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Genes within 1Mb (chr6:133395283:C:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -556887 sc-eQTL 1.07e-01 -0.149 0.0922 0.455 B L1
ENSG00000079931 MOXD1 993808 sc-eQTL 4.28e-01 0.0777 0.0978 0.455 B L1
ENSG00000079950 STX7 882085 sc-eQTL 9.41e-01 -0.00275 0.0369 0.455 B L1
ENSG00000112303 VNN2 631824 sc-eQTL 5.79e-01 -0.0386 0.0694 0.455 B L1
ENSG00000112306 RPS12 580714 sc-eQTL 3.88e-01 0.0363 0.0419 0.455 B L1
ENSG00000118515 SGK1 -922829 sc-eQTL 2.88e-01 0.0688 0.0646 0.455 B L1
ENSG00000146409 SLC18B1 581944 sc-eQTL 1.94e-01 0.115 0.088 0.455 B L1
ENSG00000028839 TBPL1 -556887 sc-eQTL 3.06e-01 -0.0703 0.0685 0.455 CD4T L1
ENSG00000079950 STX7 882085 sc-eQTL 2.44e-01 -0.0832 0.0712 0.455 CD4T L1
ENSG00000112303 VNN2 631824 sc-eQTL 1.10e-01 -0.0986 0.0615 0.455 CD4T L1
ENSG00000112306 RPS12 580714 sc-eQTL 3.76e-01 0.0373 0.042 0.455 CD4T L1
ENSG00000118515 SGK1 -922829 sc-eQTL 1.24e-01 0.0868 0.0562 0.455 CD4T L1
ENSG00000146409 SLC18B1 581944 sc-eQTL 4.15e-01 0.0693 0.0849 0.455 CD4T L1
ENSG00000028839 TBPL1 -556887 sc-eQTL 1.70e-01 -0.0935 0.068 0.455 CD8T L1
ENSG00000079950 STX7 882085 sc-eQTL 7.95e-02 -0.125 0.0708 0.455 CD8T L1
ENSG00000112303 VNN2 631824 sc-eQTL 1.10e-01 -0.133 0.0827 0.455 CD8T L1
ENSG00000112306 RPS12 580714 sc-eQTL 3.21e-01 0.0282 0.0284 0.455 CD8T L1
ENSG00000118515 SGK1 -922829 sc-eQTL 3.63e-01 -0.0399 0.0437 0.455 CD8T L1
ENSG00000146409 SLC18B1 581944 sc-eQTL 4.30e-01 0.0679 0.0858 0.455 CD8T L1
ENSG00000028839 TBPL1 -556887 sc-eQTL 9.73e-01 -0.00355 0.106 0.448 DC L1
ENSG00000079950 STX7 882085 sc-eQTL 1.71e-01 -0.0901 0.0655 0.448 DC L1
ENSG00000093134 VNN3 660518 sc-eQTL 4.08e-01 -0.0675 0.0815 0.448 DC L1
ENSG00000112299 VNN1 681228 sc-eQTL 5.74e-01 0.0496 0.088 0.448 DC L1
ENSG00000112303 VNN2 631824 sc-eQTL 5.98e-01 -0.0497 0.0942 0.448 DC L1
ENSG00000112306 RPS12 580714 sc-eQTL 1.28e-01 0.0803 0.0525 0.448 DC L1
ENSG00000118515 SGK1 -922829 sc-eQTL 6.53e-01 -0.0276 0.0613 0.448 DC L1
ENSG00000146409 SLC18B1 581944 sc-eQTL 4.09e-02 0.17 0.0828 0.448 DC L1
ENSG00000286438 AL591115.1 292155 sc-eQTL 8.29e-01 0.0164 0.0761 0.448 DC L1
ENSG00000286887 AL355881.1 -901018 sc-eQTL 2.35e-01 -0.113 0.0946 0.448 DC L1
ENSG00000028839 TBPL1 -556887 sc-eQTL 3.07e-01 0.0745 0.0728 0.455 Mono L1
ENSG00000079950 STX7 882085 sc-eQTL 8.04e-01 -0.0122 0.0488 0.455 Mono L1
ENSG00000093134 VNN3 660518 sc-eQTL 5.85e-01 0.0458 0.0837 0.455 Mono L1
ENSG00000112299 VNN1 681228 sc-eQTL 5.50e-01 -0.0539 0.0901 0.455 Mono L1
ENSG00000112303 VNN2 631824 sc-eQTL 5.56e-01 -0.0375 0.0636 0.455 Mono L1
ENSG00000112306 RPS12 580714 sc-eQTL 8.34e-01 0.008 0.0381 0.455 Mono L1
ENSG00000118515 SGK1 -922829 sc-eQTL 3.50e-01 -0.0503 0.0537 0.455 Mono L1
ENSG00000146409 SLC18B1 581944 sc-eQTL 8.31e-01 -0.0161 0.0754 0.455 Mono L1
ENSG00000286887 AL355881.1 -901018 sc-eQTL 6.71e-01 -0.0315 0.0741 0.455 Mono L1
ENSG00000028839 TBPL1 -556887 sc-eQTL 4.68e-01 -0.0573 0.0788 0.455 NK L1
ENSG00000079950 STX7 882085 sc-eQTL 2.87e-01 -0.0776 0.0727 0.455 NK L1
ENSG00000112303 VNN2 631824 sc-eQTL 7.38e-01 -0.0304 0.0907 0.455 NK L1
ENSG00000112306 RPS12 580714 sc-eQTL 9.06e-02 0.0634 0.0373 0.455 NK L1
ENSG00000118515 SGK1 -922829 sc-eQTL 1.37e-02 0.17 0.0684 0.455 NK L1
ENSG00000028839 TBPL1 -556887 sc-eQTL 9.89e-02 0.153 0.0924 0.455 Other_T L1
ENSG00000079950 STX7 882085 sc-eQTL 9.67e-01 0.00303 0.0732 0.455 Other_T L1
ENSG00000112303 VNN2 631824 sc-eQTL 2.84e-01 -0.0948 0.0882 0.455 Other_T L1
ENSG00000112306 RPS12 580714 sc-eQTL 5.79e-01 0.0195 0.0351 0.455 Other_T L1
ENSG00000118515 SGK1 -922829 sc-eQTL 3.52e-01 0.0601 0.0644 0.455 Other_T L1
ENSG00000146409 SLC18B1 581944 sc-eQTL 6.08e-01 -0.0494 0.096 0.455 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -556887 sc-eQTL 9.43e-01 -0.00778 0.109 0.469 B_Activated L2
ENSG00000079931 MOXD1 993808 sc-eQTL 1.60e-01 0.14 0.0994 0.469 B_Activated L2
ENSG00000079950 STX7 882085 sc-eQTL 6.33e-01 0.0447 0.0936 0.469 B_Activated L2
ENSG00000112303 VNN2 631824 sc-eQTL 2.67e-01 0.111 0.0994 0.469 B_Activated L2
ENSG00000112306 RPS12 580714 sc-eQTL 8.73e-01 -0.00854 0.0534 0.469 B_Activated L2
ENSG00000118515 SGK1 -922829 sc-eQTL 8.48e-01 0.0182 0.0953 0.469 B_Activated L2
ENSG00000146409 SLC18B1 581944 sc-eQTL 3.57e-01 -0.0862 0.0934 0.469 B_Activated L2
ENSG00000028839 TBPL1 -556887 sc-eQTL 3.03e-01 -0.108 0.104 0.457 B_Intermediate L2
ENSG00000079931 MOXD1 993808 sc-eQTL 3.39e-01 -0.0877 0.0915 0.457 B_Intermediate L2
ENSG00000079950 STX7 882085 sc-eQTL 1.17e-01 -0.0939 0.0597 0.457 B_Intermediate L2
ENSG00000112303 VNN2 631824 sc-eQTL 1.49e-01 -0.13 0.09 0.457 B_Intermediate L2
ENSG00000112306 RPS12 580714 sc-eQTL 5.10e-01 0.0365 0.0553 0.457 B_Intermediate L2
ENSG00000118515 SGK1 -922829 sc-eQTL 3.36e-01 -0.092 0.0955 0.457 B_Intermediate L2
ENSG00000146409 SLC18B1 581944 sc-eQTL 4.37e-02 0.2 0.0988 0.457 B_Intermediate L2
ENSG00000028839 TBPL1 -556887 sc-eQTL 2.82e-01 -0.107 0.099 0.453 B_Memory L2
ENSG00000079931 MOXD1 993808 sc-eQTL 1.55e-02 0.22 0.0903 0.453 B_Memory L2
ENSG00000079950 STX7 882085 sc-eQTL 9.14e-01 -0.0078 0.0719 0.453 B_Memory L2
ENSG00000112303 VNN2 631824 sc-eQTL 8.63e-01 0.0163 0.094 0.453 B_Memory L2
ENSG00000112306 RPS12 580714 sc-eQTL 5.45e-01 0.0274 0.0453 0.453 B_Memory L2
ENSG00000118515 SGK1 -922829 sc-eQTL 9.94e-01 -0.000654 0.0831 0.453 B_Memory L2
ENSG00000146409 SLC18B1 581944 sc-eQTL 3.85e-01 -0.0821 0.0943 0.453 B_Memory L2
ENSG00000028839 TBPL1 -556887 sc-eQTL 2.04e-01 -0.119 0.0932 0.455 B_Naive1 L2
ENSG00000079931 MOXD1 993808 sc-eQTL 5.34e-01 0.0641 0.103 0.455 B_Naive1 L2
ENSG00000079950 STX7 882085 sc-eQTL 5.69e-01 -0.0256 0.0449 0.455 B_Naive1 L2
ENSG00000112303 VNN2 631824 sc-eQTL 5.50e-01 0.0523 0.0873 0.455 B_Naive1 L2
ENSG00000112306 RPS12 580714 sc-eQTL 1.55e-01 0.0706 0.0495 0.455 B_Naive1 L2
ENSG00000118515 SGK1 -922829 sc-eQTL 1.05e-01 0.126 0.0773 0.455 B_Naive1 L2
ENSG00000146409 SLC18B1 581944 sc-eQTL 2.79e-01 0.104 0.0957 0.455 B_Naive1 L2
ENSG00000028839 TBPL1 -556887 sc-eQTL 4.69e-01 -0.073 0.101 0.453 B_Naive2 L2
ENSG00000079931 MOXD1 993808 sc-eQTL 9.69e-01 -0.00379 0.0982 0.453 B_Naive2 L2
ENSG00000079950 STX7 882085 sc-eQTL 9.27e-01 -0.0049 0.0535 0.453 B_Naive2 L2
ENSG00000112303 VNN2 631824 sc-eQTL 7.78e-01 -0.0277 0.0982 0.453 B_Naive2 L2
ENSG00000112306 RPS12 580714 sc-eQTL 4.53e-01 0.039 0.052 0.453 B_Naive2 L2
ENSG00000118515 SGK1 -922829 sc-eQTL 8.72e-01 -0.0148 0.0919 0.453 B_Naive2 L2
ENSG00000146409 SLC18B1 581944 sc-eQTL 6.47e-01 0.0455 0.0992 0.453 B_Naive2 L2
ENSG00000028839 TBPL1 -556887 sc-eQTL 4.29e-01 0.078 0.0984 0.459 CD4_CTL L2
ENSG00000079950 STX7 882085 sc-eQTL 6.76e-01 0.041 0.0978 0.459 CD4_CTL L2
ENSG00000112303 VNN2 631824 sc-eQTL 4.89e-03 -0.275 0.0967 0.459 CD4_CTL L2
ENSG00000112306 RPS12 580714 sc-eQTL 1.07e-01 0.0733 0.0453 0.459 CD4_CTL L2
ENSG00000118515 SGK1 -922829 sc-eQTL 8.97e-02 -0.134 0.0785 0.459 CD4_CTL L2
ENSG00000146409 SLC18B1 581944 sc-eQTL 3.77e-01 0.0813 0.0918 0.459 CD4_CTL L2
ENSG00000028839 TBPL1 -556887 sc-eQTL 2.80e-01 -0.0847 0.0783 0.455 CD4_Naive L2
ENSG00000079950 STX7 882085 sc-eQTL 9.99e-01 -9.75e-05 0.077 0.455 CD4_Naive L2
ENSG00000112303 VNN2 631824 sc-eQTL 4.68e-01 -0.0518 0.0712 0.455 CD4_Naive L2
ENSG00000112306 RPS12 580714 sc-eQTL 3.84e-01 0.0403 0.0462 0.455 CD4_Naive L2
ENSG00000118515 SGK1 -922829 sc-eQTL 1.51e-01 0.0812 0.0564 0.455 CD4_Naive L2
ENSG00000146409 SLC18B1 581944 sc-eQTL 7.23e-01 0.0315 0.089 0.455 CD4_Naive L2
ENSG00000028839 TBPL1 -556887 sc-eQTL 7.04e-01 -0.0319 0.084 0.455 CD4_TCM L2
ENSG00000079950 STX7 882085 sc-eQTL 5.55e-02 -0.161 0.0838 0.455 CD4_TCM L2
ENSG00000112303 VNN2 631824 sc-eQTL 1.24e-01 -0.128 0.0829 0.455 CD4_TCM L2
ENSG00000112306 RPS12 580714 sc-eQTL 2.96e-01 0.0452 0.0431 0.455 CD4_TCM L2
ENSG00000118515 SGK1 -922829 sc-eQTL 5.70e-01 0.0344 0.0604 0.455 CD4_TCM L2
ENSG00000146409 SLC18B1 581944 sc-eQTL 6.74e-01 -0.0421 0.1 0.455 CD4_TCM L2
ENSG00000028839 TBPL1 -556887 sc-eQTL 2.14e-01 -0.122 0.0983 0.455 CD4_TEM L2
ENSG00000079950 STX7 882085 sc-eQTL 3.63e-01 -0.0898 0.0986 0.455 CD4_TEM L2
ENSG00000112303 VNN2 631824 sc-eQTL 3.03e-01 -0.0975 0.0945 0.455 CD4_TEM L2
ENSG00000112306 RPS12 580714 sc-eQTL 5.34e-01 0.0242 0.0388 0.455 CD4_TEM L2
ENSG00000118515 SGK1 -922829 sc-eQTL 9.87e-01 -0.00105 0.0668 0.455 CD4_TEM L2
ENSG00000146409 SLC18B1 581944 sc-eQTL 7.41e-01 -0.0319 0.0966 0.455 CD4_TEM L2
ENSG00000028839 TBPL1 -556887 sc-eQTL 5.77e-01 0.0485 0.0868 0.455 CD8_CTL L2
ENSG00000079950 STX7 882085 sc-eQTL 1.72e-01 -0.111 0.0808 0.455 CD8_CTL L2
ENSG00000112303 VNN2 631824 sc-eQTL 7.11e-01 -0.0342 0.0922 0.455 CD8_CTL L2
ENSG00000112306 RPS12 580714 sc-eQTL 5.18e-01 0.0319 0.0493 0.455 CD8_CTL L2
ENSG00000118515 SGK1 -922829 sc-eQTL 5.26e-01 -0.0529 0.0833 0.455 CD8_CTL L2
ENSG00000146409 SLC18B1 581944 sc-eQTL 4.66e-01 -0.0697 0.0955 0.455 CD8_CTL L2
ENSG00000028839 TBPL1 -556887 sc-eQTL 1.04e-01 -0.15 0.0921 0.455 CD8_Naive L2
ENSG00000079950 STX7 882085 sc-eQTL 1.70e-01 -0.135 0.0983 0.455 CD8_Naive L2
ENSG00000112303 VNN2 631824 sc-eQTL 3.06e-02 -0.184 0.0843 0.455 CD8_Naive L2
ENSG00000112306 RPS12 580714 sc-eQTL 1.27e-01 0.0744 0.0485 0.455 CD8_Naive L2
ENSG00000118515 SGK1 -922829 sc-eQTL 8.56e-01 -0.0112 0.0612 0.455 CD8_Naive L2
ENSG00000146409 SLC18B1 581944 sc-eQTL 1.67e-02 0.233 0.0966 0.455 CD8_Naive L2
ENSG00000028839 TBPL1 -556887 sc-eQTL 9.47e-01 0.00712 0.107 0.456 CD8_TCM L2
ENSG00000079950 STX7 882085 sc-eQTL 3.97e-01 -0.0837 0.0985 0.456 CD8_TCM L2
ENSG00000112303 VNN2 631824 sc-eQTL 8.64e-01 0.0167 0.098 0.456 CD8_TCM L2
ENSG00000112306 RPS12 580714 sc-eQTL 4.63e-01 0.0351 0.0477 0.456 CD8_TCM L2
ENSG00000118515 SGK1 -922829 sc-eQTL 8.08e-01 -0.0192 0.0791 0.456 CD8_TCM L2
ENSG00000146409 SLC18B1 581944 sc-eQTL 6.30e-01 -0.0504 0.105 0.456 CD8_TCM L2
ENSG00000028839 TBPL1 -556887 sc-eQTL 3.53e-01 -0.0902 0.0968 0.454 CD8_TEM L2
ENSG00000079950 STX7 882085 sc-eQTL 4.03e-01 0.0885 0.106 0.454 CD8_TEM L2
ENSG00000112303 VNN2 631824 sc-eQTL 6.00e-02 -0.197 0.104 0.454 CD8_TEM L2
ENSG00000112306 RPS12 580714 sc-eQTL 9.47e-01 0.00377 0.0566 0.454 CD8_TEM L2
ENSG00000118515 SGK1 -922829 sc-eQTL 2.49e-02 -0.207 0.0916 0.454 CD8_TEM L2
ENSG00000146409 SLC18B1 581944 sc-eQTL 8.58e-01 -0.0192 0.107 0.454 CD8_TEM L2
ENSG00000028839 TBPL1 -556887 sc-eQTL 5.86e-02 0.184 0.0967 0.455 MAIT L2
ENSG00000079950 STX7 882085 sc-eQTL 2.87e-01 0.0985 0.0924 0.455 MAIT L2
ENSG00000112303 VNN2 631824 sc-eQTL 5.33e-01 -0.0587 0.0941 0.455 MAIT L2
ENSG00000112306 RPS12 580714 sc-eQTL 8.24e-01 0.0103 0.0463 0.455 MAIT L2
ENSG00000118515 SGK1 -922829 sc-eQTL 3.03e-01 0.0671 0.0651 0.455 MAIT L2
ENSG00000146409 SLC18B1 581944 sc-eQTL 6.54e-01 -0.0436 0.0971 0.455 MAIT L2
ENSG00000028839 TBPL1 -556887 sc-eQTL 6.92e-01 -0.0419 0.106 0.456 NK_CD56bright L2
ENSG00000079950 STX7 882085 sc-eQTL 3.00e-01 -0.102 0.0978 0.456 NK_CD56bright L2
ENSG00000112303 VNN2 631824 sc-eQTL 7.68e-01 0.0294 0.0995 0.456 NK_CD56bright L2
