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Genes within 1Mb (chr6:133406283:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -545887 sc-eQTL 6.67e-02 -0.159 0.0861 0.476 B L1
ENSG00000079950 STX7 893085 sc-eQTL 4.79e-01 -0.0245 0.0345 0.476 B L1
ENSG00000112303 VNN2 642824 sc-eQTL 5.28e-01 -0.041 0.0649 0.476 B L1
ENSG00000112306 RPS12 591714 sc-eQTL 7.96e-01 -0.0102 0.0393 0.476 B L1
ENSG00000118515 SGK1 -911829 sc-eQTL 6.34e-01 0.0288 0.0606 0.476 B L1
ENSG00000146409 SLC18B1 592944 sc-eQTL 2.29e-01 0.0993 0.0824 0.476 B L1
ENSG00000028839 TBPL1 -545887 sc-eQTL 1.43e-02 -0.155 0.0629 0.476 CD4T L1
ENSG00000079950 STX7 893085 sc-eQTL 4.21e-02 -0.134 0.0657 0.476 CD4T L1
ENSG00000112303 VNN2 642824 sc-eQTL 1.74e-01 -0.078 0.0572 0.476 CD4T L1
ENSG00000112306 RPS12 591714 sc-eQTL 2.93e-01 0.0411 0.039 0.476 CD4T L1
ENSG00000118515 SGK1 -911829 sc-eQTL 6.41e-01 0.0245 0.0525 0.476 CD4T L1
ENSG00000146409 SLC18B1 592944 sc-eQTL 9.22e-01 0.00775 0.0791 0.476 CD4T L1
ENSG00000028839 TBPL1 -545887 sc-eQTL 4.62e-03 -0.179 0.0627 0.476 CD8T L1
ENSG00000079950 STX7 893085 sc-eQTL 1.57e-02 -0.16 0.0658 0.476 CD8T L1
ENSG00000112303 VNN2 642824 sc-eQTL 5.46e-01 -0.0471 0.0778 0.476 CD8T L1
ENSG00000112306 RPS12 591714 sc-eQTL 7.26e-01 0.00932 0.0266 0.476 CD8T L1
ENSG00000118515 SGK1 -911829 sc-eQTL 7.82e-01 -0.0114 0.041 0.476 CD8T L1
ENSG00000146409 SLC18B1 592944 sc-eQTL 1.98e-01 0.103 0.0801 0.476 CD8T L1
ENSG00000028839 TBPL1 -545887 sc-eQTL 9.10e-01 -0.011 0.0967 0.475 DC L1
ENSG00000079950 STX7 893085 sc-eQTL 3.23e-02 -0.128 0.0594 0.475 DC L1
ENSG00000093134 VNN3 671518 sc-eQTL 5.77e-01 0.0416 0.0744 0.475 DC L1
ENSG00000112299 VNN1 692228 sc-eQTL 6.35e-01 0.0382 0.0804 0.475 DC L1
ENSG00000112303 VNN2 642824 sc-eQTL 6.63e-01 -0.0375 0.086 0.475 DC L1
ENSG00000112306 RPS12 591714 sc-eQTL 1.44e-01 0.0704 0.048 0.475 DC L1
ENSG00000118515 SGK1 -911829 sc-eQTL 8.14e-02 -0.0973 0.0556 0.475 DC L1
ENSG00000146409 SLC18B1 592944 sc-eQTL 4.39e-01 0.0592 0.0762 0.475 DC L1
ENSG00000286438 AL591115.1 303155 sc-eQTL 4.73e-01 -0.0499 0.0694 0.475 DC L1
ENSG00000286887 AL355881.1 -890018 sc-eQTL 6.11e-01 -0.0441 0.0866 0.475 DC L1
ENSG00000028839 TBPL1 -545887 sc-eQTL 4.42e-01 0.0516 0.067 0.476 Mono L1
ENSG00000079950 STX7 893085 sc-eQTL 9.62e-01 -0.00212 0.0449 0.476 Mono L1
ENSG00000093134 VNN3 671518 sc-eQTL 4.78e-01 -0.0547 0.077 0.476 Mono L1
ENSG00000112299 VNN1 692228 sc-eQTL 1.36e-01 -0.123 0.0825 0.476 Mono L1
ENSG00000112303 VNN2 642824 sc-eQTL 9.64e-01 -0.00262 0.0585 0.476 Mono L1
ENSG00000112306 RPS12 591714 sc-eQTL 6.08e-01 0.018 0.035 0.476 Mono L1
ENSG00000118515 SGK1 -911829 sc-eQTL 1.81e-02 -0.116 0.0489 0.476 Mono L1
