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Genes within 1Mb (chr6:133407437:G:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -544733 sc-eQTL 6.67e-02 -0.159 0.0861 0.476 B L1
ENSG00000079950 STX7 894239 sc-eQTL 4.79e-01 -0.0245 0.0345 0.476 B L1
ENSG00000112303 VNN2 643978 sc-eQTL 5.28e-01 -0.041 0.0649 0.476 B L1
ENSG00000112306 RPS12 592868 sc-eQTL 7.96e-01 -0.0102 0.0393 0.476 B L1
ENSG00000118515 SGK1 -910675 sc-eQTL 6.34e-01 0.0288 0.0606 0.476 B L1
ENSG00000146409 SLC18B1 594098 sc-eQTL 2.29e-01 0.0993 0.0824 0.476 B L1
ENSG00000028839 TBPL1 -544733 sc-eQTL 1.43e-02 -0.155 0.0629 0.476 CD4T L1
ENSG00000079950 STX7 894239 sc-eQTL 4.21e-02 -0.134 0.0657 0.476 CD4T L1
ENSG00000112303 VNN2 643978 sc-eQTL 1.74e-01 -0.078 0.0572 0.476 CD4T L1
ENSG00000112306 RPS12 592868 sc-eQTL 2.93e-01 0.0411 0.039 0.476 CD4T L1
ENSG00000118515 SGK1 -910675 sc-eQTL 6.41e-01 0.0245 0.0525 0.476 CD4T L1
ENSG00000146409 SLC18B1 594098 sc-eQTL 9.22e-01 0.00775 0.0791 0.476 CD4T L1
ENSG00000028839 TBPL1 -544733 sc-eQTL 4.62e-03 -0.179 0.0627 0.476 CD8T L1
ENSG00000079950 STX7 894239 sc-eQTL 1.57e-02 -0.16 0.0658 0.476 CD8T L1
ENSG00000112303 VNN2 643978 sc-eQTL 5.46e-01 -0.0471 0.0778 0.476 CD8T L1
ENSG00000112306 RPS12 592868 sc-eQTL 7.26e-01 0.00932 0.0266 0.476 CD8T L1
ENSG00000118515 SGK1 -910675 sc-eQTL 7.82e-01 -0.0114 0.041 0.476 CD8T L1
ENSG00000146409 SLC18B1 594098 sc-eQTL 1.98e-01 0.103 0.0801 0.476 CD8T L1
ENSG00000028839 TBPL1 -544733 sc-eQTL 9.10e-01 -0.011 0.0967 0.475 DC L1
ENSG00000079950 STX7 894239 sc-eQTL 3.23e-02 -0.128 0.0594 0.475 DC L1
ENSG00000093134 VNN3 672672 sc-eQTL 5.77e-01 0.0416 0.0744 0.475 DC L1
ENSG00000112299 VNN1 693382 sc-eQTL 6.35e-01 0.0382 0.0804 0.475 DC L1
ENSG00000112303 VNN2 643978 sc-eQTL 6.63e-01 -0.0375 0.086 0.475 DC L1
ENSG00000112306 RPS12 592868 sc-eQTL 1.44e-01 0.0704 0.048 0.475 DC L1
ENSG00000118515 SGK1 -910675 sc-eQTL 8.14e-02 -0.0973 0.0556 0.475 DC L1
ENSG00000146409 SLC18B1 594098 sc-eQTL 4.39e-01 0.0592 0.0762 0.475 DC L1
ENSG00000286438 AL591115.1 304309 sc-eQTL 4.73e-01 -0.0499 0.0694 0.475 DC L1
ENSG00000286887 AL355881.1 -888864 sc-eQTL 6.11e-01 -0.0441 0.0866 0.475 DC L1
ENSG00000028839 TBPL1 -544733 sc-eQTL 4.42e-01 0.0516 0.067 0.476 Mono L1
ENSG00000079950 STX7 894239 sc-eQTL 9.62e-01 -0.00212 0.0449 0.476 Mono L1
ENSG00000093134 VNN3 672672 sc-eQTL 4.78e-01 -0.0547 0.077 0.476 Mono L1
ENSG00000112299 VNN1 693382 sc-eQTL 1.36e-01 -0.123 0.0825 0.476 Mono L1
ENSG00000112303 VNN2 643978 sc-eQTL 9.64e-01 -0.00262 0.0585 0.476 Mono L1
ENSG00000112306 RPS12 592868 sc-eQTL 6.08e-01 0.018 0.035 0.476 Mono L1
ENSG00000118515 SGK1 -910675 sc-eQTL 1.81e-02 -0.116 0.0489 0.476 Mono L1
ENSG00000146409 SLC18B1 594098 sc-eQTL 6.11e-01 0.0354 0.0693 0.476 Mono L1
ENSG00000286887 AL355881.1 -888864 sc-eQTL 1.85e-01 -0.0903 0.0679 0.476 Mono L1
ENSG00000028839 TBPL1 -544733 sc-eQTL 9.84e-01 0.00152 0.0739 0.476 NK L1
ENSG00000079950 STX7 894239 sc-eQTL 1.46e-01 -0.0992 0.068 0.476 NK L1
ENSG00000112303 VNN2 643978 sc-eQTL 5.21e-01 -0.0546 0.085 0.476 NK L1
ENSG00000112306 RPS12 592868 sc-eQTL 5.03e-01 0.0236 0.0352 0.476 NK L1
ENSG00000118515 SGK1 -910675 sc-eQTL 4.18e-01 0.0527 0.065 0.476 NK L1
ENSG00000028839 TBPL1 -544733 sc-eQTL 1.10e-01 0.139 0.0866 0.476 Other_T L1
ENSG00000079950 STX7 894239 sc-eQTL 1.69e-01 -0.0942 0.0683 0.476 Other_T L1
ENSG00000112303 VNN2 643978 sc-eQTL 6.89e-01 0.0332 0.0829 0.476 Other_T L1
ENSG00000112306 RPS12 592868 sc-eQTL 3.70e-01 0.0295 0.0328 0.476 Other_T L1
ENSG00000118515 SGK1 -910675 sc-eQTL 9.68e-01 0.00242 0.0605 0.476 Other_T L1
ENSG00000146409 SLC18B1 594098 sc-eQTL 7.07e-02 -0.162 0.0894 0.476 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -544733 sc-eQTL 4.88e-01 0.0713 0.102 0.495 B_Activated L2
ENSG00000079950 STX7 894239 sc-eQTL 8.64e-01 -0.0151 0.0879 0.495 B_Activated L2
ENSG00000112303 VNN2 643978 sc-eQTL 7.44e-01 0.0305 0.0935 0.495 B_Activated L2
ENSG00000112306 RPS12 592868 sc-eQTL 9.10e-01 -0.00569 0.0501 0.495 B_Activated L2
ENSG00000118515 SGK1 -910675 sc-eQTL 9.24e-01 -0.00854 0.0894 0.495 B_Activated L2
ENSG00000146409 SLC18B1 594098 sc-eQTL 6.44e-01 0.0406 0.0877 0.495 B_Activated L2
ENSG00000028839 TBPL1 -544733 sc-eQTL 2.90e-01 -0.103 0.0975 0.479 B_Intermediate L2
ENSG00000079950 STX7 894239 sc-eQTL 3.23e-02 -0.12 0.0556 0.479 B_Intermediate L2
ENSG00000112303 VNN2 643978 sc-eQTL 9.64e-01 -0.00377 0.0846 0.479 B_Intermediate L2
ENSG00000112306 RPS12 592868 sc-eQTL 7.46e-01 -0.0168 0.0518 0.479 B_Intermediate L2
ENSG00000118515 SGK1 -910675 sc-eQTL 2.90e-01 -0.0947 0.0893 0.479 B_Intermediate L2
ENSG00000146409 SLC18B1 594098 sc-eQTL 2.74e-01 0.102 0.0931 0.479 B_Intermediate L2
ENSG00000028839 TBPL1 -544733 sc-eQTL 8.67e-01 0.0157 0.0933 0.474 B_Memory L2
ENSG00000079950 STX7 894239 sc-eQTL 1.48e-01 -0.0975 0.0672 0.474 B_Memory L2
ENSG00000112303 VNN2 643978 sc-eQTL 1.95e-01 -0.114 0.088 0.474 B_Memory L2
ENSG00000112306 RPS12 592868 sc-eQTL 9.23e-01 0.0041 0.0426 0.474 B_Memory L2
ENSG00000118515 SGK1 -910675 sc-eQTL 1.26e-01 -0.119 0.0776 0.474 B_Memory L2
ENSG00000146409 SLC18B1 594098 sc-eQTL 1.14e-01 -0.14 0.0883 0.474 B_Memory L2
ENSG00000028839 TBPL1 -544733 sc-eQTL 1.48e-01 -0.127 0.0878 0.476 B_Naive1 L2
ENSG00000079950 STX7 894239 sc-eQTL 5.74e-01 -0.0238 0.0424 0.476 B_Naive1 L2
ENSG00000112303 VNN2 643978 sc-eQTL 1.67e-01 0.114 0.082 0.476 B_Naive1 L2
ENSG00000112306 RPS12 592868 sc-eQTL 9.73e-01 0.00156 0.0469 0.476 B_Naive1 L2
ENSG00000118515 SGK1 -910675 sc-eQTL 9.69e-01 -0.00284 0.0734 0.476 B_Naive1 L2
