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Genes within 1Mb (chr6:133407026:G:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -545144 sc-eQTL 9.67e-02 -0.249 0.149 0.904 B L1
ENSG00000079950 STX7 893828 sc-eQTL 1.38e-01 0.0886 0.0594 0.904 B L1
ENSG00000112303 VNN2 643567 sc-eQTL 2.68e-01 -0.124 0.112 0.904 B L1
ENSG00000112306 RPS12 592457 sc-eQTL 1.93e-01 0.0883 0.0677 0.904 B L1
ENSG00000118515 SGK1 -911086 sc-eQTL 2.84e-01 -0.112 0.104 0.904 B L1
ENSG00000146409 SLC18B1 593687 sc-eQTL 9.95e-01 -0.000939 0.143 0.904 B L1
ENSG00000028839 TBPL1 -545144 sc-eQTL 3.62e-01 -0.1 0.11 0.904 CD4T L1
ENSG00000079950 STX7 893828 sc-eQTL 3.79e-01 -0.101 0.114 0.904 CD4T L1
ENSG00000112303 VNN2 643567 sc-eQTL 7.48e-01 -0.0318 0.0991 0.904 CD4T L1
ENSG00000112306 RPS12 592457 sc-eQTL 7.07e-01 0.0253 0.0674 0.904 CD4T L1
ENSG00000118515 SGK1 -911086 sc-eQTL 9.88e-01 -0.00142 0.0906 0.904 CD4T L1
ENSG00000146409 SLC18B1 593687 sc-eQTL 1.23e-01 -0.21 0.136 0.904 CD4T L1
ENSG00000028839 TBPL1 -545144 sc-eQTL 6.08e-02 -0.204 0.108 0.904 CD8T L1
ENSG00000079950 STX7 893828 sc-eQTL 1.14e-01 -0.18 0.113 0.904 CD8T L1
ENSG00000112303 VNN2 643567 sc-eQTL 2.06e-01 -0.168 0.133 0.904 CD8T L1
ENSG00000112306 RPS12 592457 sc-eQTL 4.54e-01 0.0342 0.0455 0.904 CD8T L1
ENSG00000118515 SGK1 -911086 sc-eQTL 3.56e-01 -0.0648 0.0701 0.904 CD8T L1
ENSG00000146409 SLC18B1 593687 sc-eQTL 7.82e-01 -0.0381 0.138 0.904 CD8T L1
ENSG00000028839 TBPL1 -545144 sc-eQTL 8.38e-01 -0.0339 0.165 0.901 DC L1
ENSG00000079950 STX7 893828 sc-eQTL 9.03e-01 -0.0125 0.103 0.901 DC L1
ENSG00000093134 VNN3 672261 sc-eQTL 1.24e-01 -0.195 0.127 0.901 DC L1
ENSG00000112299 VNN1 692971 sc-eQTL 6.55e-01 -0.0614 0.137 0.901 DC L1
ENSG00000112303 VNN2 643567 sc-eQTL 3.63e-01 -0.134 0.147 0.901 DC L1
ENSG00000112306 RPS12 592457 sc-eQTL 3.19e-01 -0.0822 0.0823 0.901 DC L1
ENSG00000118515 SGK1 -911086 sc-eQTL 3.97e-02 -0.196 0.0947 0.901 DC L1
ENSG00000146409 SLC18B1 593687 sc-eQTL 4.25e-01 -0.104 0.13 0.901 DC L1
ENSG00000286438 AL591115.1 303898 sc-eQTL 5.23e-01 -0.0759 0.119 0.901 DC L1
ENSG00000286887 AL355881.1 -889275 sc-eQTL 6.22e-01 -0.073 0.148 0.901 DC L1
ENSG00000028839 TBPL1 -545144 sc-eQTL 7.34e-01 0.0392 0.115 0.904 Mono L1
ENSG00000079950 STX7 893828 sc-eQTL 1.94e-01 0.1 0.0769 0.904 Mono L1
ENSG00000093134 VNN3 672261 sc-eQTL 8.71e-01 0.0216 0.132 0.904 Mono L1
ENSG00000112299 VNN1 692971 sc-eQTL 6.87e-01 0.0575 0.143 0.904 Mono L1
ENSG00000112303 VNN2 643567 sc-eQTL 7.60e-02 -0.178 0.0999 0.904 Mono L1
ENSG00000112306 RPS12 592457 sc-eQTL 7.17e-01 -0.0219 0.0603 0.904 Mono L1
ENSG00000118515 SGK1 -911086 sc-eQTL 3.43e-01 -0.0807 0.085 0.904 Mono L1