ENSG00000146409 SLC18B1 592944 sc-eQTL 6.11e-01 0.0354 0.0693 0.476 Mono L1
ENSG00000286887 AL355881.1 -890018 sc-eQTL 1.85e-01 -0.0903 0.0679 0.476 Mono L1
ENSG00000028839 TBPL1 -545887 sc-eQTL 9.84e-01 0.00152 0.0739 0.476 NK L1
ENSG00000079950 STX7 893085 sc-eQTL 1.46e-01 -0.0992 0.068 0.476 NK L1
ENSG00000112303 VNN2 642824 sc-eQTL 5.21e-01 -0.0546 0.085 0.476 NK L1
ENSG00000112306 RPS12 591714 sc-eQTL 5.03e-01 0.0236 0.0352 0.476 NK L1
ENSG00000118515 SGK1 -911829 sc-eQTL 4.18e-01 0.0527 0.065 0.476 NK L1
ENSG00000028839 TBPL1 -545887 sc-eQTL 1.10e-01 0.139 0.0866 0.476 Other_T L1
ENSG00000079950 STX7 893085 sc-eQTL 1.69e-01 -0.0942 0.0683 0.476 Other_T L1
ENSG00000112303 VNN2 642824 sc-eQTL 6.89e-01 0.0332 0.0829 0.476 Other_T L1
ENSG00000112306 RPS12 591714 sc-eQTL 3.70e-01 0.0295 0.0328 0.476 Other_T L1
ENSG00000118515 SGK1 -911829 sc-eQTL 9.68e-01 0.00242 0.0605 0.476 Other_T L1
ENSG00000146409 SLC18B1 592944 sc-eQTL 7.07e-02 -0.162 0.0894 0.476 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -545887 sc-eQTL 4.88e-01 0.0713 0.102 0.495 B_Activated L2
ENSG00000079950 STX7 893085 sc-eQTL 8.64e-01 -0.0151 0.0879 0.495 B_Activated L2
ENSG00000112303 VNN2 642824 sc-eQTL 7.44e-01 0.0305 0.0935 0.495 B_Activated L2
ENSG00000112306 RPS12 591714 sc-eQTL 9.10e-01 -0.00569 0.0501 0.495 B_Activated L2
ENSG00000118515 SGK1 -911829 sc-eQTL 9.24e-01 -0.00854 0.0894 0.495 B_Activated L2
ENSG00000146409 SLC18B1 592944 sc-eQTL 6.44e-01 0.0406 0.0877 0.495 B_Activated L2
ENSG00000028839 TBPL1 -545887 sc-eQTL 2.90e-01 -0.103 0.0975 0.479 B_Intermediate L2
ENSG00000079950 STX7 893085 sc-eQTL 3.23e-02 -0.12 0.0556 0.479 B_Intermediate L2
ENSG00000112303 VNN2 642824 sc-eQTL 9.64e-01 -0.00377 0.0846 0.479 B_Intermediate L2
ENSG00000112306 RPS12 591714 sc-eQTL 7.46e-01 -0.0168 0.0518 0.479 B_Intermediate L2
ENSG00000118515 SGK1 -911829 sc-eQTL 2.90e-01 -0.0947 0.0893 0.479 B_Intermediate L2
ENSG00000146409 SLC18B1 592944 sc-eQTL 2.74e-01 0.102 0.0931 0.479 B_Intermediate L2
ENSG00000028839 TBPL1 -545887 sc-eQTL 8.67e-01 0.0157 0.0933 0.474 B_Memory L2
ENSG00000079950 STX7 893085 sc-eQTL 1.48e-01 -0.0975 0.0672 0.474 B_Memory L2
ENSG00000112303 VNN2 642824 sc-eQTL 1.95e-01 -0.114 0.088 0.474 B_Memory L2
ENSG00000112306 RPS12 591714 sc-eQTL 9.23e-01 0.0041 0.0426 0.474 B_Memory L2
ENSG00000118515 SGK1 -911829 sc-eQTL 1.26e-01 -0.119 0.0776 0.474 B_Memory L2
ENSG00000146409 SLC18B1 592944 sc-eQTL 1.14e-01 -0.14 0.0883 0.474 B_Memory L2
ENSG00000028839 TBPL1 -545887 sc-eQTL 1.48e-01 -0.127 0.0878 0.476 B_Naive1 L2
ENSG00000079950 STX7 893085 sc-eQTL 5.74e-01 -0.0238 0.0424 0.476 B_Naive1 L2
ENSG00000112303 VNN2 642824 sc-eQTL 1.67e-01 0.114 0.082 0.476 B_Naive1 L2
ENSG00000112306 RPS12 591714 sc-eQTL 9.73e-01 0.00156 0.0469 0.476 B_Naive1 L2
