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Genes within 1Mb (chr6:133411770:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -540400 sc-eQTL 2.84e-02 -0.32 0.145 0.9 B L1
ENSG00000079950 STX7 898572 sc-eQTL 1.25e-01 0.0896 0.0581 0.9 B L1
ENSG00000112303 VNN2 648311 sc-eQTL 7.03e-01 -0.0419 0.11 0.9 B L1
ENSG00000112306 RPS12 597201 sc-eQTL 7.57e-01 0.0206 0.0664 0.9 B L1
ENSG00000118515 SGK1 -906342 sc-eQTL 8.47e-01 -0.0198 0.102 0.9 B L1
ENSG00000146409 SLC18B1 598431 sc-eQTL 1.99e-01 -0.179 0.139 0.9 B L1
ENSG00000028839 TBPL1 -540400 sc-eQTL 3.37e-01 -0.104 0.108 0.9 CD4T L1
ENSG00000079950 STX7 898572 sc-eQTL 2.97e-01 -0.118 0.113 0.9 CD4T L1
ENSG00000112303 VNN2 648311 sc-eQTL 7.56e-01 -0.0305 0.0979 0.9 CD4T L1
ENSG00000112306 RPS12 597201 sc-eQTL 8.09e-01 0.0161 0.0666 0.9 CD4T L1
ENSG00000118515 SGK1 -906342 sc-eQTL 8.47e-01 0.0173 0.0895 0.9 CD4T L1
ENSG00000146409 SLC18B1 598431 sc-eQTL 4.08e-02 -0.274 0.133 0.9 CD4T L1
ENSG00000028839 TBPL1 -540400 sc-eQTL 2.28e-01 -0.129 0.107 0.9 CD8T L1
ENSG00000079950 STX7 898572 sc-eQTL 8.93e-01 -0.0151 0.112 0.9 CD8T L1
ENSG00000112303 VNN2 648311 sc-eQTL 2.27e-02 -0.297 0.129 0.9 CD8T L1
ENSG00000112306 RPS12 597201 sc-eQTL 6.11e-01 0.0228 0.0447 0.9 CD8T L1
ENSG00000118515 SGK1 -906342 sc-eQTL 5.88e-01 -0.0374 0.0689 0.9 CD8T L1
ENSG00000146409 SLC18B1 598431 sc-eQTL 4.82e-01 -0.0951 0.135 0.9 CD8T L1
ENSG00000028839 TBPL1 -540400 sc-eQTL 6.67e-01 -0.0707 0.164 0.899 DC L1
ENSG00000079950 STX7 898572 sc-eQTL 3.95e-01 -0.0869 0.102 0.899 DC L1
ENSG00000093134 VNN3 677005 sc-eQTL 8.85e-01 -0.0183 0.127 0.899 DC L1
ENSG00000112299 VNN1 697715 sc-eQTL 5.73e-01 0.077 0.137 0.899 DC L1
ENSG00000112303 VNN2 648311 sc-eQTL 1.38e-01 -0.216 0.145 0.899 DC L1
ENSG00000112306 RPS12 597201 sc-eQTL 6.42e-01 -0.0381 0.0819 0.899 DC L1
ENSG00000118515 SGK1 -906342 sc-eQTL 2.18e-01 -0.117 0.0948 0.899 DC L1
ENSG00000146409 SLC18B1 598431 sc-eQTL 1.53e-01 -0.185 0.129 0.899 DC L1
ENSG00000286438 AL591115.1 308642 sc-eQTL 3.22e-01 0.117 0.118 0.899 DC L1
ENSG00000286887 AL355881.1 -884531 sc-eQTL 9.13e-01 0.0162 0.147 0.899 DC L1
ENSG00000028839 TBPL1 -540400 sc-eQTL 4.25e-01 0.092 0.115 0.9 Mono L1
ENSG00000079950 STX7 898572 sc-eQTL 6.31e-01 0.0371 0.077 0.9 Mono L1
ENSG00000093134 VNN3 677005 sc-eQTL 6.48e-01 0.0604 0.132 0.9 Mono L1
ENSG00000112299 VNN1 697715 sc-eQTL 7.62e-01 0.0432 0.142 0.9 Mono L1
ENSG00000112303 VNN2 648311 sc-eQTL 2.77e-02 -0.22 0.0993 0.9 Mono L1
ENSG00000112306 RPS12 597201 sc-eQTL 4.39e-01 -0.0466 0.0601 0.9 Mono L1
ENSG00000118515 SGK1 -906342 sc-eQTL 4.83e-01 -0.0597 0.0849 0.9 Mono L1