ENSG00000112306 RPS12 580714 sc-eQTL 9.99e-01 -4.46e-05 0.0555 0.456 NK_CD56bright L2
ENSG00000118515 SGK1 -922829 sc-eQTL 4.67e-02 0.164 0.0821 0.456 NK_CD56bright L2
ENSG00000028839 TBPL1 -556887 sc-eQTL 3.47e-01 0.0798 0.0846 0.455 NK_CD56dim L2
ENSG00000079950 STX7 882085 sc-eQTL 6.11e-01 -0.0395 0.0775 0.455 NK_CD56dim L2
ENSG00000112303 VNN2 631824 sc-eQTL 8.66e-01 0.0164 0.097 0.455 NK_CD56dim L2
ENSG00000112306 RPS12 580714 sc-eQTL 3.50e-02 0.0808 0.0381 0.455 NK_CD56dim L2
ENSG00000118515 SGK1 -922829 sc-eQTL 2.26e-01 0.103 0.085 0.455 NK_CD56dim L2
ENSG00000028839 TBPL1 -556887 sc-eQTL 7.69e-01 0.0314 0.107 0.457 NK_HLA L2
ENSG00000079950 STX7 882085 sc-eQTL 6.25e-01 -0.0477 0.0973 0.457 NK_HLA L2
ENSG00000112303 VNN2 631824 sc-eQTL 5.31e-01 -0.0617 0.0985 0.457 NK_HLA L2
ENSG00000112306 RPS12 580714 sc-eQTL 6.52e-01 0.0207 0.0459 0.457 NK_HLA L2
ENSG00000118515 SGK1 -922829 sc-eQTL 4.12e-01 -0.0745 0.0906 0.457 NK_HLA L2
ENSG00000028839 TBPL1 -556887 sc-eQTL 5.41e-02 -0.169 0.0875 0.455 NK_cytokine L2
ENSG00000079950 STX7 882085 sc-eQTL 8.57e-01 -0.0154 0.0855 0.455 NK_cytokine L2
ENSG00000112303 VNN2 631824 sc-eQTL 3.53e-01 -0.0893 0.096 0.455 NK_cytokine L2
ENSG00000112306 RPS12 580714 sc-eQTL 4.82e-01 0.0367 0.0521 0.455 NK_cytokine L2
ENSG00000118515 SGK1 -922829 sc-eQTL 2.01e-03 0.266 0.0849 0.455 NK_cytokine L2
ENSG00000028839 TBPL1 -556887 sc-eQTL 3.24e-01 0.12 0.121 0.452 PB L2
ENSG00000079931 MOXD1 993808 sc-eQTL 3.69e-01 0.0933 0.103 0.452 PB L2
ENSG00000079950 STX7 882085 sc-eQTL 1.66e-01 -0.12 0.0859 0.452 PB L2
ENSG00000112303 VNN2 631824 sc-eQTL 1.90e-01 -0.139 0.105 0.452 PB L2
ENSG00000112306 RPS12 580714 sc-eQTL 2.85e-01 0.0643 0.0598 0.452 PB L2
ENSG00000118515 SGK1 -922829 sc-eQTL 4.27e-01 0.0772 0.0968 0.452 PB L2
ENSG00000146409 SLC18B1 581944 sc-eQTL 7.75e-02 -0.198 0.111 0.452 PB L2
ENSG00000028839 TBPL1 -556887 sc-eQTL 3.91e-01 0.0868 0.101 0.457 Pro_T L2
ENSG00000079950 STX7 882085 sc-eQTL 9.62e-01 0.0043 0.0904 0.457 Pro_T L2
ENSG00000112303 VNN2 631824 sc-eQTL 1.01e-01 0.159 0.0963 0.457 Pro_T L2
ENSG00000112306 RPS12 580714 sc-eQTL 1.72e-01 0.05 0.0365 0.457 Pro_T L2
ENSG00000118515 SGK1 -922829 sc-eQTL 3.53e-01 -0.0684 0.0734 0.457 Pro_T L2
ENSG00000146409 SLC18B1 581944 sc-eQTL 4.31e-01 -0.0749 0.0948 0.457 Pro_T L2
ENSG00000028839 TBPL1 -556887 sc-eQTL 9.05e-02 -0.17 0.0998 0.455 Treg L2
ENSG00000079950 STX7 882085 sc-eQTL 9.99e-01 0.000111 0.0948 0.455 Treg L2
ENSG00000112303 VNN2 631824 sc-eQTL 6.00e-01 0.0418 0.0797 0.455 Treg L2
ENSG00000112306 RPS12 580714 sc-eQTL 3.43e-01 -0.0334 0.0352 0.455 Treg L2
ENSG00000118515 SGK1 -922829 sc-eQTL 6.03e-01 -0.0387 0.0743 0.455 Treg L2
ENSG00000146409 SLC18B1 581944 sc-eQTL 1.89e-02 0.233 0.0983 0.455 Treg L2
ENSG00000028839 TBPL1 -556887 sc-eQTL 6.73e-01 0.0457 0.108 0.454 cDC L2
ENSG00000079950 STX7 882085 sc-eQTL 8.85e-01 -0.0123 0.0849 0.454 cDC L2
ENSG00000093134 VNN3 660518 sc-eQTL 3.05e-01 -0.0866 0.0841 0.454 cDC L2
ENSG00000112299 VNN1 681228 sc-eQTL 9.43e-01 -0.00715 0.0992 0.454 cDC L2
ENSG00000112303 VNN2 631824 sc-eQTL 3.45e-02 -0.203 0.0954 0.454 cDC L2
ENSG00000112306 RPS12 580714 sc-eQTL 1.74e-01 0.0647 0.0475 0.454 cDC L2
ENSG00000118515 SGK1 -922829 sc-eQTL 4.09e-01 -0.0663 0.0802 0.454 cDC L2
ENSG00000146409 SLC18B1 581944 sc-eQTL 6.51e-01 0.0428 0.0944 0.454 cDC L2
ENSG00000286438 AL591115.1 292155 sc-eQTL 9.26e-01 0.00707 0.0755 0.454 cDC L2
ENSG00000286887 AL355881.1 -901018 sc-eQTL 9.79e-01 0.00249 0.0929 0.454 cDC L2
ENSG00000028839 TBPL1 -556887 sc-eQTL 7.32e-01 0.0286 0.0836 0.455 cMono_IL1B L2
ENSG00000079950 STX7 882085 sc-eQTL 7.78e-01 -0.0179 0.0634 0.455 cMono_IL1B L2
ENSG00000093134 VNN3 660518 sc-eQTL 3.93e-01 0.0765 0.0895 0.455 cMono_IL1B L2
ENSG00000112299 VNN1 681228 sc-eQTL 2.86e-01 -0.0965 0.0902 0.455 cMono_IL1B L2
ENSG00000112303 VNN2 631824 sc-eQTL 6.97e-01 -0.0282 0.0723 0.455 cMono_IL1B L2
ENSG00000112306 RPS12 580714 sc-eQTL 8.08e-01 0.00978 0.0402 0.455 cMono_IL1B L2
ENSG00000118515 SGK1 -922829 sc-eQTL 6.35e-01 -0.0285 0.0599 0.455 cMono_IL1B L2
ENSG00000146409 SLC18B1 581944 sc-eQTL 4.85e-01 0.0541 0.0774 0.455 cMono_IL1B L2
ENSG00000286887 AL355881.1 -901018 sc-eQTL 9.90e-01 0.000986 0.0807 0.455 cMono_IL1B L2
ENSG00000028839 TBPL1 -556887 sc-eQTL 5.01e-01 0.0638 0.0946 0.455 cMono_S100A L2
ENSG00000079950 STX7 882085 sc-eQTL 4.41e-01 -0.0527 0.0683 0.455 cMono_S100A L2
ENSG00000093134 VNN3 660518 sc-eQTL 9.47e-01 0.00567 0.0854 0.455 cMono_S100A L2
ENSG00000112299 VNN1 681228 sc-eQTL 6.38e-01 -0.0436 0.0927 0.455 cMono_S100A L2
ENSG00000112303 VNN2 631824 sc-eQTL 9.69e-01 0.00233 0.0608 0.455 cMono_S100A L2
ENSG00000112306 RPS12 580714 sc-eQTL 3.65e-01 0.0396 0.0437 0.455 cMono_S100A L2
ENSG00000118515 SGK1 -922829 sc-eQTL 8.85e-01 -0.00727 0.05 0.455 cMono_S100A L2
ENSG00000146409 SLC18B1 581944 sc-eQTL 9.07e-01 0.00943 0.081 0.455 cMono_S100A L2
ENSG00000286887 AL355881.1 -901018 sc-eQTL 7.30e-01 -0.0273 0.0792 0.455 cMono_S100A L2
ENSG00000028839 TBPL1 -556887 sc-eQTL 8.77e-01 0.0208 0.134 0.458 gdT L2
ENSG00000079950 STX7 882085 sc-eQTL 3.03e-01 -0.119 0.115 0.458 gdT L2
ENSG00000112303 VNN2 631824 sc-eQTL 7.88e-01 -0.0344 0.128 0.458 gdT L2
ENSG00000112306 RPS12 580714 sc-eQTL 1.34e-03 0.153 0.0469 0.458 gdT L2
ENSG00000118515 SGK1 -922829 sc-eQTL 1.81e-01 -0.123 0.0912 0.458 gdT L2
ENSG00000146409 SLC18B1 581944 sc-eQTL 8.65e-01 -0.0213 0.126 0.458 gdT L2
ENSG00000028839 TBPL1 -556887 sc-eQTL 2.20e-01 0.117 0.0954 0.456 intMono L2
ENSG00000079950 STX7 882085 sc-eQTL 1.70e-01 -0.125 0.091 0.456 intMono L2
ENSG00000093134 VNN3 660518 sc-eQTL 6.36e-01 -0.0437 0.0922 0.456 intMono L2
ENSG00000112299 VNN1 681228 sc-eQTL 3.65e-01 -0.0826 0.0911 0.456 intMono L2
ENSG00000112303 VNN2 631824 sc-eQTL 1.30e-01 -0.14 0.0922 0.456 intMono L2
ENSG00000112306 RPS12 580714 sc-eQTL 5.27e-01 0.0256 0.0403 0.456 intMono L2
ENSG00000118515 SGK1 -922829 sc-eQTL 4.55e-01 -0.0506 0.0677 0.456 intMono L2
ENSG00000146409 SLC18B1 581944 sc-eQTL 7.34e-01 -0.0335 0.0982 0.456 intMono L2
ENSG00000286887 AL355881.1 -901018 sc-eQTL 2.85e-01 -0.1 0.0937 0.456 intMono L2
ENSG00000028839 TBPL1 -556887 sc-eQTL 4.20e-01 -0.082 0.101 0.462 ncMono L2
ENSG00000079950 STX7 882085 sc-eQTL 2.80e-01 0.0741 0.0684 0.462 ncMono L2
ENSG00000093134 VNN3 660518 sc-eQTL 8.35e-01 -0.0202 0.0969 0.462 ncMono L2
ENSG00000112299 VNN1 681228 sc-eQTL 7.22e-01 0.0343 0.0961 0.462 ncMono L2
ENSG00000112303 VNN2 631824 sc-eQTL 1.22e-01 -0.143 0.0919 0.462 ncMono L2
ENSG00000112306 RPS12 580714 sc-eQTL 6.17e-01 0.0232 0.0463 0.462 ncMono L2
ENSG00000118515 SGK1 -922829 sc-eQTL 2.27e-01 -0.0792 0.0654 0.462 ncMono L2
ENSG00000146409 SLC18B1 581944 sc-eQTL 4.52e-01 -0.0616 0.0818 0.462 ncMono L2
ENSG00000286887 AL355881.1 -901018 sc-eQTL 1.72e-01 0.118 0.0862 0.462 ncMono L2
ENSG00000028839 TBPL1 -556887 sc-eQTL 6.60e-01 0.0534 0.121 0.46 pDC L2
ENSG00000079950 STX7 882085 sc-eQTL 2.88e-02 -0.175 0.0794 0.46 pDC L2
ENSG00000093134 VNN3 660518 sc-eQTL 7.00e-01 0.0313 0.0812 0.46 pDC L2
ENSG00000112299 VNN1 681228 sc-eQTL 4.91e-01 0.0569 0.0825 0.46 pDC L2
ENSG00000112303 VNN2 631824 sc-eQTL 1.50e-02 0.237 0.0965 0.46 pDC L2
ENSG00000112306 RPS12 580714 sc-eQTL 5.43e-01 0.0413 0.0677 0.46 pDC L2
ENSG00000118515 SGK1 -922829 sc-eQTL 4.04e-01 0.0574 0.0687 0.46 pDC L2
ENSG00000146409 SLC18B1 581944 sc-eQTL 8.44e-02 0.173 0.0993 0.46 pDC L2
ENSG00000286438 AL591115.1 292155 sc-eQTL 7.79e-01 0.027 0.0959 0.46 pDC L2
ENSG00000286887 AL355881.1 -901018 sc-eQTL 5.83e-01 0.0467 0.085 0.46 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -556887 sc-eQTL 9.18e-02 -0.169 0.0999 0.455 B_Memory LOneK1K
ENSG00000079931 MOXD1 993808 sc-eQTL 6.22e-02 0.182 0.0969 0.455 B_Memory LOneK1K
ENSG00000079950 STX7 882085 sc-eQTL 2.69e-01 -0.0611 0.0552 0.455 B_Memory LOneK1K
ENSG00000112303 VNN2 631824 sc-eQTL 1.75e-01 -0.118 0.0872 0.455 B_Memory LOneK1K
ENSG00000112306 RPS12 580714 sc-eQTL 3.08e-01 0.0509 0.0498 0.455 B_Memory LOneK1K
ENSG00000118515 SGK1 -922829 sc-eQTL 5.02e-01 -0.0524 0.0779 0.455 B_Memory LOneK1K
ENSG00000146409 SLC18B1 581944 sc-eQTL 3.28e-01 0.0895 0.0913 0.455 B_Memory LOneK1K
ENSG00000028839 TBPL1 -556887 sc-eQTL 2.09e-01 -0.118 0.0934 0.455 B_Naive LOneK1K
ENSG00000079931 MOXD1 993808 sc-eQTL 9.06e-01 0.0122 0.103 0.455 B_Naive LOneK1K
ENSG00000079950 STX7 882085 sc-eQTL 8.73e-01 -0.00677 0.0422 0.455 B_Naive LOneK1K
ENSG00000112303 VNN2 631824 sc-eQTL 8.19e-01 0.0188 0.082 0.455 B_Naive LOneK1K
ENSG00000112306 RPS12 580714 sc-eQTL 2.52e-01 0.0568 0.0495 0.455 B_Naive LOneK1K
ENSG00000118515 SGK1 -922829 sc-eQTL 2.12e-01 0.0957 0.0765 0.455 B_Naive LOneK1K
ENSG00000146409 SLC18B1 581944 sc-eQTL 2.43e-01 0.109 0.0933 0.455 B_Naive LOneK1K
ENSG00000028839 TBPL1 -556887 sc-eQTL 3.85e-01 0.0661 0.076 0.455 CD14_Mono LOneK1K
ENSG00000079950 STX7 882085 sc-eQTL 6.52e-01 -0.0239 0.0529 0.455 CD14_Mono LOneK1K
ENSG00000093134 VNN3 660518 sc-eQTL 4.86e-01 0.0601 0.0861 0.455 CD14_Mono LOneK1K
ENSG00000112299 VNN1 681228 sc-eQTL 3.71e-01 -0.0805 0.0898 0.455 CD14_Mono LOneK1K
ENSG00000112303 VNN2 631824 sc-eQTL 7.40e-01 -0.0198 0.0595 0.455 CD14_Mono LOneK1K
ENSG00000112306 RPS12 580714 sc-eQTL 7.39e-01 0.0136 0.0408 0.455 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -922829 sc-eQTL 5.63e-01 -0.0322 0.0555 0.455 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 581944 sc-eQTL 6.21e-01 0.0359 0.0725 0.455 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -901018 sc-eQTL 8.50e-01 -0.0145 0.0761 0.455 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -556887 sc-eQTL 8.57e-01 0.0177 0.0984 0.455 CD16_Mono LOneK1K
ENSG00000079950 STX7 882085 sc-eQTL 6.81e-01 0.0267 0.0649 0.455 CD16_Mono LOneK1K
ENSG00000093134 VNN3 660518 sc-eQTL 9.07e-01 -0.0111 0.0955 0.455 CD16_Mono LOneK1K
ENSG00000112299 VNN1 681228 sc-eQTL 9.28e-01 0.00856 0.0946 0.455 CD16_Mono LOneK1K
ENSG00000112303 VNN2 631824 sc-eQTL 1.22e-01 -0.138 0.0887 0.455 CD16_Mono LOneK1K
ENSG00000112306 RPS12 580714 sc-eQTL 4.07e-01 0.0314 0.0378 0.455 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -922829 sc-eQTL 5.01e-01 -0.0386 0.0572 0.455 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 581944 sc-eQTL 8.17e-01 0.0212 0.0919 0.455 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -901018 sc-eQTL 9.61e-01 0.00404 0.0831 0.455 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -556887 sc-eQTL 5.28e-01 -0.0492 0.0778 0.455 NK_CD56dim LOneK1K
ENSG00000079950 STX7 882085 sc-eQTL 3.18e-01 -0.073 0.073 0.455 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 631824 sc-eQTL 6.56e-01 -0.0413 0.0925 0.455 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 580714 sc-eQTL 5.36e-02 0.0727 0.0374 0.455 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -922829 sc-eQTL 1.60e-02 0.187 0.077 0.455 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000112299 VNN1 681228 pQTL 0.000994 -0.116 0.0351 0.0 0.0 0.443

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina