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Genes within 1Mb (chr6:133407620:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -544550 sc-eQTL 7.35e-02 -0.267 0.148 0.902 B L1
ENSG00000079950 STX7 894422 sc-eQTL 1.29e-01 0.0903 0.0592 0.902 B L1
ENSG00000112303 VNN2 644161 sc-eQTL 1.81e-01 -0.15 0.111 0.902 B L1
ENSG00000112306 RPS12 593051 sc-eQTL 1.58e-01 0.0955 0.0674 0.902 B L1
ENSG00000118515 SGK1 -910492 sc-eQTL 3.87e-01 -0.0904 0.104 0.902 B L1
ENSG00000146409 SLC18B1 594281 sc-eQTL 7.25e-01 -0.0501 0.142 0.902 B L1
ENSG00000028839 TBPL1 -544550 sc-eQTL 3.63e-01 -0.0999 0.109 0.902 CD4T L1
ENSG00000079950 STX7 894422 sc-eQTL 5.94e-01 -0.0608 0.114 0.902 CD4T L1
ENSG00000112303 VNN2 644161 sc-eQTL 6.18e-01 -0.0492 0.0987 0.902 CD4T L1
ENSG00000112306 RPS12 593051 sc-eQTL 7.55e-01 0.021 0.0671 0.902 CD4T L1
ENSG00000118515 SGK1 -910492 sc-eQTL 9.06e-01 0.0107 0.0902 0.902 CD4T L1
ENSG00000146409 SLC18B1 594281 sc-eQTL 1.14e-01 -0.214 0.135 0.902 CD4T L1
ENSG00000028839 TBPL1 -544550 sc-eQTL 6.33e-02 -0.202 0.108 0.902 CD8T L1
ENSG00000079950 STX7 894422 sc-eQTL 2.07e-01 -0.143 0.113 0.902 CD8T L1
ENSG00000112303 VNN2 644161 sc-eQTL 1.64e-01 -0.185 0.132 0.902 CD8T L1
ENSG00000112306 RPS12 593051 sc-eQTL 5.04e-01 0.0303 0.0453 0.902 CD8T L1
ENSG00000118515 SGK1 -910492 sc-eQTL 3.48e-01 -0.0656 0.0697 0.902 CD8T L1
ENSG00000146409 SLC18B1 594281 sc-eQTL 7.14e-01 -0.0502 0.137 0.902 CD8T L1
ENSG00000028839 TBPL1 -544550 sc-eQTL 8.95e-01 -0.0217 0.164 0.899 DC L1
ENSG00000079950 STX7 894422 sc-eQTL 9.07e-01 -0.012 0.102 0.899 DC L1
ENSG00000093134 VNN3 672855 sc-eQTL 1.26e-01 -0.193 0.126 0.899 DC L1
ENSG00000112299 VNN1 693565 sc-eQTL 7.29e-01 -0.0474 0.137 0.899 DC L1
ENSG00000112303 VNN2 644161 sc-eQTL 2.52e-01 -0.168 0.146 0.899 DC L1
ENSG00000112306 RPS12 593051 sc-eQTL 3.75e-01 -0.0728 0.0818 0.899 DC L1
ENSG00000118515 SGK1 -910492 sc-eQTL 4.29e-02 -0.192 0.0941 0.899 DC L1
ENSG00000146409 SLC18B1 594281 sc-eQTL 2.21e-01 -0.159 0.129 0.899 DC L1
ENSG00000286438 AL591115.1 304492 sc-eQTL 4.87e-01 -0.0821 0.118 0.899 DC L1
ENSG00000286887 AL355881.1 -888681 sc-eQTL 7.28e-01 -0.0513 0.147 0.899 DC L1
ENSG00000028839 TBPL1 -544550 sc-eQTL 6.82e-01 0.047 0.115 0.902 Mono L1
ENSG00000079950 STX7 894422 sc-eQTL 2.05e-01 0.0973 0.0765 0.902 Mono L1
ENSG00000093134 VNN3 672855 sc-eQTL 8.76e-01 0.0207 0.132 0.902 Mono L1
ENSG00000112299 VNN1 693565 sc-eQTL 7.87e-01 0.0383 0.142 0.902 Mono L1
ENSG00000112303 VNN2 644161 sc-eQTL 4.62e-02 -0.199 0.0991 0.902 Mono L1
ENSG00000112306 RPS12 593051 sc-eQTL 7.68e-01 -0.0177 0.06 0.902 Mono L1
ENSG00000118515 SGK1 -910492 sc-eQTL 3.16e-01 -0.085 0.0845 0.902 Mono L1
ENSG00000146409 SLC18B1 594281 sc-eQTL 4.98e-01 -0.0804 0.119 0.902 Mono L1