ENSG00000146409 SLC18B1 598431 sc-eQTL 5.31e-01 -0.0747 0.119 0.9 Mono L1
ENSG00000286887 AL355881.1 -884531 sc-eQTL 1.05e-01 -0.189 0.116 0.9 Mono L1
ENSG00000028839 TBPL1 -540400 sc-eQTL 4.24e-01 0.102 0.128 0.899 NK L1
ENSG00000079950 STX7 898572 sc-eQTL 4.12e-01 0.0973 0.118 0.899 NK L1
ENSG00000112303 VNN2 648311 sc-eQTL 3.25e-01 -0.145 0.147 0.899 NK L1
ENSG00000112306 RPS12 597201 sc-eQTL 2.44e-01 -0.0711 0.0608 0.899 NK L1
ENSG00000118515 SGK1 -906342 sc-eQTL 2.83e-01 -0.121 0.113 0.899 NK L1
ENSG00000028839 TBPL1 -540400 sc-eQTL 8.26e-01 -0.0324 0.147 0.9 Other_T L1
ENSG00000079950 STX7 898572 sc-eQTL 8.75e-01 -0.0182 0.115 0.9 Other_T L1
ENSG00000112303 VNN2 648311 sc-eQTL 1.04e-01 -0.226 0.139 0.9 Other_T L1
ENSG00000112306 RPS12 597201 sc-eQTL 3.69e-01 -0.0498 0.0552 0.9 Other_T L1
ENSG00000118515 SGK1 -906342 sc-eQTL 7.21e-01 -0.0364 0.102 0.9 Other_T L1
ENSG00000146409 SLC18B1 598431 sc-eQTL 2.16e-03 -0.46 0.148 0.9 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -540400 sc-eQTL 6.80e-01 0.0737 0.178 0.906 B_Activated L2
ENSG00000079950 STX7 898572 sc-eQTL 7.81e-01 -0.0425 0.153 0.906 B_Activated L2
ENSG00000112303 VNN2 648311 sc-eQTL 5.60e-01 0.0949 0.163 0.906 B_Activated L2
ENSG00000112306 RPS12 597201 sc-eQTL 4.46e-01 0.0665 0.087 0.906 B_Activated L2
ENSG00000118515 SGK1 -906342 sc-eQTL 5.90e-01 0.0839 0.155 0.906 B_Activated L2
ENSG00000146409 SLC18B1 598431 sc-eQTL 8.69e-01 0.0252 0.153 0.906 B_Activated L2
ENSG00000028839 TBPL1 -540400 sc-eQTL 7.19e-01 0.0589 0.163 0.899 B_Intermediate L2
ENSG00000079950 STX7 898572 sc-eQTL 6.27e-01 0.0457 0.0937 0.899 B_Intermediate L2
ENSG00000112303 VNN2 648311 sc-eQTL 2.32e-01 0.169 0.141 0.899 B_Intermediate L2
ENSG00000112306 RPS12 597201 sc-eQTL 5.20e-01 0.0556 0.0864 0.899 B_Intermediate L2
ENSG00000118515 SGK1 -906342 sc-eQTL 6.45e-02 -0.276 0.148 0.899 B_Intermediate L2
ENSG00000146409 SLC18B1 598431 sc-eQTL 4.16e-01 -0.127 0.156 0.899 B_Intermediate L2
ENSG00000028839 TBPL1 -540400 sc-eQTL 8.44e-01 -0.0307 0.156 0.899 B_Memory L2
ENSG00000079950 STX7 898572 sc-eQTL 5.84e-03 0.308 0.111 0.899 B_Memory L2
ENSG00000112303 VNN2 648311 sc-eQTL 6.46e-01 -0.0678 0.147 0.899 B_Memory L2
ENSG00000112306 RPS12 597201 sc-eQTL 8.58e-01 -0.0127 0.071 0.899 B_Memory L2
ENSG00000118515 SGK1 -906342 sc-eQTL 8.37e-01 -0.0268 0.13 0.899 B_Memory L2
ENSG00000146409 SLC18B1 598431 sc-eQTL 2.17e-01 -0.183 0.148 0.899 B_Memory L2
ENSG00000028839 TBPL1 -540400 sc-eQTL 3.15e-02 -0.315 0.146 0.9 B_Naive1 L2
ENSG00000079950 STX7 898572 sc-eQTL 1.49e-01 0.102 0.0704 0.9 B_Naive1 L2
ENSG00000112303 VNN2 648311 sc-eQTL 4.36e-01 -0.107 0.137 0.9 B_Naive1 L2
