ENSG00000093134 VNN3 692478 sc-eQTL 6.97e-01 0.0296 0.0759 0.68 DC L1
ENSG00000112299 VNN1 713188 sc-eQTL 1.36e-01 0.122 0.0815 0.68 DC L1
ENSG00000112303 VNN2 663784 sc-eQTL 9.49e-01 0.0056 0.0876 0.68 DC L1
ENSG00000112306 RPS12 612674 sc-eQTL 7.61e-01 -0.015 0.0491 0.68 DC L1
ENSG00000118515 SGK1 -890869 sc-eQTL 3.83e-01 -0.0497 0.0569 0.68 DC L1
ENSG00000146409 SLC18B1 613904 sc-eQTL 7.61e-02 -0.138 0.0772 0.68 DC L1
ENSG00000286438 AL591115.1 324115 sc-eQTL 1.22e-01 0.109 0.0704 0.68 DC L1
ENSG00000286887 AL355881.1 -869058 sc-eQTL 7.91e-01 0.0234 0.0882 0.68 DC L1
ENSG00000028839 TBPL1 -524927 sc-eQTL 6.33e-01 0.0336 0.0703 0.675 Mono L1
ENSG00000079950 STX7 914045 sc-eQTL 2.20e-01 0.0577 0.0469 0.675 Mono L1
ENSG00000093134 VNN3 692478 sc-eQTL 7.68e-01 0.0239 0.0807 0.675 Mono L1
ENSG00000112299 VNN1 713188 sc-eQTL 9.95e-01 -0.000537 0.0869 0.675 Mono L1
ENSG00000112303 VNN2 663784 sc-eQTL 7.21e-01 0.0219 0.0613 0.675 Mono L1
ENSG00000112306 RPS12 612674 sc-eQTL 2.49e-01 -0.0423 0.0366 0.675 Mono L1
ENSG00000118515 SGK1 -890869 sc-eQTL 3.00e-01 -0.0537 0.0517 0.675 Mono L1
ENSG00000146409 SLC18B1 613904 sc-eQTL 5.16e-01 0.0473 0.0726 0.675 Mono L1
ENSG00000286887 AL355881.1 -869058 sc-eQTL 1.03e-01 -0.116 0.071 0.675 Mono L1
ENSG00000028839 TBPL1 -524927 sc-eQTL 6.86e-01 0.0314 0.0776 0.676 NK L1
ENSG00000079950 STX7 914045 sc-eQTL 1.20e-01 0.111 0.0714 0.676 NK L1
ENSG00000112303 VNN2 663784 sc-eQTL 5.56e-01 -0.0526 0.0893 0.676 NK L1
ENSG00000112306 RPS12 612674 sc-eQTL 2.98e-01 -0.0385 0.0369 0.676 NK L1
ENSG00000118515 SGK1 -890869 sc-eQTL 7.31e-02 -0.122 0.0679 0.676 NK L1
ENSG00000028839 TBPL1 -524927 sc-eQTL 4.81e-01 -0.0621 0.0879 0.675 Other_T L1
ENSG00000079950 STX7 914045 sc-eQTL 2.95e-01 0.0725 0.0691 0.675 Other_T L1
ENSG00000112303 VNN2 663784 sc-eQTL 9.42e-01 -0.00606 0.0838 0.675 Other_T L1
ENSG00000112306 RPS12 612674 sc-eQTL 1.46e-01 -0.0482 0.033 0.675 Other_T L1
ENSG00000118515 SGK1 -890869 sc-eQTL 1.64e-01 -0.0849 0.0608 0.675 Other_T L1
ENSG00000146409 SLC18B1 613904 sc-eQTL 6.60e-01 -0.04 0.0909 0.675 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -524927 sc-eQTL 3.97e-01 0.0876 0.103 0.676 B_Activated L2
ENSG00000079950 STX7 914045 sc-eQTL 8.08e-01 0.0215 0.0885 0.676 B_Activated L2
ENSG00000112303 VNN2 663784 sc-eQTL 2.57e-01 0.107 0.0939 0.676 B_Activated L2
ENSG00000112306 RPS12 612674 sc-eQTL 2.72e-01 0.0554 0.0503 0.676 B_Activated L2
ENSG00000118515 SGK1 -890869 sc-eQTL 3.92e-01 -0.0772 0.0898 0.676 B_Activated L2
ENSG00000146409 SLC18B1 613904 sc-eQTL 2.23e-01 0.108 0.088 0.676 B_Activated L2
ENSG00000028839 TBPL1 -524927 sc-eQTL 5.62e-01 0.0569 0.0979 0.674 B_Intermediate L2
ENSG00000079950 STX7 914045 sc-eQTL 2.18e-02 0.128 0.0556 0.674 B_Intermediate L2
ENSG00000112303 VNN2 663784 sc-eQTL 1.31e-01 0.128 0.0843 0.674 B_Intermediate L2
ENSG00000112306 RPS12 612674 sc-eQTL 7.28e-01 0.0181 0.0519 0.674 B_Intermediate L2
ENSG00000118515 SGK1 -890869 sc-eQTL 3.79e-02 -0.186 0.0888 0.674 B_Intermediate L2
ENSG00000146409 SLC18B1 613904 sc-eQTL 9.62e-01 0.00451 0.0935 0.674 B_Intermediate L2
ENSG00000028839 TBPL1 -524927 sc-eQTL 8.32e-01 0.0199 0.0941 0.677 B_Memory L2
ENSG00000079950 STX7 914045 sc-eQTL 1.71e-02 0.161 0.0672 0.677 B_Memory L2
ENSG00000112303 VNN2 663784 sc-eQTL 4.47e-01 0.0678 0.0889 0.677 B_Memory L2
ENSG00000112306 RPS12 612674 sc-eQTL 3.10e-01 0.0436 0.0428 0.677 B_Memory L2
ENSG00000118515 SGK1 -890869 sc-eQTL 5.41e-01 -0.0482 0.0787 0.677 B_Memory L2
ENSG00000146409 SLC18B1 613904 sc-eQTL 6.76e-01 -0.0375 0.0895 0.677 B_Memory L2
ENSG00000028839 TBPL1 -524927 sc-eQTL 7.88e-01 0.0242 0.0897 0.675 B_Naive1 L2
ENSG00000079950 STX7 914045 sc-eQTL 2.69e-01 0.0476 0.043 0.675 B_Naive1 L2
ENSG00000112303 VNN2 663784 sc-eQTL 1.65e-01 -0.116 0.0833 0.675 B_Naive1 L2
ENSG00000112306 RPS12 612674 sc-eQTL 9.88e-01 -0.000744 0.0477 0.675 B_Naive1 L2
ENSG00000118515 SGK1 -890869 sc-eQTL 7.36e-01 -0.0252 0.0746 0.675 B_Naive1 L2
ENSG00000146409 SLC18B1 613904 sc-eQTL 2.54e-01 0.105 0.0917 0.675 B_Naive1 L2
ENSG00000028839 TBPL1 -524927 sc-eQTL 6.89e-01 0.0389 0.0969 0.676 B_Naive2 L2
ENSG00000079950 STX7 914045 sc-eQTL 1.09e-01 0.0823 0.0512 0.676 B_Naive2 L2
ENSG00000112303 VNN2 663784 sc-eQTL 2.18e-01 0.117 0.0942 0.676 B_Naive2 L2
ENSG00000112306 RPS12 612674 sc-eQTL 1.88e-01 0.0659 0.0498 0.676 B_Naive2 L2
ENSG00000118515 SGK1 -890869 sc-eQTL 8.22e-01 -0.0199 0.0884 0.676 B_Naive2 L2
ENSG00000146409 SLC18B1 613904 sc-eQTL 9.73e-01 -0.00328 0.0955 0.676 B_Naive2 L2
ENSG00000028839 TBPL1 -524927 sc-eQTL 9.04e-01 0.0112 0.0925 0.67 CD4_CTL L2
ENSG00000079950 STX7 914045 sc-eQTL 6.68e-01 -0.0394 0.0919 0.67 CD4_CTL L2
ENSG00000112303 VNN2 663784 sc-eQTL 1.87e-01 0.122 0.0923 0.67 CD4_CTL L2
ENSG00000112306 RPS12 612674 sc-eQTL 5.74e-01 0.0241 0.0428 0.67 CD4_CTL L2
ENSG00000118515 SGK1 -890869 sc-eQTL 5.62e-01 -0.0431 0.0742 0.67 CD4_CTL L2