ENSG00000146409 SLC18B1 593687 sc-eQTL 4.86e-01 -0.0832 0.119 0.904 Mono L1
ENSG00000286887 AL355881.1 -889275 sc-eQTL 9.78e-02 -0.194 0.116 0.904 Mono L1
ENSG00000028839 TBPL1 -545144 sc-eQTL 3.87e-01 0.111 0.128 0.903 NK L1
ENSG00000079950 STX7 893828 sc-eQTL 8.19e-02 0.206 0.118 0.903 NK L1
ENSG00000112303 VNN2 643567 sc-eQTL 9.99e-01 -0.000241 0.148 0.903 NK L1
ENSG00000112306 RPS12 592457 sc-eQTL 7.75e-01 -0.0175 0.0612 0.903 NK L1
ENSG00000118515 SGK1 -911086 sc-eQTL 7.41e-01 -0.0375 0.113 0.903 NK L1
ENSG00000028839 TBPL1 -545144 sc-eQTL 5.37e-01 0.0931 0.151 0.904 Other_T L1
ENSG00000079950 STX7 893828 sc-eQTL 7.34e-01 -0.0404 0.119 0.904 Other_T L1
ENSG00000112303 VNN2 643567 sc-eQTL 3.00e-01 -0.149 0.143 0.904 Other_T L1
ENSG00000112306 RPS12 592457 sc-eQTL 6.65e-01 -0.0247 0.0568 0.904 Other_T L1
ENSG00000118515 SGK1 -911086 sc-eQTL 7.46e-01 -0.0339 0.105 0.904 Other_T L1
ENSG00000146409 SLC18B1 593687 sc-eQTL 5.93e-02 -0.293 0.154 0.904 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -545144 sc-eQTL 5.49e-01 0.11 0.183 0.911 B_Activated L2
ENSG00000079950 STX7 893828 sc-eQTL 8.70e-01 0.0256 0.157 0.911 B_Activated L2
ENSG00000112303 VNN2 643567 sc-eQTL 4.56e-01 0.124 0.167 0.911 B_Activated L2
ENSG00000112306 RPS12 592457 sc-eQTL 8.97e-01 -0.0116 0.0894 0.911 B_Activated L2
ENSG00000118515 SGK1 -911086 sc-eQTL 8.42e-01 0.0319 0.159 0.911 B_Activated L2
ENSG00000146409 SLC18B1 593687 sc-eQTL 7.06e-01 0.0591 0.157 0.911 B_Activated L2
ENSG00000028839 TBPL1 -545144 sc-eQTL 3.11e-01 0.168 0.165 0.903 B_Intermediate L2
ENSG00000079950 STX7 893828 sc-eQTL 4.75e-01 0.068 0.095 0.903 B_Intermediate L2
ENSG00000112303 VNN2 643567 sc-eQTL 6.33e-01 0.0686 0.143 0.903 B_Intermediate L2
ENSG00000112306 RPS12 592457 sc-eQTL 1.73e-01 0.119 0.0873 0.903 B_Intermediate L2
ENSG00000118515 SGK1 -911086 sc-eQTL 7.82e-02 -0.266 0.151 0.903 B_Intermediate L2
ENSG00000146409 SLC18B1 593687 sc-eQTL 7.97e-01 -0.0407 0.158 0.903 B_Intermediate L2
ENSG00000028839 TBPL1 -545144 sc-eQTL 9.10e-01 0.018 0.16 0.903 B_Memory L2
ENSG00000079950 STX7 893828 sc-eQTL 1.03e-03 0.375 0.113 0.903 B_Memory L2
ENSG00000112303 VNN2 643567 sc-eQTL 2.10e-01 -0.189 0.151 0.903 B_Memory L2
ENSG00000112306 RPS12 592457 sc-eQTL 7.84e-01 0.02 0.0728 0.903 B_Memory L2
ENSG00000118515 SGK1 -911086 sc-eQTL 5.31e-01 -0.0838 0.133 0.903 B_Memory L2
ENSG00000146409 SLC18B1 593687 sc-eQTL 6.47e-01 0.0697 0.152 0.903 B_Memory L2
ENSG00000028839 TBPL1 -545144 sc-eQTL 1.91e-02 -0.349 0.148 0.904 B_Naive1 L2
ENSG00000079950 STX7 893828 sc-eQTL 1.55e-01 0.102 0.0716 0.904 B_Naive1 L2
ENSG00000112303 VNN2 643567 sc-eQTL 2.16e-01 -0.173 0.139 0.904 B_Naive1 L2
ENSG00000112306 RPS12 592457 sc-eQTL 1.15e-01 0.125 0.0791 0.904 B_Naive1 L2