ENSG00000112306 RPS12 597201 sc-eQTL 9.02e-01 0.0096 0.0782 0.9 B_Naive1 L2
ENSG00000118515 SGK1 -906342 sc-eQTL 4.15e-01 0.0997 0.122 0.9 B_Naive1 L2
ENSG00000146409 SLC18B1 598431 sc-eQTL 6.52e-01 -0.0681 0.151 0.9 B_Naive1 L2
ENSG00000028839 TBPL1 -540400 sc-eQTL 2.31e-02 -0.355 0.155 0.899 B_Naive2 L2
ENSG00000079950 STX7 898572 sc-eQTL 3.17e-01 0.0835 0.0833 0.899 B_Naive2 L2
ENSG00000112303 VNN2 648311 sc-eQTL 4.56e-01 0.114 0.153 0.899 B_Naive2 L2
ENSG00000112306 RPS12 597201 sc-eQTL 2.55e-01 0.0923 0.0809 0.899 B_Naive2 L2
ENSG00000118515 SGK1 -906342 sc-eQTL 1.50e-01 0.206 0.143 0.899 B_Naive2 L2
ENSG00000146409 SLC18B1 598431 sc-eQTL 5.37e-02 -0.298 0.153 0.899 B_Naive2 L2
ENSG00000028839 TBPL1 -540400 sc-eQTL 8.24e-01 0.0336 0.151 0.895 CD4_CTL L2
ENSG00000079950 STX7 898572 sc-eQTL 3.90e-01 -0.129 0.149 0.895 CD4_CTL L2
ENSG00000112303 VNN2 648311 sc-eQTL 8.00e-01 -0.0384 0.151 0.895 CD4_CTL L2
ENSG00000112306 RPS12 597201 sc-eQTL 2.33e-01 0.0832 0.0695 0.895 CD4_CTL L2
ENSG00000118515 SGK1 -906342 sc-eQTL 2.29e-01 -0.145 0.121 0.895 CD4_CTL L2
ENSG00000146409 SLC18B1 598431 sc-eQTL 5.01e-01 0.0946 0.14 0.895 CD4_CTL L2
ENSG00000028839 TBPL1 -540400 sc-eQTL 9.99e-02 -0.204 0.123 0.9 CD4_Naive L2
ENSG00000079950 STX7 898572 sc-eQTL 2.08e-01 -0.153 0.121 0.9 CD4_Naive L2
ENSG00000112303 VNN2 648311 sc-eQTL 6.65e-01 -0.0488 0.113 0.9 CD4_Naive L2
ENSG00000112306 RPS12 597201 sc-eQTL 6.68e-01 0.0314 0.0731 0.9 CD4_Naive L2
ENSG00000118515 SGK1 -906342 sc-eQTL 8.21e-01 0.0203 0.0895 0.9 CD4_Naive L2
ENSG00000146409 SLC18B1 598431 sc-eQTL 7.08e-02 -0.254 0.14 0.9 CD4_Naive L2
ENSG00000028839 TBPL1 -540400 sc-eQTL 7.65e-01 0.0398 0.133 0.9 CD4_TCM L2
ENSG00000079950 STX7 898572 sc-eQTL 9.50e-01 0.00846 0.134 0.9 CD4_TCM L2
ENSG00000112303 VNN2 648311 sc-eQTL 9.85e-01 0.00244 0.132 0.9 CD4_TCM L2
ENSG00000112306 RPS12 597201 sc-eQTL 7.66e-01 -0.0204 0.0683 0.9 CD4_TCM L2
ENSG00000118515 SGK1 -906342 sc-eQTL 8.34e-01 -0.0201 0.0955 0.9 CD4_TCM L2
ENSG00000146409 SLC18B1 598431 sc-eQTL 2.45e-01 -0.184 0.158 0.9 CD4_TCM L2
ENSG00000028839 TBPL1 -540400 sc-eQTL 1.29e-01 0.235 0.154 0.9 CD4_TEM L2
ENSG00000079950 STX7 898572 sc-eQTL 5.39e-01 0.0952 0.155 0.9 CD4_TEM L2
ENSG00000112303 VNN2 648311 sc-eQTL 9.08e-01 0.0172 0.149 0.9 CD4_TEM L2
ENSG00000112306 RPS12 597201 sc-eQTL 7.18e-01 -0.0221 0.061 0.9 CD4_TEM L2
ENSG00000118515 SGK1 -906342 sc-eQTL 3.33e-01 -0.102 0.105 0.9 CD4_TEM L2
ENSG00000146409 SLC18B1 598431 sc-eQTL 4.77e-01 -0.108 0.151 0.9 CD4_TEM L2
ENSG00000028839 TBPL1 -540400 sc-eQTL 3.28e-01 0.133 0.136 0.9 CD8_CTL L2