ENSG00000118515 SGK1 -911829 sc-eQTL 9.69e-01 -0.00284 0.0734 0.476 B_Naive1 L2
ENSG00000146409 SLC18B1 592944 sc-eQTL 4.72e-02 0.179 0.0896 0.476 B_Naive1 L2
ENSG00000028839 TBPL1 -545887 sc-eQTL 2.44e-01 -0.108 0.0926 0.474 B_Naive2 L2
ENSG00000079950 STX7 893085 sc-eQTL 9.08e-01 0.00568 0.0494 0.474 B_Naive2 L2
ENSG00000112303 VNN2 642824 sc-eQTL 1.48e-01 -0.131 0.0902 0.474 B_Naive2 L2
ENSG00000112306 RPS12 591714 sc-eQTL 6.31e-01 -0.0231 0.048 0.474 B_Naive2 L2
ENSG00000118515 SGK1 -911829 sc-eQTL 1.95e-01 0.11 0.0844 0.474 B_Naive2 L2
ENSG00000146409 SLC18B1 592944 sc-eQTL 9.93e-01 0.000786 0.0915 0.474 B_Naive2 L2
ENSG00000028839 TBPL1 -545887 sc-eQTL 9.04e-01 0.0112 0.0925 0.473 CD4_CTL L2
ENSG00000079950 STX7 893085 sc-eQTL 6.82e-01 -0.0377 0.0918 0.473 CD4_CTL L2
ENSG00000112303 VNN2 642824 sc-eQTL 1.21e-01 -0.144 0.0921 0.473 CD4_CTL L2
ENSG00000112306 RPS12 591714 sc-eQTL 2.27e-01 0.0517 0.0427 0.473 CD4_CTL L2
ENSG00000118515 SGK1 -911829 sc-eQTL 3.00e-01 -0.077 0.0741 0.473 CD4_CTL L2
ENSG00000146409 SLC18B1 592944 sc-eQTL 8.96e-01 -0.0113 0.0864 0.473 CD4_CTL L2
ENSG00000028839 TBPL1 -545887 sc-eQTL 3.19e-01 -0.0724 0.0725 0.476 CD4_Naive L2
ENSG00000079950 STX7 893085 sc-eQTL 4.15e-01 -0.0582 0.0712 0.476 CD4_Naive L2
ENSG00000112303 VNN2 642824 sc-eQTL 9.78e-02 -0.109 0.0656 0.476 CD4_Naive L2
ENSG00000112306 RPS12 591714 sc-eQTL 3.77e-01 0.0379 0.0428 0.476 CD4_Naive L2
ENSG00000118515 SGK1 -911829 sc-eQTL 4.74e-01 0.0376 0.0524 0.476 CD4_Naive L2
ENSG00000146409 SLC18B1 592944 sc-eQTL 7.80e-01 -0.0231 0.0825 0.476 CD4_Naive L2
ENSG00000028839 TBPL1 -545887 sc-eQTL 1.51e-01 -0.113 0.0784 0.476 CD4_TCM L2
ENSG00000079950 STX7 893085 sc-eQTL 3.03e-02 -0.171 0.0784 0.476 CD4_TCM L2
ENSG00000112303 VNN2 642824 sc-eQTL 2.43e-01 0.0913 0.0779 0.476 CD4_TCM L2
ENSG00000112306 RPS12 591714 sc-eQTL 2.56e-01 0.046 0.0404 0.476 CD4_TCM L2
ENSG00000118515 SGK1 -911829 sc-eQTL 3.73e-01 -0.0505 0.0566 0.476 CD4_TCM L2
ENSG00000146409 SLC18B1 592944 sc-eQTL 8.59e-01 0.0167 0.0939 0.476 CD4_TCM L2
ENSG00000028839 TBPL1 -545887 sc-eQTL 4.42e-01 -0.0703 0.0913 0.476 CD4_TEM L2
ENSG00000079950 STX7 893085 sc-eQTL 3.12e-01 -0.0926 0.0913 0.476 CD4_TEM L2
ENSG00000112303 VNN2 642824 sc-eQTL 9.19e-02 -0.148 0.0873 0.476 CD4_TEM L2
ENSG00000112306 RPS12 591714 sc-eQTL 2.11e-01 0.045 0.0359 0.476 CD4_TEM L2
ENSG00000118515 SGK1 -911829 sc-eQTL 4.78e-01 -0.0439 0.0619 0.476 CD4_TEM L2
ENSG00000146409 SLC18B1 592944 sc-eQTL 1.85e-01 -0.119 0.0892 0.476 CD4_TEM L2
ENSG00000028839 TBPL1 -545887 sc-eQTL 5.37e-01 -0.0497 0.0805 0.476 CD8_CTL L2
ENSG00000079950 STX7 893085 sc-eQTL 6.58e-02 -0.138 0.0747 0.476 CD8_CTL L2
ENSG00000112303 VNN2 642824 sc-eQTL 7.62e-01 -0.0259 0.0855 0.476 CD8_CTL L2
