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Genes within 1Mb (chr6:133401389:AAG:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -550781 sc-eQTL 5.98e-02 -0.17 0.0899 0.393 B L1
ENSG00000079931 MOXD1 999914 sc-eQTL 2.01e-01 0.122 0.0954 0.393 B L1
ENSG00000079950 STX7 888191 sc-eQTL 4.25e-01 -0.0288 0.0361 0.393 B L1
ENSG00000112303 VNN2 637930 sc-eQTL 4.93e-01 -0.0466 0.0678 0.393 B L1
ENSG00000112306 RPS12 586820 sc-eQTL 6.60e-01 0.0181 0.041 0.393 B L1
ENSG00000118515 SGK1 -916723 sc-eQTL 1.69e-01 0.087 0.063 0.393 B L1
ENSG00000146409 SLC18B1 588050 sc-eQTL 5.43e-01 0.0526 0.0863 0.393 B L1
ENSG00000028839 TBPL1 -550781 sc-eQTL 3.49e-01 -0.0632 0.0673 0.393 CD4T L1
ENSG00000079950 STX7 888191 sc-eQTL 3.89e-01 -0.0605 0.07 0.393 CD4T L1
ENSG00000112303 VNN2 637930 sc-eQTL 9.81e-02 -0.1 0.0604 0.393 CD4T L1
ENSG00000112306 RPS12 586820 sc-eQTL 3.48e-01 0.0388 0.0412 0.393 CD4T L1
ENSG00000118515 SGK1 -916723 sc-eQTL 2.81e-01 0.0599 0.0554 0.393 CD4T L1
ENSG00000146409 SLC18B1 588050 sc-eQTL 9.19e-01 0.00854 0.0836 0.393 CD4T L1
ENSG00000028839 TBPL1 -550781 sc-eQTL 1.05e-01 -0.108 0.0664 0.393 CD8T L1
ENSG00000079950 STX7 888191 sc-eQTL 2.26e-01 -0.0845 0.0695 0.393 CD8T L1
ENSG00000112303 VNN2 637930 sc-eQTL 1.96e-01 -0.105 0.0811 0.393 CD8T L1
ENSG00000112306 RPS12 586820 sc-eQTL 5.50e-01 0.0167 0.0278 0.393 CD8T L1
ENSG00000118515 SGK1 -916723 sc-eQTL 5.20e-01 -0.0276 0.0428 0.393 CD8T L1
ENSG00000146409 SLC18B1 588050 sc-eQTL 5.40e-01 0.0516 0.0841 0.393 CD8T L1
ENSG00000028839 TBPL1 -550781 sc-eQTL 5.41e-01 -0.0628 0.103 0.387 DC L1
ENSG00000079950 STX7 888191 sc-eQTL 1.39e-01 -0.0941 0.0634 0.387 DC L1
ENSG00000093134 VNN3 666624 sc-eQTL 4.44e-01 -0.0605 0.079 0.387 DC L1
ENSG00000112299 VNN1 687334 sc-eQTL 7.93e-01 -0.0225 0.0854 0.387 DC L1
ENSG00000112303 VNN2 637930 sc-eQTL 5.98e-01 -0.0482 0.0913 0.387 DC L1
ENSG00000112306 RPS12 586820 sc-eQTL 1.53e-01 0.0731 0.0509 0.387 DC L1
ENSG00000118515 SGK1 -916723 sc-eQTL 5.33e-01 -0.037 0.0594 0.387 DC L1
ENSG00000146409 SLC18B1 588050 sc-eQTL 1.33e-01 0.122 0.0806 0.387 DC L1
ENSG00000286438 AL591115.1 298261 sc-eQTL 5.25e-01 -0.0469 0.0737 0.387 DC L1
ENSG00000286887 AL355881.1 -894912 sc-eQTL 3.60e-01 -0.0842 0.0918 0.387 DC L1
ENSG00000028839 TBPL1 -550781 sc-eQTL 5.12e-01 0.046 0.0701 0.393 Mono L1
ENSG00000079950 STX7 888191 sc-eQTL 6.24e-01 -0.023 0.0469 0.393 Mono L1
ENSG00000093134 VNN3 666624 sc-eQTL 6.24e-01 0.0396 0.0805 0.393 Mono L1
ENSG00000112299 VNN1 687334 sc-eQTL 9.24e-02 -0.146 0.0861 0.393 Mono L1
ENSG00000112303 VNN2 637930 sc-eQTL 4.57e-01 -0.0456 0.0611 0.393 Mono L1
ENSG00000112306 RPS12 586820 sc-eQTL 9.24e-01 0.0035 0.0367 0.393 Mono L1
ENSG00000118515 SGK1 -916723 sc-eQTL 7.71e-02 -0.0913 0.0514 0.393 Mono L1
ENSG00000146409 SLC18B1 588050 sc-eQTL 7.49e-01 0.0233 0.0725 0.393 Mono L1
ENSG00000286887 AL355881.1 -894912 sc-eQTL 4.65e-01 -0.0521 0.0712 0.393 Mono L1
ENSG00000028839 TBPL1 -550781 sc-eQTL 9.06e-01 0.00927 0.078 0.393 NK L1
ENSG00000079950 STX7 888191 sc-eQTL 2.00e-01 -0.0925 0.0719 0.393 NK L1
ENSG00000112303 VNN2 637930 sc-eQTL 3.50e-01 -0.084 0.0896 0.393 NK L1
ENSG00000112306 RPS12 586820 sc-eQTL 1.83e-01 0.0494 0.037 0.393 NK L1
ENSG00000118515 SGK1 -916723 sc-eQTL 5.02e-02 0.134 0.0681 0.393 NK L1
ENSG00000028839 TBPL1 -550781 sc-eQTL 1.29e-01 0.138 0.0903 0.393 Other_T L1
ENSG00000079950 STX7 888191 sc-eQTL 2.25e-01 -0.0867 0.0712 0.393 Other_T L1
ENSG00000112303 VNN2 637930 sc-eQTL 4.07e-01 -0.0716 0.0862 0.393 Other_T L1
ENSG00000112306 RPS12 586820 sc-eQTL 3.23e-01 0.0339 0.0342 0.393 Other_T L1
ENSG00000118515 SGK1 -916723 sc-eQTL 6.05e-01 0.0326 0.063 0.393 Other_T L1
ENSG00000146409 SLC18B1 588050 sc-eQTL 3.61e-01 -0.0856 0.0936 0.393 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -550781 sc-eQTL 8.85e-01 -0.0151 0.104 0.408 B_Activated L2
ENSG00000079931 MOXD1 999914 sc-eQTL 2.32e-01 0.113 0.0943 0.408 B_Activated L2
ENSG00000079950 STX7 888191 sc-eQTL 8.71e-01 -0.0144 0.0888 0.408 B_Activated L2
ENSG00000112303 VNN2 637930 sc-eQTL 9.63e-01 -0.00435 0.0945 0.408 B_Activated L2
ENSG00000112306 RPS12 586820 sc-eQTL 9.03e-01 -0.00618 0.0506 0.408 B_Activated L2
ENSG00000118515 SGK1 -916723 sc-eQTL 9.94e-01 -0.000678 0.0903 0.408 B_Activated L2
ENSG00000146409 SLC18B1 588050 sc-eQTL 5.37e-01 -0.0548 0.0886 0.408 B_Activated L2
ENSG00000028839 TBPL1 -550781 sc-eQTL 3.31e-01 -0.099 0.102 0.395 B_Intermediate L2
ENSG00000079931 MOXD1 999914 sc-eQTL 2.39e-01 -0.105 0.0891 0.395 B_Intermediate L2
ENSG00000079950 STX7 888191 sc-eQTL 6.05e-02 -0.109 0.058 0.395 B_Intermediate L2
ENSG00000112303 VNN2 637930 sc-eQTL 6.77e-01 -0.0368 0.088 0.395 B_Intermediate L2
ENSG00000112306 RPS12 586820 sc-eQTL 6.29e-01 0.0261 0.0539 0.395 B_Intermediate L2
ENSG00000118515 SGK1 -916723 sc-eQTL 3.52e-01 -0.0868 0.0931 0.395 B_Intermediate L2
ENSG00000146409 SLC18B1 588050 sc-eQTL 3.51e-01 0.0907 0.097 0.395 B_Intermediate L2
ENSG00000028839 TBPL1 -550781 sc-eQTL 8.56e-01 -0.0175 0.0961 0.39 B_Memory L2
ENSG00000079931 MOXD1 999914 sc-eQTL 1.97e-02 0.206 0.0875 0.39 B_Memory L2
ENSG00000079950 STX7 888191 sc-eQTL 3.69e-01 -0.0625 0.0694 0.39 B_Memory L2
ENSG00000112303 VNN2 637930 sc-eQTL 8.57e-01 -0.0164 0.091 0.39 B_Memory L2
ENSG00000112306 RPS12 586820 sc-eQTL 6.48e-01 0.02 0.0438 0.39 B_Memory L2
ENSG00000118515 SGK1 -916723 sc-eQTL 5.91e-01 -0.0433 0.0803 0.39 B_Memory L2
ENSG00000146409 SLC18B1 588050 sc-eQTL 1.14e-01 -0.144 0.0909 0.39 B_Memory L2
ENSG00000028839 TBPL1 -550781 sc-eQTL 1.87e-01 -0.121 0.0914 0.393 B_Naive1 L2
ENSG00000079931 MOXD1 999914 sc-eQTL 2.55e-01 0.115 0.101 0.393 B_Naive1 L2