ENSG00000146409 SLC18B1 594098 sc-eQTL 4.72e-02 0.179 0.0896 0.476 B_Naive1 L2
ENSG00000028839 TBPL1 -544733 sc-eQTL 2.44e-01 -0.108 0.0926 0.474 B_Naive2 L2
ENSG00000079950 STX7 894239 sc-eQTL 9.08e-01 0.00568 0.0494 0.474 B_Naive2 L2
ENSG00000112303 VNN2 643978 sc-eQTL 1.48e-01 -0.131 0.0902 0.474 B_Naive2 L2
ENSG00000112306 RPS12 592868 sc-eQTL 6.31e-01 -0.0231 0.048 0.474 B_Naive2 L2
ENSG00000118515 SGK1 -910675 sc-eQTL 1.95e-01 0.11 0.0844 0.474 B_Naive2 L2
ENSG00000146409 SLC18B1 594098 sc-eQTL 9.93e-01 0.000786 0.0915 0.474 B_Naive2 L2
ENSG00000028839 TBPL1 -544733 sc-eQTL 9.04e-01 0.0112 0.0925 0.473 CD4_CTL L2
ENSG00000079950 STX7 894239 sc-eQTL 6.82e-01 -0.0377 0.0918 0.473 CD4_CTL L2
ENSG00000112303 VNN2 643978 sc-eQTL 1.21e-01 -0.144 0.0921 0.473 CD4_CTL L2
ENSG00000112306 RPS12 592868 sc-eQTL 2.27e-01 0.0517 0.0427 0.473 CD4_CTL L2
ENSG00000118515 SGK1 -910675 sc-eQTL 3.00e-01 -0.077 0.0741 0.473 CD4_CTL L2
ENSG00000146409 SLC18B1 594098 sc-eQTL 8.96e-01 -0.0113 0.0864 0.473 CD4_CTL L2
ENSG00000028839 TBPL1 -544733 sc-eQTL 3.19e-01 -0.0724 0.0725 0.476 CD4_Naive L2
ENSG00000079950 STX7 894239 sc-eQTL 4.15e-01 -0.0582 0.0712 0.476 CD4_Naive L2
ENSG00000112303 VNN2 643978 sc-eQTL 9.78e-02 -0.109 0.0656 0.476 CD4_Naive L2
ENSG00000112306 RPS12 592868 sc-eQTL 3.77e-01 0.0379 0.0428 0.476 CD4_Naive L2
ENSG00000118515 SGK1 -910675 sc-eQTL 4.74e-01 0.0376 0.0524 0.476 CD4_Naive L2
ENSG00000146409 SLC18B1 594098 sc-eQTL 7.80e-01 -0.0231 0.0825 0.476 CD4_Naive L2
ENSG00000028839 TBPL1 -544733 sc-eQTL 1.51e-01 -0.113 0.0784 0.476 CD4_TCM L2
ENSG00000079950 STX7 894239 sc-eQTL 3.03e-02 -0.171 0.0784 0.476 CD4_TCM L2
ENSG00000112303 VNN2 643978 sc-eQTL 2.43e-01 0.0913 0.0779 0.476 CD4_TCM L2
ENSG00000112306 RPS12 592868 sc-eQTL 2.56e-01 0.046 0.0404 0.476 CD4_TCM L2
ENSG00000118515 SGK1 -910675 sc-eQTL 3.73e-01 -0.0505 0.0566 0.476 CD4_TCM L2
ENSG00000146409 SLC18B1 594098 sc-eQTL 8.59e-01 0.0167 0.0939 0.476 CD4_TCM L2
ENSG00000028839 TBPL1 -544733 sc-eQTL 4.42e-01 -0.0703 0.0913 0.476 CD4_TEM L2
ENSG00000079950 STX7 894239 sc-eQTL 3.12e-01 -0.0926 0.0913 0.476 CD4_TEM L2
ENSG00000112303 VNN2 643978 sc-eQTL 9.19e-02 -0.148 0.0873 0.476 CD4_TEM L2
ENSG00000112306 RPS12 592868 sc-eQTL 2.11e-01 0.045 0.0359 0.476 CD4_TEM L2
ENSG00000118515 SGK1 -910675 sc-eQTL 4.78e-01 -0.0439 0.0619 0.476 CD4_TEM L2
ENSG00000146409 SLC18B1 594098 sc-eQTL 1.85e-01 -0.119 0.0892 0.476 CD4_TEM L2
ENSG00000028839 TBPL1 -544733 sc-eQTL 5.37e-01 -0.0497 0.0805 0.476 CD8_CTL L2
ENSG00000079950 STX7 894239 sc-eQTL 6.58e-02 -0.138 0.0747 0.476 CD8_CTL L2
ENSG00000112303 VNN2 643978 sc-eQTL 7.62e-01 -0.0259 0.0855 0.476 CD8_CTL L2
ENSG00000112306 RPS12 592868 sc-eQTL 6.69e-01 0.0196 0.0458 0.476 CD8_CTL L2
ENSG00000118515 SGK1 -910675 sc-eQTL 3.13e-01 -0.078 0.0771 0.476 CD8_CTL L2
ENSG00000146409 SLC18B1 594098 sc-eQTL 6.94e-01 0.0349 0.0887 0.476 CD8_CTL L2
ENSG00000028839 TBPL1 -544733 sc-eQTL 1.36e-01 -0.129 0.086 0.476 CD8_Naive L2
ENSG00000079950 STX7 894239 sc-eQTL 3.77e-02 -0.191 0.0911 0.476 CD8_Naive L2
ENSG00000112303 VNN2 643978 sc-eQTL 3.22e-01 -0.0787 0.0793 0.476 CD8_Naive L2
ENSG00000112306 RPS12 592868 sc-eQTL 4.55e-02 0.0907 0.0451 0.476 CD8_Naive L2
ENSG00000118515 SGK1 -910675 sc-eQTL 7.70e-01 0.0167 0.0571 0.476 CD8_Naive L2
ENSG00000146409 SLC18B1 594098 sc-eQTL 2.11e-01 0.114 0.0909 0.476 CD8_Naive L2
ENSG00000028839 TBPL1 -544733 sc-eQTL 8.16e-01 -0.023 0.0986 0.47 CD8_TCM L2
ENSG00000079950 STX7 894239 sc-eQTL 1.23e-01 -0.141 0.0907 0.47 CD8_TCM L2
ENSG00000112303 VNN2 643978 sc-eQTL 4.98e-01 0.0614 0.0905 0.47 CD8_TCM L2
ENSG00000112306 RPS12 592868 sc-eQTL 5.23e-01 0.0282 0.0441 0.47 CD8_TCM L2
ENSG00000118515 SGK1 -910675 sc-eQTL 6.65e-01 -0.0317 0.0731 0.47 CD8_TCM L2
ENSG00000146409 SLC18B1 594098 sc-eQTL 8.69e-01 -0.0159 0.0968 0.47 CD8_TCM L2
ENSG00000028839 TBPL1 -544733 sc-eQTL 5.14e-01 -0.0588 0.0899 0.477 CD8_TEM L2
ENSG00000079950 STX7 894239 sc-eQTL 1.53e-01 0.14 0.0977 0.477 CD8_TEM L2
ENSG00000112303 VNN2 643978 sc-eQTL 2.35e-01 -0.116 0.0973 0.477 CD8_TEM L2
ENSG00000112306 RPS12 592868 sc-eQTL 8.03e-01 -0.0131 0.0525 0.477 CD8_TEM L2
ENSG00000118515 SGK1 -910675 sc-eQTL 5.25e-02 -0.166 0.0853 0.477 CD8_TEM L2
ENSG00000146409 SLC18B1 594098 sc-eQTL 7.92e-01 -0.0262 0.0993 0.477 CD8_TEM L2
ENSG00000028839 TBPL1 -544733 sc-eQTL 2.94e-01 0.0955 0.0907 0.474 MAIT L2
ENSG00000079950 STX7 894239 sc-eQTL 1.68e-01 -0.119 0.086 0.474 MAIT L2
ENSG00000112303 VNN2 643978 sc-eQTL 8.26e-01 0.0193 0.0879 0.474 MAIT L2
ENSG00000112306 RPS12 592868 sc-eQTL 3.77e-01 0.0382 0.0431 0.474 MAIT L2
ENSG00000118515 SGK1 -910675 sc-eQTL 7.14e-01 0.0223 0.0608 0.474 MAIT L2
ENSG00000146409 SLC18B1 594098 sc-eQTL 5.91e-02 -0.17 0.0898 0.474 MAIT L2
ENSG00000028839 TBPL1 -544733 sc-eQTL 9.18e-01 -0.0103 0.0992 0.478 NK_CD56bright L2
ENSG00000079950 STX7 894239 sc-eQTL 3.32e-01 -0.0892 0.0917 0.478 NK_CD56bright L2
ENSG00000112303 VNN2 643978 sc-eQTL 8.04e-01 -0.0233 0.0934 0.478 NK_CD56bright L2
ENSG00000112306 RPS12 592868 sc-eQTL 6.78e-01 -0.0216 0.052 0.478 NK_CD56bright L2
ENSG00000118515 SGK1 -910675 sc-eQTL 4.79e-01 0.0551 0.0777 0.478 NK_CD56bright L2
ENSG00000028839 TBPL1 -544733 sc-eQTL 9.61e-02 0.131 0.0786 0.474 NK_CD56dim L2
ENSG00000079950 STX7 894239 sc-eQTL 3.85e-01 -0.0629 0.0723 0.474 NK_CD56dim L2
ENSG00000112303 VNN2 643978 sc-eQTL 8.53e-01 0.0168 0.0906 0.474 NK_CD56dim L2
ENSG00000112306 RPS12 592868 sc-eQTL 3.28e-01 0.0352 0.0359 0.474 NK_CD56dim L2
ENSG00000118515 SGK1 -910675 sc-eQTL 4.24e-01 -0.0637 0.0796 0.474 NK_CD56dim L2
