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Genes within 1Mb (chr6:133404638:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -547532 sc-eQTL 6.48e-02 -0.168 0.0903 0.395 B L1
ENSG00000079950 STX7 891440 sc-eQTL 4.68e-01 -0.0264 0.0362 0.395 B L1
ENSG00000112303 VNN2 641179 sc-eQTL 4.77e-01 -0.0485 0.0681 0.395 B L1
ENSG00000112306 RPS12 590069 sc-eQTL 6.07e-01 0.0212 0.0412 0.395 B L1
ENSG00000118515 SGK1 -913474 sc-eQTL 1.89e-01 0.0834 0.0633 0.395 B L1
ENSG00000146409 SLC18B1 591299 sc-eQTL 4.87e-01 0.0604 0.0867 0.395 B L1
ENSG00000028839 TBPL1 -547532 sc-eQTL 2.72e-01 -0.0743 0.0675 0.395 CD4T L1
ENSG00000079950 STX7 891440 sc-eQTL 3.37e-01 -0.0675 0.0702 0.395 CD4T L1
ENSG00000112303 VNN2 641179 sc-eQTL 8.99e-02 -0.103 0.0605 0.395 CD4T L1
ENSG00000112306 RPS12 590069 sc-eQTL 3.65e-01 0.0375 0.0413 0.395 CD4T L1
ENSG00000118515 SGK1 -913474 sc-eQTL 2.80e-01 0.0601 0.0555 0.395 CD4T L1
ENSG00000146409 SLC18B1 591299 sc-eQTL 9.03e-01 0.0102 0.0838 0.395 CD4T L1
ENSG00000028839 TBPL1 -547532 sc-eQTL 7.82e-02 -0.118 0.0666 0.395 CD8T L1
ENSG00000079950 STX7 891440 sc-eQTL 1.78e-01 -0.0941 0.0697 0.395 CD8T L1
ENSG00000112303 VNN2 641179 sc-eQTL 1.24e-01 -0.126 0.0813 0.395 CD8T L1
ENSG00000112306 RPS12 590069 sc-eQTL 5.22e-01 0.0179 0.0279 0.395 CD8T L1
ENSG00000118515 SGK1 -913474 sc-eQTL 5.86e-01 -0.0234 0.043 0.395 CD8T L1
ENSG00000146409 SLC18B1 591299 sc-eQTL 4.47e-01 0.0642 0.0844 0.395 CD8T L1
ENSG00000028839 TBPL1 -547532 sc-eQTL 4.72e-01 -0.0742 0.103 0.39 DC L1
ENSG00000079950 STX7 891440 sc-eQTL 1.32e-01 -0.0963 0.0637 0.39 DC L1
ENSG00000093134 VNN3 669873 sc-eQTL 5.42e-01 -0.0485 0.0794 0.39 DC L1
ENSG00000112299 VNN1 690583 sc-eQTL 9.89e-01 -0.00114 0.0858 0.39 DC L1
ENSG00000112303 VNN2 641179 sc-eQTL 5.97e-01 -0.0485 0.0917 0.39 DC L1
ENSG00000112306 RPS12 590069 sc-eQTL 1.23e-01 0.0791 0.0511 0.39 DC L1
ENSG00000118515 SGK1 -913474 sc-eQTL 5.86e-01 -0.0326 0.0596 0.39 DC L1
ENSG00000146409 SLC18B1 591299 sc-eQTL 1.36e-01 0.121 0.081 0.39 DC L1
ENSG00000286438 AL591115.1 301510 sc-eQTL 5.16e-01 -0.0482 0.074 0.39 DC L1
ENSG00000286887 AL355881.1 -891663 sc-eQTL 4.53e-01 -0.0693 0.0922 0.39 DC L1
ENSG00000028839 TBPL1 -547532 sc-eQTL 4.46e-01 0.0538 0.0704 0.395 Mono L1
ENSG00000079950 STX7 891440 sc-eQTL 6.63e-01 -0.0206 0.0472 0.395 Mono L1
ENSG00000093134 VNN3 669873 sc-eQTL 4.64e-01 0.0593 0.0809 0.395 Mono L1
ENSG00000112299 VNN1 690583 sc-eQTL 1.13e-01 -0.138 0.0866 0.395 Mono L1
ENSG00000112303 VNN2 641179 sc-eQTL 4.61e-01 -0.0454 0.0614 0.395 Mono L1
ENSG00000112306 RPS12 590069 sc-eQTL 8.68e-01 0.00612 0.0368 0.395 Mono L1
ENSG00000118515 SGK1 -913474 sc-eQTL 9.13e-02 -0.0877 0.0517 0.395 Mono L1
ENSG00000146409 SLC18B1 591299 sc-eQTL 7.16e-01 0.0265 0.0729 0.395 Mono L1
ENSG00000286887 AL355881.1 -891663 sc-eQTL 5.38e-01 -0.0442 0.0716 0.395 Mono L1
ENSG00000028839 TBPL1 -547532 sc-eQTL 8.33e-01 -0.0165 0.0782 0.395 NK L1
ENSG00000079950 STX7 891440 sc-eQTL 1.34e-01 -0.108 0.0719 0.395 NK L1
ENSG00000112303 VNN2 641179 sc-eQTL 2.75e-01 -0.0982 0.0898 0.395 NK L1
ENSG00000112306 RPS12 590069 sc-eQTL 1.49e-01 0.0536 0.0371 0.395 NK L1
ENSG00000118515 SGK1 -913474 sc-eQTL 8.81e-02 0.117 0.0684 0.395 NK L1
ENSG00000028839 TBPL1 -547532 sc-eQTL 1.44e-01 0.133 0.0906 0.395 Other_T L1
ENSG00000079950 STX7 891440 sc-eQTL 2.55e-01 -0.0816 0.0715 0.395 Other_T L1
ENSG00000112303 VNN2 641179 sc-eQTL 4.35e-01 -0.0678 0.0866 0.395 Other_T L1
ENSG00000112306 RPS12 590069 sc-eQTL 3.71e-01 0.0308 0.0343 0.395 Other_T L1
ENSG00000118515 SGK1 -913474 sc-eQTL 5.56e-01 0.0372 0.0632 0.395 Other_T L1
ENSG00000146409 SLC18B1 591299 sc-eQTL 3.17e-01 -0.0942 0.0939 0.395 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -547532 sc-eQTL 9.75e-01 0.00331 0.104 0.411 B_Activated L2
ENSG00000079950 STX7 891440 sc-eQTL 9.26e-01 -0.00836 0.0894 0.411 B_Activated L2
ENSG00000112303 VNN2 641179 sc-eQTL 9.56e-01 0.00525 0.0951 0.411 B_Activated L2
ENSG00000112306 RPS12 590069 sc-eQTL 8.52e-01 -0.00949 0.051 0.411 B_Activated L2
ENSG00000118515 SGK1 -913474 sc-eQTL 9.01e-01 -0.0113 0.0909 0.411 B_Activated L2
ENSG00000146409 SLC18B1 591299 sc-eQTL 6.31e-01 -0.0429 0.0892 0.411 B_Activated L2
ENSG00000028839 TBPL1 -547532 sc-eQTL 2.69e-01 -0.113 0.102 0.397 B_Intermediate L2
ENSG00000079950 STX7 891440 sc-eQTL 4.82e-02 -0.116 0.0583 0.397 B_Intermediate L2
ENSG00000112303 VNN2 641179 sc-eQTL 6.12e-01 -0.0449 0.0885 0.397 B_Intermediate L2
ENSG00000112306 RPS12 590069 sc-eQTL 6.08e-01 0.0278 0.0542 0.397 B_Intermediate L2
ENSG00000118515 SGK1 -913474 sc-eQTL 3.83e-01 -0.0819 0.0936 0.397 B_Intermediate L2
ENSG00000146409 SLC18B1 591299 sc-eQTL 2.50e-01 0.112 0.0974 0.397 B_Intermediate L2
ENSG00000028839 TBPL1 -547532 sc-eQTL 7.41e-01 -0.032 0.0966 0.392 B_Memory L2
ENSG00000079950 STX7 891440 sc-eQTL 3.96e-01 -0.0594 0.0698 0.392 B_Memory L2
ENSG00000112303 VNN2 641179 sc-eQTL 8.33e-01 -0.0193 0.0914 0.392 B_Memory L2
ENSG00000112306 RPS12 590069 sc-eQTL 6.68e-01 0.0189 0.044 0.392 B_Memory L2
ENSG00000118515 SGK1 -913474 sc-eQTL 6.64e-01 -0.0352 0.0808 0.392 B_Memory L2
ENSG00000146409 SLC18B1 591299 sc-eQTL 1.37e-01 -0.136 0.0914 0.392 B_Memory L2
ENSG00000028839 TBPL1 -547532 sc-eQTL 1.96e-01 -0.119 0.0919 0.395 B_Naive1 L2
ENSG00000079950 STX7 891440 sc-eQTL 5.49e-01 -0.0266 0.0443 0.395 B_Naive1 L2
ENSG00000112303 VNN2 641179 sc-eQTL 3.59e-01 0.0789 0.0859 0.395 B_Naive1 L2
ENSG00000112306 RPS12 590069 sc-eQTL 3.38e-01 0.047 0.0489 0.395 B_Naive1 L2