ENSG00000079950 STX7 888191 sc-eQTL 5.43e-01 -0.0268 0.0441 0.393 B_Naive1 L2
ENSG00000112303 VNN2 637930 sc-eQTL 3.69e-01 0.077 0.0855 0.393 B_Naive1 L2
ENSG00000112306 RPS12 586820 sc-eQTL 3.73e-01 0.0435 0.0487 0.393 B_Naive1 L2
ENSG00000118515 SGK1 -916723 sc-eQTL 3.01e-01 0.079 0.0761 0.393 B_Naive1 L2
ENSG00000146409 SLC18B1 588050 sc-eQTL 6.05e-01 0.0487 0.0941 0.393 B_Naive1 L2
ENSG00000028839 TBPL1 -550781 sc-eQTL 1.70e-01 -0.133 0.0964 0.391 B_Naive2 L2
ENSG00000079931 MOXD1 999914 sc-eQTL 3.14e-01 0.095 0.0942 0.391 B_Naive2 L2
ENSG00000079950 STX7 888191 sc-eQTL 5.92e-01 -0.0276 0.0514 0.391 B_Naive2 L2
ENSG00000112303 VNN2 637930 sc-eQTL 2.70e-01 -0.104 0.0942 0.391 B_Naive2 L2
ENSG00000112306 RPS12 586820 sc-eQTL 8.29e-01 0.0108 0.05 0.391 B_Naive2 L2
ENSG00000118515 SGK1 -916723 sc-eQTL 6.19e-01 0.0439 0.0883 0.391 B_Naive2 L2
ENSG00000146409 SLC18B1 588050 sc-eQTL 7.05e-01 0.0362 0.0953 0.391 B_Naive2 L2
ENSG00000028839 TBPL1 -550781 sc-eQTL 9.77e-01 0.00274 0.0965 0.395 CD4_CTL L2
ENSG00000079950 STX7 888191 sc-eQTL 7.02e-01 0.0367 0.0958 0.395 CD4_CTL L2
ENSG00000112303 VNN2 637930 sc-eQTL 2.72e-02 -0.212 0.0954 0.395 CD4_CTL L2
ENSG00000112306 RPS12 586820 sc-eQTL 4.36e-01 0.0348 0.0446 0.395 CD4_CTL L2
ENSG00000118515 SGK1 -916723 sc-eQTL 3.47e-01 -0.0729 0.0772 0.395 CD4_CTL L2
ENSG00000146409 SLC18B1 588050 sc-eQTL 8.26e-01 -0.0199 0.09 0.395 CD4_CTL L2
ENSG00000028839 TBPL1 -550781 sc-eQTL 7.39e-01 -0.0257 0.077 0.393 CD4_Naive L2
ENSG00000079950 STX7 888191 sc-eQTL 5.67e-01 0.0433 0.0755 0.393 CD4_Naive L2
ENSG00000112303 VNN2 637930 sc-eQTL 2.10e-01 -0.0876 0.0697 0.393 CD4_Naive L2
ENSG00000112306 RPS12 586820 sc-eQTL 3.03e-01 0.0467 0.0453 0.393 CD4_Naive L2
ENSG00000118515 SGK1 -916723 sc-eQTL 2.54e-01 0.0634 0.0554 0.393 CD4_Naive L2
ENSG00000146409 SLC18B1 588050 sc-eQTL 7.58e-01 0.0269 0.0873 0.393 CD4_Naive L2
ENSG00000028839 TBPL1 -550781 sc-eQTL 6.44e-01 -0.0381 0.0823 0.393 CD4_TCM L2
ENSG00000079950 STX7 888191 sc-eQTL 4.42e-02 -0.166 0.0821 0.393 CD4_TCM L2
ENSG00000112303 VNN2 637930 sc-eQTL 5.99e-01 -0.0431 0.0817 0.393 CD4_TCM L2
ENSG00000112306 RPS12 586820 sc-eQTL 3.30e-01 0.0413 0.0423 0.393 CD4_TCM L2
ENSG00000118515 SGK1 -916723 sc-eQTL 7.26e-01 0.0208 0.0593 0.393 CD4_TCM L2
ENSG00000146409 SLC18B1 588050 sc-eQTL 1.66e-01 -0.136 0.0977 0.393 CD4_TCM L2
ENSG00000028839 TBPL1 -550781 sc-eQTL 3.48e-01 -0.09 0.0957 0.393 CD4_TEM L2
ENSG00000079950 STX7 888191 sc-eQTL 3.95e-01 -0.0818 0.0959 0.393 CD4_TEM L2
ENSG00000112303 VNN2 637930 sc-eQTL 4.11e-01 -0.0758 0.092 0.393 CD4_TEM L2
ENSG00000112306 RPS12 586820 sc-eQTL 4.27e-01 0.0301 0.0377 0.393 CD4_TEM L2
ENSG00000118515 SGK1 -916723 sc-eQTL 9.74e-01 -0.00215 0.065 0.393 CD4_TEM L2
ENSG00000146409 SLC18B1 588050 sc-eQTL 2.73e-01 -0.103 0.0937 0.393 CD4_TEM L2