ENSG00000286887 AL355881.1 -888681 sc-eQTL 8.87e-02 -0.198 0.116 0.902 Mono L1
ENSG00000028839 TBPL1 -544550 sc-eQTL 3.71e-01 0.114 0.127 0.901 NK L1
ENSG00000079950 STX7 894422 sc-eQTL 5.16e-02 0.229 0.117 0.901 NK L1
ENSG00000112303 VNN2 644161 sc-eQTL 8.55e-01 -0.0269 0.147 0.901 NK L1
ENSG00000112306 RPS12 593051 sc-eQTL 7.09e-01 -0.0227 0.0608 0.901 NK L1
ENSG00000118515 SGK1 -910492 sc-eQTL 6.35e-01 -0.0535 0.112 0.901 NK L1
ENSG00000028839 TBPL1 -544550 sc-eQTL 4.35e-01 0.117 0.149 0.902 Other_T L1
ENSG00000079950 STX7 894422 sc-eQTL 7.50e-01 -0.0375 0.118 0.902 Other_T L1
ENSG00000112303 VNN2 644161 sc-eQTL 2.81e-01 -0.153 0.142 0.902 Other_T L1
ENSG00000112306 RPS12 593051 sc-eQTL 6.32e-01 -0.027 0.0564 0.902 Other_T L1
ENSG00000118515 SGK1 -910492 sc-eQTL 6.91e-01 -0.0413 0.104 0.902 Other_T L1
ENSG00000146409 SLC18B1 594281 sc-eQTL 6.96e-02 -0.279 0.153 0.902 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -544550 sc-eQTL 6.06e-01 0.0929 0.18 0.908 B_Activated L2
ENSG00000079950 STX7 894422 sc-eQTL 8.32e-01 0.0328 0.154 0.908 B_Activated L2
ENSG00000112303 VNN2 644161 sc-eQTL 3.69e-01 0.147 0.164 0.908 B_Activated L2
ENSG00000112306 RPS12 593051 sc-eQTL 7.88e-01 0.0237 0.0879 0.908 B_Activated L2
ENSG00000118515 SGK1 -910492 sc-eQTL 8.74e-01 0.0249 0.157 0.908 B_Activated L2
ENSG00000146409 SLC18B1 594281 sc-eQTL 6.69e-01 0.066 0.154 0.908 B_Activated L2
ENSG00000028839 TBPL1 -544550 sc-eQTL 3.59e-01 0.151 0.164 0.901 B_Intermediate L2
ENSG00000079950 STX7 894422 sc-eQTL 3.26e-01 0.0929 0.0943 0.901 B_Intermediate L2
ENSG00000112303 VNN2 644161 sc-eQTL 5.84e-01 0.078 0.142 0.901 B_Intermediate L2
ENSG00000112306 RPS12 593051 sc-eQTL 1.65e-01 0.121 0.0868 0.901 B_Intermediate L2
ENSG00000118515 SGK1 -910492 sc-eQTL 1.31e-01 -0.227 0.15 0.901 B_Intermediate L2
ENSG00000146409 SLC18B1 594281 sc-eQTL 6.19e-01 -0.0781 0.157 0.901 B_Intermediate L2
ENSG00000028839 TBPL1 -544550 sc-eQTL 8.96e-01 0.0206 0.158 0.901 B_Memory L2
ENSG00000079950 STX7 894422 sc-eQTL 1.57e-03 0.358 0.112 0.901 B_Memory L2
ENSG00000112303 VNN2 644161 sc-eQTL 2.16e-01 -0.185 0.149 0.901 B_Memory L2
ENSG00000112306 RPS12 593051 sc-eQTL 7.51e-01 0.0229 0.0722 0.901 B_Memory L2
ENSG00000118515 SGK1 -910492 sc-eQTL 6.25e-01 -0.0649 0.132 0.901 B_Memory L2
ENSG00000146409 SLC18B1 594281 sc-eQTL 8.73e-01 0.0242 0.151 0.901 B_Memory L2
ENSG00000028839 TBPL1 -544550 sc-eQTL 1.62e-02 -0.357 0.147 0.902 B_Naive1 L2
ENSG00000079950 STX7 894422 sc-eQTL 1.91e-01 0.0936 0.0714 0.902 B_Naive1 L2
ENSG00000112303 VNN2 644161 sc-eQTL 9.04e-02 -0.235 0.138 0.902 B_Naive1 L2
ENSG00000112306 RPS12 593051 sc-eQTL 1.14e-01 0.125 0.0788 0.902 B_Naive1 L2
ENSG00000118515 SGK1 -910492 sc-eQTL 7.77e-01 0.0351 0.124 0.902 B_Naive1 L2