ENSG00000118515 SGK1 -913474 sc-eQTL 2.96e-01 0.0801 0.0765 0.395 B_Naive1 L2
ENSG00000146409 SLC18B1 591299 sc-eQTL 6.13e-01 0.0479 0.0946 0.395 B_Naive1 L2
ENSG00000028839 TBPL1 -547532 sc-eQTL 2.12e-01 -0.121 0.0971 0.393 B_Naive2 L2
ENSG00000079950 STX7 891440 sc-eQTL 6.47e-01 -0.0237 0.0517 0.393 B_Naive2 L2
ENSG00000112303 VNN2 641179 sc-eQTL 2.62e-01 -0.107 0.0947 0.393 B_Naive2 L2
ENSG00000112306 RPS12 590069 sc-eQTL 8.02e-01 0.0126 0.0503 0.393 B_Naive2 L2
ENSG00000118515 SGK1 -913474 sc-eQTL 6.23e-01 0.0437 0.0888 0.393 B_Naive2 L2
ENSG00000146409 SLC18B1 591299 sc-eQTL 6.42e-01 0.0447 0.0959 0.393 B_Naive2 L2
ENSG00000028839 TBPL1 -547532 sc-eQTL 8.85e-01 0.0139 0.096 0.398 CD4_CTL L2
ENSG00000079950 STX7 891440 sc-eQTL 7.71e-01 0.0278 0.0954 0.398 CD4_CTL L2
ENSG00000112303 VNN2 641179 sc-eQTL 2.28e-02 -0.218 0.095 0.398 CD4_CTL L2
ENSG00000112306 RPS12 590069 sc-eQTL 3.71e-01 0.0398 0.0444 0.398 CD4_CTL L2
ENSG00000118515 SGK1 -913474 sc-eQTL 2.61e-01 -0.0867 0.0768 0.398 CD4_CTL L2
ENSG00000146409 SLC18B1 591299 sc-eQTL 8.17e-01 -0.0208 0.0896 0.398 CD4_CTL L2
ENSG00000028839 TBPL1 -547532 sc-eQTL 5.69e-01 -0.044 0.0772 0.395 CD4_Naive L2
ENSG00000079950 STX7 891440 sc-eQTL 6.10e-01 0.0386 0.0757 0.395 CD4_Naive L2
ENSG00000112303 VNN2 641179 sc-eQTL 2.15e-01 -0.0869 0.0699 0.395 CD4_Naive L2
ENSG00000112306 RPS12 590069 sc-eQTL 3.07e-01 0.0465 0.0454 0.395 CD4_Naive L2
ENSG00000118515 SGK1 -913474 sc-eQTL 2.59e-01 0.0629 0.0556 0.395 CD4_Naive L2
ENSG00000146409 SLC18B1 591299 sc-eQTL 7.48e-01 0.0281 0.0876 0.395 CD4_Naive L2
ENSG00000028839 TBPL1 -547532 sc-eQTL 7.60e-01 -0.0252 0.0826 0.395 CD4_TCM L2
ENSG00000079950 STX7 891440 sc-eQTL 4.44e-02 -0.167 0.0824 0.395 CD4_TCM L2
ENSG00000112303 VNN2 641179 sc-eQTL 5.14e-01 -0.0535 0.0819 0.395 CD4_TCM L2
ENSG00000112306 RPS12 590069 sc-eQTL 3.51e-01 0.0396 0.0424 0.395 CD4_TCM L2
ENSG00000118515 SGK1 -913474 sc-eQTL 7.00e-01 0.023 0.0594 0.395 CD4_TCM L2
ENSG00000146409 SLC18B1 591299 sc-eQTL 1.70e-01 -0.135 0.098 0.395 CD4_TCM L2
ENSG00000028839 TBPL1 -547532 sc-eQTL 3.22e-01 -0.0954 0.0962 0.395 CD4_TEM L2
ENSG00000079950 STX7 891440 sc-eQTL 3.07e-01 -0.0985 0.0963 0.395 CD4_TEM L2
ENSG00000112303 VNN2 641179 sc-eQTL 3.00e-01 -0.096 0.0924 0.395 CD4_TEM L2
ENSG00000112306 RPS12 590069 sc-eQTL 4.55e-01 0.0284 0.0379 0.395 CD4_TEM L2
ENSG00000118515 SGK1 -913474 sc-eQTL 9.76e-01 0.00199 0.0653 0.395 CD4_TEM L2
ENSG00000146409 SLC18B1 591299 sc-eQTL 2.50e-01 -0.108 0.0941 0.395 CD4_TEM L2
ENSG00000028839 TBPL1 -547532 sc-eQTL 8.47e-01 -0.0164 0.0849 0.395 CD8_CTL L2
ENSG00000079950 STX7 891440 sc-eQTL 4.63e-01 -0.0583 0.0793 0.395 CD8_CTL L2
ENSG00000112303 VNN2 641179 sc-eQTL 2.85e-01 -0.0965 0.09 0.395 CD8_CTL L2
ENSG00000112306 RPS12 590069 sc-eQTL 6.86e-01 0.0195 0.0483 0.395 CD8_CTL L2
ENSG00000118515 SGK1 -913474 sc-eQTL 7.28e-01 -0.0284 0.0815 0.395 CD8_CTL L2
ENSG00000146409 SLC18B1 591299 sc-eQTL 8.42e-01 -0.0187 0.0935 0.395 CD8_CTL L2
ENSG00000028839 TBPL1 -547532 sc-eQTL 1.66e-01 -0.126 0.0908 0.395 CD8_Naive L2
ENSG00000079950 STX7 891440 sc-eQTL 9.96e-02 -0.16 0.0965 0.395 CD8_Naive L2
ENSG00000112303 VNN2 641179 sc-eQTL 2.11e-01 -0.105 0.0835 0.395 CD8_Naive L2
ENSG00000112306 RPS12 590069 sc-eQTL 8.89e-02 0.0815 0.0477 0.395 CD8_Naive L2
ENSG00000118515 SGK1 -913474 sc-eQTL 7.14e-01 0.0221 0.0602 0.395 CD8_Naive L2
ENSG00000146409 SLC18B1 591299 sc-eQTL 1.18e-01 0.15 0.0957 0.395 CD8_Naive L2
ENSG00000028839 TBPL1 -547532 sc-eQTL 9.53e-01 -0.00609 0.104 0.396 CD8_TCM L2
ENSG00000079950 STX7 891440 sc-eQTL 2.97e-01 -0.1 0.0961 0.396 CD8_TCM L2
ENSG00000112303 VNN2 641179 sc-eQTL 8.15e-01 0.0224 0.0956 0.396 CD8_TCM L2
ENSG00000112306 RPS12 590069 sc-eQTL 1.84e-01 0.0618 0.0464 0.396 CD8_TCM L2
ENSG00000118515 SGK1 -913474 sc-eQTL 6.23e-01 -0.0379 0.0771 0.396 CD8_TCM L2
ENSG00000146409 SLC18B1 591299 sc-eQTL 9.90e-01 -0.00125 0.102 0.396 CD8_TCM L2
ENSG00000028839 TBPL1 -547532 sc-eQTL 4.39e-01 -0.0724 0.0934 0.395 CD8_TEM L2
ENSG00000079950 STX7 891440 sc-eQTL 3.38e-01 0.0978 0.102 0.395 CD8_TEM L2
ENSG00000112303 VNN2 641179 sc-eQTL 6.10e-02 -0.19 0.101 0.395 CD8_TEM L2
ENSG00000112306 RPS12 590069 sc-eQTL 7.00e-01 -0.0211 0.0546 0.395 CD8_TEM L2
ENSG00000118515 SGK1 -913474 sc-eQTL 2.53e-02 -0.199 0.0884 0.395 CD8_TEM L2
ENSG00000146409 SLC18B1 591299 sc-eQTL 6.25e-01 -0.0505 0.103 0.395 CD8_TEM L2
ENSG00000028839 TBPL1 -547532 sc-eQTL 1.01e-01 0.156 0.0946 0.394 MAIT L2
ENSG00000079950 STX7 891440 sc-eQTL 6.29e-01 -0.0437 0.0904 0.394 MAIT L2
ENSG00000112303 VNN2 641179 sc-eQTL 6.36e-01 -0.0435 0.0919 0.394 MAIT L2
ENSG00000112306 RPS12 590069 sc-eQTL 4.99e-01 0.0306 0.0452 0.394 MAIT L2
ENSG00000118515 SGK1 -913474 sc-eQTL 6.17e-01 0.0319 0.0637 0.394 MAIT L2
ENSG00000146409 SLC18B1 591299 sc-eQTL 2.66e-01 -0.106 0.0946 0.394 MAIT L2
ENSG00000028839 TBPL1 -547532 sc-eQTL 6.08e-01 0.0527 0.103 0.396 NK_CD56bright L2
ENSG00000079950 STX7 891440 sc-eQTL 3.94e-01 -0.0812 0.0951 0.396 NK_CD56bright L2
ENSG00000112303 VNN2 641179 sc-eQTL 9.73e-01 -0.00325 0.0968 0.396 NK_CD56bright L2
ENSG00000112306 RPS12 590069 sc-eQTL 3.53e-01 -0.05 0.0538 0.396 NK_CD56bright L2
ENSG00000118515 SGK1 -913474 sc-eQTL 1.23e-01 0.124 0.0801 0.396 NK_CD56bright L2
ENSG00000028839 TBPL1 -547532 sc-eQTL 1.63e-01 0.117 0.0835 0.394 NK_CD56dim L2
ENSG00000079950 STX7 891440 sc-eQTL 5.50e-01 -0.046 0.0767 0.394 NK_CD56dim L2
ENSG00000112303 VNN2 641179 sc-eQTL 8.93e-01 -0.013 0.0961 0.394 NK_CD56dim L2