ENSG00000028839 TBPL1 -550781 sc-eQTL 6.59e-01 -0.0373 0.0846 0.393 CD8_CTL L2
ENSG00000079950 STX7 888191 sc-eQTL 5.12e-01 -0.0519 0.079 0.393 CD8_CTL L2
ENSG00000112303 VNN2 637930 sc-eQTL 2.65e-01 -0.1 0.0896 0.393 CD8_CTL L2
ENSG00000112306 RPS12 586820 sc-eQTL 8.08e-01 0.0117 0.0481 0.393 CD8_CTL L2
ENSG00000118515 SGK1 -916723 sc-eQTL 6.56e-01 -0.0362 0.0812 0.393 CD8_CTL L2
ENSG00000146409 SLC18B1 588050 sc-eQTL 9.56e-01 -0.0052 0.0932 0.393 CD8_CTL L2
ENSG00000028839 TBPL1 -550781 sc-eQTL 2.33e-01 -0.108 0.0905 0.393 CD8_Naive L2
ENSG00000079950 STX7 888191 sc-eQTL 1.34e-01 -0.145 0.0963 0.393 CD8_Naive L2
ENSG00000112303 VNN2 637930 sc-eQTL 3.50e-01 -0.078 0.0833 0.393 CD8_Naive L2
ENSG00000112306 RPS12 586820 sc-eQTL 9.02e-02 0.0808 0.0475 0.393 CD8_Naive L2
ENSG00000118515 SGK1 -916723 sc-eQTL 7.04e-01 0.0228 0.06 0.393 CD8_Naive L2
ENSG00000146409 SLC18B1 588050 sc-eQTL 1.87e-01 0.126 0.0955 0.393 CD8_Naive L2
ENSG00000028839 TBPL1 -550781 sc-eQTL 9.33e-01 0.00869 0.103 0.394 CD8_TCM L2
ENSG00000079950 STX7 888191 sc-eQTL 3.29e-01 -0.0935 0.0955 0.394 CD8_TCM L2
ENSG00000112303 VNN2 637930 sc-eQTL 8.17e-01 0.022 0.095 0.394 CD8_TCM L2
ENSG00000112306 RPS12 586820 sc-eQTL 2.05e-01 0.0586 0.0461 0.394 CD8_TCM L2
ENSG00000118515 SGK1 -916723 sc-eQTL 6.10e-01 -0.0391 0.0766 0.394 CD8_TCM L2
ENSG00000146409 SLC18B1 588050 sc-eQTL 9.95e-01 0.000608 0.101 0.394 CD8_TCM L2
ENSG00000028839 TBPL1 -550781 sc-eQTL 4.39e-01 -0.0724 0.0934 0.395 CD8_TEM L2
ENSG00000079950 STX7 888191 sc-eQTL 3.38e-01 0.0978 0.102 0.395 CD8_TEM L2
ENSG00000112303 VNN2 637930 sc-eQTL 6.10e-02 -0.19 0.101 0.395 CD8_TEM L2
ENSG00000112306 RPS12 586820 sc-eQTL 7.00e-01 -0.0211 0.0546 0.395 CD8_TEM L2
ENSG00000118515 SGK1 -916723 sc-eQTL 2.53e-02 -0.199 0.0884 0.395 CD8_TEM L2
ENSG00000146409 SLC18B1 588050 sc-eQTL 6.25e-01 -0.0505 0.103 0.395 CD8_TEM L2
ENSG00000028839 TBPL1 -550781 sc-eQTL 8.26e-02 0.164 0.094 0.392 MAIT L2
ENSG00000079950 STX7 888191 sc-eQTL 5.09e-01 -0.0594 0.0898 0.392 MAIT L2
ENSG00000112303 VNN2 637930 sc-eQTL 5.17e-01 -0.0593 0.0914 0.392 MAIT L2
ENSG00000112306 RPS12 586820 sc-eQTL 5.03e-01 0.0301 0.0449 0.392 MAIT L2
ENSG00000118515 SGK1 -916723 sc-eQTL 8.01e-01 0.016 0.0633 0.392 MAIT L2
ENSG00000146409 SLC18B1 588050 sc-eQTL 3.39e-01 -0.0902 0.0941 0.392 MAIT L2
ENSG00000028839 TBPL1 -550781 sc-eQTL 6.08e-01 0.0527 0.103 0.396 NK_CD56bright L2
ENSG00000079950 STX7 888191 sc-eQTL 3.94e-01 -0.0812 0.0951 0.396 NK_CD56bright L2
ENSG00000112303 VNN2 637930 sc-eQTL 9.73e-01 -0.00325 0.0968 0.396 NK_CD56bright L2
ENSG00000112306 RPS12 586820 sc-eQTL 3.53e-01 -0.05 0.0538 0.396 NK_CD56bright L2
ENSG00000118515 SGK1 -916723 sc-eQTL 1.23e-01 0.124 0.0801 0.396 NK_CD56bright L2
ENSG00000028839 TBPL1 -550781 sc-eQTL 1.10e-01 0.134 0.0833 0.392 NK_CD56dim L2