ENSG00000028839 TBPL1 -544733 sc-eQTL 4.02e-01 -0.0832 0.0991 0.475 NK_HLA L2
ENSG00000079950 STX7 894239 sc-eQTL 5.88e-01 -0.0491 0.0903 0.475 NK_HLA L2
ENSG00000112303 VNN2 643978 sc-eQTL 9.79e-01 -0.00242 0.0915 0.475 NK_HLA L2
ENSG00000112306 RPS12 592868 sc-eQTL 8.43e-01 -0.00845 0.0426 0.475 NK_HLA L2
ENSG00000118515 SGK1 -910675 sc-eQTL 9.34e-01 0.00703 0.0843 0.475 NK_HLA L2
ENSG00000028839 TBPL1 -544733 sc-eQTL 1.37e-01 -0.123 0.0821 0.474 NK_cytokine L2
ENSG00000079950 STX7 894239 sc-eQTL 2.41e-01 -0.0937 0.0797 0.474 NK_cytokine L2
ENSG00000112303 VNN2 643978 sc-eQTL 1.66e-01 -0.125 0.0895 0.474 NK_cytokine L2
ENSG00000112306 RPS12 592868 sc-eQTL 7.56e-01 0.0152 0.0488 0.474 NK_cytokine L2
ENSG00000118515 SGK1 -910675 sc-eQTL 1.87e-02 0.19 0.0801 0.474 NK_cytokine L2
ENSG00000028839 TBPL1 -544733 sc-eQTL 7.67e-01 -0.0342 0.115 0.481 PB L2
ENSG00000079950 STX7 894239 sc-eQTL 4.19e-01 -0.0664 0.0819 0.481 PB L2
ENSG00000112303 VNN2 643978 sc-eQTL 4.61e-01 -0.0741 0.1 0.481 PB L2
ENSG00000112306 RPS12 592868 sc-eQTL 2.89e-01 0.0604 0.0567 0.481 PB L2
ENSG00000118515 SGK1 -910675 sc-eQTL 9.56e-01 0.00513 0.0921 0.481 PB L2
ENSG00000146409 SLC18B1 594098 sc-eQTL 8.07e-02 -0.186 0.105 0.481 PB L2
ENSG00000028839 TBPL1 -544733 sc-eQTL 1.84e-01 0.126 0.0946 0.48 Pro_T L2
ENSG00000079950 STX7 894239 sc-eQTL 4.45e-01 -0.0648 0.0847 0.48 Pro_T L2
ENSG00000112303 VNN2 643978 sc-eQTL 2.43e-01 0.106 0.0907 0.48 Pro_T L2
ENSG00000112306 RPS12 592868 sc-eQTL 8.08e-01 0.00836 0.0344 0.48 Pro_T L2
ENSG00000118515 SGK1 -910675 sc-eQTL 2.76e-01 -0.0752 0.0688 0.48 Pro_T L2
ENSG00000146409 SLC18B1 594098 sc-eQTL 1.03e-01 -0.145 0.0885 0.48 Pro_T L2
ENSG00000028839 TBPL1 -544733 sc-eQTL 4.82e-02 -0.183 0.0919 0.476 Treg L2
ENSG00000079950 STX7 894239 sc-eQTL 5.10e-01 -0.0577 0.0874 0.476 Treg L2
ENSG00000112303 VNN2 643978 sc-eQTL 8.85e-01 -0.0106 0.0736 0.476 Treg L2
ENSG00000112306 RPS12 592868 sc-eQTL 7.48e-01 -0.0105 0.0325 0.476 Treg L2
ENSG00000118515 SGK1 -910675 sc-eQTL 2.44e-01 -0.0799 0.0684 0.476 Treg L2
ENSG00000146409 SLC18B1 594098 sc-eQTL 9.66e-02 0.152 0.0914 0.476 Treg L2
ENSG00000028839 TBPL1 -544733 sc-eQTL 9.30e-01 0.00869 0.0985 0.476 cDC L2
ENSG00000079950 STX7 894239 sc-eQTL 3.31e-01 -0.0752 0.0772 0.476 cDC L2
ENSG00000093134 VNN3 672672 sc-eQTL 3.14e-01 -0.0774 0.0766 0.476 cDC L2
ENSG00000112299 VNN1 693382 sc-eQTL 5.68e-01 -0.0516 0.0903 0.476 cDC L2
ENSG00000112303 VNN2 643978 sc-eQTL 3.02e-01 -0.0909 0.0877 0.476 cDC L2
ENSG00000112306 RPS12 592868 sc-eQTL 1.81e-01 0.058 0.0432 0.476 cDC L2
ENSG00000118515 SGK1 -910675 sc-eQTL 4.73e-02 -0.145 0.0724 0.476 cDC L2
ENSG00000146409 SLC18B1 594098 sc-eQTL 5.65e-01 -0.0496 0.086 0.476 cDC L2
ENSG00000286438 AL591115.1 304309 sc-eQTL 9.60e-01 -0.00348 0.0688 0.476 cDC L2