ENSG00000146409 SLC18B1 594281 sc-eQTL 9.45e-01 0.0105 0.153 0.902 B_Naive1 L2
ENSG00000028839 TBPL1 -544550 sc-eQTL 2.60e-02 -0.355 0.158 0.901 B_Naive2 L2
ENSG00000079950 STX7 894422 sc-eQTL 3.03e-01 0.0877 0.0849 0.901 B_Naive2 L2
ENSG00000112303 VNN2 644161 sc-eQTL 9.38e-01 0.0122 0.156 0.901 B_Naive2 L2
ENSG00000112306 RPS12 593051 sc-eQTL 6.22e-02 0.154 0.0821 0.901 B_Naive2 L2
ENSG00000118515 SGK1 -910492 sc-eQTL 4.97e-01 0.0994 0.146 0.901 B_Naive2 L2
ENSG00000146409 SLC18B1 594281 sc-eQTL 1.41e-01 -0.232 0.157 0.901 B_Naive2 L2
ENSG00000028839 TBPL1 -544550 sc-eQTL 9.50e-01 0.00953 0.153 0.898 CD4_CTL L2
ENSG00000079950 STX7 894422 sc-eQTL 6.69e-01 -0.065 0.152 0.898 CD4_CTL L2
ENSG00000112303 VNN2 644161 sc-eQTL 6.64e-01 -0.0666 0.153 0.898 CD4_CTL L2
ENSG00000112306 RPS12 593051 sc-eQTL 6.53e-01 0.0319 0.0708 0.898 CD4_CTL L2
ENSG00000118515 SGK1 -910492 sc-eQTL 1.88e-01 -0.162 0.122 0.898 CD4_CTL L2
ENSG00000146409 SLC18B1 594281 sc-eQTL 9.12e-01 0.0158 0.143 0.898 CD4_CTL L2
ENSG00000028839 TBPL1 -544550 sc-eQTL 1.10e-01 -0.199 0.124 0.902 CD4_Naive L2
ENSG00000079950 STX7 894422 sc-eQTL 4.89e-01 -0.0848 0.122 0.902 CD4_Naive L2
ENSG00000112303 VNN2 644161 sc-eQTL 3.70e-01 -0.102 0.113 0.902 CD4_Naive L2
ENSG00000112306 RPS12 593051 sc-eQTL 9.37e-01 0.00578 0.0735 0.902 CD4_Naive L2
ENSG00000118515 SGK1 -910492 sc-eQTL 9.75e-01 -0.00281 0.0901 0.902 CD4_Naive L2
ENSG00000146409 SLC18B1 594281 sc-eQTL 5.22e-02 -0.274 0.14 0.902 CD4_Naive L2
ENSG00000028839 TBPL1 -544550 sc-eQTL 7.66e-01 0.0397 0.133 0.902 CD4_TCM L2
ENSG00000079950 STX7 894422 sc-eQTL 7.77e-01 -0.038 0.134 0.902 CD4_TCM L2
ENSG00000112303 VNN2 644161 sc-eQTL 8.70e-01 -0.0217 0.132 0.902 CD4_TCM L2
ENSG00000112306 RPS12 593051 sc-eQTL 5.40e-01 0.042 0.0685 0.902 CD4_TCM L2
ENSG00000118515 SGK1 -910492 sc-eQTL 5.49e-01 -0.0575 0.0958 0.902 CD4_TCM L2
ENSG00000146409 SLC18B1 594281 sc-eQTL 2.90e-01 -0.168 0.158 0.902 CD4_TCM L2
ENSG00000028839 TBPL1 -544550 sc-eQTL 4.37e-01 0.121 0.155 0.902 CD4_TEM L2
ENSG00000079950 STX7 894422 sc-eQTL 3.08e-01 -0.158 0.155 0.902 CD4_TEM L2
ENSG00000112303 VNN2 644161 sc-eQTL 7.11e-01 -0.0554 0.149 0.902 CD4_TEM L2
ENSG00000112306 RPS12 593051 sc-eQTL 9.36e-01 -0.00494 0.0612 0.902 CD4_TEM L2
ENSG00000118515 SGK1 -910492 sc-eQTL 3.36e-01 -0.101 0.105 0.902 CD4_TEM L2
ENSG00000146409 SLC18B1 594281 sc-eQTL 7.38e-01 0.0509 0.152 0.902 CD4_TEM L2
ENSG00000028839 TBPL1 -544550 sc-eQTL 8.52e-01 0.0257 0.137 0.902 CD8_CTL L2
ENSG00000079950 STX7 894422 sc-eQTL 7.64e-01 -0.0386 0.128 0.902 CD8_CTL L2
ENSG00000112303 VNN2 644161 sc-eQTL 8.69e-01 -0.024 0.146 0.902 CD8_CTL L2
ENSG00000112306 RPS12 593051 sc-eQTL 9.28e-01 0.00711 0.0781 0.902 CD8_CTL L2
ENSG00000118515 SGK1 -910492 sc-eQTL 8.52e-01 -0.0246 0.132 0.902 CD8_CTL L2