ENSG00000079950 STX7 888191 sc-eQTL 6.64e-01 -0.0333 0.0767 0.392 NK_CD56dim L2
ENSG00000112303 VNN2 637930 sc-eQTL 9.37e-01 0.00755 0.096 0.392 NK_CD56dim L2
ENSG00000112306 RPS12 586820 sc-eQTL 1.49e-01 0.0549 0.0379 0.392 NK_CD56dim L2
ENSG00000118515 SGK1 -916723 sc-eQTL 9.59e-01 -0.00437 0.0844 0.392 NK_CD56dim L2
ENSG00000028839 TBPL1 -550781 sc-eQTL 9.02e-01 -0.0129 0.105 0.393 NK_HLA L2
ENSG00000079950 STX7 888191 sc-eQTL 5.24e-01 -0.061 0.0956 0.393 NK_HLA L2
ENSG00000112303 VNN2 637930 sc-eQTL 3.77e-01 -0.0856 0.0966 0.393 NK_HLA L2
ENSG00000112306 RPS12 586820 sc-eQTL 8.37e-01 0.00929 0.0451 0.393 NK_HLA L2
ENSG00000118515 SGK1 -916723 sc-eQTL 3.99e-01 -0.0752 0.089 0.393 NK_HLA L2
ENSG00000028839 TBPL1 -550781 sc-eQTL 2.48e-01 -0.101 0.0868 0.392 NK_cytokine L2
ENSG00000079950 STX7 888191 sc-eQTL 2.75e-01 -0.092 0.0841 0.392 NK_cytokine L2
ENSG00000112303 VNN2 637930 sc-eQTL 1.65e-01 -0.131 0.0944 0.392 NK_cytokine L2
ENSG00000112306 RPS12 586820 sc-eQTL 6.04e-01 0.0267 0.0514 0.392 NK_cytokine L2
ENSG00000118515 SGK1 -916723 sc-eQTL 3.88e-03 0.245 0.0839 0.392 NK_cytokine L2
ENSG00000028839 TBPL1 -550781 sc-eQTL 6.42e-01 0.0552 0.118 0.4 PB L2
ENSG00000079931 MOXD1 999914 sc-eQTL 4.82e-01 0.0711 0.101 0.4 PB L2
ENSG00000079950 STX7 888191 sc-eQTL 3.53e-01 -0.0784 0.084 0.4 PB L2
ENSG00000112303 VNN2 637930 sc-eQTL 3.44e-01 -0.0974 0.103 0.4 PB L2
ENSG00000112306 RPS12 586820 sc-eQTL 4.56e-01 0.0437 0.0584 0.4 PB L2
ENSG00000118515 SGK1 -916723 sc-eQTL 3.40e-01 0.0903 0.0941 0.4 PB L2
ENSG00000146409 SLC18B1 588050 sc-eQTL 1.24e-01 -0.168 0.108 0.4 PB L2
ENSG00000028839 TBPL1 -550781 sc-eQTL 4.00e-01 0.0836 0.0991 0.396 Pro_T L2
ENSG00000079950 STX7 888191 sc-eQTL 5.08e-01 -0.0587 0.0885 0.396 Pro_T L2
ENSG00000112303 VNN2 637930 sc-eQTL 3.74e-01 0.0845 0.0949 0.396 Pro_T L2
ENSG00000112306 RPS12 586820 sc-eQTL 4.16e-01 0.0293 0.0359 0.396 Pro_T L2
ENSG00000118515 SGK1 -916723 sc-eQTL 4.31e-01 -0.0568 0.072 0.396 Pro_T L2
ENSG00000146409 SLC18B1 588050 sc-eQTL 1.80e-01 -0.125 0.0927 0.396 Pro_T L2
ENSG00000028839 TBPL1 -550781 sc-eQTL 9.58e-02 -0.163 0.0977 0.393 Treg L2
ENSG00000079950 STX7 888191 sc-eQTL 9.86e-01 -0.00163 0.0927 0.393 Treg L2
ENSG00000112303 VNN2 637930 sc-eQTL 6.89e-01 -0.0312 0.078 0.393 Treg L2
ENSG00000112306 RPS12 586820 sc-eQTL 7.99e-01 -0.0088 0.0345 0.393 Treg L2
ENSG00000118515 SGK1 -916723 sc-eQTL 2.73e-01 -0.0796 0.0725 0.393 Treg L2
ENSG00000146409 SLC18B1 588050 sc-eQTL 1.13e-01 0.154 0.0969 0.393 Treg L2
ENSG00000028839 TBPL1 -550781 sc-eQTL 9.89e-01 0.00149 0.103 0.393 cDC L2
ENSG00000079950 STX7 888191 sc-eQTL 7.35e-01 -0.0275 0.081 0.393 cDC L2
ENSG00000093134 VNN3 666624 sc-eQTL 1.75e-01 -0.109 0.0801 0.393 cDC L2
ENSG00000112299 VNN1 687334 sc-eQTL 3.57e-01 -0.0872 0.0944 0.393 cDC L2