ENSG00000112306 RPS12 591714 sc-eQTL 6.69e-01 0.0196 0.0458 0.476 CD8_CTL L2
ENSG00000118515 SGK1 -911829 sc-eQTL 3.13e-01 -0.078 0.0771 0.476 CD8_CTL L2
ENSG00000146409 SLC18B1 592944 sc-eQTL 6.94e-01 0.0349 0.0887 0.476 CD8_CTL L2
ENSG00000028839 TBPL1 -545887 sc-eQTL 1.36e-01 -0.129 0.086 0.476 CD8_Naive L2
ENSG00000079950 STX7 893085 sc-eQTL 3.77e-02 -0.191 0.0911 0.476 CD8_Naive L2
ENSG00000112303 VNN2 642824 sc-eQTL 3.22e-01 -0.0787 0.0793 0.476 CD8_Naive L2
ENSG00000112306 RPS12 591714 sc-eQTL 4.55e-02 0.0907 0.0451 0.476 CD8_Naive L2
ENSG00000118515 SGK1 -911829 sc-eQTL 7.70e-01 0.0167 0.0571 0.476 CD8_Naive L2
ENSG00000146409 SLC18B1 592944 sc-eQTL 2.11e-01 0.114 0.0909 0.476 CD8_Naive L2
ENSG00000028839 TBPL1 -545887 sc-eQTL 8.16e-01 -0.023 0.0986 0.47 CD8_TCM L2
ENSG00000079950 STX7 893085 sc-eQTL 1.23e-01 -0.141 0.0907 0.47 CD8_TCM L2
ENSG00000112303 VNN2 642824 sc-eQTL 4.98e-01 0.0614 0.0905 0.47 CD8_TCM L2
ENSG00000112306 RPS12 591714 sc-eQTL 5.23e-01 0.0282 0.0441 0.47 CD8_TCM L2
ENSG00000118515 SGK1 -911829 sc-eQTL 6.65e-01 -0.0317 0.0731 0.47 CD8_TCM L2
ENSG00000146409 SLC18B1 592944 sc-eQTL 8.69e-01 -0.0159 0.0968 0.47 CD8_TCM L2
ENSG00000028839 TBPL1 -545887 sc-eQTL 5.14e-01 -0.0588 0.0899 0.477 CD8_TEM L2
ENSG00000079950 STX7 893085 sc-eQTL 1.53e-01 0.14 0.0977 0.477 CD8_TEM L2
ENSG00000112303 VNN2 642824 sc-eQTL 2.35e-01 -0.116 0.0973 0.477 CD8_TEM L2
ENSG00000112306 RPS12 591714 sc-eQTL 8.03e-01 -0.0131 0.0525 0.477 CD8_TEM L2
ENSG00000118515 SGK1 -911829 sc-eQTL 5.25e-02 -0.166 0.0853 0.477 CD8_TEM L2
ENSG00000146409 SLC18B1 592944 sc-eQTL 7.92e-01 -0.0262 0.0993 0.477 CD8_TEM L2
ENSG00000028839 TBPL1 -545887 sc-eQTL 2.94e-01 0.0955 0.0907 0.474 MAIT L2
ENSG00000079950 STX7 893085 sc-eQTL 1.68e-01 -0.119 0.086 0.474 MAIT L2
ENSG00000112303 VNN2 642824 sc-eQTL 8.26e-01 0.0193 0.0879 0.474 MAIT L2
ENSG00000112306 RPS12 591714 sc-eQTL 3.77e-01 0.0382 0.0431 0.474 MAIT L2
ENSG00000118515 SGK1 -911829 sc-eQTL 7.14e-01 0.0223 0.0608 0.474 MAIT L2
ENSG00000146409 SLC18B1 592944 sc-eQTL 5.91e-02 -0.17 0.0898 0.474 MAIT L2
ENSG00000028839 TBPL1 -545887 sc-eQTL 9.18e-01 -0.0103 0.0992 0.478 NK_CD56bright L2
ENSG00000079950 STX7 893085 sc-eQTL 3.32e-01 -0.0892 0.0917 0.478 NK_CD56bright L2
ENSG00000112303 VNN2 642824 sc-eQTL 8.04e-01 -0.0233 0.0934 0.478 NK_CD56bright L2
ENSG00000112306 RPS12 591714 sc-eQTL 6.78e-01 -0.0216 0.052 0.478 NK_CD56bright L2
ENSG00000118515 SGK1 -911829 sc-eQTL 4.79e-01 0.0551 0.0777 0.478 NK_CD56bright L2
ENSG00000028839 TBPL1 -545887 sc-eQTL 9.61e-02 0.131 0.0786 0.474 NK_CD56dim L2
ENSG00000079950 STX7 893085 sc-eQTL 3.85e-01 -0.0629 0.0723 0.474 NK_CD56dim L2