ENSG00000146409 SLC18B1 594281 sc-eQTL 7.70e-02 -0.267 0.15 0.902 CD8_CTL L2
ENSG00000028839 TBPL1 -544550 sc-eQTL 7.52e-02 -0.258 0.144 0.902 CD8_Naive L2
ENSG00000079950 STX7 894422 sc-eQTL 2.65e-01 -0.173 0.154 0.902 CD8_Naive L2
ENSG00000112303 VNN2 644161 sc-eQTL 5.23e-02 -0.259 0.132 0.902 CD8_Naive L2
ENSG00000112306 RPS12 593051 sc-eQTL 1.04e-01 0.124 0.076 0.902 CD8_Naive L2
ENSG00000118515 SGK1 -910492 sc-eQTL 7.62e-01 -0.0291 0.096 0.902 CD8_Naive L2
ENSG00000146409 SLC18B1 594281 sc-eQTL 7.46e-01 -0.0497 0.154 0.902 CD8_Naive L2
ENSG00000028839 TBPL1 -544550 sc-eQTL 6.08e-02 -0.307 0.163 0.9 CD8_TCM L2
ENSG00000079950 STX7 894422 sc-eQTL 7.74e-01 0.0439 0.152 0.9 CD8_TCM L2
ENSG00000112303 VNN2 644161 sc-eQTL 8.73e-01 0.0242 0.151 0.9 CD8_TCM L2
ENSG00000112306 RPS12 593051 sc-eQTL 5.27e-01 0.0467 0.0736 0.9 CD8_TCM L2
ENSG00000118515 SGK1 -910492 sc-eQTL 3.27e-01 -0.119 0.122 0.9 CD8_TCM L2
ENSG00000146409 SLC18B1 594281 sc-eQTL 4.00e-01 -0.136 0.161 0.9 CD8_TCM L2
ENSG00000028839 TBPL1 -544550 sc-eQTL 5.33e-01 -0.0931 0.149 0.897 CD8_TEM L2
ENSG00000079950 STX7 894422 sc-eQTL 9.30e-01 0.0144 0.163 0.897 CD8_TEM L2
ENSG00000112303 VNN2 644161 sc-eQTL 5.14e-01 -0.106 0.162 0.897 CD8_TEM L2
ENSG00000112306 RPS12 593051 sc-eQTL 8.71e-01 0.0141 0.087 0.897 CD8_TEM L2
ENSG00000118515 SGK1 -910492 sc-eQTL 1.91e-01 -0.186 0.142 0.897 CD8_TEM L2
ENSG00000146409 SLC18B1 594281 sc-eQTL 5.94e-01 0.0878 0.164 0.897 CD8_TEM L2
ENSG00000028839 TBPL1 -544550 sc-eQTL 8.66e-01 -0.0261 0.154 0.9 MAIT L2
ENSG00000079950 STX7 894422 sc-eQTL 2.80e-01 -0.158 0.146 0.9 MAIT L2
ENSG00000112303 VNN2 644161 sc-eQTL 5.98e-01 -0.0786 0.149 0.9 MAIT L2
ENSG00000112306 RPS12 593051 sc-eQTL 9.85e-01 -0.00138 0.0733 0.9 MAIT L2
ENSG00000118515 SGK1 -910492 sc-eQTL 3.78e-01 -0.091 0.103 0.9 MAIT L2
ENSG00000146409 SLC18B1 594281 sc-eQTL 3.31e-02 -0.326 0.152 0.9 MAIT L2
ENSG00000028839 TBPL1 -544550 sc-eQTL 6.25e-01 0.0808 0.165 0.9 NK_CD56bright L2
ENSG00000079950 STX7 894422 sc-eQTL 7.82e-01 -0.0424 0.153 0.9 NK_CD56bright L2
ENSG00000112303 VNN2 644161 sc-eQTL 1.20e-01 -0.241 0.154 0.9 NK_CD56bright L2
ENSG00000112306 RPS12 593051 sc-eQTL 1.02e-01 -0.141 0.086 0.9 NK_CD56bright L2
ENSG00000118515 SGK1 -910492 sc-eQTL 8.52e-01 0.0242 0.129 0.9 NK_CD56bright L2
ENSG00000028839 TBPL1 -544550 sc-eQTL 9.15e-02 0.233 0.137 0.901 NK_CD56dim L2
ENSG00000079950 STX7 894422 sc-eQTL 2.41e-01 0.148 0.126 0.901 NK_CD56dim L2
ENSG00000112303 VNN2 644161 sc-eQTL 3.59e-01 0.145 0.158 0.901 NK_CD56dim L2
ENSG00000112306 RPS12 593051 sc-eQTL 8.12e-01 -0.0149 0.0628 0.901 NK_CD56dim L2
ENSG00000118515 SGK1 -910492 sc-eQTL 1.73e-01 -0.19 0.139 0.901 NK_CD56dim L2
ENSG00000028839 TBPL1 -544550 sc-eQTL 5.22e-01 0.11 0.172 0.902 NK_HLA L2
ENSG00000079950 STX7 894422 sc-eQTL 4.15e-01 0.127 0.156 0.902 NK_HLA L2
ENSG00000112303 VNN2 644161 sc-eQTL 3.53e-01 -0.147 0.158 0.902 NK_HLA L2
ENSG00000112306 RPS12 593051 sc-eQTL 2.46e-01 -0.0855 0.0734 0.902 NK_HLA L2
ENSG00000118515 SGK1 -910492 sc-eQTL 5.61e-01 -0.0847 0.146 0.902 NK_HLA L2
ENSG00000028839 TBPL1 -544550 sc-eQTL 8.28e-01 0.0315 0.144 0.901 NK_cytokine L2
ENSG00000079950 STX7 894422 sc-eQTL 6.74e-02 0.255 0.139 0.901 NK_cytokine L2
ENSG00000112303 VNN2 644161 sc-eQTL 8.01e-01 -0.0396 0.157 0.901 NK_cytokine L2
ENSG00000112306 RPS12 593051 sc-eQTL 3.14e-01 -0.0858 0.085 0.901 NK_cytokine L2
ENSG00000118515 SGK1 -910492 sc-eQTL 6.19e-01 -0.0705 0.142 0.901 NK_cytokine L2
ENSG00000028839 TBPL1 -544550 sc-eQTL 8.27e-01 -0.0457 0.208 0.915 PB L2
ENSG00000079950 STX7 894422 sc-eQTL 5.45e-01 -0.09 0.148 0.915 PB L2
ENSG00000112303 VNN2 644161 sc-eQTL 3.91e-01 -0.156 0.181 0.915 PB L2
ENSG00000112306 RPS12 593051 sc-eQTL 9.97e-01 0.000434 0.103 0.915 PB L2
ENSG00000118515 SGK1 -910492 sc-eQTL 7.45e-01 0.0541 0.166 0.915 PB L2
ENSG00000146409 SLC18B1 594281 sc-eQTL 5.16e-01 -0.125 0.193 0.915 PB L2
ENSG00000028839 TBPL1 -544550 sc-eQTL 8.37e-02 0.278 0.16 0.904 Pro_T L2
ENSG00000079950 STX7 894422 sc-eQTL 6.93e-01 0.0568 0.144 0.904 Pro_T L2
ENSG00000112303 VNN2 644161 sc-eQTL 5.72e-01 0.0873 0.154 0.904 Pro_T L2
ENSG00000112306 RPS12 593051 sc-eQTL 2.34e-01 -0.0694 0.0581 0.904 Pro_T L2
ENSG00000118515 SGK1 -910492 sc-eQTL 4.39e-01 0.0905 0.117 0.904 Pro_T L2
ENSG00000146409 SLC18B1 594281 sc-eQTL 5.63e-01 0.0873 0.151 0.904 Pro_T L2
ENSG00000028839 TBPL1 -544550 sc-eQTL 3.67e-01 -0.142 0.158 0.902 Treg L2
ENSG00000079950 STX7 894422 sc-eQTL 4.77e-01 0.106 0.149 0.902 Treg L2
ENSG00000112303 VNN2 644161 sc-eQTL 4.83e-01 0.0878 0.125 0.902 Treg L2
ENSG00000112306 RPS12 593051 sc-eQTL 7.40e-01 -0.0184 0.0554 0.902 Treg L2
ENSG00000118515 SGK1 -910492 sc-eQTL 2.78e-01 0.127 0.116 0.902 Treg L2
ENSG00000146409 SLC18B1 594281 sc-eQTL 4.02e-01 -0.131 0.156 0.902 Treg L2
ENSG00000028839 TBPL1 -544550 sc-eQTL 1.81e-01 -0.217 0.162 0.893 cDC L2
ENSG00000079950 STX7 894422 sc-eQTL 5.86e-01 0.0698 0.128 0.893 cDC L2
ENSG00000093134 VNN3 672855 sc-eQTL 3.49e-01 -0.119 0.127 0.893 cDC L2
ENSG00000112299 VNN1 693565 sc-eQTL 8.71e-01 0.0243 0.149 0.893 cDC L2
ENSG00000112303 VNN2 644161 sc-eQTL 4.73e-02 -0.287 0.144 0.893 cDC L2
ENSG00000112306 RPS12 593051 sc-eQTL 6.99e-01 0.0278 0.0718 0.893 cDC L2
ENSG00000118515 SGK1 -910492 sc-eQTL 7.76e-04 -0.401 0.117 0.893 cDC L2
ENSG00000146409 SLC18B1 594281 sc-eQTL 1.40e-01 -0.209 0.141 0.893 cDC L2
ENSG00000286438 AL591115.1 304492 sc-eQTL 1.83e-01 -0.151 0.113 0.893 cDC L2
ENSG00000286887 AL355881.1 -888681 sc-eQTL 6.47e-01 -0.0642 0.14 0.893 cDC L2
ENSG00000028839 TBPL1 -544550 sc-eQTL 9.37e-01 0.0103 0.13 0.902 cMono_IL1B L2
ENSG00000079950 STX7 894422 sc-eQTL 8.49e-01 0.0188 0.0988 0.902 cMono_IL1B L2
ENSG00000093134 VNN3 672855 sc-eQTL 9.56e-01 -0.00773 0.14 0.902 cMono_IL1B L2
ENSG00000112299 VNN1 693565 sc-eQTL 7.78e-01 -0.0397 0.141 0.902 cMono_IL1B L2
ENSG00000112303 VNN2 644161 sc-eQTL 2.92e-01 -0.119 0.112 0.902 cMono_IL1B L2
ENSG00000112306 RPS12 593051 sc-eQTL 6.53e-01 -0.0282 0.0626 0.902 cMono_IL1B L2
ENSG00000118515 SGK1 -910492 sc-eQTL 1.44e-01 -0.136 0.0929 0.902 cMono_IL1B L2
ENSG00000146409 SLC18B1 594281 sc-eQTL 7.36e-01 0.0407 0.121 0.902 cMono_IL1B L2
ENSG00000286887 AL355881.1 -888681 sc-eQTL 3.41e-01 -0.12 0.125 0.902 cMono_IL1B L2
ENSG00000028839 TBPL1 -544550 sc-eQTL 9.13e-01 0.0163 0.148 0.902 cMono_S100A L2
ENSG00000079950 STX7 894422 sc-eQTL 2.63e-02 0.237 0.106 0.902 cMono_S100A L2
ENSG00000093134 VNN3 672855 sc-eQTL 7.65e-01 0.04 0.134 0.902 cMono_S100A L2
ENSG00000112299 VNN1 693565 sc-eQTL 5.54e-01 0.0861 0.145 0.902 cMono_S100A L2
ENSG00000112303 VNN2 644161 sc-eQTL 7.08e-02 -0.172 0.0945 0.902 cMono_S100A L2
ENSG00000112306 RPS12 593051 sc-eQTL 8.98e-01 0.00881 0.0686 0.902 cMono_S100A L2
ENSG00000118515 SGK1 -910492 sc-eQTL 7.38e-01 -0.0262 0.0784 0.902 cMono_S100A L2
ENSG00000146409 SLC18B1 594281 sc-eQTL 2.58e-01 -0.144 0.127 0.902 cMono_S100A L2
ENSG00000286887 AL355881.1 -888681 sc-eQTL 3.84e-02 -0.256 0.123 0.902 cMono_S100A L2
ENSG00000028839 TBPL1 -544550 sc-eQTL 8.82e-01 0.0297 0.2 0.9 gdT L2
ENSG00000079950 STX7 894422 sc-eQTL 2.88e-01 0.183 0.172 0.9 gdT L2
ENSG00000112303 VNN2 644161 sc-eQTL 2.29e-01 -0.229 0.19 0.9 gdT L2
ENSG00000112306 RPS12 593051 sc-eQTL 7.57e-01 0.0225 0.0726 0.9 gdT L2
ENSG00000118515 SGK1 -910492 sc-eQTL 9.08e-01 0.0158 0.137 0.9 gdT L2
ENSG00000146409 SLC18B1 594281 sc-eQTL 4.44e-01 -0.144 0.187 0.9 gdT L2
ENSG00000028839 TBPL1 -544550 sc-eQTL 6.71e-01 0.0639 0.15 0.898 intMono L2
ENSG00000079950 STX7 894422 sc-eQTL 3.90e-01 0.123 0.143 0.898 intMono L2
ENSG00000093134 VNN3 672855 sc-eQTL 7.93e-01 -0.038 0.145 0.898 intMono L2
ENSG00000112299 VNN1 693565 sc-eQTL 5.01e-01 0.0964 0.143 0.898 intMono L2
ENSG00000112303 VNN2 644161 sc-eQTL 1.87e-01 -0.192 0.145 0.898 intMono L2
ENSG00000112306 RPS12 593051 sc-eQTL 7.85e-02 -0.111 0.0628 0.898 intMono L2
ENSG00000118515 SGK1 -910492 sc-eQTL 6.95e-01 -0.0417 0.106 0.898 intMono L2
ENSG00000146409 SLC18B1 594281 sc-eQTL 9.09e-03 -0.399 0.152 0.898 intMono L2
ENSG00000286887 AL355881.1 -888681 sc-eQTL 1.04e-01 -0.239 0.146 0.898 intMono L2
ENSG00000028839 TBPL1 -544550 sc-eQTL 5.11e-01 -0.105 0.159 0.9 ncMono L2
ENSG00000079950 STX7 894422 sc-eQTL 6.90e-01 -0.043 0.108 0.9 ncMono L2
ENSG00000093134 VNN3 672855 sc-eQTL 4.73e-03 -0.425 0.149 0.9 ncMono L2
ENSG00000112299 VNN1 693565 sc-eQTL 7.06e-01 -0.0569 0.151 0.9 ncMono L2
ENSG00000112303 VNN2 644161 sc-eQTL 3.05e-02 -0.312 0.143 0.9 ncMono L2
ENSG00000112306 RPS12 593051 sc-eQTL 2.78e-01 0.0789 0.0725 0.9 ncMono L2
ENSG00000118515 SGK1 -910492 sc-eQTL 5.97e-01 -0.0544 0.103 0.9 ncMono L2
ENSG00000146409 SLC18B1 594281 sc-eQTL 3.16e-01 0.129 0.128 0.9 ncMono L2
ENSG00000286887 AL355881.1 -888681 sc-eQTL 4.30e-01 0.107 0.136 0.9 ncMono L2
ENSG00000028839 TBPL1 -544550 sc-eQTL 5.66e-01 0.106 0.184 0.895 pDC L2
ENSG00000079950 STX7 894422 sc-eQTL 3.06e-01 -0.126 0.122 0.895 pDC L2
ENSG00000093134 VNN3 672855 sc-eQTL 2.68e-01 -0.137 0.123 0.895 pDC L2
ENSG00000112299 VNN1 693565 sc-eQTL 2.06e-01 -0.159 0.125 0.895 pDC L2
ENSG00000112303 VNN2 644161 sc-eQTL 3.74e-01 0.133 0.149 0.895 pDC L2
ENSG00000112306 RPS12 593051 sc-eQTL 2.76e-02 -0.226 0.102 0.895 pDC L2
ENSG00000118515 SGK1 -910492 sc-eQTL 4.96e-01 -0.0714 0.105 0.895 pDC L2
ENSG00000146409 SLC18B1 594281 sc-eQTL 2.10e-01 -0.191 0.152 0.895 pDC L2
ENSG00000286438 AL591115.1 304492 sc-eQTL 8.41e-01 -0.0293 0.146 0.895 pDC L2
ENSG00000286887 AL355881.1 -888681 sc-eQTL 6.16e-01 0.0651 0.129 0.895 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -544550 sc-eQTL 2.94e-01 0.166 0.158 0.902 B_Memory LOneK1K
ENSG00000079950 STX7 894422 sc-eQTL 6.06e-03 0.237 0.0855 0.902 B_Memory LOneK1K
ENSG00000112303 VNN2 644161 sc-eQTL 5.63e-01 -0.0798 0.138 0.902 B_Memory LOneK1K
ENSG00000112306 RPS12 593051 sc-eQTL 1.78e-01 0.106 0.0781 0.902 B_Memory LOneK1K
ENSG00000118515 SGK1 -910492 sc-eQTL 3.73e-01 -0.109 0.122 0.902 B_Memory LOneK1K
ENSG00000146409 SLC18B1 594281 sc-eQTL 9.28e-01 -0.013 0.144 0.902 B_Memory LOneK1K
ENSG00000028839 TBPL1 -544550 sc-eQTL 1.99e-04 -0.551 0.145 0.902 B_Naive LOneK1K
ENSG00000079950 STX7 894422 sc-eQTL 7.09e-02 0.122 0.0672 0.902 B_Naive LOneK1K
ENSG00000112303 VNN2 644161 sc-eQTL 1.46e-01 -0.191 0.131 0.902 B_Naive LOneK1K
ENSG00000112306 RPS12 593051 sc-eQTL 1.34e-01 0.119 0.0792 0.902 B_Naive LOneK1K
ENSG00000118515 SGK1 -910492 sc-eQTL 9.52e-01 0.00735 0.123 0.902 B_Naive LOneK1K
ENSG00000146409 SLC18B1 594281 sc-eQTL 4.09e-01 -0.124 0.15 0.902 B_Naive LOneK1K
ENSG00000028839 TBPL1 -544550 sc-eQTL 7.51e-01 0.0377 0.119 0.902 CD14_Mono LOneK1K
ENSG00000079950 STX7 894422 sc-eQTL 1.59e-01 0.116 0.0822 0.902 CD14_Mono LOneK1K
ENSG00000093134 VNN3 672855 sc-eQTL 9.89e-01 0.00186 0.135 0.902 CD14_Mono LOneK1K
ENSG00000112299 VNN1 693565 sc-eQTL 9.07e-01 0.0164 0.14 0.902 CD14_Mono LOneK1K
ENSG00000112303 VNN2 644161 sc-eQTL 1.13e-01 -0.147 0.0922 0.902 CD14_Mono LOneK1K