ENSG00000112303 VNN2 637930 sc-eQTL 3.58e-02 -0.193 0.0911 0.393 cDC L2
ENSG00000112306 RPS12 586820 sc-eQTL 3.56e-01 0.0421 0.0454 0.393 cDC L2
ENSG00000118515 SGK1 -916723 sc-eQTL 2.70e-01 -0.0846 0.0765 0.393 cDC L2
ENSG00000146409 SLC18B1 588050 sc-eQTL 9.03e-01 -0.011 0.0902 0.393 cDC L2
ENSG00000286438 AL591115.1 298261 sc-eQTL 5.81e-01 -0.0399 0.072 0.393 cDC L2
ENSG00000286887 AL355881.1 -894912 sc-eQTL 9.05e-01 -0.0106 0.0887 0.393 cDC L2
ENSG00000028839 TBPL1 -550781 sc-eQTL 8.07e-01 0.0195 0.0799 0.393 cMono_IL1B L2
ENSG00000079950 STX7 888191 sc-eQTL 5.02e-01 -0.0407 0.0606 0.393 cMono_IL1B L2
ENSG00000093134 VNN3 666624 sc-eQTL 5.29e-01 0.054 0.0856 0.393 cMono_IL1B L2
ENSG00000112299 VNN1 687334 sc-eQTL 6.12e-02 -0.161 0.0858 0.393 cMono_IL1B L2
ENSG00000112303 VNN2 637930 sc-eQTL 6.70e-01 -0.0295 0.0691 0.393 cMono_IL1B L2
ENSG00000112306 RPS12 586820 sc-eQTL 9.34e-01 -0.00316 0.0384 0.393 cMono_IL1B L2
ENSG00000118515 SGK1 -916723 sc-eQTL 2.06e-01 -0.0724 0.0571 0.393 cMono_IL1B L2
ENSG00000146409 SLC18B1 588050 sc-eQTL 3.37e-01 0.0712 0.0739 0.393 cMono_IL1B L2
ENSG00000286887 AL355881.1 -894912 sc-eQTL 7.47e-01 -0.0249 0.0771 0.393 cMono_IL1B L2
ENSG00000028839 TBPL1 -550781 sc-eQTL 4.89e-01 0.0627 0.0904 0.393 cMono_S100A L2
ENSG00000079950 STX7 888191 sc-eQTL 2.05e-01 -0.0828 0.0651 0.393 cMono_S100A L2
ENSG00000093134 VNN3 666624 sc-eQTL 8.77e-01 0.0126 0.0816 0.393 cMono_S100A L2
ENSG00000112299 VNN1 687334 sc-eQTL 1.32e-01 -0.133 0.0881 0.393 cMono_S100A L2
ENSG00000112303 VNN2 637930 sc-eQTL 8.83e-01 -0.00858 0.058 0.393 cMono_S100A L2
ENSG00000112306 RPS12 586820 sc-eQTL 5.14e-01 0.0273 0.0418 0.393 cMono_S100A L2
ENSG00000118515 SGK1 -916723 sc-eQTL 3.47e-01 -0.0449 0.0477 0.393 cMono_S100A L2
ENSG00000146409 SLC18B1 588050 sc-eQTL 7.24e-01 0.0274 0.0773 0.393 cMono_S100A L2
ENSG00000286887 AL355881.1 -894912 sc-eQTL 9.55e-01 0.00425 0.0757 0.393 cMono_S100A L2
ENSG00000028839 TBPL1 -550781 sc-eQTL 6.39e-01 0.0612 0.13 0.397 gdT L2
ENSG00000079950 STX7 888191 sc-eQTL 1.17e-01 -0.175 0.111 0.397 gdT L2
ENSG00000112303 VNN2 637930 sc-eQTL 6.12e-01 0.0631 0.124 0.397 gdT L2
ENSG00000112306 RPS12 586820 sc-eQTL 1.10e-02 0.119 0.0462 0.397 gdT L2
ENSG00000118515 SGK1 -916723 sc-eQTL 6.21e-02 -0.166 0.0881 0.397 gdT L2
ENSG00000146409 SLC18B1 588050 sc-eQTL 9.57e-01 0.00662 0.122 0.397 gdT L2
ENSG00000028839 TBPL1 -550781 sc-eQTL 3.25e-01 0.0902 0.0913 0.393 intMono L2
ENSG00000079950 STX7 888191 sc-eQTL 2.47e-01 -0.101 0.0871 0.393 intMono L2
ENSG00000093134 VNN3 666624 sc-eQTL 4.90e-01 -0.061 0.0882 0.393 intMono L2
ENSG00000112299 VNN1 687334 sc-eQTL 1.99e-01 -0.112 0.0869 0.393 intMono L2
ENSG00000112303 VNN2 637930 sc-eQTL 1.14e-01 -0.14 0.0881 0.393 intMono L2
ENSG00000112306 RPS12 586820 sc-eQTL 7.36e-01 0.013 0.0386 0.393 intMono L2