ENSG00000112306 RPS12 590069 sc-eQTL 8.41e-02 0.0657 0.0378 0.394 NK_CD56dim L2
ENSG00000118515 SGK1 -913474 sc-eQTL 9.01e-01 -0.0105 0.0844 0.394 NK_CD56dim L2
ENSG00000028839 TBPL1 -547532 sc-eQTL 8.28e-01 -0.023 0.105 0.395 NK_HLA L2
ENSG00000079950 STX7 891440 sc-eQTL 4.28e-01 -0.076 0.0958 0.395 NK_HLA L2
ENSG00000112303 VNN2 641179 sc-eQTL 3.22e-01 -0.0961 0.0969 0.395 NK_HLA L2
ENSG00000112306 RPS12 590069 sc-eQTL 8.40e-01 0.00912 0.0452 0.395 NK_HLA L2
ENSG00000118515 SGK1 -913474 sc-eQTL 3.02e-01 -0.0923 0.0892 0.395 NK_HLA L2
ENSG00000028839 TBPL1 -547532 sc-eQTL 1.59e-01 -0.123 0.0868 0.394 NK_cytokine L2
ENSG00000079950 STX7 891440 sc-eQTL 2.38e-01 -0.0996 0.0842 0.394 NK_cytokine L2
ENSG00000112303 VNN2 641179 sc-eQTL 1.25e-01 -0.146 0.0944 0.394 NK_cytokine L2
ENSG00000112306 RPS12 590069 sc-eQTL 6.71e-01 0.0219 0.0515 0.394 NK_cytokine L2
ENSG00000118515 SGK1 -913474 sc-eQTL 6.95e-03 0.23 0.0843 0.394 NK_cytokine L2
ENSG00000028839 TBPL1 -547532 sc-eQTL 6.73e-01 0.0505 0.119 0.404 PB L2
ENSG00000079950 STX7 891440 sc-eQTL 3.59e-01 -0.0781 0.0848 0.404 PB L2
ENSG00000112303 VNN2 641179 sc-eQTL 3.51e-01 -0.0969 0.104 0.404 PB L2
ENSG00000112306 RPS12 590069 sc-eQTL 5.14e-01 0.0386 0.0589 0.404 PB L2
ENSG00000118515 SGK1 -913474 sc-eQTL 4.10e-01 0.0786 0.095 0.404 PB L2
ENSG00000146409 SLC18B1 591299 sc-eQTL 1.28e-01 -0.168 0.109 0.404 PB L2
ENSG00000028839 TBPL1 -547532 sc-eQTL 4.16e-01 0.0811 0.0996 0.398 Pro_T L2
ENSG00000079950 STX7 891440 sc-eQTL 4.93e-01 -0.0611 0.0889 0.398 Pro_T L2
ENSG00000112303 VNN2 641179 sc-eQTL 4.18e-01 0.0774 0.0954 0.398 Pro_T L2
ENSG00000112306 RPS12 590069 sc-eQTL 4.60e-01 0.0267 0.0361 0.398 Pro_T L2
ENSG00000118515 SGK1 -913474 sc-eQTL 4.54e-01 -0.0543 0.0723 0.398 Pro_T L2
ENSG00000146409 SLC18B1 591299 sc-eQTL 1.66e-01 -0.129 0.0931 0.398 Pro_T L2
ENSG00000028839 TBPL1 -547532 sc-eQTL 6.51e-02 -0.182 0.0979 0.395 Treg L2
ENSG00000079950 STX7 891440 sc-eQTL 9.16e-01 -0.0098 0.0931 0.395 Treg L2
ENSG00000112303 VNN2 641179 sc-eQTL 7.61e-01 -0.0238 0.0783 0.395 Treg L2
ENSG00000112306 RPS12 590069 sc-eQTL 5.94e-01 -0.0185 0.0346 0.395 Treg L2
ENSG00000118515 SGK1 -913474 sc-eQTL 2.54e-01 -0.0831 0.0727 0.395 Treg L2
ENSG00000146409 SLC18B1 591299 sc-eQTL 1.20e-01 0.152 0.0973 0.395 Treg L2
ENSG00000028839 TBPL1 -547532 sc-eQTL 9.63e-01 -0.00479 0.104 0.395 cDC L2
ENSG00000079950 STX7 891440 sc-eQTL 7.36e-01 -0.0276 0.0816 0.395 cDC L2
ENSG00000093134 VNN3 669873 sc-eQTL 2.28e-01 -0.0976 0.0807 0.395 cDC L2
ENSG00000112299 VNN1 690583 sc-eQTL 4.54e-01 -0.0714 0.0951 0.395 cDC L2
ENSG00000112303 VNN2 641179 sc-eQTL 3.31e-02 -0.197 0.0917 0.395 cDC L2
ENSG00000112306 RPS12 590069 sc-eQTL 2.90e-01 0.0485 0.0457 0.395 cDC L2
ENSG00000118515 SGK1 -913474 sc-eQTL 2.82e-01 -0.0831 0.077 0.395 cDC L2
ENSG00000146409 SLC18B1 591299 sc-eQTL 9.05e-01 -0.0108 0.0908 0.395 cDC L2
ENSG00000286438 AL591115.1 301510 sc-eQTL 5.78e-01 -0.0404 0.0725 0.395 cDC L2
ENSG00000286887 AL355881.1 -891663 sc-eQTL 9.97e-01 0.00036 0.0893 0.395 cDC L2
ENSG00000028839 TBPL1 -547532 sc-eQTL 7.26e-01 0.0282 0.0803 0.395 cMono_IL1B L2
ENSG00000079950 STX7 891440 sc-eQTL 5.10e-01 -0.0402 0.0609 0.395 cMono_IL1B L2
ENSG00000093134 VNN3 669873 sc-eQTL 4.05e-01 0.0717 0.086 0.395 cMono_IL1B L2
ENSG00000112299 VNN1 690583 sc-eQTL 7.80e-02 -0.153 0.0863 0.395 cMono_IL1B L2
ENSG00000112303 VNN2 641179 sc-eQTL 6.57e-01 -0.0309 0.0695 0.395 cMono_IL1B L2
ENSG00000112306 RPS12 590069 sc-eQTL 9.75e-01 0.00121 0.0386 0.395 cMono_IL1B L2
ENSG00000118515 SGK1 -913474 sc-eQTL 2.38e-01 -0.0679 0.0574 0.395 cMono_IL1B L2
ENSG00000146409 SLC18B1 591299 sc-eQTL 3.07e-01 0.076 0.0743 0.395 cMono_IL1B L2
ENSG00000286887 AL355881.1 -891663 sc-eQTL 8.38e-01 -0.0159 0.0775 0.395 cMono_IL1B L2
ENSG00000028839 TBPL1 -547532 sc-eQTL 4.45e-01 0.0695 0.0908 0.395 cMono_S100A L2
ENSG00000079950 STX7 891440 sc-eQTL 2.26e-01 -0.0796 0.0655 0.395 cMono_S100A L2
ENSG00000093134 VNN3 669873 sc-eQTL 7.39e-01 0.0273 0.082 0.395 cMono_S100A L2
ENSG00000112299 VNN1 690583 sc-eQTL 1.46e-01 -0.129 0.0887 0.395 cMono_S100A L2
ENSG00000112303 VNN2 641179 sc-eQTL 9.11e-01 -0.00651 0.0584 0.395 cMono_S100A L2
ENSG00000112306 RPS12 590069 sc-eQTL 4.65e-01 0.0307 0.042 0.395 cMono_S100A L2
ENSG00000118515 SGK1 -913474 sc-eQTL 3.84e-01 -0.0418 0.048 0.395 cMono_S100A L2
ENSG00000146409 SLC18B1 591299 sc-eQTL 6.71e-01 0.033 0.0778 0.395 cMono_S100A L2
ENSG00000286887 AL355881.1 -891663 sc-eQTL 9.42e-01 0.00551 0.0761 0.395 cMono_S100A L2
ENSG00000028839 TBPL1 -547532 sc-eQTL 6.39e-01 0.0612 0.13 0.397 gdT L2
ENSG00000079950 STX7 891440 sc-eQTL 1.17e-01 -0.175 0.111 0.397 gdT L2
ENSG00000112303 VNN2 641179 sc-eQTL 6.12e-01 0.0631 0.124 0.397 gdT L2
ENSG00000112306 RPS12 590069 sc-eQTL 1.10e-02 0.119 0.0462 0.397 gdT L2
ENSG00000118515 SGK1 -913474 sc-eQTL 6.21e-02 -0.166 0.0881 0.397 gdT L2
ENSG00000146409 SLC18B1 591299 sc-eQTL 9.57e-01 0.00662 0.122 0.397 gdT L2
ENSG00000028839 TBPL1 -547532 sc-eQTL 3.16e-01 0.0922 0.0918 0.396 intMono L2
ENSG00000079950 STX7 891440 sc-eQTL 2.44e-01 -0.102 0.0876 0.396 intMono L2
ENSG00000093134 VNN3 669873 sc-eQTL 5.81e-01 -0.049 0.0886 0.396 intMono L2
ENSG00000112299 VNN1 690583 sc-eQTL 2.17e-01 -0.108 0.0874 0.396 intMono L2
ENSG00000112303 VNN2 641179 sc-eQTL 1.16e-01 -0.14 0.0886 0.396 intMono L2
ENSG00000112306 RPS12 590069 sc-eQTL 6.35e-01 0.0184 0.0388 0.396 intMono L2
ENSG00000118515 SGK1 -913474 sc-eQTL 7.36e-01 -0.022 0.0651 0.396 intMono L2
ENSG00000146409 SLC18B1 591299 sc-eQTL 8.49e-01 -0.018 0.0944 0.396 intMono L2
ENSG00000286887 AL355881.1 -891663 sc-eQTL 3.50e-01 -0.0844 0.0901 0.396 intMono L2
ENSG00000028839 TBPL1 -547532 sc-eQTL 1.75e-01 -0.132 0.0973 0.403 ncMono L2
ENSG00000079950 STX7 891440 sc-eQTL 2.96e-01 0.0691 0.0659 0.403 ncMono L2
ENSG00000093134 VNN3 669873 sc-eQTL 6.28e-01 -0.0453 0.0933 0.403 ncMono L2
ENSG00000112299 VNN1 690583 sc-eQTL 8.41e-01 0.0186 0.0926 0.403 ncMono L2
ENSG00000112303 VNN2 641179 sc-eQTL 5.12e-02 -0.173 0.0882 0.403 ncMono L2
ENSG00000112306 RPS12 590069 sc-eQTL 5.73e-01 0.0252 0.0446 0.403 ncMono L2
ENSG00000118515 SGK1 -913474 sc-eQTL 4.40e-02 -0.127 0.0625 0.403 ncMono L2
ENSG00000146409 SLC18B1 591299 sc-eQTL 3.59e-01 -0.0724 0.0787 0.403 ncMono L2
ENSG00000286887 AL355881.1 -891663 sc-eQTL 4.69e-01 0.0605 0.0833 0.403 ncMono L2
ENSG00000028839 TBPL1 -547532 sc-eQTL 7.23e-01 0.0418 0.118 0.398 pDC L2
ENSG00000079950 STX7 891440 sc-eQTL 7.28e-02 -0.14 0.0775 0.398 pDC L2
ENSG00000093134 VNN3 669873 sc-eQTL 4.16e-01 0.0641 0.0787 0.398 pDC L2
ENSG00000112299 VNN1 690583 sc-eQTL 6.32e-01 0.0385 0.0802 0.398 pDC L2
ENSG00000112303 VNN2 641179 sc-eQTL 1.39e-02 0.233 0.0936 0.398 pDC L2
ENSG00000112306 RPS12 590069 sc-eQTL 2.44e-01 0.0765 0.0655 0.398 pDC L2
ENSG00000118515 SGK1 -913474 sc-eQTL 8.10e-01 0.0161 0.0668 0.398 pDC L2
ENSG00000146409 SLC18B1 591299 sc-eQTL 5.94e-02 0.183 0.0963 0.398 pDC L2
ENSG00000286438 AL591115.1 301510 sc-eQTL 6.95e-01 -0.0366 0.0931 0.398 pDC L2
ENSG00000286887 AL355881.1 -891663 sc-eQTL 7.01e-01 0.0318 0.0826 0.398 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -547532 sc-eQTL 7.83e-02 -0.172 0.0971 0.395 B_Memory LOneK1K
ENSG00000079950 STX7 891440 sc-eQTL 3.73e-02 -0.112 0.0533 0.395 B_Memory LOneK1K
ENSG00000112303 VNN2 641179 sc-eQTL 1.30e-01 -0.129 0.0847 0.395 B_Memory LOneK1K
ENSG00000112306 RPS12 590069 sc-eQTL 2.80e-01 0.0524 0.0484 0.395 B_Memory LOneK1K
ENSG00000118515 SGK1 -913474 sc-eQTL 4.08e-01 -0.0627 0.0758 0.395 B_Memory LOneK1K
ENSG00000146409 SLC18B1 591299 sc-eQTL 9.60e-01 0.00452 0.0891 0.395 B_Memory LOneK1K
ENSG00000028839 TBPL1 -547532 sc-eQTL 8.35e-02 -0.159 0.0914 0.395 B_Naive LOneK1K
ENSG00000079950 STX7 891440 sc-eQTL 6.89e-01 -0.0166 0.0414 0.395 B_Naive LOneK1K
ENSG00000112303 VNN2 641179 sc-eQTL 9.03e-01 -0.00985 0.0805 0.395 B_Naive LOneK1K
ENSG00000112306 RPS12 590069 sc-eQTL 6.34e-01 0.0232 0.0487 0.395 B_Naive LOneK1K
ENSG00000118515 SGK1 -913474 sc-eQTL 2.82e-01 0.0812 0.0752 0.395 B_Naive LOneK1K
ENSG00000146409 SLC18B1 591299 sc-eQTL 3.68e-01 0.0827 0.0917 0.395 B_Naive LOneK1K
ENSG00000028839 TBPL1 -547532 sc-eQTL 3.31e-01 0.0712 0.0731 0.395 CD14_Mono LOneK1K
ENSG00000079950 STX7 891440 sc-eQTL 3.64e-01 -0.0463 0.0509 0.395 CD14_Mono LOneK1K
ENSG00000093134 VNN3 669873 sc-eQTL 4.04e-01 0.0693 0.0829 0.395 CD14_Mono LOneK1K
ENSG00000112299 VNN1 690583 sc-eQTL 5.70e-02 -0.164 0.0859 0.395 CD14_Mono LOneK1K
ENSG00000112303 VNN2 641179 sc-eQTL 6.20e-01 -0.0284 0.0572 0.395 CD14_Mono LOneK1K
ENSG00000112306 RPS12 590069 sc-eQTL 9.02e-01 0.00486 0.0393 0.395 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -913474 sc-eQTL 2.18e-01 -0.0659 0.0533 0.395 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 591299 sc-eQTL 3.85e-01 0.0607 0.0698 0.395 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -891663 sc-eQTL 9.04e-01 -0.00889 0.0733 0.395 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -547532 sc-eQTL 8.22e-01 -0.0213 0.0946 0.394 CD16_Mono LOneK1K
ENSG00000079950 STX7 891440 sc-eQTL 6.93e-01 0.0246 0.0624 0.394 CD16_Mono LOneK1K
ENSG00000093134 VNN3 669873 sc-eQTL 7.82e-01 -0.0254 0.0918 0.394 CD16_Mono LOneK1K
ENSG00000112299 VNN1 690583 sc-eQTL 8.61e-01 -0.016 0.091 0.394 CD16_Mono LOneK1K
ENSG00000112303 VNN2 641179 sc-eQTL 5.12e-02 -0.167 0.085 0.394 CD16_Mono LOneK1K
ENSG00000112306 RPS12 590069 sc-eQTL 4.46e-01 0.0278 0.0364 0.394 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -913474 sc-eQTL 1.66e-01 -0.0762 0.0549 0.394 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 591299 sc-eQTL 9.95e-01 0.000533 0.0884 0.394 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -891663 sc-eQTL 5.44e-01 -0.0486 0.0799 0.394 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -547532 sc-eQTL 9.37e-01 -0.00616 0.0772 0.394 NK_CD56dim LOneK1K
ENSG00000079950 STX7 891440 sc-eQTL 1.42e-01 -0.106 0.0722 0.394 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 641179 sc-eQTL 2.48e-01 -0.106 0.0916 0.394 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 590069 sc-eQTL 1.15e-01 0.0589 0.0373 0.394 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -913474 sc-eQTL 1.32e-01 0.116 0.077 0.394 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079950 STX7 891440 eQTL 0.0409 -0.0331 0.0162 0.0 0.0 0.39
ENSG00000112299 VNN1 690583 pQTL 0.00153 -0.114 0.0358 0.0 0.0 0.383
ENSG00000146409 SLC18B1 591299 eQTL 0.0469 -0.0452 0.0227 0.0 0.0 0.39

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079950 STX7 891440 2.64e-07 1.3e-07 3.72e-08 1.82e-07 8.92e-08 9.61e-08 1.42e-07 5.33e-08 1.41e-07 4.57e-08 1.56e-07 8.36e-08 1.41e-07 6.38e-08 6e-08 7.26e-08 3.94e-08 1.14e-07 5.19e-08 4.21e-08 1.05e-07 1.26e-07 1.32e-07 4.16e-08 1.32e-07 1.14e-07 1.11e-07 9.15e-08 1.03e-07 1.12e-07 9.73e-08 3.87e-08 3.09e-08 8.65e-08 8.76e-08 3.96e-08 5.01e-08 9.22e-08 6.56e-08 3.55e-08 3.98e-08 1.31e-07 4.19e-08 1.18e-08 6.38e-08 1.68e-08 1.19e-07 3.86e-09 4.81e-08