ENSG00000146409 SLC18B1 613904 sc-eQTL 3.11e-01 0.0875 0.0862 0.67 CD4_CTL L2
ENSG00000028839 TBPL1 -524927 sc-eQTL 3.36e-01 -0.0724 0.0751 0.675 CD4_Naive L2
ENSG00000079950 STX7 914045 sc-eQTL 2.13e-01 -0.0919 0.0735 0.675 CD4_Naive L2
ENSG00000112303 VNN2 663784 sc-eQTL 8.43e-01 -0.0135 0.0684 0.675 CD4_Naive L2
ENSG00000112306 RPS12 612674 sc-eQTL 6.66e-01 -0.0191 0.0443 0.675 CD4_Naive L2
ENSG00000118515 SGK1 -890869 sc-eQTL 9.41e-02 -0.0907 0.054 0.675 CD4_Naive L2
ENSG00000146409 SLC18B1 613904 sc-eQTL 8.92e-01 -0.0116 0.0854 0.675 CD4_Naive L2
ENSG00000028839 TBPL1 -524927 sc-eQTL 7.58e-01 0.0252 0.0817 0.675 CD4_TCM L2
ENSG00000079950 STX7 914045 sc-eQTL 2.74e-01 0.0901 0.0821 0.675 CD4_TCM L2
ENSG00000112303 VNN2 663784 sc-eQTL 6.16e-01 0.0407 0.0811 0.675 CD4_TCM L2
ENSG00000112306 RPS12 612674 sc-eQTL 6.64e-01 -0.0183 0.042 0.675 CD4_TCM L2
ENSG00000118515 SGK1 -890869 sc-eQTL 2.03e-01 -0.0748 0.0586 0.675 CD4_TCM L2
ENSG00000146409 SLC18B1 613904 sc-eQTL 1.22e-01 0.15 0.0968 0.675 CD4_TCM L2
ENSG00000028839 TBPL1 -524927 sc-eQTL 1.67e-01 0.131 0.0948 0.675 CD4_TEM L2
ENSG00000079950 STX7 914045 sc-eQTL 5.29e-01 0.06 0.0952 0.675 CD4_TEM L2
ENSG00000112303 VNN2 663784 sc-eQTL 8.41e-01 -0.0183 0.0915 0.675 CD4_TEM L2
ENSG00000112306 RPS12 612674 sc-eQTL 4.19e-01 -0.0304 0.0375 0.675 CD4_TEM L2
ENSG00000118515 SGK1 -890869 sc-eQTL 4.43e-02 -0.129 0.0638 0.675 CD4_TEM L2
ENSG00000146409 SLC18B1 613904 sc-eQTL 4.13e-01 0.0764 0.0931 0.675 CD4_TEM L2
ENSG00000028839 TBPL1 -524927 sc-eQTL 1.23e-01 0.13 0.0839 0.675 CD8_CTL L2
ENSG00000079950 STX7 914045 sc-eQTL 3.39e-01 0.0754 0.0787 0.675 CD8_CTL L2
ENSG00000112303 VNN2 663784 sc-eQTL 6.51e-01 0.0405 0.0895 0.675 CD8_CTL L2
ENSG00000112306 RPS12 612674 sc-eQTL 9.57e-01 -0.00259 0.0479 0.675 CD8_CTL L2
ENSG00000118515 SGK1 -890869 sc-eQTL 4.44e-01 -0.062 0.0808 0.675 CD8_CTL L2
ENSG00000146409 SLC18B1 613904 sc-eQTL 8.61e-01 -0.0162 0.0929 0.675 CD8_CTL L2
ENSG00000028839 TBPL1 -524927 sc-eQTL 3.11e-01 -0.0887 0.0873 0.675 CD8_Naive L2
ENSG00000079950 STX7 914045 sc-eQTL 1.89e-01 0.122 0.0929 0.675 CD8_Naive L2
ENSG00000112303 VNN2 663784 sc-eQTL 1.28e-01 -0.122 0.08 0.675 CD8_Naive L2
ENSG00000112306 RPS12 612674 sc-eQTL 6.55e-01 0.0206 0.0461 0.675 CD8_Naive L2
ENSG00000118515 SGK1 -890869 sc-eQTL 5.61e-02 -0.11 0.0573 0.675 CD8_Naive L2
ENSG00000146409 SLC18B1 613904 sc-eQTL 2.69e-01 0.102 0.0922 0.675 CD8_Naive L2
ENSG00000028839 TBPL1 -524927 sc-eQTL 2.27e-01 -0.12 0.0993 0.678 CD8_TCM L2