ENSG00000118515 SGK1 -916723 sc-eQTL 6.61e-01 -0.0284 0.0648 0.393 intMono L2
ENSG00000146409 SLC18B1 588050 sc-eQTL 9.32e-01 -0.00804 0.0939 0.393 intMono L2
ENSG00000286887 AL355881.1 -894912 sc-eQTL 2.95e-01 -0.0941 0.0896 0.393 intMono L2
ENSG00000028839 TBPL1 -550781 sc-eQTL 2.04e-01 -0.123 0.0968 0.4 ncMono L2
ENSG00000079950 STX7 888191 sc-eQTL 2.83e-01 0.0705 0.0655 0.4 ncMono L2
ENSG00000093134 VNN3 666624 sc-eQTL 6.07e-01 -0.0478 0.0927 0.4 ncMono L2
ENSG00000112299 VNN1 687334 sc-eQTL 8.16e-01 0.0215 0.0921 0.4 ncMono L2
ENSG00000112303 VNN2 637930 sc-eQTL 6.65e-02 -0.162 0.0878 0.4 ncMono L2
ENSG00000112306 RPS12 586820 sc-eQTL 6.45e-01 0.0205 0.0444 0.4 ncMono L2
ENSG00000118515 SGK1 -916723 sc-eQTL 2.72e-02 -0.138 0.062 0.4 ncMono L2
ENSG00000146409 SLC18B1 588050 sc-eQTL 3.14e-01 -0.079 0.0782 0.4 ncMono L2
ENSG00000286887 AL355881.1 -894912 sc-eQTL 6.00e-01 0.0435 0.0829 0.4 ncMono L2
ENSG00000028839 TBPL1 -550781 sc-eQTL 6.50e-01 0.053 0.117 0.395 pDC L2
ENSG00000079950 STX7 888191 sc-eQTL 8.30e-02 -0.134 0.0769 0.395 pDC L2
ENSG00000093134 VNN3 666624 sc-eQTL 5.34e-01 0.0486 0.0781 0.395 pDC L2
ENSG00000112299 VNN1 687334 sc-eQTL 8.56e-01 0.0144 0.0796 0.395 pDC L2
ENSG00000112303 VNN2 637930 sc-eQTL 1.07e-02 0.24 0.0928 0.395 pDC L2
ENSG00000112306 RPS12 586820 sc-eQTL 3.24e-01 0.0643 0.065 0.395 pDC L2
ENSG00000118515 SGK1 -916723 sc-eQTL 8.44e-01 0.013 0.0663 0.395 pDC L2
ENSG00000146409 SLC18B1 588050 sc-eQTL 5.13e-02 0.187 0.0954 0.395 pDC L2
ENSG00000286438 AL591115.1 298261 sc-eQTL 6.84e-01 -0.0377 0.0924 0.395 pDC L2
ENSG00000286887 AL355881.1 -894912 sc-eQTL 8.70e-01 0.0134 0.082 0.395 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -550781 sc-eQTL 9.20e-02 -0.164 0.0968 0.393 B_Memory LOneK1K
ENSG00000079931 MOXD1 999914 sc-eQTL 9.11e-02 0.16 0.094 0.393 B_Memory LOneK1K
ENSG00000079950 STX7 888191 sc-eQTL 3.98e-02 -0.11 0.0531 0.393 B_Memory LOneK1K
ENSG00000112303 VNN2 637930 sc-eQTL 1.43e-01 -0.124 0.0844 0.393 B_Memory LOneK1K
ENSG00000112306 RPS12 586820 sc-eQTL 2.82e-01 0.052 0.0482 0.393 B_Memory LOneK1K
ENSG00000118515 SGK1 -916723 sc-eQTL 3.73e-01 -0.0674 0.0754 0.393 B_Memory LOneK1K
ENSG00000146409 SLC18B1 588050 sc-eQTL 8.72e-01 -0.0143 0.0887 0.393 B_Memory LOneK1K
ENSG00000028839 TBPL1 -550781 sc-eQTL 7.23e-02 -0.164 0.0908 0.393 B_Naive LOneK1K
ENSG00000079931 MOXD1 999914 sc-eQTL 3.03e-01 0.103 0.1 0.393 B_Naive LOneK1K
ENSG00000079950 STX7 888191 sc-eQTL 6.59e-01 -0.0182 0.0412 0.393 B_Naive LOneK1K
ENSG00000112303 VNN2 637930 sc-eQTL 9.23e-01 -0.00774 0.0801 0.393 B_Naive LOneK1K
ENSG00000112306 RPS12 586820 sc-eQTL 6.82e-01 0.0198 0.0484 0.393 B_Naive LOneK1K
ENSG00000118515 SGK1 -916723 sc-eQTL 2.92e-01 0.079 0.0748 0.393 B_Naive LOneK1K
ENSG00000146409 SLC18B1 588050 sc-eQTL 3.91e-01 0.0784 0.0912 0.393 B_Naive LOneK1K
ENSG00000028839 TBPL1 -550781 sc-eQTL 4.06e-01 0.0606 0.0728 0.393 CD14_Mono LOneK1K
ENSG00000079950 STX7 888191 sc-eQTL 3.29e-01 -0.0495 0.0506 0.393 CD14_Mono LOneK1K
ENSG00000093134 VNN3 666624 sc-eQTL 5.53e-01 0.049 0.0826 0.393 CD14_Mono LOneK1K
ENSG00000112299 VNN1 687334 sc-eQTL 4.64e-02 -0.171 0.0854 0.393 CD14_Mono LOneK1K
ENSG00000112303 VNN2 637930 sc-eQTL 6.06e-01 -0.0295 0.0569 0.393 CD14_Mono LOneK1K
ENSG00000112306 RPS12 586820 sc-eQTL 9.76e-01 0.00117 0.0391 0.393 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -916723 sc-eQTL 1.89e-01 -0.0699 0.053 0.393 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 588050 sc-eQTL 4.24e-01 0.0556 0.0694 0.393 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -894912 sc-eQTL 8.13e-01 -0.0173 0.0729 0.393 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -550781 sc-eQTL 8.45e-01 -0.0184 0.0941 0.392 CD16_Mono LOneK1K
ENSG00000079950 STX7 888191 sc-eQTL 6.80e-01 0.0256 0.0621 0.392 CD16_Mono LOneK1K
ENSG00000093134 VNN3 666624 sc-eQTL 7.02e-01 -0.035 0.0913 0.392 CD16_Mono LOneK1K
ENSG00000112299 VNN1 687334 sc-eQTL 8.61e-01 -0.0158 0.0905 0.392 CD16_Mono LOneK1K
ENSG00000112303 VNN2 637930 sc-eQTL 6.33e-02 -0.158 0.0847 0.392 CD16_Mono LOneK1K
ENSG00000112306 RPS12 586820 sc-eQTL 5.25e-01 0.023 0.0362 0.392 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -916723 sc-eQTL 1.24e-01 -0.0843 0.0545 0.392 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 588050 sc-eQTL 9.79e-01 0.0023 0.0879 0.392 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -894912 sc-eQTL 4.39e-01 -0.0616 0.0794 0.392 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -550781 sc-eQTL 8.50e-01 0.0146 0.0771 0.392 NK_CD56dim LOneK1K
ENSG00000079950 STX7 888191 sc-eQTL 2.41e-01 -0.0848 0.0722 0.392 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 637930 sc-eQTL 3.32e-01 -0.089 0.0914 0.392 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 586820 sc-eQTL 1.40e-01 0.055 0.0372 0.392 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -916723 sc-eQTL 7.38e-02 0.138 0.0767 0.392 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079950 STX7 888191 eQTL 0.0316 -0.0349 0.0162 0.0 0.0 0.395
ENSG00000112299 VNN1 687334 pQTL 0.00061 -0.123 0.0359 0.0 0.0 0.39

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079950 STX7 888191 3.71e-07 6.56e-07 7.45e-08 4.08e-07 9.93e-08 1.32e-07 3.25e-07 5.48e-08 1.86e-07 1.03e-07 4.39e-07 1.86e-07 7.19e-07 1.01e-07 5.72e-08 1.14e-07 5.57e-08 2.33e-07 7.76e-08 4.3e-08 1.18e-07 2.99e-07 1.73e-07 2.87e-08 2.36e-07 2.01e-07 1.29e-07 9.92e-08 1.34e-07 1.81e-07 1.43e-07 3.64e-08 2.92e-08 1.15e-07 2.82e-07 3.95e-08 5.31e-08 9.25e-08 4.83e-08 7.78e-08 5.37e-08 2.71e-07 5.2e-08 1.83e-07 5.75e-08 9.86e-09 1.21e-07 1.88e-09 4.79e-08