ENSG00000112303 VNN2 642824 sc-eQTL 8.53e-01 0.0168 0.0906 0.474 NK_CD56dim L2
ENSG00000112306 RPS12 591714 sc-eQTL 3.28e-01 0.0352 0.0359 0.474 NK_CD56dim L2
ENSG00000118515 SGK1 -911829 sc-eQTL 4.24e-01 -0.0637 0.0796 0.474 NK_CD56dim L2
ENSG00000028839 TBPL1 -545887 sc-eQTL 4.02e-01 -0.0832 0.0991 0.475 NK_HLA L2
ENSG00000079950 STX7 893085 sc-eQTL 5.88e-01 -0.0491 0.0903 0.475 NK_HLA L2
ENSG00000112303 VNN2 642824 sc-eQTL 9.79e-01 -0.00242 0.0915 0.475 NK_HLA L2
ENSG00000112306 RPS12 591714 sc-eQTL 8.43e-01 -0.00845 0.0426 0.475 NK_HLA L2
ENSG00000118515 SGK1 -911829 sc-eQTL 9.34e-01 0.00703 0.0843 0.475 NK_HLA L2
ENSG00000028839 TBPL1 -545887 sc-eQTL 1.37e-01 -0.123 0.0821 0.474 NK_cytokine L2
ENSG00000079950 STX7 893085 sc-eQTL 2.41e-01 -0.0937 0.0797 0.474 NK_cytokine L2
ENSG00000112303 VNN2 642824 sc-eQTL 1.66e-01 -0.125 0.0895 0.474 NK_cytokine L2
ENSG00000112306 RPS12 591714 sc-eQTL 7.56e-01 0.0152 0.0488 0.474 NK_cytokine L2
ENSG00000118515 SGK1 -911829 sc-eQTL 1.87e-02 0.19 0.0801 0.474 NK_cytokine L2
ENSG00000028839 TBPL1 -545887 sc-eQTL 7.67e-01 -0.0342 0.115 0.481 PB L2
ENSG00000079950 STX7 893085 sc-eQTL 4.19e-01 -0.0664 0.0819 0.481 PB L2
ENSG00000112303 VNN2 642824 sc-eQTL 4.61e-01 -0.0741 0.1 0.481 PB L2
ENSG00000112306 RPS12 591714 sc-eQTL 2.89e-01 0.0604 0.0567 0.481 PB L2
ENSG00000118515 SGK1 -911829 sc-eQTL 9.56e-01 0.00513 0.0921 0.481 PB L2
ENSG00000146409 SLC18B1 592944 sc-eQTL 8.07e-02 -0.186 0.105 0.481 PB L2
ENSG00000028839 TBPL1 -545887 sc-eQTL 1.84e-01 0.126 0.0946 0.48 Pro_T L2
ENSG00000079950 STX7 893085 sc-eQTL 4.45e-01 -0.0648 0.0847 0.48 Pro_T L2
ENSG00000112303 VNN2 642824 sc-eQTL 2.43e-01 0.106 0.0907 0.48 Pro_T L2
ENSG00000112306 RPS12 591714 sc-eQTL 8.08e-01 0.00836 0.0344 0.48 Pro_T L2
ENSG00000118515 SGK1 -911829 sc-eQTL 2.76e-01 -0.0752 0.0688 0.48 Pro_T L2
ENSG00000146409 SLC18B1 592944 sc-eQTL 1.03e-01 -0.145 0.0885 0.48 Pro_T L2
ENSG00000028839 TBPL1 -545887 sc-eQTL 4.82e-02 -0.183 0.0919 0.476 Treg L2
ENSG00000079950 STX7 893085 sc-eQTL 5.10e-01 -0.0577 0.0874 0.476 Treg L2
ENSG00000112303 VNN2 642824 sc-eQTL 8.85e-01 -0.0106 0.0736 0.476 Treg L2
ENSG00000112306 RPS12 591714 sc-eQTL 7.48e-01 -0.0105 0.0325 0.476 Treg L2
ENSG00000118515 SGK1 -911829 sc-eQTL 2.44e-01 -0.0799 0.0684 0.476 Treg L2
ENSG00000146409 SLC18B1 592944 sc-eQTL 9.66e-02 0.152 0.0914 0.476 Treg L2
ENSG00000028839 TBPL1 -545887 sc-eQTL 9.30e-01 0.00869 0.0985 0.476 cDC L2
ENSG00000079950 STX7 893085 sc-eQTL 3.31e-01 -0.0752 0.0772 0.476 cDC L2
ENSG00000093134 VNN3 671518 sc-eQTL 3.14e-01 -0.0774 0.0766 0.476 cDC L2
ENSG00000112299 VNN1 692228 sc-eQTL 5.68e-01 -0.0516 0.0903 0.476 cDC L2
ENSG00000112303 VNN2 642824 sc-eQTL 3.02e-01 -0.0909 0.0877 0.476 cDC L2