ENSG00000079950 STX7 914045 sc-eQTL 9.50e-01 0.00582 0.0922 0.678 CD8_TCM L2
ENSG00000112303 VNN2 663784 sc-eQTL 8.74e-01 0.0146 0.0915 0.678 CD8_TCM L2
ENSG00000112306 RPS12 612674 sc-eQTL 2.25e-01 -0.0541 0.0444 0.678 CD8_TCM L2
ENSG00000118515 SGK1 -890869 sc-eQTL 2.28e-01 -0.0889 0.0736 0.678 CD8_TCM L2
ENSG00000146409 SLC18B1 613904 sc-eQTL 7.18e-01 0.0353 0.0977 0.678 CD8_TCM L2
ENSG00000028839 TBPL1 -524927 sc-eQTL 6.09e-01 -0.0456 0.0892 0.667 CD8_TEM L2
ENSG00000079950 STX7 914045 sc-eQTL 5.54e-02 -0.186 0.0965 0.667 CD8_TEM L2
ENSG00000112303 VNN2 663784 sc-eQTL 3.85e-01 0.0842 0.0966 0.667 CD8_TEM L2
ENSG00000112306 RPS12 612674 sc-eQTL 9.29e-01 0.00462 0.0521 0.667 CD8_TEM L2
ENSG00000118515 SGK1 -890869 sc-eQTL 8.57e-01 0.0154 0.0854 0.667 CD8_TEM L2
ENSG00000146409 SLC18B1 613904 sc-eQTL 4.66e-01 0.0718 0.0984 0.667 CD8_TEM L2
ENSG00000028839 TBPL1 -524927 sc-eQTL 3.57e-02 -0.197 0.0932 0.673 MAIT L2
ENSG00000079950 STX7 914045 sc-eQTL 7.45e-01 -0.0292 0.0895 0.673 MAIT L2
ENSG00000112303 VNN2 663784 sc-eQTL 1.81e-01 0.122 0.0906 0.673 MAIT L2
ENSG00000112306 RPS12 612674 sc-eQTL 8.57e-02 -0.0768 0.0445 0.673 MAIT L2
ENSG00000118515 SGK1 -890869 sc-eQTL 3.60e-01 -0.0577 0.0629 0.673 MAIT L2
ENSG00000146409 SLC18B1 613904 sc-eQTL 6.50e-01 -0.0426 0.0938 0.673 MAIT L2
ENSG00000028839 TBPL1 -524927 sc-eQTL 6.13e-01 0.0509 0.1 0.671 NK_CD56bright L2
ENSG00000079950 STX7 914045 sc-eQTL 6.12e-01 -0.0473 0.0931 0.671 NK_CD56bright L2
ENSG00000112303 VNN2 663784 sc-eQTL 1.51e-01 -0.136 0.0941 0.671 NK_CD56bright L2
ENSG00000112306 RPS12 612674 sc-eQTL 8.90e-01 -0.00732 0.0527 0.671 NK_CD56bright L2
ENSG00000118515 SGK1 -890869 sc-eQTL 5.70e-01 -0.0448 0.0787 0.671 NK_CD56bright L2
ENSG00000028839 TBPL1 -524927 sc-eQTL 6.39e-01 0.039 0.083 0.677 NK_CD56dim L2
ENSG00000079950 STX7 914045 sc-eQTL 2.45e-01 0.0883 0.0758 0.677 NK_CD56dim L2
ENSG00000112303 VNN2 663784 sc-eQTL 4.36e-01 -0.0741 0.0949 0.677 NK_CD56dim L2
ENSG00000112306 RPS12 612674 sc-eQTL 4.60e-01 -0.0279 0.0377 0.677 NK_CD56dim L2
ENSG00000118515 SGK1 -890869 sc-eQTL 2.97e-01 -0.0871 0.0834 0.677 NK_CD56dim L2
ENSG00000028839 TBPL1 -524927 sc-eQTL 5.96e-01 -0.0544 0.102 0.669 NK_HLA L2
ENSG00000079950 STX7 914045 sc-eQTL 5.80e-01 0.0516 0.093 0.669 NK_HLA L2
ENSG00000112303 VNN2 663784 sc-eQTL 9.45e-01 -0.00653 0.0943 0.669 NK_HLA L2
ENSG00000112306 RPS12 612674 sc-eQTL 5.11e-01 -0.0289 0.0439 0.669 NK_HLA L2