ENSG00000079950 STX7 898572 sc-eQTL 2.83e-01 0.137 0.127 0.9 CD8_CTL L2
ENSG00000112303 VNN2 648311 sc-eQTL 1.78e-01 -0.195 0.144 0.9 CD8_CTL L2
ENSG00000112306 RPS12 597201 sc-eQTL 9.23e-01 -0.00754 0.0776 0.9 CD8_CTL L2
ENSG00000118515 SGK1 -906342 sc-eQTL 7.29e-01 -0.0455 0.131 0.9 CD8_CTL L2
ENSG00000146409 SLC18B1 598431 sc-eQTL 1.37e-01 -0.223 0.15 0.9 CD8_CTL L2
ENSG00000028839 TBPL1 -540400 sc-eQTL 4.07e-02 -0.294 0.143 0.9 CD8_Naive L2
ENSG00000079950 STX7 898572 sc-eQTL 8.86e-01 -0.022 0.154 0.9 CD8_Naive L2
ENSG00000112303 VNN2 648311 sc-eQTL 1.83e-02 -0.312 0.131 0.9 CD8_Naive L2
ENSG00000112306 RPS12 597201 sc-eQTL 5.08e-01 0.0504 0.0759 0.9 CD8_Naive L2
ENSG00000118515 SGK1 -906342 sc-eQTL 9.30e-01 0.00843 0.0954 0.9 CD8_Naive L2
ENSG00000146409 SLC18B1 598431 sc-eQTL 8.01e-01 -0.0385 0.153 0.9 CD8_Naive L2
ENSG00000028839 TBPL1 -540400 sc-eQTL 1.20e-01 -0.252 0.162 0.898 CD8_TCM L2
ENSG00000079950 STX7 898572 sc-eQTL 6.50e-01 0.0685 0.151 0.898 CD8_TCM L2
ENSG00000112303 VNN2 648311 sc-eQTL 6.95e-01 0.0587 0.149 0.898 CD8_TCM L2
ENSG00000112306 RPS12 597201 sc-eQTL 9.39e-01 -0.00561 0.0729 0.898 CD8_TCM L2
ENSG00000118515 SGK1 -906342 sc-eQTL 7.45e-01 -0.0393 0.121 0.898 CD8_TCM L2
ENSG00000146409 SLC18B1 598431 sc-eQTL 1.23e-01 -0.246 0.159 0.898 CD8_TCM L2
ENSG00000028839 TBPL1 -540400 sc-eQTL 3.23e-01 -0.145 0.147 0.895 CD8_TEM L2
ENSG00000079950 STX7 898572 sc-eQTL 9.21e-01 0.0159 0.16 0.895 CD8_TEM L2
ENSG00000112303 VNN2 648311 sc-eQTL 7.26e-01 -0.0559 0.16 0.895 CD8_TEM L2
ENSG00000112306 RPS12 597201 sc-eQTL 2.66e-01 -0.0955 0.0856 0.895 CD8_TEM L2
ENSG00000118515 SGK1 -906342 sc-eQTL 2.53e-01 -0.161 0.14 0.895 CD8_TEM L2
ENSG00000146409 SLC18B1 598431 sc-eQTL 4.83e-01 0.114 0.162 0.895 CD8_TEM L2
ENSG00000028839 TBPL1 -540400 sc-eQTL 3.49e-01 -0.144 0.154 0.898 MAIT L2
ENSG00000079950 STX7 898572 sc-eQTL 2.78e-01 -0.159 0.146 0.898 MAIT L2
ENSG00000112303 VNN2 648311 sc-eQTL 5.59e-01 -0.0871 0.149 0.898 MAIT L2
ENSG00000112306 RPS12 597201 sc-eQTL 2.14e-01 -0.091 0.073 0.898 MAIT L2
ENSG00000118515 SGK1 -906342 sc-eQTL 3.68e-01 -0.0929 0.103 0.898 MAIT L2
ENSG00000146409 SLC18B1 598431 sc-eQTL 2.94e-03 -0.453 0.15 0.898 MAIT L2
ENSG00000028839 TBPL1 -540400 sc-eQTL 5.20e-01 0.105 0.163 0.896 NK_CD56bright L2
ENSG00000079950 STX7 898572 sc-eQTL 4.43e-01 -0.116 0.151 0.896 NK_CD56bright L2
ENSG00000112303 VNN2 648311 sc-eQTL 3.83e-01 -0.134 0.154 0.896 NK_CD56bright L2
ENSG00000112306 RPS12 597201 sc-eQTL 1.10e-02 -0.217 0.0844 0.896 NK_CD56bright L2
ENSG00000118515 SGK1 -906342 sc-eQTL 6.96e-01 0.0501 0.128 0.896 NK_CD56bright L2