ENSG00000286887 AL355881.1 -888864 sc-eQTL 5.60e-01 -0.0493 0.0846 0.476 cDC L2
ENSG00000028839 TBPL1 -544733 sc-eQTL 8.01e-01 0.0194 0.0765 0.476 cMono_IL1B L2
ENSG00000079950 STX7 894239 sc-eQTL 6.41e-01 -0.0271 0.0581 0.476 cMono_IL1B L2
ENSG00000093134 VNN3 672672 sc-eQTL 7.65e-01 -0.0246 0.0821 0.476 cMono_IL1B L2
ENSG00000112299 VNN1 693382 sc-eQTL 2.95e-02 -0.179 0.0819 0.476 cMono_IL1B L2
ENSG00000112303 VNN2 643978 sc-eQTL 5.14e-01 0.0432 0.0662 0.476 cMono_IL1B L2
ENSG00000112306 RPS12 592868 sc-eQTL 8.72e-01 0.00593 0.0368 0.476 cMono_IL1B L2
ENSG00000118515 SGK1 -910675 sc-eQTL 5.34e-02 -0.106 0.0544 0.476 cMono_IL1B L2
ENSG00000146409 SLC18B1 594098 sc-eQTL 6.32e-01 0.034 0.0709 0.476 cMono_IL1B L2
ENSG00000286887 AL355881.1 -888864 sc-eQTL 2.76e-01 -0.0805 0.0737 0.476 cMono_IL1B L2
ENSG00000028839 TBPL1 -544733 sc-eQTL 4.28e-01 0.0692 0.0871 0.476 cMono_S100A L2
ENSG00000079950 STX7 894239 sc-eQTL 5.21e-01 -0.0404 0.0629 0.476 cMono_S100A L2
ENSG00000093134 VNN3 672672 sc-eQTL 3.03e-01 -0.0811 0.0785 0.476 cMono_S100A L2
ENSG00000112299 VNN1 693382 sc-eQTL 4.21e-01 -0.0687 0.0853 0.476 cMono_S100A L2
ENSG00000112303 VNN2 643978 sc-eQTL 9.74e-01 -0.00182 0.056 0.476 cMono_S100A L2
ENSG00000112306 RPS12 592868 sc-eQTL 3.00e-01 0.0417 0.0402 0.476 cMono_S100A L2
ENSG00000118515 SGK1 -910675 sc-eQTL 1.81e-01 -0.0616 0.0459 0.476 cMono_S100A L2
ENSG00000146409 SLC18B1 594098 sc-eQTL 1.60e-01 0.105 0.0742 0.476 cMono_S100A L2
ENSG00000286887 AL355881.1 -888864 sc-eQTL 6.20e-01 -0.0362 0.0729 0.476 cMono_S100A L2
ENSG00000028839 TBPL1 -544733 sc-eQTL 1.67e-01 0.171 0.123 0.464 gdT L2
ENSG00000079950 STX7 894239 sc-eQTL 7.50e-01 -0.034 0.107 0.464 gdT L2
ENSG00000112303 VNN2 643978 sc-eQTL 7.22e-01 0.042 0.118 0.464 gdT L2
ENSG00000112306 RPS12 592868 sc-eQTL 2.18e-02 0.102 0.0441 0.464 gdT L2
ENSG00000118515 SGK1 -910675 sc-eQTL 2.68e-01 -0.094 0.0844 0.464 gdT L2
ENSG00000146409 SLC18B1 594098 sc-eQTL 4.07e-01 0.0963 0.116 0.464 gdT L2
ENSG00000028839 TBPL1 -544733 sc-eQTL 6.48e-01 0.0405 0.0885 0.478 intMono L2
ENSG00000079950 STX7 894239 sc-eQTL 1.81e-01 -0.113 0.0842 0.478 intMono L2
ENSG00000093134 VNN3 672672 sc-eQTL 2.45e-01 -0.0992 0.0851 0.478 intMono L2
ENSG00000112299 VNN1 693382 sc-eQTL 3.65e-01 -0.0766 0.0843 0.478 intMono L2
ENSG00000112303 VNN2 643978 sc-eQTL 3.14e-01 -0.0864 0.0856 0.478 intMono L2
ENSG00000112306 RPS12 592868 sc-eQTL 5.31e-01 0.0234 0.0373 0.478 intMono L2
ENSG00000118515 SGK1 -910675 sc-eQTL 2.58e-01 -0.071 0.0625 0.478 intMono L2
ENSG00000146409 SLC18B1 594098 sc-eQTL 6.51e-01 0.0411 0.0909 0.478 intMono L2
ENSG00000286887 AL355881.1 -888864 sc-eQTL 4.50e-01 -0.0657 0.0868 0.478 intMono L2
ENSG00000028839 TBPL1 -544733 sc-eQTL 3.04e-01 -0.0956 0.0928 0.486 ncMono L2
ENSG00000079950 STX7 894239 sc-eQTL 7.31e-01 0.0217 0.0629 0.486 ncMono L2