ENSG00000118515 SGK1 -890869 sc-eQTL 7.98e-01 0.0222 0.0868 0.669 NK_HLA L2
ENSG00000028839 TBPL1 -524927 sc-eQTL 8.38e-01 -0.0176 0.086 0.677 NK_cytokine L2
ENSG00000079950 STX7 914045 sc-eQTL 3.24e-01 0.0822 0.0831 0.677 NK_cytokine L2
ENSG00000112303 VNN2 663784 sc-eQTL 7.99e-01 -0.0239 0.0936 0.677 NK_cytokine L2
ENSG00000112306 RPS12 612674 sc-eQTL 7.85e-01 -0.0139 0.0508 0.677 NK_cytokine L2
ENSG00000118515 SGK1 -890869 sc-eQTL 5.72e-02 -0.16 0.0839 0.677 NK_cytokine L2
ENSG00000028839 TBPL1 -524927 sc-eQTL 4.74e-01 -0.0823 0.115 0.678 PB L2
ENSG00000079950 STX7 914045 sc-eQTL 7.09e-01 -0.0306 0.0818 0.678 PB L2
ENSG00000112303 VNN2 663784 sc-eQTL 3.25e-01 0.0984 0.0996 0.678 PB L2
ENSG00000112306 RPS12 612674 sc-eQTL 4.36e-01 -0.0443 0.0566 0.678 PB L2
ENSG00000118515 SGK1 -890869 sc-eQTL 1.52e-01 -0.131 0.0909 0.678 PB L2
ENSG00000146409 SLC18B1 613904 sc-eQTL 8.61e-01 0.0187 0.106 0.678 PB L2
ENSG00000028839 TBPL1 -524927 sc-eQTL 9.16e-01 -0.0101 0.0953 0.674 Pro_T L2
ENSG00000079950 STX7 914045 sc-eQTL 3.38e-01 0.0815 0.0849 0.674 Pro_T L2
ENSG00000112303 VNN2 663784 sc-eQTL 9.82e-01 -0.00206 0.0913 0.674 Pro_T L2
ENSG00000112306 RPS12 612674 sc-eQTL 5.79e-02 -0.0653 0.0342 0.674 Pro_T L2
ENSG00000118515 SGK1 -890869 sc-eQTL 9.63e-01 0.00324 0.0692 0.674 Pro_T L2
ENSG00000146409 SLC18B1 613904 sc-eQTL 5.96e-01 0.0474 0.0893 0.674 Pro_T L2
ENSG00000028839 TBPL1 -524927 sc-eQTL 9.28e-01 -0.00873 0.0958 0.675 Treg L2
ENSG00000079950 STX7 914045 sc-eQTL 4.75e-01 -0.0645 0.0902 0.675 Treg L2
ENSG00000112303 VNN2 663784 sc-eQTL 1.55e-01 0.108 0.0756 0.675 Treg L2
ENSG00000112306 RPS12 612674 sc-eQTL 7.19e-01 -0.0121 0.0336 0.675 Treg L2
ENSG00000118515 SGK1 -890869 sc-eQTL 4.86e-01 0.0494 0.0707 0.675 Treg L2
ENSG00000146409 SLC18B1 613904 sc-eQTL 1.29e-01 -0.144 0.0944 0.675 Treg L2
ENSG00000028839 TBPL1 -524927 sc-eQTL 6.36e-01 -0.047 0.0993 0.671 cDC L2
ENSG00000079950 STX7 914045 sc-eQTL 7.81e-01 0.0217 0.078 0.671 cDC L2
ENSG00000093134 VNN3 692478 sc-eQTL 5.54e-01 0.0459 0.0774 0.671 cDC L2
ENSG00000112299 VNN1 713188 sc-eQTL 3.22e-01 0.0902 0.0909 0.671 cDC L2
ENSG00000112303 VNN2 663784 sc-eQTL 5.54e-01 0.0525 0.0887 0.671 cDC L2
ENSG00000112306 RPS12 612674 sc-eQTL 6.04e-01 0.0227 0.0438 0.671 cDC L2
ENSG00000118515 SGK1 -890869 sc-eQTL 1.72e-01 -0.101 0.0735 0.671 cDC L2
ENSG00000146409 SLC18B1 613904 sc-eQTL 8.28e-01 -0.0189 0.0868 0.671 cDC L2
ENSG00000286438 AL591115.1 324115 sc-eQTL 2.64e-01 0.0774 0.0691 0.671 cDC L2
ENSG00000286887 AL355881.1 -869058 sc-eQTL 8.65e-01 0.0145 0.0854 0.671 cDC L2
ENSG00000028839 TBPL1 -524927 sc-eQTL 4.84e-01 0.0563 0.0802 0.675 cMono_IL1B L2
ENSG00000079950 STX7 914045 sc-eQTL 2.47e-01 0.0704 0.0607 0.675 cMono_IL1B L2
ENSG00000093134 VNN3 692478 sc-eQTL 7.95e-01 0.0224 0.086 0.675 cMono_IL1B L2
ENSG00000112299 VNN1 713188 sc-eQTL 7.12e-01 -0.0321 0.0868 0.675 cMono_IL1B L2
ENSG00000112303 VNN2 663784 sc-eQTL 3.46e-01 0.0654 0.0693 0.675 cMono_IL1B L2
ENSG00000112306 RPS12 612674 sc-eQTL 2.92e-01 -0.0406 0.0385 0.675 cMono_IL1B L2
ENSG00000118515 SGK1 -890869 sc-eQTL 4.22e-01 -0.0462 0.0574 0.675 cMono_IL1B L2
ENSG00000146409 SLC18B1 613904 sc-eQTL 4.62e-01 0.0547 0.0743 0.675 cMono_IL1B L2
ENSG00000286887 AL355881.1 -869058 sc-eQTL 3.69e-01 -0.0696 0.0773 0.675 cMono_IL1B L2
ENSG00000028839 TBPL1 -524927 sc-eQTL 7.51e-01 -0.0287 0.0905 0.675 cMono_S100A L2
ENSG00000079950 STX7 914045 sc-eQTL 1.46e-01 0.0949 0.0651 0.675 cMono_S100A L2
ENSG00000093134 VNN3 692478 sc-eQTL 6.68e-01 0.035 0.0816 0.675 cMono_S100A L2
ENSG00000112299 VNN1 713188 sc-eQTL 4.37e-01 0.069 0.0885 0.675 cMono_S100A L2
ENSG00000112303 VNN2 663784 sc-eQTL 7.16e-01 0.0211 0.0581 0.675 cMono_S100A L2
ENSG00000112306 RPS12 612674 sc-eQTL 4.29e-01 -0.0331 0.0418 0.675 cMono_S100A L2
ENSG00000118515 SGK1 -890869 sc-eQTL 3.45e-01 -0.0452 0.0477 0.675 cMono_S100A L2
ENSG00000146409 SLC18B1 613904 sc-eQTL 4.09e-01 0.0639 0.0773 0.675 cMono_S100A L2
ENSG00000286887 AL355881.1 -869058 sc-eQTL 2.36e-02 -0.171 0.0748 0.675 cMono_S100A L2
ENSG00000028839 TBPL1 -524927 sc-eQTL 5.92e-01 0.0621 0.116 0.655 gdT L2
ENSG00000079950 STX7 914045 sc-eQTL 2.71e-02 0.219 0.0979 0.655 gdT L2
ENSG00000112303 VNN2 663784 sc-eQTL 6.19e-02 -0.205 0.109 0.655 gdT L2
ENSG00000112306 RPS12 612674 sc-eQTL 5.05e-01 -0.028 0.0419 0.655 gdT L2
ENSG00000118515 SGK1 -890869 sc-eQTL 9.88e-01 0.00122 0.0792 0.655 gdT L2
ENSG00000146409 SLC18B1 613904 sc-eQTL 8.25e-01 0.024 0.108 0.655 gdT L2
ENSG00000028839 TBPL1 -524927 sc-eQTL 4.51e-01 0.0695 0.092 0.676 intMono L2
ENSG00000079950 STX7 914045 sc-eQTL 8.96e-01 0.0115 0.088 0.676 intMono L2
ENSG00000093134 VNN3 692478 sc-eQTL 6.09e-01 0.0455 0.0888 0.676 intMono L2
ENSG00000112299 VNN1 713188 sc-eQTL 3.29e-01 0.0858 0.0876 0.676 intMono L2
ENSG00000112303 VNN2 663784 sc-eQTL 6.04e-01 -0.0463 0.0892 0.676 intMono L2
ENSG00000112306 RPS12 612674 sc-eQTL 7.24e-02 -0.0696 0.0385 0.676 intMono L2
ENSG00000118515 SGK1 -890869 sc-eQTL 3.31e-01 -0.0634 0.0651 0.676 intMono L2
ENSG00000146409 SLC18B1 613904 sc-eQTL 5.87e-02 -0.178 0.0937 0.676 intMono L2
ENSG00000286887 AL355881.1 -869058 sc-eQTL 6.22e-01 -0.0446 0.0904 0.676 intMono L2
ENSG00000028839 TBPL1 -524927 sc-eQTL 6.62e-01 -0.0425 0.0972 0.672 ncMono L2
ENSG00000079950 STX7 914045 sc-eQTL 3.89e-01 -0.0566 0.0656 0.672 ncMono L2
ENSG00000093134 VNN3 692478 sc-eQTL 4.94e-01 0.0634 0.0927 0.672 ncMono L2
ENSG00000112299 VNN1 713188 sc-eQTL 6.54e-01 -0.0413 0.0921 0.672 ncMono L2
ENSG00000112303 VNN2 663784 sc-eQTL 6.86e-01 -0.0358 0.0885 0.672 ncMono L2
ENSG00000112306 RPS12 612674 sc-eQTL 9.37e-01 0.00354 0.0444 0.672 ncMono L2
ENSG00000118515 SGK1 -890869 sc-eQTL 7.24e-01 0.0222 0.0628 0.672 ncMono L2
ENSG00000146409 SLC18B1 613904 sc-eQTL 5.89e-01 0.0425 0.0784 0.672 ncMono L2
ENSG00000286887 AL355881.1 -869058 sc-eQTL 5.83e-01 0.0456 0.0829 0.672 ncMono L2
ENSG00000028839 TBPL1 -524927 sc-eQTL 6.25e-01 -0.0521 0.106 0.669 pDC L2
ENSG00000079950 STX7 914045 sc-eQTL 2.78e-01 0.0768 0.0705 0.669 pDC L2
ENSG00000093134 VNN3 692478 sc-eQTL 6.67e-01 -0.0307 0.0712 0.669 pDC L2
ENSG00000112299 VNN1 713188 sc-eQTL 6.35e-02 0.134 0.0717 0.669 pDC L2
ENSG00000112303 VNN2 663784 sc-eQTL 4.48e-01 0.0655 0.0861 0.669 pDC L2
ENSG00000112306 RPS12 612674 sc-eQTL 3.82e-01 -0.052 0.0593 0.669 pDC L2
ENSG00000118515 SGK1 -890869 sc-eQTL 5.94e-01 0.0323 0.0603 0.669 pDC L2
ENSG00000146409 SLC18B1 613904 sc-eQTL 5.75e-03 -0.24 0.0858 0.669 pDC L2
ENSG00000286438 AL591115.1 324115 sc-eQTL 3.60e-01 0.0771 0.084 0.669 pDC L2
ENSG00000286887 AL355881.1 -869058 sc-eQTL 6.11e-01 0.038 0.0746 0.669 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -524927 sc-eQTL 2.87e-01 0.1 0.0939 0.675 B_Memory LOneK1K
ENSG00000079950 STX7 914045 sc-eQTL 2.43e-03 0.156 0.0507 0.675 B_Memory LOneK1K
ENSG00000112303 VNN2 663784 sc-eQTL 1.39e-01 0.121 0.0815 0.675 B_Memory LOneK1K
ENSG00000112306 RPS12 612674 sc-eQTL 7.32e-01 0.016 0.0467 0.675 B_Memory LOneK1K
ENSG00000118515 SGK1 -890869 sc-eQTL 6.50e-02 -0.134 0.0724 0.675 B_Memory LOneK1K
ENSG00000146409 SLC18B1 613904 sc-eQTL 5.71e-01 0.0486 0.0856 0.675 B_Memory LOneK1K
ENSG00000028839 TBPL1 -524927 sc-eQTL 8.25e-01 -0.0201 0.0908 0.675 B_Naive LOneK1K
ENSG00000079950 STX7 914045 sc-eQTL 1.90e-01 0.0536 0.0407 0.675 B_Naive LOneK1K
ENSG00000112303 VNN2 663784 sc-eQTL 8.72e-01 -0.0128 0.0794 0.675 B_Naive LOneK1K
ENSG00000112306 RPS12 612674 sc-eQTL 6.18e-01 0.024 0.048 0.675 B_Naive LOneK1K
ENSG00000118515 SGK1 -890869 sc-eQTL 3.04e-01 -0.0765 0.0742 0.675 B_Naive LOneK1K
ENSG00000146409 SLC18B1 613904 sc-eQTL 7.02e-01 0.0347 0.0906 0.675 B_Naive LOneK1K
ENSG00000028839 TBPL1 -524927 sc-eQTL 9.98e-01 -0.00022 0.0733 0.675 CD14_Mono LOneK1K
ENSG00000079950 STX7 914045 sc-eQTL 8.90e-02 0.0865 0.0506 0.675 CD14_Mono LOneK1K
ENSG00000093134 VNN3 692478 sc-eQTL 9.70e-01 0.00314 0.083 0.675 CD14_Mono LOneK1K
ENSG00000112299 VNN1 713188 sc-eQTL 8.45e-01 0.0169 0.0866 0.675 CD14_Mono LOneK1K
ENSG00000112303 VNN2 663784 sc-eQTL 6.84e-01 0.0233 0.0572 0.675 CD14_Mono LOneK1K
ENSG00000112306 RPS12 612674 sc-eQTL 2.12e-01 -0.0489 0.0391 0.675 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -890869 sc-eQTL 2.48e-01 -0.0618 0.0533 0.675 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 613904 sc-eQTL 4.03e-01 0.0585 0.0698 0.675 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -869058 sc-eQTL 8.19e-02 -0.127 0.0728 0.675 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -524927 sc-eQTL 5.56e-01 0.0553 0.0937 0.677 CD16_Mono LOneK1K
ENSG00000079950 STX7 914045 sc-eQTL 4.34e-01 -0.0484 0.0618 0.677 CD16_Mono LOneK1K
ENSG00000093134 VNN3 692478 sc-eQTL 2.78e-01 0.0987 0.0907 0.677 CD16_Mono LOneK1K
ENSG00000112299 VNN1 713188 sc-eQTL 7.45e-01 0.0294 0.0901 0.677 CD16_Mono LOneK1K
ENSG00000112303 VNN2 663784 sc-eQTL 9.62e-01 -0.0041 0.085 0.677 CD16_Mono LOneK1K
ENSG00000112306 RPS12 612674 sc-eQTL 8.48e-01 -0.00694 0.0361 0.677 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -890869 sc-eQTL 7.77e-01 -0.0155 0.0546 0.677 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 613904 sc-eQTL 8.45e-02 -0.151 0.0869 0.677 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -869058 sc-eQTL 4.48e-01 -0.0601 0.0791 0.677 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -524927 sc-eQTL 8.42e-01 0.0153 0.0766 0.677 NK_CD56dim LOneK1K
ENSG00000079950 STX7 914045 sc-eQTL 8.50e-02 0.124 0.0714 0.677 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 663784 sc-eQTL 8.07e-01 -0.0222 0.091 0.677 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 612674 sc-eQTL 3.84e-01 -0.0324 0.0371 0.677 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -890869 sc-eQTL 7.36e-02 -0.137 0.0762 0.677 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000112299 VNN1 713188 pQTL 0.00449 0.103 0.0361 0.0 0.0 0.322

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina