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Genes within 1Mb (chr6:133395625:G:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -556545 sc-eQTL 9.67e-02 -0.249 0.149 0.904 B L1
ENSG00000079931 MOXD1 994150 sc-eQTL 3.86e-01 0.138 0.158 0.904 B L1
ENSG00000079950 STX7 882427 sc-eQTL 1.38e-01 0.0886 0.0594 0.904 B L1
ENSG00000112303 VNN2 632166 sc-eQTL 2.68e-01 -0.124 0.112 0.904 B L1
ENSG00000112306 RPS12 581056 sc-eQTL 1.93e-01 0.0883 0.0677 0.904 B L1
ENSG00000118515 SGK1 -922487 sc-eQTL 2.84e-01 -0.112 0.104 0.904 B L1
ENSG00000146409 SLC18B1 582286 sc-eQTL 9.95e-01 -0.000939 0.143 0.904 B L1
ENSG00000028839 TBPL1 -556545 sc-eQTL 3.62e-01 -0.1 0.11 0.904 CD4T L1
ENSG00000079950 STX7 882427 sc-eQTL 3.79e-01 -0.101 0.114 0.904 CD4T L1
ENSG00000112303 VNN2 632166 sc-eQTL 7.48e-01 -0.0318 0.0991 0.904 CD4T L1
ENSG00000112306 RPS12 581056 sc-eQTL 7.07e-01 0.0253 0.0674 0.904 CD4T L1
ENSG00000118515 SGK1 -922487 sc-eQTL 9.88e-01 -0.00142 0.0906 0.904 CD4T L1
ENSG00000146409 SLC18B1 582286 sc-eQTL 1.23e-01 -0.21 0.136 0.904 CD4T L1
ENSG00000028839 TBPL1 -556545 sc-eQTL 6.08e-02 -0.204 0.108 0.904 CD8T L1
ENSG00000079950 STX7 882427 sc-eQTL 1.14e-01 -0.18 0.113 0.904 CD8T L1
ENSG00000112303 VNN2 632166 sc-eQTL 2.06e-01 -0.168 0.133 0.904 CD8T L1
ENSG00000112306 RPS12 581056 sc-eQTL 4.54e-01 0.0342 0.0455 0.904 CD8T L1
ENSG00000118515 SGK1 -922487 sc-eQTL 3.56e-01 -0.0648 0.0701 0.904 CD8T L1
ENSG00000146409 SLC18B1 582286 sc-eQTL 7.82e-01 -0.0381 0.138 0.904 CD8T L1
ENSG00000028839 TBPL1 -556545 sc-eQTL 8.38e-01 -0.0339 0.165 0.901 DC L1
ENSG00000079950 STX7 882427 sc-eQTL 9.03e-01 -0.0125 0.103 0.901 DC L1
ENSG00000093134 VNN3 660860 sc-eQTL 1.24e-01 -0.195 0.127 0.901 DC L1
ENSG00000112299 VNN1 681570 sc-eQTL 6.55e-01 -0.0614 0.137 0.901 DC L1
ENSG00000112303 VNN2 632166 sc-eQTL 3.63e-01 -0.134 0.147 0.901 DC L1
ENSG00000112306 RPS12 581056 sc-eQTL 3.19e-01 -0.0822 0.0823 0.901 DC L1
ENSG00000118515 SGK1 -922487 sc-eQTL 3.97e-02 -0.196 0.0947 0.901 DC L1
ENSG00000146409 SLC18B1 582286 sc-eQTL 4.25e-01 -0.104 0.13 0.901 DC L1
ENSG00000286438 AL591115.1 292497 sc-eQTL 5.23e-01 -0.0759 0.119 0.901 DC L1
ENSG00000286887 AL355881.1 -900676 sc-eQTL 6.22e-01 -0.073 0.148 0.901 DC L1
ENSG00000028839 TBPL1 -556545 sc-eQTL 7.34e-01 0.0392 0.115 0.904 Mono L1
ENSG00000079950 STX7 882427 sc-eQTL 1.94e-01 0.1 0.0769 0.904 Mono L1
ENSG00000093134 VNN3 660860 sc-eQTL 8.71e-01 0.0216 0.132 0.904 Mono L1
ENSG00000112299 VNN1 681570 sc-eQTL 6.87e-01 0.0575 0.143 0.904 Mono L1
ENSG00000112303 VNN2 632166 sc-eQTL 7.60e-02 -0.178 0.0999 0.904 Mono L1
ENSG00000112306 RPS12 581056 sc-eQTL 7.17e-01 -0.0219 0.0603 0.904 Mono L1
ENSG00000118515 SGK1 -922487 sc-eQTL 3.43e-01 -0.0807 0.085 0.904 Mono L1
ENSG00000146409 SLC18B1 582286 sc-eQTL 4.86e-01 -0.0832 0.119 0.904 Mono L1
ENSG00000286887 AL355881.1 -900676 sc-eQTL 9.78e-02 -0.194 0.116 0.904 Mono L1
ENSG00000028839 TBPL1 -556545 sc-eQTL 3.87e-01 0.111 0.128 0.903 NK L1
ENSG00000079950 STX7 882427 sc-eQTL 8.19e-02 0.206 0.118 0.903 NK L1
ENSG00000112303 VNN2 632166 sc-eQTL 9.99e-01 -0.000241 0.148 0.903 NK L1
ENSG00000112306 RPS12 581056 sc-eQTL 7.75e-01 -0.0175 0.0612 0.903 NK L1
ENSG00000118515 SGK1 -922487 sc-eQTL 7.41e-01 -0.0375 0.113 0.903 NK L1
ENSG00000028839 TBPL1 -556545 sc-eQTL 5.37e-01 0.0931 0.151 0.904 Other_T L1
ENSG00000079950 STX7 882427 sc-eQTL 7.34e-01 -0.0404 0.119 0.904 Other_T L1
ENSG00000112303 VNN2 632166 sc-eQTL 3.00e-01 -0.149 0.143 0.904 Other_T L1
ENSG00000112306 RPS12 581056 sc-eQTL 6.65e-01 -0.0247 0.0568 0.904 Other_T L1
ENSG00000118515 SGK1 -922487 sc-eQTL 7.46e-01 -0.0339 0.105 0.904 Other_T L1
ENSG00000146409 SLC18B1 582286 sc-eQTL 5.93e-02 -0.293 0.154 0.904 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -556545 sc-eQTL 5.49e-01 0.11 0.183 0.911 B_Activated L2
ENSG00000079931 MOXD1 994150 sc-eQTL 4.83e-01 0.117 0.167 0.911 B_Activated L2
ENSG00000079950 STX7 882427 sc-eQTL 8.70e-01 0.0256 0.157 0.911 B_Activated L2
ENSG00000112303 VNN2 632166 sc-eQTL 4.56e-01 0.124 0.167 0.911 B_Activated L2
ENSG00000112306 RPS12 581056 sc-eQTL 8.97e-01 -0.0116 0.0894 0.911 B_Activated L2
ENSG00000118515 SGK1 -922487 sc-eQTL 8.42e-01 0.0319 0.159 0.911 B_Activated L2
ENSG00000146409 SLC18B1 582286 sc-eQTL 7.06e-01 0.0591 0.157 0.911 B_Activated L2
ENSG00000028839 TBPL1 -556545 sc-eQTL 3.11e-01 0.168 0.165 0.903 B_Intermediate L2
ENSG00000079931 MOXD1 994150 sc-eQTL 5.62e-01 -0.0843 0.145 0.903 B_Intermediate L2
ENSG00000079950 STX7 882427 sc-eQTL 4.75e-01 0.068 0.095 0.903 B_Intermediate L2
ENSG00000112303 VNN2 632166 sc-eQTL 6.33e-01 0.0686 0.143 0.903 B_Intermediate L2
ENSG00000112306 RPS12 581056 sc-eQTL 1.73e-01 0.119 0.0873 0.903 B_Intermediate L2
ENSG00000118515 SGK1 -922487 sc-eQTL 7.82e-02 -0.266 0.151 0.903 B_Intermediate L2
ENSG00000146409 SLC18B1 582286 sc-eQTL 7.97e-01 -0.0407 0.158 0.903 B_Intermediate L2
ENSG00000028839 TBPL1 -556545 sc-eQTL 9.10e-01 0.018 0.16 0.903 B_Memory L2
ENSG00000079931 MOXD1 994150 sc-eQTL 5.24e-01 -0.0938 0.147 0.903 B_Memory L2
ENSG00000079950 STX7 882427 sc-eQTL 1.03e-03 0.375 0.113 0.903 B_Memory L2
ENSG00000112303 VNN2 632166 sc-eQTL 2.10e-01 -0.189 0.151 0.903 B_Memory L2
ENSG00000112306 RPS12 581056 sc-eQTL 7.84e-01 0.02 0.0728 0.903 B_Memory L2
ENSG00000118515 SGK1 -922487 sc-eQTL 5.31e-01 -0.0838 0.133 0.903 B_Memory L2
ENSG00000146409 SLC18B1 582286 sc-eQTL 6.47e-01 0.0697 0.152 0.903 B_Memory L2
ENSG00000028839 TBPL1 -556545 sc-eQTL 1.91e-02 -0.349 0.148 0.904 B_Naive1 L2
ENSG00000079931 MOXD1 994150 sc-eQTL 3.78e-01 0.145 0.164 0.904 B_Naive1 L2
ENSG00000079950 STX7 882427 sc-eQTL 1.55e-01 0.102 0.0716 0.904 B_Naive1 L2
ENSG00000112303 VNN2 632166 sc-eQTL 2.16e-01 -0.173 0.139 0.904 B_Naive1 L2
ENSG00000112306 RPS12 581056 sc-eQTL 1.15e-01 0.125 0.0791 0.904 B_Naive1 L2
ENSG00000118515 SGK1 -922487 sc-eQTL 7.84e-01 0.0341 0.124 0.904 B_Naive1 L2
ENSG00000146409 SLC18B1 582286 sc-eQTL 8.09e-01 0.0372 0.154 0.904 B_Naive1 L2
ENSG00000028839 TBPL1 -556545 sc-eQTL 3.28e-02 -0.343 0.16 0.903 B_Naive2 L2
ENSG00000079931 MOXD1 994150 sc-eQTL 8.79e-01 0.0239 0.157 0.903 B_Naive2 L2
ENSG00000079950 STX7 882427 sc-eQTL 3.42e-01 0.0814 0.0855 0.903 B_Naive2 L2
ENSG00000112303 VNN2 632166 sc-eQTL 9.04e-01 0.019 0.157 0.903 B_Naive2 L2
ENSG00000112306 RPS12 581056 sc-eQTL 5.68e-02 0.158 0.0826 0.903 B_Naive2 L2
ENSG00000118515 SGK1 -922487 sc-eQTL 5.53e-01 0.0873 0.147 0.903 B_Naive2 L2
ENSG00000146409 SLC18B1 582286 sc-eQTL 2.31e-01 -0.19 0.158 0.903 B_Naive2 L2
ENSG00000028839 TBPL1 -556545 sc-eQTL 9.49e-01 0.00987 0.154 0.9 CD4_CTL L2
ENSG00000079950 STX7 882427 sc-eQTL 5.75e-01 -0.0858 0.153 0.9 CD4_CTL L2
ENSG00000112303 VNN2 632166 sc-eQTL 6.30e-01 -0.0746 0.154 0.9 CD4_CTL L2
ENSG00000112306 RPS12 581056 sc-eQTL 6.54e-01 0.032 0.0713 0.9 CD4_CTL L2
ENSG00000118515 SGK1 -922487 sc-eQTL 1.72e-01 -0.169 0.123 0.9 CD4_CTL L2
ENSG00000146409 SLC18B1 582286 sc-eQTL 8.09e-01 0.0349 0.144 0.9 CD4_CTL L2
ENSG00000028839 TBPL1 -556545 sc-eQTL 1.09e-01 -0.201 0.125 0.904 CD4_Naive L2
ENSG00000079950 STX7 882427 sc-eQTL 3.66e-01 -0.111 0.123 0.904 CD4_Naive L2
ENSG00000112303 VNN2 632166 sc-eQTL 5.16e-01 -0.0741 0.114 0.904 CD4_Naive L2
ENSG00000112306 RPS12 581056 sc-eQTL 8.60e-01 0.0131 0.0739 0.904 CD4_Naive L2
ENSG00000118515 SGK1 -922487 sc-eQTL 9.08e-01 -0.0104 0.0905 0.904 CD4_Naive L2
ENSG00000146409 SLC18B1 582286 sc-eQTL 5.17e-02 -0.276 0.141 0.904 CD4_Naive L2
ENSG00000028839 TBPL1 -556545 sc-eQTL 8.94e-01 0.0178 0.134 0.904 CD4_TCM L2
ENSG00000079950 STX7 882427 sc-eQTL 6.09e-01 -0.0691 0.135 0.904 CD4_TCM L2
ENSG00000112303 VNN2 632166 sc-eQTL 8.12e-01 -0.0317 0.133 0.904 CD4_TCM L2
ENSG00000112306 RPS12 581056 sc-eQTL 4.90e-01 0.0477 0.0689 0.904 CD4_TCM L2
ENSG00000118515 SGK1 -922487 sc-eQTL 4.48e-01 -0.0732 0.0964 0.904 CD4_TCM L2
ENSG00000146409 SLC18B1 582286 sc-eQTL 3.28e-01 -0.156 0.159 0.904 CD4_TCM L2
ENSG00000028839 TBPL1 -556545 sc-eQTL 3.59e-01 0.143 0.156 0.904 CD4_TEM L2
ENSG00000079950 STX7 882427 sc-eQTL 2.76e-01 -0.17 0.156 0.904 CD4_TEM L2
ENSG00000112303 VNN2 632166 sc-eQTL 5.89e-01 -0.0812 0.15 0.904 CD4_TEM L2
ENSG00000112306 RPS12 581056 sc-eQTL 9.07e-01 0.00717 0.0615 0.904 CD4_TEM L2
ENSG00000118515 SGK1 -922487 sc-eQTL 4.31e-01 -0.0833 0.106 0.904 CD4_TEM L2
ENSG00000146409 SLC18B1 582286 sc-eQTL 6.78e-01 0.0635 0.153 0.904 CD4_TEM L2
ENSG00000028839 TBPL1 -556545 sc-eQTL 8.01e-01 0.0348 0.138 0.904 CD8_CTL L2
ENSG00000079950 STX7 882427 sc-eQTL 5.48e-01 -0.0777 0.129 0.904 CD8_CTL L2
ENSG00000112303 VNN2 632166 sc-eQTL 8.85e-01 -0.0213 0.147 0.904 CD8_CTL L2
ENSG00000112306 RPS12 581056 sc-eQTL 7.88e-01 0.0212 0.0786 0.904 CD8_CTL L2
ENSG00000118515 SGK1 -922487 sc-eQTL 9.21e-01 -0.0132 0.133 0.904 CD8_CTL L2
ENSG00000146409 SLC18B1 582286 sc-eQTL 1.07e-01 -0.245 0.151 0.904 CD8_CTL L2
ENSG00000028839 TBPL1 -556545 sc-eQTL 5.09e-02 -0.285 0.145 0.904 CD8_Naive L2
ENSG00000079950 STX7 882427 sc-eQTL 2.70e-01 -0.172 0.155 0.904 CD8_Naive L2
ENSG00000112303 VNN2 632166 sc-eQTL 7.20e-02 -0.241 0.133 0.904 CD8_Naive L2
ENSG00000112306 RPS12 581056 sc-eQTL 7.82e-02 0.135 0.0764 0.904 CD8_Naive L2
ENSG00000118515 SGK1 -922487 sc-eQTL 7.30e-01 -0.0334 0.0966 0.904 CD8_Naive L2
ENSG00000146409 SLC18B1 582286 sc-eQTL 8.39e-01 -0.0314 0.154 0.904 CD8_Naive L2
ENSG00000028839 TBPL1 -556545 sc-eQTL 4.97e-02 -0.324 0.164 0.903 CD8_TCM L2
ENSG00000079950 STX7 882427 sc-eQTL 8.23e-01 0.0343 0.153 0.903 CD8_TCM L2
ENSG00000112303 VNN2 632166 sc-eQTL 8.50e-01 0.0289 0.152 0.903 CD8_TCM L2
ENSG00000112306 RPS12 581056 sc-eQTL 6.47e-01 0.034 0.0741 0.903 CD8_TCM L2
ENSG00000118515 SGK1 -922487 sc-eQTL 4.59e-01 -0.0911 0.123 0.903 CD8_TCM L2
ENSG00000146409 SLC18B1 582286 sc-eQTL 3.43e-01 -0.154 0.162 0.903 CD8_TCM L2
ENSG00000028839 TBPL1 -556545 sc-eQTL 5.77e-01 -0.0839 0.15 0.9 CD8_TEM L2
ENSG00000079950 STX7 882427 sc-eQTL 9.12e-01 0.0181 0.164 0.9 CD8_TEM L2
ENSG00000112303 VNN2 632166 sc-eQTL 5.90e-01 -0.0879 0.163 0.9 CD8_TEM L2
ENSG00000112306 RPS12 581056 sc-eQTL 9.22e-01 0.00855 0.0877 0.9 CD8_TEM L2
ENSG00000118515 SGK1 -922487 sc-eQTL 1.96e-01 -0.186 0.143 0.9 CD8_TEM L2
ENSG00000146409 SLC18B1 582286 sc-eQTL 6.81e-01 0.0681 0.166 0.9 CD8_TEM L2
ENSG00000028839 TBPL1 -556545 sc-eQTL 7.11e-01 -0.0576 0.155 0.903 MAIT L2
ENSG00000079950 STX7 882427 sc-eQTL 2.59e-01 -0.166 0.147 0.903 MAIT L2
ENSG00000112303 VNN2 632166 sc-eQTL 5.26e-01 -0.0951 0.15 0.903 MAIT L2
ENSG00000112306 RPS12 581056 sc-eQTL 9.11e-01 0.00825 0.0738 0.903 MAIT L2
ENSG00000118515 SGK1 -922487 sc-eQTL 4.69e-01 -0.0752 0.104 0.903 MAIT L2
ENSG00000146409 SLC18B1 582286 sc-eQTL 2.80e-02 -0.338 0.153 0.903 MAIT L2
ENSG00000028839 TBPL1 -556545 sc-eQTL 7.68e-01 0.0489 0.166 0.902 NK_CD56bright L2
ENSG00000079950 STX7 882427 sc-eQTL 8.07e-01 -0.0375 0.154 0.902 NK_CD56bright L2
ENSG00000112303 VNN2 632166 sc-eQTL 1.69e-01 -0.214 0.156 0.902 NK_CD56bright L2
ENSG00000112306 RPS12 581056 sc-eQTL 9.84e-02 -0.144 0.0865 0.902 NK_CD56bright L2
ENSG00000118515 SGK1 -922487 sc-eQTL 7.33e-01 0.0444 0.13 0.902 NK_CD56bright L2
ENSG00000028839 TBPL1 -556545 sc-eQTL 9.69e-02 0.23 0.138 0.903 NK_CD56dim L2
ENSG00000079950 STX7 882427 sc-eQTL 3.24e-01 0.126 0.127 0.903 NK_CD56dim L2
ENSG00000112303 VNN2 632166 sc-eQTL 2.84e-01 0.17 0.159 0.903 NK_CD56dim L2
ENSG00000112306 RPS12 581056 sc-eQTL 8.58e-01 -0.0113 0.0632 0.903 NK_CD56dim L2
ENSG00000118515 SGK1 -922487 sc-eQTL 2.80e-01 -0.151 0.14 0.903 NK_CD56dim L2
ENSG00000028839 TBPL1 -556545 sc-eQTL 6.01e-01 0.0904 0.173 0.904 NK_HLA L2
ENSG00000079950 STX7 882427 sc-eQTL 6.34e-01 0.0749 0.157 0.904 NK_HLA L2
ENSG00000112303 VNN2 632166 sc-eQTL 4.39e-01 -0.123 0.159 0.904 NK_HLA L2
ENSG00000112306 RPS12 581056 sc-eQTL 3.18e-01 -0.0741 0.074 0.904 NK_HLA L2
ENSG00000118515 SGK1 -922487 sc-eQTL 4.65e-01 -0.107 0.146 0.904 NK_HLA L2
ENSG00000028839 TBPL1 -556545 sc-eQTL 7.72e-01 0.0421 0.145 0.903 NK_cytokine L2
ENSG00000079950 STX7 882427 sc-eQTL 7.98e-02 0.246 0.139 0.903 NK_cytokine L2
ENSG00000112303 VNN2 632166 sc-eQTL 8.50e-01 -0.0298 0.158 0.903 NK_cytokine L2
ENSG00000112306 RPS12 581056 sc-eQTL 3.60e-01 -0.0785 0.0856 0.903 NK_cytokine L2
ENSG00000118515 SGK1 -922487 sc-eQTL 6.16e-01 -0.0716 0.143 0.903 NK_cytokine L2
ENSG00000028839 TBPL1 -556545 sc-eQTL 8.27e-01 -0.0457 0.208 0.915 PB L2
ENSG00000079931 MOXD1 994150 sc-eQTL 4.64e-01 0.13 0.177 0.915 PB L2
ENSG00000079950 STX7 882427 sc-eQTL 5.45e-01 -0.09 0.148 0.915 PB L2
ENSG00000112303 VNN2 632166 sc-eQTL 3.91e-01 -0.156 0.181 0.915 PB L2
ENSG00000112306 RPS12 581056 sc-eQTL 9.97e-01 0.000434 0.103 0.915 PB L2
ENSG00000118515 SGK1 -922487 sc-eQTL 7.45e-01 0.0541 0.166 0.915 PB L2
ENSG00000146409 SLC18B1 582286 sc-eQTL 5.16e-01 -0.125 0.193 0.915 PB L2
ENSG00000028839 TBPL1 -556545 sc-eQTL 1.47e-01 0.234 0.161 0.907 Pro_T L2
ENSG00000079950 STX7 882427 sc-eQTL 4.48e-01 0.11 0.144 0.907 Pro_T L2
ENSG00000112303 VNN2 632166 sc-eQTL 6.36e-01 0.0733 0.155 0.907 Pro_T L2
ENSG00000112306 RPS12 581056 sc-eQTL 1.99e-01 -0.0753 0.0584 0.907 Pro_T L2
ENSG00000118515 SGK1 -922487 sc-eQTL 5.60e-01 0.0685 0.117 0.907 Pro_T L2
ENSG00000146409 SLC18B1 582286 sc-eQTL 5.50e-01 0.0908 0.152 0.907 Pro_T L2
ENSG00000028839 TBPL1 -556545 sc-eQTL 4.03e-01 -0.133 0.159 0.904 Treg L2
ENSG00000079950 STX7 882427 sc-eQTL 6.11e-01 0.0763 0.15 0.904 Treg L2
ENSG00000112303 VNN2 632166 sc-eQTL 3.69e-01 0.113 0.126 0.904 Treg L2
ENSG00000112306 RPS12 581056 sc-eQTL 8.32e-01 -0.0118 0.0557 0.904 Treg L2
ENSG00000118515 SGK1 -922487 sc-eQTL 3.69e-01 0.106 0.117 0.904 Treg L2
ENSG00000146409 SLC18B1 582286 sc-eQTL 3.21e-01 -0.156 0.157 0.904 Treg L2
ENSG00000028839 TBPL1 -556545 sc-eQTL 1.66e-01 -0.227 0.163 0.895 cDC L2
ENSG00000079950 STX7 882427 sc-eQTL 6.66e-01 0.0556 0.129 0.895 cDC L2
ENSG00000093134 VNN3 660860 sc-eQTL 3.98e-01 -0.108 0.128 0.895 cDC L2
ENSG00000112299 VNN1 681570 sc-eQTL 9.74e-01 0.00495 0.15 0.895 cDC L2
ENSG00000112303 VNN2 632166 sc-eQTL 6.61e-02 -0.268 0.145 0.895 cDC L2
ENSG00000112306 RPS12 581056 sc-eQTL 6.79e-01 0.03 0.0723 0.895 cDC L2
ENSG00000118515 SGK1 -922487 sc-eQTL 5.29e-04 -0.416 0.118 0.895 cDC L2
ENSG00000146409 SLC18B1 582286 sc-eQTL 1.83e-01 -0.191 0.143 0.895 cDC L2
ENSG00000286438 AL591115.1 292497 sc-eQTL 2.17e-01 -0.141 0.114 0.895 cDC L2