ENSG00000028839 TBPL1 -540400 sc-eQTL 1.44e-01 0.2 0.136 0.899 NK_CD56dim L2
ENSG00000079950 STX7 898572 sc-eQTL 2.11e-01 0.157 0.125 0.899 NK_CD56dim L2
ENSG00000112303 VNN2 648311 sc-eQTL 7.45e-01 -0.0511 0.157 0.899 NK_CD56dim L2
ENSG00000112306 RPS12 597201 sc-eQTL 2.92e-01 -0.0656 0.0622 0.899 NK_CD56dim L2
ENSG00000118515 SGK1 -906342 sc-eQTL 2.00e-01 -0.177 0.138 0.899 NK_CD56dim L2
ENSG00000028839 TBPL1 -540400 sc-eQTL 9.07e-01 0.0197 0.169 0.9 NK_HLA L2
ENSG00000079950 STX7 898572 sc-eQTL 7.42e-01 -0.0507 0.154 0.9 NK_HLA L2
ENSG00000112303 VNN2 648311 sc-eQTL 5.00e-01 -0.105 0.155 0.9 NK_HLA L2
ENSG00000112306 RPS12 597201 sc-eQTL 2.98e-01 -0.0755 0.0723 0.9 NK_HLA L2
ENSG00000118515 SGK1 -906342 sc-eQTL 6.43e-02 -0.264 0.142 0.9 NK_HLA L2
ENSG00000028839 TBPL1 -540400 sc-eQTL 6.94e-01 -0.0562 0.143 0.899 NK_cytokine L2
ENSG00000079950 STX7 898572 sc-eQTL 7.20e-01 0.0496 0.138 0.899 NK_cytokine L2
ENSG00000112303 VNN2 648311 sc-eQTL 2.73e-01 -0.171 0.155 0.899 NK_cytokine L2
ENSG00000112306 RPS12 597201 sc-eQTL 1.60e-01 -0.119 0.084 0.899 NK_cytokine L2
ENSG00000118515 SGK1 -906342 sc-eQTL 5.38e-01 -0.0866 0.14 0.899 NK_cytokine L2
ENSG00000028839 TBPL1 -540400 sc-eQTL 8.03e-01 -0.0519 0.208 0.907 PB L2
ENSG00000079950 STX7 898572 sc-eQTL 9.25e-01 -0.0139 0.148 0.907 PB L2
ENSG00000112303 VNN2 648311 sc-eQTL 3.39e-01 -0.173 0.18 0.907 PB L2
ENSG00000112306 RPS12 597201 sc-eQTL 7.81e-01 -0.0286 0.103 0.907 PB L2
ENSG00000118515 SGK1 -906342 sc-eQTL 3.36e-01 -0.16 0.165 0.907 PB L2
ENSG00000146409 SLC18B1 598431 sc-eQTL 9.13e-01 -0.0212 0.192 0.907 PB L2
ENSG00000028839 TBPL1 -540400 sc-eQTL 3.45e-01 0.147 0.155 0.9 Pro_T L2
ENSG00000079950 STX7 898572 sc-eQTL 6.06e-01 0.0716 0.139 0.9 Pro_T L2
ENSG00000112303 VNN2 648311 sc-eQTL 8.64e-01 0.0255 0.149 0.9 Pro_T L2
ENSG00000112306 RPS12 597201 sc-eQTL 1.13e-01 -0.0891 0.0559 0.9 Pro_T L2
ENSG00000118515 SGK1 -906342 sc-eQTL 2.34e-01 0.134 0.112 0.9 Pro_T L2
ENSG00000146409 SLC18B1 598431 sc-eQTL 7.01e-01 0.0559 0.146 0.9 Pro_T L2
ENSG00000028839 TBPL1 -540400 sc-eQTL 4.93e-01 -0.108 0.157 0.9 Treg L2
ENSG00000079950 STX7 898572 sc-eQTL 2.66e-01 -0.164 0.147 0.9 Treg L2
ENSG00000112303 VNN2 648311 sc-eQTL 4.99e-01 0.0843 0.124 0.9 Treg L2
ENSG00000112306 RPS12 597201 sc-eQTL 5.27e-01 -0.0349 0.055 0.9 Treg L2
ENSG00000118515 SGK1 -906342 sc-eQTL 2.94e-01 0.122 0.116 0.9 Treg L2
ENSG00000146409 SLC18B1 598431 sc-eQTL 1.26e-01 -0.238 0.155 0.9 Treg L2
ENSG00000028839 TBPL1 -540400 sc-eQTL 2.70e-01 -0.181 0.164 0.895 cDC L2
ENSG00000079950 STX7 898572 sc-eQTL 8.87e-01 -0.0183 0.129 0.895 cDC L2
