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Genes within 1Mb (chr6:133404332:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -547838 sc-eQTL 9.67e-02 -0.249 0.149 0.904 B L1
ENSG00000079950 STX7 891134 sc-eQTL 1.38e-01 0.0886 0.0594 0.904 B L1
ENSG00000112303 VNN2 640873 sc-eQTL 2.68e-01 -0.124 0.112 0.904 B L1
ENSG00000112306 RPS12 589763 sc-eQTL 1.93e-01 0.0883 0.0677 0.904 B L1
ENSG00000118515 SGK1 -913780 sc-eQTL 2.84e-01 -0.112 0.104 0.904 B L1
ENSG00000146409 SLC18B1 590993 sc-eQTL 9.95e-01 -0.000939 0.143 0.904 B L1
ENSG00000028839 TBPL1 -547838 sc-eQTL 3.62e-01 -0.1 0.11 0.904 CD4T L1
ENSG00000079950 STX7 891134 sc-eQTL 3.79e-01 -0.101 0.114 0.904 CD4T L1
ENSG00000112303 VNN2 640873 sc-eQTL 7.48e-01 -0.0318 0.0991 0.904 CD4T L1
ENSG00000112306 RPS12 589763 sc-eQTL 7.07e-01 0.0253 0.0674 0.904 CD4T L1
ENSG00000118515 SGK1 -913780 sc-eQTL 9.88e-01 -0.00142 0.0906 0.904 CD4T L1
ENSG00000146409 SLC18B1 590993 sc-eQTL 1.23e-01 -0.21 0.136 0.904 CD4T L1
ENSG00000028839 TBPL1 -547838 sc-eQTL 6.08e-02 -0.204 0.108 0.904 CD8T L1
ENSG00000079950 STX7 891134 sc-eQTL 1.14e-01 -0.18 0.113 0.904 CD8T L1
ENSG00000112303 VNN2 640873 sc-eQTL 2.06e-01 -0.168 0.133 0.904 CD8T L1
ENSG00000112306 RPS12 589763 sc-eQTL 4.54e-01 0.0342 0.0455 0.904 CD8T L1
ENSG00000118515 SGK1 -913780 sc-eQTL 3.56e-01 -0.0648 0.0701 0.904 CD8T L1
ENSG00000146409 SLC18B1 590993 sc-eQTL 7.82e-01 -0.0381 0.138 0.904 CD8T L1
ENSG00000028839 TBPL1 -547838 sc-eQTL 8.38e-01 -0.0339 0.165 0.901 DC L1
ENSG00000079950 STX7 891134 sc-eQTL 9.03e-01 -0.0125 0.103 0.901 DC L1
ENSG00000093134 VNN3 669567 sc-eQTL 1.24e-01 -0.195 0.127 0.901 DC L1
ENSG00000112299 VNN1 690277 sc-eQTL 6.55e-01 -0.0614 0.137 0.901 DC L1
ENSG00000112303 VNN2 640873 sc-eQTL 3.63e-01 -0.134 0.147 0.901 DC L1
ENSG00000112306 RPS12 589763 sc-eQTL 3.19e-01 -0.0822 0.0823 0.901 DC L1
ENSG00000118515 SGK1 -913780 sc-eQTL 3.97e-02 -0.196 0.0947 0.901 DC L1
ENSG00000146409 SLC18B1 590993 sc-eQTL 4.25e-01 -0.104 0.13 0.901 DC L1
ENSG00000286438 AL591115.1 301204 sc-eQTL 5.23e-01 -0.0759 0.119 0.901 DC L1
ENSG00000286887 AL355881.1 -891969 sc-eQTL 6.22e-01 -0.073 0.148 0.901 DC L1
ENSG00000028839 TBPL1 -547838 sc-eQTL 7.34e-01 0.0392 0.115 0.904 Mono L1
ENSG00000079950 STX7 891134 sc-eQTL 1.94e-01 0.1 0.0769 0.904 Mono L1
ENSG00000093134 VNN3 669567 sc-eQTL 8.71e-01 0.0216 0.132 0.904 Mono L1
ENSG00000112299 VNN1 690277 sc-eQTL 6.87e-01 0.0575 0.143 0.904 Mono L1
ENSG00000112303 VNN2 640873 sc-eQTL 7.60e-02 -0.178 0.0999 0.904 Mono L1
ENSG00000112306 RPS12 589763 sc-eQTL 7.17e-01 -0.0219 0.0603 0.904 Mono L1
ENSG00000118515 SGK1 -913780 sc-eQTL 3.43e-01 -0.0807 0.085 0.904 Mono L1
ENSG00000146409 SLC18B1 590993 sc-eQTL 4.86e-01 -0.0832 0.119 0.904 Mono L1
ENSG00000286887 AL355881.1 -891969 sc-eQTL 9.78e-02 -0.194 0.116 0.904 Mono L1
ENSG00000028839 TBPL1 -547838 sc-eQTL 3.87e-01 0.111 0.128 0.903 NK L1
ENSG00000079950 STX7 891134 sc-eQTL 8.19e-02 0.206 0.118 0.903 NK L1
ENSG00000112303 VNN2 640873 sc-eQTL 9.99e-01 -0.000241 0.148 0.903 NK L1
ENSG00000112306 RPS12 589763 sc-eQTL 7.75e-01 -0.0175 0.0612 0.903 NK L1
ENSG00000118515 SGK1 -913780 sc-eQTL 7.41e-01 -0.0375 0.113 0.903 NK L1
ENSG00000028839 TBPL1 -547838 sc-eQTL 5.37e-01 0.0931 0.151 0.904 Other_T L1
ENSG00000079950 STX7 891134 sc-eQTL 7.34e-01 -0.0404 0.119 0.904 Other_T L1
ENSG00000112303 VNN2 640873 sc-eQTL 3.00e-01 -0.149 0.143 0.904 Other_T L1
ENSG00000112306 RPS12 589763 sc-eQTL 6.65e-01 -0.0247 0.0568 0.904 Other_T L1
ENSG00000118515 SGK1 -913780 sc-eQTL 7.46e-01 -0.0339 0.105 0.904 Other_T L1
ENSG00000146409 SLC18B1 590993 sc-eQTL 5.93e-02 -0.293 0.154 0.904 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -547838 sc-eQTL 5.49e-01 0.11 0.183 0.911 B_Activated L2
ENSG00000079950 STX7 891134 sc-eQTL 8.70e-01 0.0256 0.157 0.911 B_Activated L2
ENSG00000112303 VNN2 640873 sc-eQTL 4.56e-01 0.124 0.167 0.911 B_Activated L2
ENSG00000112306 RPS12 589763 sc-eQTL 8.97e-01 -0.0116 0.0894 0.911 B_Activated L2
ENSG00000118515 SGK1 -913780 sc-eQTL 8.42e-01 0.0319 0.159 0.911 B_Activated L2
ENSG00000146409 SLC18B1 590993 sc-eQTL 7.06e-01 0.0591 0.157 0.911 B_Activated L2
ENSG00000028839 TBPL1 -547838 sc-eQTL 3.11e-01 0.168 0.165 0.903 B_Intermediate L2
ENSG00000079950 STX7 891134 sc-eQTL 4.75e-01 0.068 0.095 0.903 B_Intermediate L2
ENSG00000112303 VNN2 640873 sc-eQTL 6.33e-01 0.0686 0.143 0.903 B_Intermediate L2
ENSG00000112306 RPS12 589763 sc-eQTL 1.73e-01 0.119 0.0873 0.903 B_Intermediate L2
ENSG00000118515 SGK1 -913780 sc-eQTL 7.82e-02 -0.266 0.151 0.903 B_Intermediate L2
ENSG00000146409 SLC18B1 590993 sc-eQTL 7.97e-01 -0.0407 0.158 0.903 B_Intermediate L2
ENSG00000028839 TBPL1 -547838 sc-eQTL 9.10e-01 0.018 0.16 0.903 B_Memory L2
ENSG00000079950 STX7 891134 sc-eQTL 1.03e-03 0.375 0.113 0.903 B_Memory L2
ENSG00000112303 VNN2 640873 sc-eQTL 2.10e-01 -0.189 0.151 0.903 B_Memory L2
ENSG00000112306 RPS12 589763 sc-eQTL 7.84e-01 0.02 0.0728 0.903 B_Memory L2
ENSG00000118515 SGK1 -913780 sc-eQTL 5.31e-01 -0.0838 0.133 0.903 B_Memory L2
ENSG00000146409 SLC18B1 590993 sc-eQTL 6.47e-01 0.0697 0.152 0.903 B_Memory L2
ENSG00000028839 TBPL1 -547838 sc-eQTL 1.91e-02 -0.349 0.148 0.904 B_Naive1 L2
ENSG00000079950 STX7 891134 sc-eQTL 1.55e-01 0.102 0.0716 0.904 B_Naive1 L2
ENSG00000112303 VNN2 640873 sc-eQTL 2.16e-01 -0.173 0.139 0.904 B_Naive1 L2
ENSG00000112306 RPS12 589763 sc-eQTL 1.15e-01 0.125 0.0791 0.904 B_Naive1 L2
ENSG00000118515 SGK1 -913780 sc-eQTL 7.84e-01 0.0341 0.124 0.904 B_Naive1 L2
ENSG00000146409 SLC18B1 590993 sc-eQTL 8.09e-01 0.0372 0.154 0.904 B_Naive1 L2
ENSG00000028839 TBPL1 -547838 sc-eQTL 3.28e-02 -0.343 0.16 0.903 B_Naive2 L2
ENSG00000079950 STX7 891134 sc-eQTL 3.42e-01 0.0814 0.0855 0.903 B_Naive2 L2
ENSG00000112303 VNN2 640873 sc-eQTL 9.04e-01 0.019 0.157 0.903 B_Naive2 L2
ENSG00000112306 RPS12 589763 sc-eQTL 5.68e-02 0.158 0.0826 0.903 B_Naive2 L2
ENSG00000118515 SGK1 -913780 sc-eQTL 5.53e-01 0.0873 0.147 0.903 B_Naive2 L2
ENSG00000146409 SLC18B1 590993 sc-eQTL 2.31e-01 -0.19 0.158 0.903 B_Naive2 L2
ENSG00000028839 TBPL1 -547838 sc-eQTL 9.49e-01 0.00987 0.154 0.9 CD4_CTL L2
ENSG00000079950 STX7 891134 sc-eQTL 5.75e-01 -0.0858 0.153 0.9 CD4_CTL L2
ENSG00000112303 VNN2 640873 sc-eQTL 6.30e-01 -0.0746 0.154 0.9 CD4_CTL L2
ENSG00000112306 RPS12 589763 sc-eQTL 6.54e-01 0.032 0.0713 0.9 CD4_CTL L2
ENSG00000118515 SGK1 -913780 sc-eQTL 1.72e-01 -0.169 0.123 0.9 CD4_CTL L2
ENSG00000146409 SLC18B1 590993 sc-eQTL 8.09e-01 0.0349 0.144 0.9 CD4_CTL L2
ENSG00000028839 TBPL1 -547838 sc-eQTL 1.09e-01 -0.201 0.125 0.904 CD4_Naive L2
ENSG00000079950 STX7 891134 sc-eQTL 3.66e-01 -0.111 0.123 0.904 CD4_Naive L2
ENSG00000112303 VNN2 640873 sc-eQTL 5.16e-01 -0.0741 0.114 0.904 CD4_Naive L2
ENSG00000112306 RPS12 589763 sc-eQTL 8.60e-01 0.0131 0.0739 0.904 CD4_Naive L2
ENSG00000118515 SGK1 -913780 sc-eQTL 9.08e-01 -0.0104 0.0905 0.904 CD4_Naive L2
ENSG00000146409 SLC18B1 590993 sc-eQTL 5.17e-02 -0.276 0.141 0.904 CD4_Naive L2
ENSG00000028839 TBPL1 -547838 sc-eQTL 8.94e-01 0.0178 0.134 0.904 CD4_TCM L2
ENSG00000079950 STX7 891134 sc-eQTL 6.09e-01 -0.0691 0.135 0.904 CD4_TCM L2
ENSG00000112303 VNN2 640873 sc-eQTL 8.12e-01 -0.0317 0.133 0.904 CD4_TCM L2
ENSG00000112306 RPS12 589763 sc-eQTL 4.90e-01 0.0477 0.0689 0.904 CD4_TCM L2
ENSG00000118515 SGK1 -913780 sc-eQTL 4.48e-01 -0.0732 0.0964 0.904 CD4_TCM L2
ENSG00000146409 SLC18B1 590993 sc-eQTL 3.28e-01 -0.156 0.159 0.904 CD4_TCM L2
ENSG00000028839 TBPL1 -547838 sc-eQTL 3.59e-01 0.143 0.156 0.904 CD4_TEM L2
ENSG00000079950 STX7 891134 sc-eQTL 2.76e-01 -0.17 0.156 0.904 CD4_TEM L2
ENSG00000112303 VNN2 640873 sc-eQTL 5.89e-01 -0.0812 0.15 0.904 CD4_TEM L2
ENSG00000112306 RPS12 589763 sc-eQTL 9.07e-01 0.00717 0.0615 0.904 CD4_TEM L2
ENSG00000118515 SGK1 -913780 sc-eQTL 4.31e-01 -0.0833 0.106 0.904 CD4_TEM L2
ENSG00000146409 SLC18B1 590993 sc-eQTL 6.78e-01 0.0635 0.153 0.904 CD4_TEM L2
ENSG00000028839 TBPL1 -547838 sc-eQTL 8.01e-01 0.0348 0.138 0.904 CD8_CTL L2
ENSG00000079950 STX7 891134 sc-eQTL 5.48e-01 -0.0777 0.129 0.904 CD8_CTL L2
ENSG00000112303 VNN2 640873 sc-eQTL 8.85e-01 -0.0213 0.147 0.904 CD8_CTL L2