ENSG00000286887 AL355881.1 -900676 sc-eQTL 5.61e-01 -0.0819 0.141 0.895 cDC L2
ENSG00000028839 TBPL1 -556545 sc-eQTL 9.43e-01 0.00937 0.131 0.904 cMono_IL1B L2
ENSG00000079950 STX7 882427 sc-eQTL 7.96e-01 0.0257 0.0995 0.904 cMono_IL1B L2
ENSG00000093134 VNN3 660860 sc-eQTL 9.59e-01 -0.00724 0.141 0.904 cMono_IL1B L2
ENSG00000112299 VNN1 681570 sc-eQTL 9.09e-01 -0.0163 0.142 0.904 cMono_IL1B L2
ENSG00000112303 VNN2 632166 sc-eQTL 3.71e-01 -0.102 0.113 0.904 cMono_IL1B L2
ENSG00000112306 RPS12 581056 sc-eQTL 6.39e-01 -0.0296 0.063 0.904 cMono_IL1B L2
ENSG00000118515 SGK1 -922487 sc-eQTL 1.71e-01 -0.129 0.0936 0.904 cMono_IL1B L2
ENSG00000146409 SLC18B1 582286 sc-eQTL 7.40e-01 0.0404 0.122 0.904 cMono_IL1B L2
ENSG00000286887 AL355881.1 -900676 sc-eQTL 3.24e-01 -0.125 0.126 0.904 cMono_IL1B L2
ENSG00000028839 TBPL1 -556545 sc-eQTL 9.17e-01 0.0156 0.149 0.904 cMono_S100A L2
ENSG00000079950 STX7 882427 sc-eQTL 3.12e-02 0.231 0.107 0.904 cMono_S100A L2
ENSG00000093134 VNN3 660860 sc-eQTL 7.11e-01 0.05 0.135 0.904 cMono_S100A L2
ENSG00000112299 VNN1 681570 sc-eQTL 4.39e-01 0.113 0.146 0.904 cMono_S100A L2
ENSG00000112303 VNN2 632166 sc-eQTL 1.27e-01 -0.146 0.0952 0.904 cMono_S100A L2
ENSG00000112306 RPS12 581056 sc-eQTL 8.99e-01 0.00877 0.0689 0.904 cMono_S100A L2
ENSG00000118515 SGK1 -922487 sc-eQTL 7.86e-01 -0.0215 0.0788 0.904 cMono_S100A L2
ENSG00000146409 SLC18B1 582286 sc-eQTL 2.43e-01 -0.149 0.127 0.904 cMono_S100A L2
ENSG00000286887 AL355881.1 -900676 sc-eQTL 5.24e-02 -0.241 0.124 0.904 cMono_S100A L2
ENSG00000028839 TBPL1 -556545 sc-eQTL 9.14e-01 0.022 0.202 0.903 gdT L2
ENSG00000079950 STX7 882427 sc-eQTL 3.52e-01 0.162 0.173 0.903 gdT L2
ENSG00000112303 VNN2 632166 sc-eQTL 2.79e-01 -0.208 0.192 0.903 gdT L2
ENSG00000112306 RPS12 581056 sc-eQTL 6.49e-01 0.0335 0.0733 0.903 gdT L2
ENSG00000118515 SGK1 -922487 sc-eQTL 7.87e-01 0.0375 0.138 0.903 gdT L2
ENSG00000146409 SLC18B1 582286 sc-eQTL 4.29e-01 -0.15 0.189 0.903 gdT L2
ENSG00000028839 TBPL1 -556545 sc-eQTL 6.12e-01 0.0768 0.151 0.9 intMono L2
ENSG00000079950 STX7 882427 sc-eQTL 4.04e-01 0.121 0.144 0.9 intMono L2
ENSG00000093134 VNN3 660860 sc-eQTL 9.87e-01 -0.00234 0.146 0.9 intMono L2
ENSG00000112299 VNN1 681570 sc-eQTL 5.58e-01 0.0845 0.144 0.9 intMono L2
ENSG00000112303 VNN2 632166 sc-eQTL 2.10e-01 -0.184 0.146 0.9 intMono L2
ENSG00000112306 RPS12 581056 sc-eQTL 8.55e-02 -0.109 0.0633 0.9 intMono L2
ENSG00000118515 SGK1 -922487 sc-eQTL 7.14e-01 -0.0393 0.107 0.9 intMono L2
ENSG00000146409 SLC18B1 582286 sc-eQTL 9.31e-03 -0.401 0.153 0.9 intMono L2
ENSG00000286887 AL355881.1 -900676 sc-eQTL 1.08e-01 -0.238 0.148 0.9 intMono L2
ENSG00000028839 TBPL1 -556545 sc-eQTL 4.24e-01 -0.128 0.16 0.903 ncMono L2
ENSG00000079950 STX7 882427 sc-eQTL 6.60e-01 -0.0477 0.108 0.903 ncMono L2
ENSG00000093134 VNN3 660860 sc-eQTL 3.13e-03 -0.448 0.15 0.903 ncMono L2
ENSG00000112299 VNN1 681570 sc-eQTL 9.64e-01 -0.00683 0.152 0.903 ncMono L2
ENSG00000112303 VNN2 632166 sc-eQTL 2.92e-02 -0.317 0.144 0.903 ncMono L2
ENSG00000112306 RPS12 581056 sc-eQTL 2.86e-01 0.0781 0.073 0.903 ncMono L2
ENSG00000118515 SGK1 -922487 sc-eQTL 5.67e-01 -0.0593 0.104 0.903 ncMono L2
ENSG00000146409 SLC18B1 582286 sc-eQTL 3.51e-01 0.121 0.129 0.903 ncMono L2
ENSG00000286887 AL355881.1 -900676 sc-eQTL 4.36e-01 0.107 0.137 0.903 ncMono L2
ENSG00000028839 TBPL1 -556545 sc-eQTL 6.13e-01 0.0941 0.186 0.898 pDC L2
ENSG00000079950 STX7 882427 sc-eQTL 3.24e-01 -0.122 0.123 0.898 pDC L2
ENSG00000093134 VNN3 660860 sc-eQTL 1.98e-01 -0.16 0.124 0.898 pDC L2
ENSG00000112299 VNN1 681570 sc-eQTL 2.30e-01 -0.152 0.126 0.898 pDC L2
ENSG00000112303 VNN2 632166 sc-eQTL 2.54e-01 0.172 0.15 0.898 pDC L2
ENSG00000112306 RPS12 581056 sc-eQTL 1.60e-02 -0.249 0.102 0.898 pDC L2
ENSG00000118515 SGK1 -922487 sc-eQTL 5.72e-01 -0.0598 0.106 0.898 pDC L2
ENSG00000146409 SLC18B1 582286 sc-eQTL 4.23e-01 -0.124 0.154 0.898 pDC L2
ENSG00000286438 AL591115.1 292497 sc-eQTL 8.86e-01 -0.0212 0.147 0.898 pDC L2
ENSG00000286887 AL355881.1 -900676 sc-eQTL 7.32e-01 0.0448 0.131 0.898 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -556545 sc-eQTL 2.46e-01 0.185 0.159 0.904 B_Memory LOneK1K
ENSG00000079931 MOXD1 994150 sc-eQTL 6.07e-01 0.0797 0.155 0.904 B_Memory LOneK1K
ENSG00000079950 STX7 882427 sc-eQTL 9.42e-03 0.226 0.0863 0.904 B_Memory LOneK1K
ENSG00000112303 VNN2 632166 sc-eQTL 5.32e-01 -0.0868 0.139 0.904 B_Memory LOneK1K
ENSG00000112306 RPS12 581056 sc-eQTL 2.08e-01 0.0994 0.0787 0.904 B_Memory LOneK1K
ENSG00000118515 SGK1 -922487 sc-eQTL 2.65e-01 -0.138 0.123 0.904 B_Memory LOneK1K
ENSG00000146409 SLC18B1 582286 sc-eQTL 8.33e-01 0.0306 0.145 0.904 B_Memory LOneK1K
ENSG00000028839 TBPL1 -556545 sc-eQTL 3.40e-04 -0.534 0.147 0.904 B_Naive LOneK1K
ENSG00000079931 MOXD1 994150 sc-eQTL 3.46e-01 0.156 0.166 0.904 B_Naive LOneK1K
ENSG00000079950 STX7 882427 sc-eQTL 5.84e-02 0.129 0.0676 0.904 B_Naive LOneK1K
ENSG00000112303 VNN2 632166 sc-eQTL 3.15e-01 -0.133 0.132 0.904 B_Naive LOneK1K
ENSG00000112306 RPS12 581056 sc-eQTL 1.24e-01 0.123 0.0796 0.904 B_Naive LOneK1K
ENSG00000118515 SGK1 -922487 sc-eQTL 9.29e-01 0.011 0.124 0.904 B_Naive LOneK1K
ENSG00000146409 SLC18B1 582286 sc-eQTL 5.72e-01 -0.0853 0.151 0.904 B_Naive LOneK1K
ENSG00000028839 TBPL1 -556545 sc-eQTL 7.66e-01 0.0356 0.119 0.904 CD14_Mono LOneK1K
ENSG00000079950 STX7 882427 sc-eQTL 1.47e-01 0.12 0.0827 0.904 CD14_Mono LOneK1K
ENSG00000093134 VNN3 660860 sc-eQTL 9.63e-01 0.00623 0.135 0.904 CD14_Mono LOneK1K
ENSG00000112299 VNN1 681570 sc-eQTL 7.85e-01 0.0386 0.141 0.904 CD14_Mono LOneK1K
ENSG00000112303 VNN2 632166 sc-eQTL 1.66e-01 -0.129 0.0929 0.904 CD14_Mono LOneK1K