ENSG00000118515 SGK1 -911086 sc-eQTL 7.84e-01 0.0341 0.124 0.904 B_Naive1 L2
ENSG00000146409 SLC18B1 593687 sc-eQTL 8.09e-01 0.0372 0.154 0.904 B_Naive1 L2
ENSG00000028839 TBPL1 -545144 sc-eQTL 3.28e-02 -0.343 0.16 0.903 B_Naive2 L2
ENSG00000079950 STX7 893828 sc-eQTL 3.42e-01 0.0814 0.0855 0.903 B_Naive2 L2
ENSG00000112303 VNN2 643567 sc-eQTL 9.04e-01 0.019 0.157 0.903 B_Naive2 L2
ENSG00000112306 RPS12 592457 sc-eQTL 5.68e-02 0.158 0.0826 0.903 B_Naive2 L2
ENSG00000118515 SGK1 -911086 sc-eQTL 5.53e-01 0.0873 0.147 0.903 B_Naive2 L2
ENSG00000146409 SLC18B1 593687 sc-eQTL 2.31e-01 -0.19 0.158 0.903 B_Naive2 L2
ENSG00000028839 TBPL1 -545144 sc-eQTL 9.49e-01 0.00987 0.154 0.9 CD4_CTL L2
ENSG00000079950 STX7 893828 sc-eQTL 5.75e-01 -0.0858 0.153 0.9 CD4_CTL L2
ENSG00000112303 VNN2 643567 sc-eQTL 6.30e-01 -0.0746 0.154 0.9 CD4_CTL L2
ENSG00000112306 RPS12 592457 sc-eQTL 6.54e-01 0.032 0.0713 0.9 CD4_CTL L2
ENSG00000118515 SGK1 -911086 sc-eQTL 1.72e-01 -0.169 0.123 0.9 CD4_CTL L2
ENSG00000146409 SLC18B1 593687 sc-eQTL 8.09e-01 0.0349 0.144 0.9 CD4_CTL L2
ENSG00000028839 TBPL1 -545144 sc-eQTL 1.09e-01 -0.201 0.125 0.904 CD4_Naive L2
ENSG00000079950 STX7 893828 sc-eQTL 3.66e-01 -0.111 0.123 0.904 CD4_Naive L2
ENSG00000112303 VNN2 643567 sc-eQTL 5.16e-01 -0.0741 0.114 0.904 CD4_Naive L2
ENSG00000112306 RPS12 592457 sc-eQTL 8.60e-01 0.0131 0.0739 0.904 CD4_Naive L2
ENSG00000118515 SGK1 -911086 sc-eQTL 9.08e-01 -0.0104 0.0905 0.904 CD4_Naive L2
ENSG00000146409 SLC18B1 593687 sc-eQTL 5.17e-02 -0.276 0.141 0.904 CD4_Naive L2
ENSG00000028839 TBPL1 -545144 sc-eQTL 8.94e-01 0.0178 0.134 0.904 CD4_TCM L2
ENSG00000079950 STX7 893828 sc-eQTL 6.09e-01 -0.0691 0.135 0.904 CD4_TCM L2
ENSG00000112303 VNN2 643567 sc-eQTL 8.12e-01 -0.0317 0.133 0.904 CD4_TCM L2
ENSG00000112306 RPS12 592457 sc-eQTL 4.90e-01 0.0477 0.0689 0.904 CD4_TCM L2
ENSG00000118515 SGK1 -911086 sc-eQTL 4.48e-01 -0.0732 0.0964 0.904 CD4_TCM L2
ENSG00000146409 SLC18B1 593687 sc-eQTL 3.28e-01 -0.156 0.159 0.904 CD4_TCM L2
ENSG00000028839 TBPL1 -545144 sc-eQTL 3.59e-01 0.143 0.156 0.904 CD4_TEM L2
ENSG00000079950 STX7 893828 sc-eQTL 2.76e-01 -0.17 0.156 0.904 CD4_TEM L2
ENSG00000112303 VNN2 643567 sc-eQTL 5.89e-01 -0.0812 0.15 0.904 CD4_TEM L2
ENSG00000112306 RPS12 592457 sc-eQTL 9.07e-01 0.00717 0.0615 0.904 CD4_TEM L2
ENSG00000118515 SGK1 -911086 sc-eQTL 4.31e-01 -0.0833 0.106 0.904 CD4_TEM L2
ENSG00000146409 SLC18B1 593687 sc-eQTL 6.78e-01 0.0635 0.153 0.904 CD4_TEM L2
ENSG00000028839 TBPL1 -545144 sc-eQTL 8.01e-01 0.0348 0.138 0.904 CD8_CTL L2
ENSG00000079950 STX7 893828 sc-eQTL 5.48e-01 -0.0777 0.129 0.904 CD8_CTL L2
ENSG00000112303 VNN2 643567 sc-eQTL 8.85e-01 -0.0213 0.147 0.904 CD8_CTL L2