ENSG00000093134 VNN3 672672 sc-eQTL 2.34e-01 -0.106 0.0885 0.486 ncMono L2
ENSG00000112299 VNN1 693382 sc-eQTL 7.86e-01 0.0239 0.0881 0.486 ncMono L2
ENSG00000112303 VNN2 643978 sc-eQTL 1.41e-01 -0.124 0.0843 0.486 ncMono L2
ENSG00000112306 RPS12 592868 sc-eQTL 4.91e-01 0.0293 0.0425 0.486 ncMono L2
ENSG00000118515 SGK1 -910675 sc-eQTL 1.07e-01 -0.0967 0.0597 0.486 ncMono L2
ENSG00000146409 SLC18B1 594098 sc-eQTL 2.36e-01 -0.0889 0.0748 0.486 ncMono L2
ENSG00000286887 AL355881.1 -888864 sc-eQTL 5.43e-01 0.0483 0.0793 0.486 ncMono L2
ENSG00000028839 TBPL1 -544733 sc-eQTL 5.55e-01 0.0657 0.111 0.472 pDC L2
ENSG00000079950 STX7 894239 sc-eQTL 7.06e-02 -0.133 0.0733 0.472 pDC L2
ENSG00000093134 VNN3 672672 sc-eQTL 7.62e-02 0.132 0.0738 0.472 pDC L2
ENSG00000112299 VNN1 693382 sc-eQTL 2.81e-01 0.0818 0.0756 0.472 pDC L2
ENSG00000112303 VNN2 643978 sc-eQTL 4.43e-02 0.181 0.0891 0.472 pDC L2
ENSG00000112306 RPS12 592868 sc-eQTL 1.52e-01 0.0889 0.0618 0.472 pDC L2
ENSG00000118515 SGK1 -910675 sc-eQTL 9.94e-01 -0.000438 0.0632 0.472 pDC L2
ENSG00000146409 SLC18B1 594098 sc-eQTL 9.83e-02 0.152 0.0913 0.472 pDC L2
ENSG00000286438 AL591115.1 304309 sc-eQTL 4.17e-01 -0.0715 0.0879 0.472 pDC L2
ENSG00000286887 AL355881.1 -888864 sc-eQTL 2.83e-01 0.0838 0.0778 0.472 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -544733 sc-eQTL 1.77e-01 -0.126 0.0932 0.476 B_Memory LOneK1K
ENSG00000079950 STX7 894239 sc-eQTL 1.60e-02 -0.123 0.0508 0.476 B_Memory LOneK1K
ENSG00000112303 VNN2 643978 sc-eQTL 7.01e-02 -0.147 0.0809 0.476 B_Memory LOneK1K
ENSG00000112306 RPS12 592868 sc-eQTL 4.06e-01 0.0386 0.0464 0.476 B_Memory LOneK1K
ENSG00000118515 SGK1 -910675 sc-eQTL 3.17e-01 -0.0727 0.0724 0.476 B_Memory LOneK1K
ENSG00000146409 SLC18B1 594098 sc-eQTL 4.63e-01 0.0626 0.0851 0.476 B_Memory LOneK1K
ENSG00000028839 TBPL1 -544733 sc-eQTL 7.44e-02 -0.155 0.0866 0.476 B_Naive LOneK1K
ENSG00000079950 STX7 894239 sc-eQTL 8.24e-01 -0.00875 0.0393 0.476 B_Naive LOneK1K
ENSG00000112303 VNN2 643978 sc-eQTL 8.38e-01 0.0156 0.0763 0.476 B_Naive LOneK1K
ENSG00000112306 RPS12 592868 sc-eQTL 5.56e-01 -0.0272 0.0461 0.476 B_Naive LOneK1K
ENSG00000118515 SGK1 -910675 sc-eQTL 6.53e-01 0.0322 0.0714 0.476 B_Naive LOneK1K
ENSG00000146409 SLC18B1 594098 sc-eQTL 8.14e-02 0.151 0.0865 0.476 B_Naive LOneK1K
ENSG00000028839 TBPL1 -544733 sc-eQTL 3.25e-01 0.0687 0.0697 0.476 CD14_Mono LOneK1K
ENSG00000079950 STX7 894239 sc-eQTL 7.30e-01 -0.0168 0.0486 0.476 CD14_Mono LOneK1K
ENSG00000093134 VNN3 672672 sc-eQTL 6.22e-01 -0.0391 0.0791 0.476 CD14_Mono LOneK1K
ENSG00000112299 VNN1 693382 sc-eQTL 6.53e-02 -0.152 0.0819 0.476 CD14_Mono LOneK1K
ENSG00000112303 VNN2 643978 sc-eQTL 8.30e-01 0.0117 0.0546 0.476 CD14_Mono LOneK1K