ENSG00000112306 RPS12 593051 sc-eQTL 5.71e-01 -0.036 0.0636 0.902 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -910492 sc-eQTL 1.93e-01 -0.113 0.0863 0.902 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 594281 sc-eQTL 6.64e-01 -0.0492 0.113 0.902 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -888681 sc-eQTL 7.00e-02 -0.215 0.118 0.902 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -544550 sc-eQTL 1.00e+00 8.04e-05 0.154 0.901 CD16_Mono LOneK1K
ENSG00000079950 STX7 894422 sc-eQTL 4.81e-01 0.0715 0.101 0.901 CD16_Mono LOneK1K
ENSG00000093134 VNN3 672855 sc-eQTL 1.07e-01 -0.24 0.148 0.901 CD16_Mono LOneK1K
ENSG00000112299 VNN1 693565 sc-eQTL 7.87e-01 -0.04 0.148 0.901 CD16_Mono LOneK1K
ENSG00000112303 VNN2 644161 sc-eQTL 1.50e-01 -0.201 0.139 0.901 CD16_Mono LOneK1K
ENSG00000112306 RPS12 593051 sc-eQTL 5.73e-01 0.0334 0.0592 0.901 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -910492 sc-eQTL 5.78e-01 -0.0498 0.0896 0.901 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 594281 sc-eQTL 8.62e-02 -0.246 0.143 0.901 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -888681 sc-eQTL 3.62e-01 -0.119 0.13 0.901 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -544550 sc-eQTL 2.01e-01 0.162 0.126 0.901 NK_CD56dim LOneK1K
ENSG00000079950 STX7 894422 sc-eQTL 3.75e-02 0.247 0.118 0.901 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 644161 sc-eQTL 8.50e-01 0.0285 0.151 0.901 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 593051 sc-eQTL 8.56e-01 -0.0112 0.0615 0.901 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -910492 sc-eQTL 2.99e-01 -0.132 0.127 0.901 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079950 STX7 894422 pQTL 0.0365 -0.085 0.0406 0.0 0.0 0.0788
ENSG00000112299 VNN1 693565 pQTL 0.0465 0.125 0.0628 0.0 0.0 0.0788
ENSG00000146409 SLC18B1 594281 eQTL 0.005 -0.108 0.0383 0.0 0.0 0.0819

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079950 STX7 894422 2.66e-07 1.08e-07 3.35e-08 1.76e-07 9.65e-08 9.13e-08 1.39e-07 5.21e-08 1.37e-07 4.24e-08 1.63e-07 7.58e-08 1.26e-07 6.21e-08 5.44e-08 7.87e-08 4.94e-08 1.06e-07 5.22e-08 3.59e-08 1.03e-07 1.31e-07 1.29e-07 4.98e-08 1.29e-07 1.13e-07 1.13e-07 8.45e-08 1.03e-07 1.09e-07 9.75e-08 3.68e-08 2.74e-08 8.21e-08 9.02e-08 4.02e-08 4.78e-08 9.26e-08 8.42e-08 3.34e-08 3.61e-08 1.37e-07 3.99e-08 1.54e-08 7.79e-08 1.72e-08 1.34e-07 4.33e-09 4.74e-08
ENSG00000118515 \N -910492 2.66e-07 1.08e-07 3.35e-08 1.76e-07 9.65e-08 9.13e-08 1.39e-07 5.21e-08 1.37e-07 4.24e-08 1.63e-07 7.58e-08 1.26e-07 6.21e-08 5.44e-08 7.87e-08 4.94e-08 1.06e-07 5.22e-08 3.59e-08 1.03e-07 1.31e-07 1.29e-07 4.99e-08 1.32e-07 1.13e-07 1.13e-07 8.45e-08 1.03e-07 1.09e-07 9.75e-08 3.71e-08 2.74e-08 8.25e-08 9.02e-08 4.07e-08 4.78e-08 9.26e-08 8.55e-08 3.59e-08 3.7e-08 1.39e-07 4.04e-08 1.14e-08 7.91e-08 1.72e-08 1.35e-07 4.33e-09 4.74e-08