ENSG00000112306 RPS12 592457 sc-eQTL 7.88e-01 0.0212 0.0786 0.904 CD8_CTL L2
ENSG00000118515 SGK1 -911086 sc-eQTL 9.21e-01 -0.0132 0.133 0.904 CD8_CTL L2
ENSG00000146409 SLC18B1 593687 sc-eQTL 1.07e-01 -0.245 0.151 0.904 CD8_CTL L2
ENSG00000028839 TBPL1 -545144 sc-eQTL 5.09e-02 -0.285 0.145 0.904 CD8_Naive L2
ENSG00000079950 STX7 893828 sc-eQTL 2.70e-01 -0.172 0.155 0.904 CD8_Naive L2
ENSG00000112303 VNN2 643567 sc-eQTL 7.20e-02 -0.241 0.133 0.904 CD8_Naive L2
ENSG00000112306 RPS12 592457 sc-eQTL 7.82e-02 0.135 0.0764 0.904 CD8_Naive L2
ENSG00000118515 SGK1 -911086 sc-eQTL 7.30e-01 -0.0334 0.0966 0.904 CD8_Naive L2
ENSG00000146409 SLC18B1 593687 sc-eQTL 8.39e-01 -0.0314 0.154 0.904 CD8_Naive L2
ENSG00000028839 TBPL1 -545144 sc-eQTL 4.97e-02 -0.324 0.164 0.903 CD8_TCM L2
ENSG00000079950 STX7 893828 sc-eQTL 8.23e-01 0.0343 0.153 0.903 CD8_TCM L2
ENSG00000112303 VNN2 643567 sc-eQTL 8.50e-01 0.0289 0.152 0.903 CD8_TCM L2
ENSG00000112306 RPS12 592457 sc-eQTL 6.47e-01 0.034 0.0741 0.903 CD8_TCM L2
ENSG00000118515 SGK1 -911086 sc-eQTL 4.59e-01 -0.0911 0.123 0.903 CD8_TCM L2
ENSG00000146409 SLC18B1 593687 sc-eQTL 3.43e-01 -0.154 0.162 0.903 CD8_TCM L2
ENSG00000028839 TBPL1 -545144 sc-eQTL 5.77e-01 -0.0839 0.15 0.9 CD8_TEM L2
ENSG00000079950 STX7 893828 sc-eQTL 9.12e-01 0.0181 0.164 0.9 CD8_TEM L2
ENSG00000112303 VNN2 643567 sc-eQTL 5.90e-01 -0.0879 0.163 0.9 CD8_TEM L2
ENSG00000112306 RPS12 592457 sc-eQTL 9.22e-01 0.00855 0.0877 0.9 CD8_TEM L2
ENSG00000118515 SGK1 -911086 sc-eQTL 1.96e-01 -0.186 0.143 0.9 CD8_TEM L2
ENSG00000146409 SLC18B1 593687 sc-eQTL 6.81e-01 0.0681 0.166 0.9 CD8_TEM L2
ENSG00000028839 TBPL1 -545144 sc-eQTL 7.11e-01 -0.0576 0.155 0.903 MAIT L2
ENSG00000079950 STX7 893828 sc-eQTL 2.59e-01 -0.166 0.147 0.903 MAIT L2
ENSG00000112303 VNN2 643567 sc-eQTL 5.26e-01 -0.0951 0.15 0.903 MAIT L2
ENSG00000112306 RPS12 592457 sc-eQTL 9.11e-01 0.00825 0.0738 0.903 MAIT L2
ENSG00000118515 SGK1 -911086 sc-eQTL 4.69e-01 -0.0752 0.104 0.903 MAIT L2
ENSG00000146409 SLC18B1 593687 sc-eQTL 2.80e-02 -0.338 0.153 0.903 MAIT L2
ENSG00000028839 TBPL1 -545144 sc-eQTL 7.68e-01 0.0489 0.166 0.902 NK_CD56bright L2
ENSG00000079950 STX7 893828 sc-eQTL 8.07e-01 -0.0375 0.154 0.902 NK_CD56bright L2
ENSG00000112303 VNN2 643567 sc-eQTL 1.69e-01 -0.214 0.156 0.902 NK_CD56bright L2
ENSG00000112306 RPS12 592457 sc-eQTL 9.84e-02 -0.144 0.0865 0.902 NK_CD56bright L2
ENSG00000118515 SGK1 -911086 sc-eQTL 7.33e-01 0.0444 0.13 0.902 NK_CD56bright L2
ENSG00000028839 TBPL1 -545144 sc-eQTL 9.69e-02 0.23 0.138 0.903 NK_CD56dim L2
ENSG00000079950 STX7 893828 sc-eQTL 3.24e-01 0.126 0.127 0.903 NK_CD56dim L2
ENSG00000112303 VNN2 643567 sc-eQTL 2.84e-01 0.17 0.159 0.903 NK_CD56dim L2