ENSG00000112306 RPS12 591714 sc-eQTL 1.81e-01 0.058 0.0432 0.476 cDC L2
ENSG00000118515 SGK1 -911829 sc-eQTL 4.73e-02 -0.145 0.0724 0.476 cDC L2
ENSG00000146409 SLC18B1 592944 sc-eQTL 5.65e-01 -0.0496 0.086 0.476 cDC L2
ENSG00000286438 AL591115.1 303155 sc-eQTL 9.60e-01 -0.00348 0.0688 0.476 cDC L2
ENSG00000286887 AL355881.1 -890018 sc-eQTL 5.60e-01 -0.0493 0.0846 0.476 cDC L2
ENSG00000028839 TBPL1 -545887 sc-eQTL 8.01e-01 0.0194 0.0765 0.476 cMono_IL1B L2
ENSG00000079950 STX7 893085 sc-eQTL 6.41e-01 -0.0271 0.0581 0.476 cMono_IL1B L2
ENSG00000093134 VNN3 671518 sc-eQTL 7.65e-01 -0.0246 0.0821 0.476 cMono_IL1B L2
ENSG00000112299 VNN1 692228 sc-eQTL 2.95e-02 -0.179 0.0819 0.476 cMono_IL1B L2
ENSG00000112303 VNN2 642824 sc-eQTL 5.14e-01 0.0432 0.0662 0.476 cMono_IL1B L2
ENSG00000112306 RPS12 591714 sc-eQTL 8.72e-01 0.00593 0.0368 0.476 cMono_IL1B L2
ENSG00000118515 SGK1 -911829 sc-eQTL 5.34e-02 -0.106 0.0544 0.476 cMono_IL1B L2
ENSG00000146409 SLC18B1 592944 sc-eQTL 6.32e-01 0.034 0.0709 0.476 cMono_IL1B L2
ENSG00000286887 AL355881.1 -890018 sc-eQTL 2.76e-01 -0.0805 0.0737 0.476 cMono_IL1B L2
ENSG00000028839 TBPL1 -545887 sc-eQTL 4.28e-01 0.0692 0.0871 0.476 cMono_S100A L2
ENSG00000079950 STX7 893085 sc-eQTL 5.21e-01 -0.0404 0.0629 0.476 cMono_S100A L2
ENSG00000093134 VNN3 671518 sc-eQTL 3.03e-01 -0.0811 0.0785 0.476 cMono_S100A L2
ENSG00000112299 VNN1 692228 sc-eQTL 4.21e-01 -0.0687 0.0853 0.476 cMono_S100A L2
ENSG00000112303 VNN2 642824 sc-eQTL 9.74e-01 -0.00182 0.056 0.476 cMono_S100A L2
ENSG00000112306 RPS12 591714 sc-eQTL 3.00e-01 0.0417 0.0402 0.476 cMono_S100A L2
ENSG00000118515 SGK1 -911829 sc-eQTL 1.81e-01 -0.0616 0.0459 0.476 cMono_S100A L2
ENSG00000146409 SLC18B1 592944 sc-eQTL 1.60e-01 0.105 0.0742 0.476 cMono_S100A L2
ENSG00000286887 AL355881.1 -890018 sc-eQTL 6.20e-01 -0.0362 0.0729 0.476 cMono_S100A L2
ENSG00000028839 TBPL1 -545887 sc-eQTL 1.67e-01 0.171 0.123 0.464 gdT L2
ENSG00000079950 STX7 893085 sc-eQTL 7.50e-01 -0.034 0.107 0.464 gdT L2
ENSG00000112303 VNN2 642824 sc-eQTL 7.22e-01 0.042 0.118 0.464 gdT L2
ENSG00000112306 RPS12 591714 sc-eQTL 2.18e-02 0.102 0.0441 0.464 gdT L2
ENSG00000118515 SGK1 -911829 sc-eQTL 2.68e-01 -0.094 0.0844 0.464 gdT L2
ENSG00000146409 SLC18B1 592944 sc-eQTL 4.07e-01 0.0963 0.116 0.464 gdT L2
ENSG00000028839 TBPL1 -545887 sc-eQTL 6.48e-01 0.0405 0.0885 0.478 intMono L2
ENSG00000079950 STX7 893085 sc-eQTL 1.81e-01 -0.113 0.0842 0.478 intMono L2
ENSG00000093134 VNN3 671518 sc-eQTL 2.45e-01 -0.0992 0.0851 0.478 intMono L2
ENSG00000112299 VNN1 692228 sc-eQTL 3.65e-01 -0.0766 0.0843 0.478 intMono L2
ENSG00000112303 VNN2 642824 sc-eQTL 3.14e-01 -0.0864 0.0856 0.478 intMono L2
ENSG00000112306 RPS12 591714 sc-eQTL 5.31e-01 0.0234 0.0373 0.478 intMono L2