ENSG00000112306 RPS12 589763 sc-eQTL 7.88e-01 0.0212 0.0786 0.904 CD8_CTL L2
ENSG00000118515 SGK1 -913780 sc-eQTL 9.21e-01 -0.0132 0.133 0.904 CD8_CTL L2
ENSG00000146409 SLC18B1 590993 sc-eQTL 1.07e-01 -0.245 0.151 0.904 CD8_CTL L2
ENSG00000028839 TBPL1 -547838 sc-eQTL 5.09e-02 -0.285 0.145 0.904 CD8_Naive L2
ENSG00000079950 STX7 891134 sc-eQTL 2.70e-01 -0.172 0.155 0.904 CD8_Naive L2
ENSG00000112303 VNN2 640873 sc-eQTL 7.20e-02 -0.241 0.133 0.904 CD8_Naive L2
ENSG00000112306 RPS12 589763 sc-eQTL 7.82e-02 0.135 0.0764 0.904 CD8_Naive L2
ENSG00000118515 SGK1 -913780 sc-eQTL 7.30e-01 -0.0334 0.0966 0.904 CD8_Naive L2
ENSG00000146409 SLC18B1 590993 sc-eQTL 8.39e-01 -0.0314 0.154 0.904 CD8_Naive L2
ENSG00000028839 TBPL1 -547838 sc-eQTL 4.97e-02 -0.324 0.164 0.903 CD8_TCM L2
ENSG00000079950 STX7 891134 sc-eQTL 8.23e-01 0.0343 0.153 0.903 CD8_TCM L2
ENSG00000112303 VNN2 640873 sc-eQTL 8.50e-01 0.0289 0.152 0.903 CD8_TCM L2
ENSG00000112306 RPS12 589763 sc-eQTL 6.47e-01 0.034 0.0741 0.903 CD8_TCM L2
ENSG00000118515 SGK1 -913780 sc-eQTL 4.59e-01 -0.0911 0.123 0.903 CD8_TCM L2
ENSG00000146409 SLC18B1 590993 sc-eQTL 3.43e-01 -0.154 0.162 0.903 CD8_TCM L2
ENSG00000028839 TBPL1 -547838 sc-eQTL 5.77e-01 -0.0839 0.15 0.9 CD8_TEM L2
ENSG00000079950 STX7 891134 sc-eQTL 9.12e-01 0.0181 0.164 0.9 CD8_TEM L2
ENSG00000112303 VNN2 640873 sc-eQTL 5.90e-01 -0.0879 0.163 0.9 CD8_TEM L2
ENSG00000112306 RPS12 589763 sc-eQTL 9.22e-01 0.00855 0.0877 0.9 CD8_TEM L2
ENSG00000118515 SGK1 -913780 sc-eQTL 1.96e-01 -0.186 0.143 0.9 CD8_TEM L2
ENSG00000146409 SLC18B1 590993 sc-eQTL 6.81e-01 0.0681 0.166 0.9 CD8_TEM L2
ENSG00000028839 TBPL1 -547838 sc-eQTL 7.11e-01 -0.0576 0.155 0.903 MAIT L2
ENSG00000079950 STX7 891134 sc-eQTL 2.59e-01 -0.166 0.147 0.903 MAIT L2
ENSG00000112303 VNN2 640873 sc-eQTL 5.26e-01 -0.0951 0.15 0.903 MAIT L2
ENSG00000112306 RPS12 589763 sc-eQTL 9.11e-01 0.00825 0.0738 0.903 MAIT L2
ENSG00000118515 SGK1 -913780 sc-eQTL 4.69e-01 -0.0752 0.104 0.903 MAIT L2
ENSG00000146409 SLC18B1 590993 sc-eQTL 2.80e-02 -0.338 0.153 0.903 MAIT L2
ENSG00000028839 TBPL1 -547838 sc-eQTL 7.68e-01 0.0489 0.166 0.902 NK_CD56bright L2
ENSG00000079950 STX7 891134 sc-eQTL 8.07e-01 -0.0375 0.154 0.902 NK_CD56bright L2
ENSG00000112303 VNN2 640873 sc-eQTL 1.69e-01 -0.214 0.156 0.902 NK_CD56bright L2
ENSG00000112306 RPS12 589763 sc-eQTL 9.84e-02 -0.144 0.0865 0.902 NK_CD56bright L2
ENSG00000118515 SGK1 -913780 sc-eQTL 7.33e-01 0.0444 0.13 0.902 NK_CD56bright L2
ENSG00000028839 TBPL1 -547838 sc-eQTL 9.69e-02 0.23 0.138 0.903 NK_CD56dim L2
ENSG00000079950 STX7 891134 sc-eQTL 3.24e-01 0.126 0.127 0.903 NK_CD56dim L2
ENSG00000112303 VNN2 640873 sc-eQTL 2.84e-01 0.17 0.159 0.903 NK_CD56dim L2
ENSG00000112306 RPS12 589763 sc-eQTL 8.58e-01 -0.0113 0.0632 0.903 NK_CD56dim L2
ENSG00000118515 SGK1 -913780 sc-eQTL 2.80e-01 -0.151 0.14 0.903 NK_CD56dim L2
ENSG00000028839 TBPL1 -547838 sc-eQTL 6.01e-01 0.0904 0.173 0.904 NK_HLA L2
ENSG00000079950 STX7 891134 sc-eQTL 6.34e-01 0.0749 0.157 0.904 NK_HLA L2
ENSG00000112303 VNN2 640873 sc-eQTL 4.39e-01 -0.123 0.159 0.904 NK_HLA L2
ENSG00000112306 RPS12 589763 sc-eQTL 3.18e-01 -0.0741 0.074 0.904 NK_HLA L2
ENSG00000118515 SGK1 -913780 sc-eQTL 4.65e-01 -0.107 0.146 0.904 NK_HLA L2
ENSG00000028839 TBPL1 -547838 sc-eQTL 7.72e-01 0.0421 0.145 0.903 NK_cytokine L2
ENSG00000079950 STX7 891134 sc-eQTL 7.98e-02 0.246 0.139 0.903 NK_cytokine L2
ENSG00000112303 VNN2 640873 sc-eQTL 8.50e-01 -0.0298 0.158 0.903 NK_cytokine L2
ENSG00000112306 RPS12 589763 sc-eQTL 3.60e-01 -0.0785 0.0856 0.903 NK_cytokine L2
ENSG00000118515 SGK1 -913780 sc-eQTL 6.16e-01 -0.0716 0.143 0.903 NK_cytokine L2
ENSG00000028839 TBPL1 -547838 sc-eQTL 8.27e-01 -0.0457 0.208 0.915 PB L2
ENSG00000079950 STX7 891134 sc-eQTL 5.45e-01 -0.09 0.148 0.915 PB L2
ENSG00000112303 VNN2 640873 sc-eQTL 3.91e-01 -0.156 0.181 0.915 PB L2
ENSG00000112306 RPS12 589763 sc-eQTL 9.97e-01 0.000434 0.103 0.915 PB L2
ENSG00000118515 SGK1 -913780 sc-eQTL 7.45e-01 0.0541 0.166 0.915 PB L2
ENSG00000146409 SLC18B1 590993 sc-eQTL 5.16e-01 -0.125 0.193 0.915 PB L2
ENSG00000028839 TBPL1 -547838 sc-eQTL 1.47e-01 0.234 0.161 0.907 Pro_T L2
ENSG00000079950 STX7 891134 sc-eQTL 4.48e-01 0.11 0.144 0.907 Pro_T L2
ENSG00000112303 VNN2 640873 sc-eQTL 6.36e-01 0.0733 0.155 0.907 Pro_T L2
ENSG00000112306 RPS12 589763 sc-eQTL 1.99e-01 -0.0753 0.0584 0.907 Pro_T L2
ENSG00000118515 SGK1 -913780 sc-eQTL 5.60e-01 0.0685 0.117 0.907 Pro_T L2
ENSG00000146409 SLC18B1 590993 sc-eQTL 5.50e-01 0.0908 0.152 0.907 Pro_T L2
ENSG00000028839 TBPL1 -547838 sc-eQTL 4.03e-01 -0.133 0.159 0.904 Treg L2
ENSG00000079950 STX7 891134 sc-eQTL 6.11e-01 0.0763 0.15 0.904 Treg L2
ENSG00000112303 VNN2 640873 sc-eQTL 3.69e-01 0.113 0.126 0.904 Treg L2
ENSG00000112306 RPS12 589763 sc-eQTL 8.32e-01 -0.0118 0.0557 0.904 Treg L2
ENSG00000118515 SGK1 -913780 sc-eQTL 3.69e-01 0.106 0.117 0.904 Treg L2
ENSG00000146409 SLC18B1 590993 sc-eQTL 3.21e-01 -0.156 0.157 0.904 Treg L2
ENSG00000028839 TBPL1 -547838 sc-eQTL 1.66e-01 -0.227 0.163 0.895 cDC L2
ENSG00000079950 STX7 891134 sc-eQTL 6.66e-01 0.0556 0.129 0.895 cDC L2
ENSG00000093134 VNN3 669567 sc-eQTL 3.98e-01 -0.108 0.128 0.895 cDC L2
ENSG00000112299 VNN1 690277 sc-eQTL 9.74e-01 0.00495 0.15 0.895 cDC L2
ENSG00000112303 VNN2 640873 sc-eQTL 6.61e-02 -0.268 0.145 0.895 cDC L2
ENSG00000112306 RPS12 589763 sc-eQTL 6.79e-01 0.03 0.0723 0.895 cDC L2
ENSG00000118515 SGK1 -913780 sc-eQTL 5.29e-04 -0.416 0.118 0.895 cDC L2
ENSG00000146409 SLC18B1 590993 sc-eQTL 1.83e-01 -0.191 0.143 0.895 cDC L2
ENSG00000286438 AL591115.1 301204 sc-eQTL 2.17e-01 -0.141 0.114 0.895 cDC L2
ENSG00000286887 AL355881.1 -891969 sc-eQTL 5.61e-01 -0.0819 0.141 0.895 cDC L2
ENSG00000028839 TBPL1 -547838 sc-eQTL 9.43e-01 0.00937 0.131 0.904 cMono_IL1B L2
ENSG00000079950 STX7 891134 sc-eQTL 7.96e-01 0.0257 0.0995 0.904 cMono_IL1B L2
ENSG00000093134 VNN3 669567 sc-eQTL 9.59e-01 -0.00724 0.141 0.904 cMono_IL1B L2
ENSG00000112299 VNN1 690277 sc-eQTL 9.09e-01 -0.0163 0.142 0.904 cMono_IL1B L2
ENSG00000112303 VNN2 640873 sc-eQTL 3.71e-01 -0.102 0.113 0.904 cMono_IL1B L2
ENSG00000112306 RPS12 589763 sc-eQTL 6.39e-01 -0.0296 0.063 0.904 cMono_IL1B L2
ENSG00000118515 SGK1 -913780 sc-eQTL 1.71e-01 -0.129 0.0936 0.904 cMono_IL1B L2
ENSG00000146409 SLC18B1 590993 sc-eQTL 7.40e-01 0.0404 0.122 0.904 cMono_IL1B L2
ENSG00000286887 AL355881.1 -891969 sc-eQTL 3.24e-01 -0.125 0.126 0.904 cMono_IL1B L2
ENSG00000028839 TBPL1 -547838 sc-eQTL 9.17e-01 0.0156 0.149 0.904 cMono_S100A L2
ENSG00000079950 STX7 891134 sc-eQTL 3.12e-02 0.231 0.107 0.904 cMono_S100A L2
ENSG00000093134 VNN3 669567 sc-eQTL 7.11e-01 0.05 0.135 0.904 cMono_S100A L2
ENSG00000112299 VNN1 690277 sc-eQTL 4.39e-01 0.113 0.146 0.904 cMono_S100A L2
ENSG00000112303 VNN2 640873 sc-eQTL 1.27e-01 -0.146 0.0952 0.904 cMono_S100A L2
ENSG00000112306 RPS12 589763 sc-eQTL 8.99e-01 0.00877 0.0689 0.904 cMono_S100A L2
ENSG00000118515 SGK1 -913780 sc-eQTL 7.86e-01 -0.0215 0.0788 0.904 cMono_S100A L2
ENSG00000146409 SLC18B1 590993 sc-eQTL 2.43e-01 -0.149 0.127 0.904 cMono_S100A L2
ENSG00000286887 AL355881.1 -891969 sc-eQTL 5.24e-02 -0.241 0.124 0.904 cMono_S100A L2
ENSG00000028839 TBPL1 -547838 sc-eQTL 9.14e-01 0.022 0.202 0.903 gdT L2
ENSG00000079950 STX7 891134 sc-eQTL 3.52e-01 0.162 0.173 0.903 gdT L2
ENSG00000112303 VNN2 640873 sc-eQTL 2.79e-01 -0.208 0.192 0.903 gdT L2
ENSG00000112306 RPS12 589763 sc-eQTL 6.49e-01 0.0335 0.0733 0.903 gdT L2
ENSG00000118515 SGK1 -913780 sc-eQTL 7.87e-01 0.0375 0.138 0.903 gdT L2
ENSG00000146409 SLC18B1 590993 sc-eQTL 4.29e-01 -0.15 0.189 0.903 gdT L2
ENSG00000028839 TBPL1 -547838 sc-eQTL 6.12e-01 0.0768 0.151 0.9 intMono L2
ENSG00000079950 STX7 891134 sc-eQTL 4.04e-01 0.121 0.144 0.9 intMono L2
ENSG00000093134 VNN3 669567 sc-eQTL 9.87e-01 -0.00234 0.146 0.9 intMono L2
ENSG00000112299 VNN1 690277 sc-eQTL 5.58e-01 0.0845 0.144 0.9 intMono L2
ENSG00000112303 VNN2 640873 sc-eQTL 2.10e-01 -0.184 0.146 0.9 intMono L2
ENSG00000112306 RPS12 589763 sc-eQTL 8.55e-02 -0.109 0.0633 0.9 intMono L2
ENSG00000118515 SGK1 -913780 sc-eQTL 7.14e-01 -0.0393 0.107 0.9 intMono L2
ENSG00000146409 SLC18B1 590993 sc-eQTL 9.31e-03 -0.401 0.153 0.9 intMono L2
ENSG00000286887 AL355881.1 -891969 sc-eQTL 1.08e-01 -0.238 0.148 0.9 intMono L2
ENSG00000028839 TBPL1 -547838 sc-eQTL 4.24e-01 -0.128 0.16 0.903 ncMono L2
ENSG00000079950 STX7 891134 sc-eQTL 6.60e-01 -0.0477 0.108 0.903 ncMono L2
ENSG00000093134 VNN3 669567 sc-eQTL 3.13e-03 -0.448 0.15 0.903 ncMono L2
ENSG00000112299 VNN1 690277 sc-eQTL 9.64e-01 -0.00683 0.152 0.903 ncMono L2
ENSG00000112303 VNN2 640873 sc-eQTL 2.92e-02 -0.317 0.144 0.903 ncMono L2
ENSG00000112306 RPS12 589763 sc-eQTL 2.86e-01 0.0781 0.073 0.903 ncMono L2
ENSG00000118515 SGK1 -913780 sc-eQTL 5.67e-01 -0.0593 0.104 0.903 ncMono L2
ENSG00000146409 SLC18B1 590993 sc-eQTL 3.51e-01 0.121 0.129 0.903 ncMono L2
ENSG00000286887 AL355881.1 -891969 sc-eQTL 4.36e-01 0.107 0.137 0.903 ncMono L2
ENSG00000028839 TBPL1 -547838 sc-eQTL 6.13e-01 0.0941 0.186 0.898 pDC L2
ENSG00000079950 STX7 891134 sc-eQTL 3.24e-01 -0.122 0.123 0.898 pDC L2
ENSG00000093134 VNN3 669567 sc-eQTL 1.98e-01 -0.16 0.124 0.898 pDC L2
ENSG00000112299 VNN1 690277 sc-eQTL 2.30e-01 -0.152 0.126 0.898 pDC L2
ENSG00000112303 VNN2 640873 sc-eQTL 2.54e-01 0.172 0.15 0.898 pDC L2
ENSG00000112306 RPS12 589763 sc-eQTL 1.60e-02 -0.249 0.102 0.898 pDC L2
ENSG00000118515 SGK1 -913780 sc-eQTL 5.72e-01 -0.0598 0.106 0.898 pDC L2
ENSG00000146409 SLC18B1 590993 sc-eQTL 4.23e-01 -0.124 0.154 0.898 pDC L2
ENSG00000286438 AL591115.1 301204 sc-eQTL 8.86e-01 -0.0212 0.147 0.898 pDC L2
ENSG00000286887 AL355881.1 -891969 sc-eQTL 7.32e-01 0.0448 0.131 0.898 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -547838 sc-eQTL 2.46e-01 0.185 0.159 0.904 B_Memory LOneK1K
ENSG00000079950 STX7 891134 sc-eQTL 9.42e-03 0.226 0.0863 0.904 B_Memory LOneK1K
ENSG00000112303 VNN2 640873 sc-eQTL 5.32e-01 -0.0868 0.139 0.904 B_Memory LOneK1K
ENSG00000112306 RPS12 589763 sc-eQTL 2.08e-01 0.0994 0.0787 0.904 B_Memory LOneK1K
ENSG00000118515 SGK1 -913780 sc-eQTL 2.65e-01 -0.138 0.123 0.904 B_Memory LOneK1K
ENSG00000146409 SLC18B1 590993 sc-eQTL 8.33e-01 0.0306 0.145 0.904 B_Memory LOneK1K
ENSG00000028839 TBPL1 -547838 sc-eQTL 3.40e-04 -0.534 0.147 0.904 B_Naive LOneK1K
ENSG00000079950 STX7 891134 sc-eQTL 5.84e-02 0.129 0.0676 0.904 B_Naive LOneK1K
ENSG00000112303 VNN2 640873 sc-eQTL 3.15e-01 -0.133 0.132 0.904 B_Naive LOneK1K
ENSG00000112306 RPS12 589763 sc-eQTL 1.24e-01 0.123 0.0796 0.904 B_Naive LOneK1K
ENSG00000118515 SGK1 -913780 sc-eQTL 9.29e-01 0.011 0.124 0.904 B_Naive LOneK1K
ENSG00000146409 SLC18B1 590993 sc-eQTL 5.72e-01 -0.0853 0.151 0.904 B_Naive LOneK1K
ENSG00000028839 TBPL1 -547838 sc-eQTL 7.66e-01 0.0356 0.119 0.904 CD14_Mono LOneK1K
ENSG00000079950 STX7 891134 sc-eQTL 1.47e-01 0.12 0.0827 0.904 CD14_Mono LOneK1K
ENSG00000093134 VNN3 669567 sc-eQTL 9.63e-01 0.00623 0.135 0.904 CD14_Mono LOneK1K
ENSG00000112299 VNN1 690277 sc-eQTL 7.85e-01 0.0386 0.141 0.904 CD14_Mono LOneK1K
ENSG00000112303 VNN2 640873 sc-eQTL 1.66e-01 -0.129 0.0929 0.904 CD14_Mono LOneK1K
ENSG00000112306 RPS12 589763 sc-eQTL 5.64e-01 -0.0369 0.064 0.904 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -913780 sc-eQTL 2.23e-01 -0.106 0.0869 0.904 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 590993 sc-eQTL 6.35e-01 -0.0541 0.114 0.904 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -891969 sc-eQTL 7.33e-02 -0.213 0.119 0.904 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -547838 sc-eQTL 9.89e-01 -0.00222 0.155 0.903 CD16_Mono LOneK1K
ENSG00000079950 STX7 891134 sc-eQTL 4.95e-01 0.0697 0.102 0.903 CD16_Mono LOneK1K
ENSG00000093134 VNN3 669567 sc-eQTL 1.32e-01 -0.226 0.149 0.903 CD16_Mono LOneK1K
ENSG00000112299 VNN1 690277 sc-eQTL 9.64e-01 -0.00663 0.149 0.903 CD16_Mono LOneK1K
ENSG00000112303 VNN2 640873 sc-eQTL 1.44e-01 -0.205 0.14 0.903 CD16_Mono LOneK1K
ENSG00000112306 RPS12 589763 sc-eQTL 5.40e-01 0.0365 0.0595 0.903 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -913780 sc-eQTL 5.60e-01 -0.0526 0.0901 0.903 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 590993 sc-eQTL 8.14e-02 -0.251 0.144 0.903 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -891969 sc-eQTL 3.80e-01 -0.115 0.13 0.903 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -547838 sc-eQTL 1.88e-01 0.168 0.127 0.903 NK_CD56dim LOneK1K
ENSG00000079950 STX7 891134 sc-eQTL 6.33e-02 0.222 0.119 0.903 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 640873 sc-eQTL 7.24e-01 0.0535 0.152 0.903 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 589763 sc-eQTL 9.45e-01 -0.00429 0.0619 0.903 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -913780 sc-eQTL 3.64e-01 -0.116 0.128 0.903 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079950 STX7 891134 pQTL 0.0286 -0.0897 0.0409 0.0 0.0 0.0791
ENSG00000112299 VNN1 690277 pQTL 0.00485 0.178 0.0632 0.0 0.0 0.0791
ENSG00000146409 SLC18B1 590993 eQTL 0.0147 -0.0957 0.0391 0.0 0.0 0.08

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079950 STX7 891134 2.64e-07 1.11e-07 3.56e-08 1.79e-07 9.65e-08 9.57e-08 1.41e-07 5.49e-08 1.41e-07 4.38e-08 1.59e-07 8.14e-08 1.3e-07 6.76e-08 5.84e-08 7.5e-08 4.63e-08 1.14e-07 5.36e-08 4.03e-08 1.04e-07 1.27e-07 1.3e-07 4.53e-08 1.32e-07 1.19e-07 1.12e-07 9.32e-08 9.88e-08 1.1e-07 9.58e-08 3.76e-08 3.3e-08 8.68e-08 8.96e-08 3.93e-08 5.06e-08 9.6e-08 8e-08 3.09e-08 4.27e-08 1.31e-07 4.7e-08 1.11e-08 8.79e-08 1.68e-08 1.26e-07 3.92e-09 4.77e-08