ENSG00000112306 RPS12 592457 sc-eQTL 8.58e-01 -0.0113 0.0632 0.903 NK_CD56dim L2
ENSG00000118515 SGK1 -911086 sc-eQTL 2.80e-01 -0.151 0.14 0.903 NK_CD56dim L2
ENSG00000028839 TBPL1 -545144 sc-eQTL 6.01e-01 0.0904 0.173 0.904 NK_HLA L2
ENSG00000079950 STX7 893828 sc-eQTL 6.34e-01 0.0749 0.157 0.904 NK_HLA L2
ENSG00000112303 VNN2 643567 sc-eQTL 4.39e-01 -0.123 0.159 0.904 NK_HLA L2
ENSG00000112306 RPS12 592457 sc-eQTL 3.18e-01 -0.0741 0.074 0.904 NK_HLA L2
ENSG00000118515 SGK1 -911086 sc-eQTL 4.65e-01 -0.107 0.146 0.904 NK_HLA L2
ENSG00000028839 TBPL1 -545144 sc-eQTL 7.72e-01 0.0421 0.145 0.903 NK_cytokine L2
ENSG00000079950 STX7 893828 sc-eQTL 7.98e-02 0.246 0.139 0.903 NK_cytokine L2
ENSG00000112303 VNN2 643567 sc-eQTL 8.50e-01 -0.0298 0.158 0.903 NK_cytokine L2
ENSG00000112306 RPS12 592457 sc-eQTL 3.60e-01 -0.0785 0.0856 0.903 NK_cytokine L2
ENSG00000118515 SGK1 -911086 sc-eQTL 6.16e-01 -0.0716 0.143 0.903 NK_cytokine L2
ENSG00000028839 TBPL1 -545144 sc-eQTL 8.27e-01 -0.0457 0.208 0.915 PB L2
ENSG00000079950 STX7 893828 sc-eQTL 5.45e-01 -0.09 0.148 0.915 PB L2
ENSG00000112303 VNN2 643567 sc-eQTL 3.91e-01 -0.156 0.181 0.915 PB L2
ENSG00000112306 RPS12 592457 sc-eQTL 9.97e-01 0.000434 0.103 0.915 PB L2
ENSG00000118515 SGK1 -911086 sc-eQTL 7.45e-01 0.0541 0.166 0.915 PB L2
ENSG00000146409 SLC18B1 593687 sc-eQTL 5.16e-01 -0.125 0.193 0.915 PB L2
ENSG00000028839 TBPL1 -545144 sc-eQTL 1.47e-01 0.234 0.161 0.907 Pro_T L2
ENSG00000079950 STX7 893828 sc-eQTL 4.48e-01 0.11 0.144 0.907 Pro_T L2
ENSG00000112303 VNN2 643567 sc-eQTL 6.36e-01 0.0733 0.155 0.907 Pro_T L2
ENSG00000112306 RPS12 592457 sc-eQTL 1.99e-01 -0.0753 0.0584 0.907 Pro_T L2
ENSG00000118515 SGK1 -911086 sc-eQTL 5.60e-01 0.0685 0.117 0.907 Pro_T L2
ENSG00000146409 SLC18B1 593687 sc-eQTL 5.50e-01 0.0908 0.152 0.907 Pro_T L2
ENSG00000028839 TBPL1 -545144 sc-eQTL 4.03e-01 -0.133 0.159 0.904 Treg L2
ENSG00000079950 STX7 893828 sc-eQTL 6.11e-01 0.0763 0.15 0.904 Treg L2
ENSG00000112303 VNN2 643567 sc-eQTL 3.69e-01 0.113 0.126 0.904 Treg L2
ENSG00000112306 RPS12 592457 sc-eQTL 8.32e-01 -0.0118 0.0557 0.904 Treg L2
ENSG00000118515 SGK1 -911086 sc-eQTL 3.69e-01 0.106 0.117 0.904 Treg L2
ENSG00000146409 SLC18B1 593687 sc-eQTL 3.21e-01 -0.156 0.157 0.904 Treg L2
ENSG00000028839 TBPL1 -545144 sc-eQTL 1.66e-01 -0.227 0.163 0.895 cDC L2
ENSG00000079950 STX7 893828 sc-eQTL 6.66e-01 0.0556 0.129 0.895 cDC L2
ENSG00000093134 VNN3 672261 sc-eQTL 3.98e-01 -0.108 0.128 0.895 cDC L2
ENSG00000112299 VNN1 692971 sc-eQTL 9.74e-01 0.00495 0.15 0.895 cDC L2
ENSG00000112303 VNN2 643567 sc-eQTL 6.61e-02 -0.268 0.145 0.895 cDC L2
ENSG00000112306 RPS12 592457 sc-eQTL 6.79e-01 0.03 0.0723 0.895 cDC L2