ENSG00000112306 RPS12 581056 sc-eQTL 5.64e-01 -0.0369 0.064 0.904 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -922487 sc-eQTL 2.23e-01 -0.106 0.0869 0.904 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 582286 sc-eQTL 6.35e-01 -0.0541 0.114 0.904 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -900676 sc-eQTL 7.33e-02 -0.213 0.119 0.904 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -556545 sc-eQTL 9.89e-01 -0.00222 0.155 0.903 CD16_Mono LOneK1K
ENSG00000079950 STX7 882427 sc-eQTL 4.95e-01 0.0697 0.102 0.903 CD16_Mono LOneK1K
ENSG00000093134 VNN3 660860 sc-eQTL 1.32e-01 -0.226 0.149 0.903 CD16_Mono LOneK1K
ENSG00000112299 VNN1 681570 sc-eQTL 9.64e-01 -0.00663 0.149 0.903 CD16_Mono LOneK1K
ENSG00000112303 VNN2 632166 sc-eQTL 1.44e-01 -0.205 0.14 0.903 CD16_Mono LOneK1K
ENSG00000112306 RPS12 581056 sc-eQTL 5.40e-01 0.0365 0.0595 0.903 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -922487 sc-eQTL 5.60e-01 -0.0526 0.0901 0.903 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 582286 sc-eQTL 8.14e-02 -0.251 0.144 0.903 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -900676 sc-eQTL 3.80e-01 -0.115 0.13 0.903 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -556545 sc-eQTL 1.88e-01 0.168 0.127 0.903 NK_CD56dim LOneK1K
ENSG00000079950 STX7 882427 sc-eQTL 6.33e-02 0.222 0.119 0.903 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 632166 sc-eQTL 7.24e-01 0.0535 0.152 0.903 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 581056 sc-eQTL 9.45e-01 -0.00429 0.0619 0.903 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -922487 sc-eQTL 3.64e-01 -0.116 0.128 0.903 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079950 STX7 882427 pQTL 0.0246 -0.0918 0.0408 0.0 0.0 0.0802
ENSG00000112299 VNN1 681570 pQTL 0.00795 0.168 0.063 0.0 0.0 0.0802
ENSG00000146409 SLC18B1 582286 eQTL 0.0253 -0.0869 0.0388 0.0 0.0 0.0819

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079950 STX7 882427 2.77e-07 1.36e-07 6.41e-08 2.05e-07 9.79e-08 9.05e-08 1.67e-07 5.4e-08 1.5e-07 6.4e-08 1.63e-07 1.01e-07 1.79e-07 7.95e-08 6.25e-08 7.49e-08 4.18e-08 1.51e-07 7.12e-08 4.8e-08 1.25e-07 1.24e-07 1.44e-07 2.91e-08 1.68e-07 1.26e-07 1.1e-07 9.61e-08 1.2e-07 1.06e-07 1.08e-07 3.78e-08 3.73e-08 8.72e-08 3.63e-08 3.49e-08 5.65e-08 9.17e-08 6.67e-08 3.75e-08 5.13e-08 1.4e-07 3.26e-08 1.22e-08 3.42e-08 1.89e-08 1.2e-07 1.92e-09 4.8e-08
ENSG00000118515 \N -922487 2.76e-07 1.34e-07 5.91e-08 1.97e-07 9.24e-08 9.91e-08 1.6e-07 5.37e-08 1.45e-07 5.67e-08 1.52e-07 9e-08 1.69e-07 7.64e-08 6.12e-08 7.53e-08 4.12e-08 1.4e-07 6.75e-08 4.3e-08 1.22e-07 1.27e-07 1.45e-07 2.93e-08 1.63e-07 1.21e-07 1.07e-07 9.57e-08 1.12e-07 1.05e-07 1.06e-07 3.99e-08 3.96e-08 8.23e-08 5.64e-08 3.62e-08 5.3e-08 8.63e-08 6.43e-08 4.19e-08 4.36e-08 1.36e-07 3.59e-08 5.77e-09 4.25e-08 1.84e-08 1.19e-07 1.89e-09 4.99e-08