ENSG00000118515 SGK1 -911829 sc-eQTL 2.58e-01 -0.071 0.0625 0.478 intMono L2
ENSG00000146409 SLC18B1 592944 sc-eQTL 6.51e-01 0.0411 0.0909 0.478 intMono L2
ENSG00000286887 AL355881.1 -890018 sc-eQTL 4.50e-01 -0.0657 0.0868 0.478 intMono L2
ENSG00000028839 TBPL1 -545887 sc-eQTL 3.04e-01 -0.0956 0.0928 0.486 ncMono L2
ENSG00000079950 STX7 893085 sc-eQTL 7.31e-01 0.0217 0.0629 0.486 ncMono L2
ENSG00000093134 VNN3 671518 sc-eQTL 2.34e-01 -0.106 0.0885 0.486 ncMono L2
ENSG00000112299 VNN1 692228 sc-eQTL 7.86e-01 0.0239 0.0881 0.486 ncMono L2
ENSG00000112303 VNN2 642824 sc-eQTL 1.41e-01 -0.124 0.0843 0.486 ncMono L2
ENSG00000112306 RPS12 591714 sc-eQTL 4.91e-01 0.0293 0.0425 0.486 ncMono L2
ENSG00000118515 SGK1 -911829 sc-eQTL 1.07e-01 -0.0967 0.0597 0.486 ncMono L2
ENSG00000146409 SLC18B1 592944 sc-eQTL 2.36e-01 -0.0889 0.0748 0.486 ncMono L2
ENSG00000286887 AL355881.1 -890018 sc-eQTL 5.43e-01 0.0483 0.0793 0.486 ncMono L2
ENSG00000028839 TBPL1 -545887 sc-eQTL 5.55e-01 0.0657 0.111 0.472 pDC L2
ENSG00000079950 STX7 893085 sc-eQTL 7.06e-02 -0.133 0.0733 0.472 pDC L2
ENSG00000093134 VNN3 671518 sc-eQTL 7.62e-02 0.132 0.0738 0.472 pDC L2
ENSG00000112299 VNN1 692228 sc-eQTL 2.81e-01 0.0818 0.0756 0.472 pDC L2
ENSG00000112303 VNN2 642824 sc-eQTL 4.43e-02 0.181 0.0891 0.472 pDC L2
ENSG00000112306 RPS12 591714 sc-eQTL 1.52e-01 0.0889 0.0618 0.472 pDC L2
ENSG00000118515 SGK1 -911829 sc-eQTL 9.94e-01 -0.000438 0.0632 0.472 pDC L2
ENSG00000146409 SLC18B1 592944 sc-eQTL 9.83e-02 0.152 0.0913 0.472 pDC L2
ENSG00000286438 AL591115.1 303155 sc-eQTL 4.17e-01 -0.0715 0.0879 0.472 pDC L2
ENSG00000286887 AL355881.1 -890018 sc-eQTL 2.83e-01 0.0838 0.0778 0.472 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -545887 sc-eQTL 1.77e-01 -0.126 0.0932 0.476 B_Memory LOneK1K
ENSG00000079950 STX7 893085 sc-eQTL 1.60e-02 -0.123 0.0508 0.476 B_Memory LOneK1K
ENSG00000112303 VNN2 642824 sc-eQTL 7.01e-02 -0.147 0.0809 0.476 B_Memory LOneK1K
ENSG00000112306 RPS12 591714 sc-eQTL 4.06e-01 0.0386 0.0464 0.476 B_Memory LOneK1K
ENSG00000118515 SGK1 -911829 sc-eQTL 3.17e-01 -0.0727 0.0724 0.476 B_Memory LOneK1K
ENSG00000146409 SLC18B1 592944 sc-eQTL 4.63e-01 0.0626 0.0851 0.476 B_Memory LOneK1K
ENSG00000028839 TBPL1 -545887 sc-eQTL 7.44e-02 -0.155 0.0866 0.476 B_Naive LOneK1K
ENSG00000079950 STX7 893085 sc-eQTL 8.24e-01 -0.00875 0.0393 0.476 B_Naive LOneK1K
ENSG00000112303 VNN2 642824 sc-eQTL 8.38e-01 0.0156 0.0763 0.476 B_Naive LOneK1K
ENSG00000112306 RPS12 591714 sc-eQTL 5.56e-01 -0.0272 0.0461 0.476 B_Naive LOneK1K
ENSG00000118515 SGK1 -911829 sc-eQTL 6.53e-01 0.0322 0.0714 0.476 B_Naive LOneK1K
ENSG00000146409 SLC18B1 592944 sc-eQTL 8.14e-02 0.151 0.0865 0.476 B_Naive LOneK1K
ENSG00000028839 TBPL1 -545887 sc-eQTL 3.25e-01 0.0687 0.0697 0.476 CD14_Mono LOneK1K
ENSG00000079950 STX7 893085 sc-eQTL 7.30e-01 -0.0168 0.0486 0.476 CD14_Mono LOneK1K
ENSG00000093134 VNN3 671518 sc-eQTL 6.22e-01 -0.0391 0.0791 0.476 CD14_Mono LOneK1K
ENSG00000112299 VNN1 692228 sc-eQTL 6.53e-02 -0.152 0.0819 0.476 CD14_Mono LOneK1K
ENSG00000112303 VNN2 642824 sc-eQTL 8.30e-01 0.0117 0.0546 0.476 CD14_Mono LOneK1K
ENSG00000112306 RPS12 591714 sc-eQTL 7.46e-01 0.0121 0.0374 0.476 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -911829 sc-eQTL 5.33e-02 -0.0983 0.0506 0.476 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 592944 sc-eQTL 3.88e-01 0.0575 0.0665 0.476 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -890018 sc-eQTL 3.02e-01 -0.0722 0.0697 0.476 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -545887 sc-eQTL 8.06e-01 -0.0221 0.0896 0.476 CD16_Mono LOneK1K
ENSG00000079950 STX7 893085 sc-eQTL 6.45e-01 -0.0272 0.0591 0.476 CD16_Mono LOneK1K
ENSG00000093134 VNN3 671518 sc-eQTL 2.73e-01 -0.0954 0.0867 0.476 CD16_Mono LOneK1K
ENSG00000112299 VNN1 692228 sc-eQTL 7.63e-01 -0.026 0.0862 0.476 CD16_Mono LOneK1K
ENSG00000112303 VNN2 642824 sc-eQTL 1.88e-01 -0.107 0.0809 0.476 CD16_Mono LOneK1K
ENSG00000112306 RPS12 591714 sc-eQTL 3.07e-01 0.0352 0.0344 0.476 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -911829 sc-eQTL 7.34e-02 -0.0932 0.0518 0.476 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 592944 sc-eQTL 7.79e-01 0.0236 0.0837 0.476 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -890018 sc-eQTL 4.84e-01 -0.0531 0.0756 0.476 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -545887 sc-eQTL 8.97e-01 0.00943 0.0729 0.474 NK_CD56dim LOneK1K
ENSG00000079950 STX7 893085 sc-eQTL 1.88e-01 -0.09 0.0682 0.474 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 642824 sc-eQTL 4.91e-01 -0.0598 0.0866 0.474 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 591714 sc-eQTL 3.90e-01 0.0304 0.0353 0.474 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -911829 sc-eQTL 5.01e-01 0.0491 0.073 0.474 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079950 STX7 893085 eQTL 0.00298 -0.0469 0.0158 0.0 0.0 0.467
ENSG00000112299 VNN1 692228 pQTL 0.00379 -0.101 0.0348 0.0 0.0 0.461

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079950 STX7 893085 2.66e-07 1.3e-07 3.44e-08 1.82e-07 9.91e-08 9.32e-08 1.42e-07 5.49e-08 1.42e-07 4.24e-08 1.59e-07 7.75e-08 1.27e-07 6.21e-08 5.44e-08 8.01e-08 4.94e-08 1.1e-07 5.22e-08 3.74e-08 1.06e-07 1.3e-07 1.3e-07 4.67e-08 1.29e-07 1.13e-07 1.13e-07 8.7e-08 1.03e-07 1.1e-07 9.58e-08 3.8e-08 2.74e-08 8.25e-08 9.15e-08 3.93e-08 4.75e-08 9.2e-08 8.42e-08 3.37e-08 4e-08 1.37e-07 4.12e-08 5.07e-08 9.21e-08 1.74e-08 1.34e-07 4.41e-09 4.74e-08