ENSG00000118515 SGK1 -911086 sc-eQTL 5.29e-04 -0.416 0.118 0.895 cDC L2
ENSG00000146409 SLC18B1 593687 sc-eQTL 1.83e-01 -0.191 0.143 0.895 cDC L2
ENSG00000286438 AL591115.1 303898 sc-eQTL 2.17e-01 -0.141 0.114 0.895 cDC L2
ENSG00000286887 AL355881.1 -889275 sc-eQTL 5.61e-01 -0.0819 0.141 0.895 cDC L2
ENSG00000028839 TBPL1 -545144 sc-eQTL 9.43e-01 0.00937 0.131 0.904 cMono_IL1B L2
ENSG00000079950 STX7 893828 sc-eQTL 7.96e-01 0.0257 0.0995 0.904 cMono_IL1B L2
ENSG00000093134 VNN3 672261 sc-eQTL 9.59e-01 -0.00724 0.141 0.904 cMono_IL1B L2
ENSG00000112299 VNN1 692971 sc-eQTL 9.09e-01 -0.0163 0.142 0.904 cMono_IL1B L2
ENSG00000112303 VNN2 643567 sc-eQTL 3.71e-01 -0.102 0.113 0.904 cMono_IL1B L2
ENSG00000112306 RPS12 592457 sc-eQTL 6.39e-01 -0.0296 0.063 0.904 cMono_IL1B L2
ENSG00000118515 SGK1 -911086 sc-eQTL 1.71e-01 -0.129 0.0936 0.904 cMono_IL1B L2
ENSG00000146409 SLC18B1 593687 sc-eQTL 7.40e-01 0.0404 0.122 0.904 cMono_IL1B L2
ENSG00000286887 AL355881.1 -889275 sc-eQTL 3.24e-01 -0.125 0.126 0.904 cMono_IL1B L2
ENSG00000028839 TBPL1 -545144 sc-eQTL 9.17e-01 0.0156 0.149 0.904 cMono_S100A L2
ENSG00000079950 STX7 893828 sc-eQTL 3.12e-02 0.231 0.107 0.904 cMono_S100A L2
ENSG00000093134 VNN3 672261 sc-eQTL 7.11e-01 0.05 0.135 0.904 cMono_S100A L2
ENSG00000112299 VNN1 692971 sc-eQTL 4.39e-01 0.113 0.146 0.904 cMono_S100A L2
ENSG00000112303 VNN2 643567 sc-eQTL 1.27e-01 -0.146 0.0952 0.904 cMono_S100A L2
ENSG00000112306 RPS12 592457 sc-eQTL 8.99e-01 0.00877 0.0689 0.904 cMono_S100A L2
ENSG00000118515 SGK1 -911086 sc-eQTL 7.86e-01 -0.0215 0.0788 0.904 cMono_S100A L2
ENSG00000146409 SLC18B1 593687 sc-eQTL 2.43e-01 -0.149 0.127 0.904 cMono_S100A L2
ENSG00000286887 AL355881.1 -889275 sc-eQTL 5.24e-02 -0.241 0.124 0.904 cMono_S100A L2
ENSG00000028839 TBPL1 -545144 sc-eQTL 9.14e-01 0.022 0.202 0.903 gdT L2
ENSG00000079950 STX7 893828 sc-eQTL 3.52e-01 0.162 0.173 0.903 gdT L2
ENSG00000112303 VNN2 643567 sc-eQTL 2.79e-01 -0.208 0.192 0.903 gdT L2
ENSG00000112306 RPS12 592457 sc-eQTL 6.49e-01 0.0335 0.0733 0.903 gdT L2
ENSG00000118515 SGK1 -911086 sc-eQTL 7.87e-01 0.0375 0.138 0.903 gdT L2
ENSG00000146409 SLC18B1 593687 sc-eQTL 4.29e-01 -0.15 0.189 0.903 gdT L2
ENSG00000028839 TBPL1 -545144 sc-eQTL 6.12e-01 0.0768 0.151 0.9 intMono L2
ENSG00000079950 STX7 893828 sc-eQTL 4.04e-01 0.121 0.144 0.9 intMono L2
ENSG00000093134 VNN3 672261 sc-eQTL 9.87e-01 -0.00234 0.146 0.9 intMono L2
ENSG00000112299 VNN1 692971 sc-eQTL 5.58e-01 0.0845 0.144 0.9 intMono L2
ENSG00000112303 VNN2 643567 sc-eQTL 2.10e-01 -0.184 0.146 0.9 intMono L2
ENSG00000112306 RPS12 592457 sc-eQTL 8.55e-02 -0.109 0.0633 0.9 intMono L2
ENSG00000118515 SGK1 -911086 sc-eQTL 7.14e-01 -0.0393 0.107 0.9 intMono L2