ENSG00000112306 RPS12 592868 sc-eQTL 7.46e-01 0.0121 0.0374 0.476 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -910675 sc-eQTL 5.33e-02 -0.0983 0.0506 0.476 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 594098 sc-eQTL 3.88e-01 0.0575 0.0665 0.476 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -888864 sc-eQTL 3.02e-01 -0.0722 0.0697 0.476 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -544733 sc-eQTL 8.06e-01 -0.0221 0.0896 0.476 CD16_Mono LOneK1K
ENSG00000079950 STX7 894239 sc-eQTL 6.45e-01 -0.0272 0.0591 0.476 CD16_Mono LOneK1K
ENSG00000093134 VNN3 672672 sc-eQTL 2.73e-01 -0.0954 0.0867 0.476 CD16_Mono LOneK1K
ENSG00000112299 VNN1 693382 sc-eQTL 7.63e-01 -0.026 0.0862 0.476 CD16_Mono LOneK1K
ENSG00000112303 VNN2 643978 sc-eQTL 1.88e-01 -0.107 0.0809 0.476 CD16_Mono LOneK1K
ENSG00000112306 RPS12 592868 sc-eQTL 3.07e-01 0.0352 0.0344 0.476 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -910675 sc-eQTL 7.34e-02 -0.0932 0.0518 0.476 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 594098 sc-eQTL 7.79e-01 0.0236 0.0837 0.476 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -888864 sc-eQTL 4.84e-01 -0.0531 0.0756 0.476 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -544733 sc-eQTL 8.97e-01 0.00943 0.0729 0.474 NK_CD56dim LOneK1K
ENSG00000079950 STX7 894239 sc-eQTL 1.88e-01 -0.09 0.0682 0.474 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 643978 sc-eQTL 4.91e-01 -0.0598 0.0866 0.474 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 592868 sc-eQTL 3.90e-01 0.0304 0.0353 0.474 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -910675 sc-eQTL 5.01e-01 0.0491 0.073 0.474 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079950 STX7 894239 eQTL 0.0032 -0.0465 0.0157 0.0 0.0 0.466
ENSG00000112299 VNN1 693382 pQTL 0.00313 -0.103 0.0348 0.0 0.0 0.46

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000028839 \N -544733 1.04e-06 4.97e-07 8.99e-08 3.48e-07 9.86e-08 2.12e-07 5.01e-07 1.31e-07 3.82e-07 2.34e-07 5.73e-07 3.91e-07 6.77e-07 1.41e-07 2.77e-07 2.18e-07 3.24e-07 3.79e-07 1.69e-07 1.32e-07 1.87e-07 3.49e-07 3.11e-07 1.15e-07 7.42e-07 2.42e-07 2.56e-07 2.71e-07 3e-07 3.93e-07 2.6e-07 5.25e-08 5.55e-08 1.39e-07 3.07e-07 1.16e-07 1.03e-07 6.67e-08 4.72e-08 5.64e-08 3.27e-08 4.55e-07 2.99e-08 1.99e-08 9.95e-08 1.42e-08 9.46e-08 1.17e-08 5.69e-08
ENSG00000079950 STX7 894239 3.14e-07 1.36e-07 4.98e-08 1.9e-07 1.03e-07 8.21e-08 1.67e-07 5.75e-08 1.47e-07 6.75e-08 1.73e-07 1.2e-07 1.69e-07 7.95e-08 5.43e-08 7.97e-08 4.45e-08 1.51e-07 6.32e-08 4.92e-08 1.25e-07 1.25e-07 1.5e-07 2.91e-08 1.68e-07 1.22e-07 1.12e-07 1.04e-07 1.24e-07 9.88e-08 1.07e-07 4.47e-08 3.73e-08 8.89e-08 3.52e-08 2.68e-08 5.61e-08 8.63e-08 6.55e-08 4.47e-08 5.13e-08 1.46e-07 5.27e-08 1.11e-08 3.4e-08 1.71e-08 1.2e-07 1.93e-09 5e-08