ENSG00000093134 VNN3 677005 sc-eQTL 8.64e-01 0.022 0.128 0.895 cDC L2
ENSG00000112299 VNN1 697715 sc-eQTL 6.45e-01 0.0695 0.151 0.895 cDC L2
ENSG00000112303 VNN2 648311 sc-eQTL 1.12e-01 -0.233 0.146 0.895 cDC L2
ENSG00000112306 RPS12 597201 sc-eQTL 9.33e-01 -0.0061 0.0724 0.895 cDC L2
ENSG00000118515 SGK1 -906342 sc-eQTL 6.06e-02 -0.228 0.121 0.895 cDC L2
ENSG00000146409 SLC18B1 598431 sc-eQTL 4.18e-01 -0.116 0.143 0.895 cDC L2
ENSG00000286438 AL591115.1 308642 sc-eQTL 9.86e-01 -0.00209 0.115 0.895 cDC L2
ENSG00000286887 AL355881.1 -884531 sc-eQTL 4.59e-01 0.105 0.141 0.895 cDC L2
ENSG00000028839 TBPL1 -540400 sc-eQTL 8.66e-01 0.022 0.131 0.9 cMono_IL1B L2
ENSG00000079950 STX7 898572 sc-eQTL 9.45e-01 -0.0068 0.0993 0.9 cMono_IL1B L2
ENSG00000093134 VNN3 677005 sc-eQTL 4.94e-01 0.0959 0.14 0.9 cMono_IL1B L2
ENSG00000112299 VNN1 697715 sc-eQTL 6.06e-01 -0.0731 0.141 0.9 cMono_IL1B L2
ENSG00000112303 VNN2 648311 sc-eQTL 2.41e-01 -0.133 0.113 0.9 cMono_IL1B L2
ENSG00000112306 RPS12 597201 sc-eQTL 1.94e-01 -0.0816 0.0626 0.9 cMono_IL1B L2
ENSG00000118515 SGK1 -906342 sc-eQTL 3.84e-01 -0.0817 0.0936 0.9 cMono_IL1B L2
ENSG00000146409 SLC18B1 598431 sc-eQTL 8.07e-01 -0.0296 0.121 0.9 cMono_IL1B L2
ENSG00000286887 AL355881.1 -884531 sc-eQTL 5.27e-01 -0.0799 0.126 0.9 cMono_IL1B L2
ENSG00000028839 TBPL1 -540400 sc-eQTL 6.26e-01 0.0722 0.148 0.9 cMono_S100A L2
ENSG00000079950 STX7 898572 sc-eQTL 1.65e-01 0.148 0.106 0.9 cMono_S100A L2
ENSG00000093134 VNN3 677005 sc-eQTL 4.97e-01 -0.0907 0.133 0.9 cMono_S100A L2
ENSG00000112299 VNN1 697715 sc-eQTL 6.40e-01 0.0679 0.145 0.9 cMono_S100A L2
ENSG00000112303 VNN2 648311 sc-eQTL 1.45e-01 -0.138 0.0945 0.9 cMono_S100A L2
ENSG00000112306 RPS12 597201 sc-eQTL 7.26e-01 -0.024 0.0684 0.9 cMono_S100A L2
ENSG00000118515 SGK1 -906342 sc-eQTL 9.52e-01 -0.00469 0.0782 0.9 cMono_S100A L2
ENSG00000146409 SLC18B1 598431 sc-eQTL 6.53e-01 -0.0569 0.127 0.9 cMono_S100A L2
ENSG00000286887 AL355881.1 -884531 sc-eQTL 2.93e-03 -0.365 0.121 0.9 cMono_S100A L2
ENSG00000028839 TBPL1 -540400 sc-eQTL 9.44e-01 0.0137 0.194 0.894 gdT L2
ENSG00000079950 STX7 898572 sc-eQTL 2.65e-01 0.186 0.166 0.894 gdT L2
ENSG00000112303 VNN2 648311 sc-eQTL 1.15e-01 -0.29 0.183 0.894 gdT L2
ENSG00000112306 RPS12 597201 sc-eQTL 7.72e-01 -0.0204 0.0703 0.894 gdT L2
ENSG00000118515 SGK1 -906342 sc-eQTL 3.93e-01 0.113 0.132 0.894 gdT L2
ENSG00000146409 SLC18B1 598431 sc-eQTL 5.36e-01 -0.112 0.181 0.894 gdT L2
ENSG00000028839 TBPL1 -540400 sc-eQTL 9.50e-01 -0.00942 0.151 0.898 intMono L2
ENSG00000079950 STX7 898572 sc-eQTL 8.01e-01 -0.0364 0.144 0.898 intMono L2
ENSG00000093134 VNN3 677005 sc-eQTL 7.26e-01 -0.0511 0.146 0.898 intMono L2
ENSG00000112299 VNN1 697715 sc-eQTL 2.88e-01 0.153 0.144 0.898 intMono L2
ENSG00000112303 VNN2 648311 sc-eQTL 6.53e-02 -0.269 0.145 0.898 intMono L2
ENSG00000112306 RPS12 597201 sc-eQTL 9.75e-03 -0.163 0.0626 0.898 intMono L2
ENSG00000118515 SGK1 -906342 sc-eQTL 5.69e-01 -0.061 0.107 0.898 intMono L2
ENSG00000146409 SLC18B1 598431 sc-eQTL 1.35e-02 -0.381 0.153 0.898 intMono L2
ENSG00000286887 AL355881.1 -884531 sc-eQTL 4.86e-01 -0.103 0.148 0.898 intMono L2
ENSG00000028839 TBPL1 -540400 sc-eQTL 9.67e-01 0.00647 0.158 0.898 ncMono L2
ENSG00000079950 STX7 898572 sc-eQTL 5.20e-01 -0.0689 0.107 0.898 ncMono L2
ENSG00000093134 VNN3 677005 sc-eQTL 2.56e-01 -0.172 0.15 0.898 ncMono L2
ENSG00000112299 VNN1 697715 sc-eQTL 5.47e-01 -0.0903 0.15 0.898 ncMono L2
ENSG00000112303 VNN2 648311 sc-eQTL 8.81e-04 -0.473 0.14 0.898 ncMono L2
ENSG00000112306 RPS12 597201 sc-eQTL 7.05e-01 0.0273 0.0722 0.898 ncMono L2
ENSG00000118515 SGK1 -906342 sc-eQTL 9.00e-01 0.0129 0.102 0.898 ncMono L2
ENSG00000146409 SLC18B1 598431 sc-eQTL 9.69e-01 0.00497 0.128 0.898 ncMono L2
ENSG00000286887 AL355881.1 -884531 sc-eQTL 6.00e-01 0.0709 0.135 0.898 ncMono L2
ENSG00000028839 TBPL1 -540400 sc-eQTL 7.73e-01 -0.053 0.183 0.898 pDC L2
ENSG00000079950 STX7 898572 sc-eQTL 2.17e-01 -0.151 0.121 0.898 pDC L2
ENSG00000093134 VNN3 677005 sc-eQTL 4.30e-01 -0.097 0.123 0.898 pDC L2
ENSG00000112299 VNN1 697715 sc-eQTL 9.07e-01 0.0147 0.125 0.898 pDC L2
ENSG00000112303 VNN2 648311 sc-eQTL 7.79e-01 0.0419 0.149 0.898 pDC L2
ENSG00000112306 RPS12 597201 sc-eQTL 9.64e-02 -0.17 0.102 0.898 pDC L2
ENSG00000118515 SGK1 -906342 sc-eQTL 6.57e-01 0.0463 0.104 0.898 pDC L2
ENSG00000146409 SLC18B1 598431 sc-eQTL 8.38e-02 -0.261 0.15 0.898 pDC L2
ENSG00000286438 AL591115.1 308642 sc-eQTL 2.47e-01 0.168 0.145 0.898 pDC L2
ENSG00000286887 AL355881.1 -884531 sc-eQTL 5.16e-01 0.0837 0.129 0.898 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -540400 sc-eQTL 6.75e-01 0.0657 0.157 0.9 B_Memory LOneK1K
ENSG00000079950 STX7 898572 sc-eQTL 4.51e-02 0.172 0.0854 0.9 B_Memory LOneK1K
ENSG00000112303 VNN2 648311 sc-eQTL 9.62e-01 0.00659 0.136 0.9 B_Memory LOneK1K
ENSG00000112306 RPS12 597201 sc-eQTL 6.61e-01 0.0341 0.0777 0.9 B_Memory LOneK1K
ENSG00000118515 SGK1 -906342 sc-eQTL 2.64e-01 -0.136 0.121 0.9 B_Memory LOneK1K
ENSG00000146409 SLC18B1 598431 sc-eQTL 4.15e-01 -0.116 0.142 0.9 B_Memory LOneK1K
ENSG00000028839 TBPL1 -540400 sc-eQTL 3.21e-04 -0.521 0.142 0.9 B_Naive LOneK1K
ENSG00000079950 STX7 898572 sc-eQTL 1.17e-01 0.103 0.0658 0.9 B_Naive LOneK1K
ENSG00000112303 VNN2 648311 sc-eQTL 6.34e-01 -0.0612 0.128 0.9 B_Naive LOneK1K