ENSG00000146409 SLC18B1 593687 sc-eQTL 9.31e-03 -0.401 0.153 0.9 intMono L2
ENSG00000286887 AL355881.1 -889275 sc-eQTL 1.08e-01 -0.238 0.148 0.9 intMono L2
ENSG00000028839 TBPL1 -545144 sc-eQTL 4.24e-01 -0.128 0.16 0.903 ncMono L2
ENSG00000079950 STX7 893828 sc-eQTL 6.60e-01 -0.0477 0.108 0.903 ncMono L2
ENSG00000093134 VNN3 672261 sc-eQTL 3.13e-03 -0.448 0.15 0.903 ncMono L2
ENSG00000112299 VNN1 692971 sc-eQTL 9.64e-01 -0.00683 0.152 0.903 ncMono L2
ENSG00000112303 VNN2 643567 sc-eQTL 2.92e-02 -0.317 0.144 0.903 ncMono L2
ENSG00000112306 RPS12 592457 sc-eQTL 2.86e-01 0.0781 0.073 0.903 ncMono L2
ENSG00000118515 SGK1 -911086 sc-eQTL 5.67e-01 -0.0593 0.104 0.903 ncMono L2
ENSG00000146409 SLC18B1 593687 sc-eQTL 3.51e-01 0.121 0.129 0.903 ncMono L2
ENSG00000286887 AL355881.1 -889275 sc-eQTL 4.36e-01 0.107 0.137 0.903 ncMono L2
ENSG00000028839 TBPL1 -545144 sc-eQTL 6.13e-01 0.0941 0.186 0.898 pDC L2
ENSG00000079950 STX7 893828 sc-eQTL 3.24e-01 -0.122 0.123 0.898 pDC L2
ENSG00000093134 VNN3 672261 sc-eQTL 1.98e-01 -0.16 0.124 0.898 pDC L2
ENSG00000112299 VNN1 692971 sc-eQTL 2.30e-01 -0.152 0.126 0.898 pDC L2
ENSG00000112303 VNN2 643567 sc-eQTL 2.54e-01 0.172 0.15 0.898 pDC L2
ENSG00000112306 RPS12 592457 sc-eQTL 1.60e-02 -0.249 0.102 0.898 pDC L2
ENSG00000118515 SGK1 -911086 sc-eQTL 5.72e-01 -0.0598 0.106 0.898 pDC L2
ENSG00000146409 SLC18B1 593687 sc-eQTL 4.23e-01 -0.124 0.154 0.898 pDC L2
ENSG00000286438 AL591115.1 303898 sc-eQTL 8.86e-01 -0.0212 0.147 0.898 pDC L2
ENSG00000286887 AL355881.1 -889275 sc-eQTL 7.32e-01 0.0448 0.131 0.898 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -545144 sc-eQTL 2.46e-01 0.185 0.159 0.904 B_Memory LOneK1K
ENSG00000079950 STX7 893828 sc-eQTL 9.42e-03 0.226 0.0863 0.904 B_Memory LOneK1K
ENSG00000112303 VNN2 643567 sc-eQTL 5.32e-01 -0.0868 0.139 0.904 B_Memory LOneK1K
ENSG00000112306 RPS12 592457 sc-eQTL 2.08e-01 0.0994 0.0787 0.904 B_Memory LOneK1K
ENSG00000118515 SGK1 -911086 sc-eQTL 2.65e-01 -0.138 0.123 0.904 B_Memory LOneK1K
ENSG00000146409 SLC18B1 593687 sc-eQTL 8.33e-01 0.0306 0.145 0.904 B_Memory LOneK1K
ENSG00000028839 TBPL1 -545144 sc-eQTL 3.40e-04 -0.534 0.147 0.904 B_Naive LOneK1K
ENSG00000079950 STX7 893828 sc-eQTL 5.84e-02 0.129 0.0676 0.904 B_Naive LOneK1K
ENSG00000112303 VNN2 643567 sc-eQTL 3.15e-01 -0.133 0.132 0.904 B_Naive LOneK1K
ENSG00000112306 RPS12 592457 sc-eQTL 1.24e-01 0.123 0.0796 0.904 B_Naive LOneK1K
ENSG00000118515 SGK1 -911086 sc-eQTL 9.29e-01 0.011 0.124 0.904 B_Naive LOneK1K
ENSG00000146409 SLC18B1 593687 sc-eQTL 5.72e-01 -0.0853 0.151 0.904 B_Naive LOneK1K
ENSG00000028839 TBPL1 -545144 sc-eQTL 7.66e-01 0.0356 0.119 0.904 CD14_Mono LOneK1K
ENSG00000079950 STX7 893828 sc-eQTL 1.47e-01 0.12 0.0827 0.904 CD14_Mono LOneK1K
ENSG00000093134 VNN3 672261 sc-eQTL 9.63e-01 0.00623 0.135 0.904 CD14_Mono LOneK1K
ENSG00000112299 VNN1 692971 sc-eQTL 7.85e-01 0.0386 0.141 0.904 CD14_Mono LOneK1K
ENSG00000112303 VNN2 643567 sc-eQTL 1.66e-01 -0.129 0.0929 0.904 CD14_Mono LOneK1K
ENSG00000112306 RPS12 592457 sc-eQTL 5.64e-01 -0.0369 0.064 0.904 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -911086 sc-eQTL 2.23e-01 -0.106 0.0869 0.904 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 593687 sc-eQTL 6.35e-01 -0.0541 0.114 0.904 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -889275 sc-eQTL 7.33e-02 -0.213 0.119 0.904 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -545144 sc-eQTL 9.89e-01 -0.00222 0.155 0.903 CD16_Mono LOneK1K
ENSG00000079950 STX7 893828 sc-eQTL 4.95e-01 0.0697 0.102 0.903 CD16_Mono LOneK1K
ENSG00000093134 VNN3 672261 sc-eQTL 1.32e-01 -0.226 0.149 0.903 CD16_Mono LOneK1K
ENSG00000112299 VNN1 692971 sc-eQTL 9.64e-01 -0.00663 0.149 0.903 CD16_Mono LOneK1K
ENSG00000112303 VNN2 643567 sc-eQTL 1.44e-01 -0.205 0.14 0.903 CD16_Mono LOneK1K
ENSG00000112306 RPS12 592457 sc-eQTL 5.40e-01 0.0365 0.0595 0.903 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -911086 sc-eQTL 5.60e-01 -0.0526 0.0901 0.903 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 593687 sc-eQTL 8.14e-02 -0.251 0.144 0.903 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -889275 sc-eQTL 3.80e-01 -0.115 0.13 0.903 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -545144 sc-eQTL 1.88e-01 0.168 0.127 0.903 NK_CD56dim LOneK1K
ENSG00000079950 STX7 893828 sc-eQTL 6.33e-02 0.222 0.119 0.903 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 643567 sc-eQTL 7.24e-01 0.0535 0.152 0.903 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 592457 sc-eQTL 9.45e-01 -0.00429 0.0619 0.903 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -911086 sc-eQTL 3.64e-01 -0.116 0.128 0.903 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079950 STX7 893828 pQTL 0.0289 -0.0895 0.0409 0.0 0.0 0.0791
ENSG00000112299 VNN1 692971 pQTL 0.00492 0.178 0.0632 0.0 0.0 0.0791
ENSG00000146409 SLC18B1 593687 eQTL 0.0152 -0.0951 0.0391 0.0 0.0 0.08

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079950 STX7 893828 2.74e-07 1.3e-07 3.88e-08 1.84e-07 9.16e-08 9.8e-08 1.53e-07 5.4e-08 1.45e-07 4.94e-08 1.54e-07 8.68e-08 1.47e-07 6.76e-08 6.02e-08 7.53e-08 3.87e-08 1.27e-07 5.39e-08 4.45e-08 1.08e-07 1.27e-07 1.39e-07 3.42e-08 1.5e-07 1.14e-07 1.07e-07 9.65e-08 1.12e-07 1.02e-07 9.92e-08 3.89e-08 3.35e-08 8.44e-08 7.51e-08 3.93e-08 5.02e-08 9.23e-08 6.55e-08 3.98e-08 4.88e-08 1.36e-07 4.52e-08 1.07e-08 5.43e-08 1.99e-08 1.19e-07 3.89e-09 4.79e-08