ENSG00000112306 RPS12 597201 sc-eQTL 7.72e-01 0.0225 0.0777 0.9 B_Naive LOneK1K
ENSG00000118515 SGK1 -906342 sc-eQTL 4.95e-01 0.0821 0.12 0.9 B_Naive LOneK1K
ENSG00000146409 SLC18B1 598431 sc-eQTL 1.76e-01 -0.198 0.146 0.9 B_Naive LOneK1K
ENSG00000028839 TBPL1 -540400 sc-eQTL 5.06e-01 0.079 0.119 0.9 CD14_Mono LOneK1K
ENSG00000079950 STX7 898572 sc-eQTL 5.27e-01 0.0523 0.0824 0.9 CD14_Mono LOneK1K
ENSG00000093134 VNN3 677005 sc-eQTL 8.96e-01 0.0176 0.134 0.9 CD14_Mono LOneK1K
ENSG00000112299 VNN1 697715 sc-eQTL 7.39e-01 0.0468 0.14 0.9 CD14_Mono LOneK1K
ENSG00000112303 VNN2 648311 sc-eQTL 9.78e-02 -0.153 0.0921 0.9 CD14_Mono LOneK1K
ENSG00000112306 RPS12 597201 sc-eQTL 2.28e-01 -0.0766 0.0634 0.9 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -906342 sc-eQTL 2.76e-01 -0.0943 0.0864 0.9 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 598431 sc-eQTL 6.80e-01 -0.0467 0.113 0.9 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -884531 sc-eQTL 4.78e-02 -0.234 0.118 0.9 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -540400 sc-eQTL 9.99e-01 0.000206 0.153 0.899 CD16_Mono LOneK1K
ENSG00000079950 STX7 898572 sc-eQTL 7.52e-01 -0.0319 0.101 0.899 CD16_Mono LOneK1K
ENSG00000093134 VNN3 677005 sc-eQTL 4.26e-01 -0.118 0.148 0.899 CD16_Mono LOneK1K
ENSG00000112299 VNN1 697715 sc-eQTL 6.84e-01 -0.0598 0.147 0.899 CD16_Mono LOneK1K
ENSG00000112303 VNN2 648311 sc-eQTL 6.59e-03 -0.373 0.136 0.899 CD16_Mono LOneK1K
ENSG00000112306 RPS12 597201 sc-eQTL 9.72e-01 0.00205 0.0587 0.899 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -906342 sc-eQTL 9.69e-01 -0.00344 0.0888 0.899 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 598431 sc-eQTL 5.21e-02 -0.276 0.141 0.899 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -884531 sc-eQTL 6.01e-01 -0.0674 0.129 0.899 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -540400 sc-eQTL 3.30e-01 0.123 0.126 0.899 NK_CD56dim LOneK1K
ENSG00000079950 STX7 898572 sc-eQTL 4.02e-01 0.0995 0.119 0.899 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 648311 sc-eQTL 4.18e-01 -0.122 0.15 0.899 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 597201 sc-eQTL 4.15e-01 -0.05 0.0612 0.899 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -906342 sc-eQTL 1.49e-01 -0.183 0.126 0.899 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079950 STX7 898572 pQTL 0.0198 -0.0836 0.0358 0.0 0.0 0.102
ENSG00000118515 SGK1 -906342 eQTL 0.0636 0.0651 0.0351 0.00104 0.0 0.109
ENSG00000146409 SLC18B1 598431 eQTL 0.00769 -0.0897 0.0336 0.0 0.0 0.109

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina