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Genes within 1Mb (chr6:133388321:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -563849 sc-eQTL 4.05e-01 -0.0753 0.0903 0.404 B L1
ENSG00000079931 MOXD1 986846 sc-eQTL 4.40e-01 0.0738 0.0954 0.404 B L1
ENSG00000079950 STX7 875123 sc-eQTL 6.26e-01 -0.0176 0.036 0.404 B L1
ENSG00000112303 VNN2 624862 sc-eQTL 1.68e-01 -0.0932 0.0674 0.404 B L1
ENSG00000112306 RPS12 573752 sc-eQTL 7.23e-01 0.0145 0.0409 0.404 B L1
ENSG00000118515 SGK1 -929791 sc-eQTL 2.72e-01 0.0693 0.063 0.404 B L1
ENSG00000146409 SLC18B1 574982 sc-eQTL 6.31e-01 0.0414 0.0861 0.404 B L1
ENSG00000028839 TBPL1 -563849 sc-eQTL 1.66e-01 -0.0934 0.0672 0.404 CD4T L1
ENSG00000079950 STX7 875123 sc-eQTL 3.54e-01 -0.065 0.07 0.404 CD4T L1
ENSG00000112303 VNN2 624862 sc-eQTL 2.20e-01 -0.0745 0.0606 0.404 CD4T L1
ENSG00000112306 RPS12 573752 sc-eQTL 4.72e-01 0.0297 0.0413 0.404 CD4T L1
ENSG00000118515 SGK1 -929791 sc-eQTL 4.88e-01 0.0386 0.0555 0.404 CD4T L1
ENSG00000146409 SLC18B1 574982 sc-eQTL 8.15e-01 0.0196 0.0836 0.404 CD4T L1
ENSG00000028839 TBPL1 -563849 sc-eQTL 2.44e-01 -0.0778 0.0666 0.404 CD8T L1
ENSG00000079950 STX7 875123 sc-eQTL 1.53e-01 -0.0996 0.0695 0.404 CD8T L1
ENSG00000112303 VNN2 624862 sc-eQTL 3.65e-02 -0.17 0.0806 0.404 CD8T L1
ENSG00000112306 RPS12 573752 sc-eQTL 5.45e-01 0.0169 0.0278 0.404 CD8T L1
ENSG00000118515 SGK1 -929791 sc-eQTL 8.01e-01 -0.0108 0.0429 0.404 CD8T L1
ENSG00000146409 SLC18B1 574982 sc-eQTL 7.85e-01 0.023 0.0842 0.404 CD8T L1
ENSG00000028839 TBPL1 -563849 sc-eQTL 5.30e-01 -0.0638 0.101 0.399 DC L1
ENSG00000079950 STX7 875123 sc-eQTL 6.83e-02 -0.114 0.0625 0.399 DC L1
ENSG00000093134 VNN3 653556 sc-eQTL 7.51e-01 -0.0248 0.0781 0.399 DC L1
ENSG00000112299 VNN1 674266 sc-eQTL 9.92e-01 -0.000857 0.0843 0.399 DC L1
ENSG00000112303 VNN2 624862 sc-eQTL 5.63e-01 -0.0523 0.0901 0.399 DC L1
ENSG00000112306 RPS12 573752 sc-eQTL 2.05e-01 0.0641 0.0504 0.399 DC L1
ENSG00000118515 SGK1 -929791 sc-eQTL 7.06e-01 -0.0222 0.0587 0.399 DC L1
ENSG00000146409 SLC18B1 574982 sc-eQTL 3.04e-01 0.0823 0.0798 0.399 DC L1
ENSG00000286438 AL591115.1 285193 sc-eQTL 3.06e-01 -0.0746 0.0727 0.399 DC L1
ENSG00000286887 AL355881.1 -907980 sc-eQTL 6.34e-01 -0.0433 0.0907 0.399 DC L1
ENSG00000028839 TBPL1 -563849 sc-eQTL 6.92e-01 0.028 0.0706 0.404 Mono L1
ENSG00000079950 STX7 875123 sc-eQTL 7.29e-01 -0.0164 0.0472 0.404 Mono L1
ENSG00000093134 VNN3 653556 sc-eQTL 7.51e-01 0.0258 0.0811 0.404 Mono L1
ENSG00000112299 VNN1 674266 sc-eQTL 1.87e-01 -0.115 0.0869 0.404 Mono L1
ENSG00000112303 VNN2 624862 sc-eQTL 4.65e-01 -0.045 0.0615 0.404 Mono L1
ENSG00000112306 RPS12 573752 sc-eQTL 9.99e-01 6.16e-05 0.0369 0.404 Mono L1
ENSG00000118515 SGK1 -929791 sc-eQTL 8.45e-02 -0.0897 0.0517 0.404 Mono L1
ENSG00000146409 SLC18B1 574982 sc-eQTL 7.26e-01 0.0256 0.073 0.404 Mono L1
ENSG00000286887 AL355881.1 -907980 sc-eQTL 4.26e-01 -0.0571 0.0716 0.404 Mono L1
ENSG00000028839 TBPL1 -563849 sc-eQTL 9.51e-01 -0.00481 0.0785 0.403 NK L1
ENSG00000079950 STX7 875123 sc-eQTL 4.51e-02 -0.145 0.0719 0.403 NK L1
ENSG00000112303 VNN2 624862 sc-eQTL 3.69e-01 -0.0812 0.0902 0.403 NK L1
ENSG00000112306 RPS12 573752 sc-eQTL 5.64e-02 0.0711 0.0371 0.403 NK L1
ENSG00000118515 SGK1 -929791 sc-eQTL 6.46e-02 0.127 0.0686 0.403 NK L1
ENSG00000028839 TBPL1 -563849 sc-eQTL 6.15e-02 0.168 0.0896 0.404 Other_T L1
ENSG00000079950 STX7 875123 sc-eQTL 2.10e-01 -0.089 0.0708 0.404 Other_T L1
ENSG00000112303 VNN2 624862 sc-eQTL 2.15e-01 -0.107 0.0857 0.404 Other_T L1
ENSG00000112306 RPS12 573752 sc-eQTL 3.69e-01 0.0306 0.034 0.404 Other_T L1
ENSG00000118515 SGK1 -929791 sc-eQTL 5.17e-01 0.0407 0.0627 0.404 Other_T L1
ENSG00000146409 SLC18B1 574982 sc-eQTL 4.84e-01 -0.0654 0.0932 0.404 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -563849 sc-eQTL 9.66e-01 -0.0045 0.106 0.413 B_Activated L2
ENSG00000079931 MOXD1 986846 sc-eQTL 5.76e-01 0.0541 0.0965 0.413 B_Activated L2
ENSG00000079950 STX7 875123 sc-eQTL 4.69e-01 0.0656 0.0904 0.413 B_Activated L2
ENSG00000112303 VNN2 624862 sc-eQTL 6.67e-01 -0.0415 0.0963 0.413 B_Activated L2
ENSG00000112306 RPS12 573752 sc-eQTL 5.16e-01 -0.0336 0.0516 0.413 B_Activated L2
ENSG00000118515 SGK1 -929791 sc-eQTL 9.31e-01 0.00795 0.0921 0.413 B_Activated L2
ENSG00000146409 SLC18B1 574982 sc-eQTL 5.41e-01 -0.0553 0.0903 0.413 B_Activated L2
ENSG00000028839 TBPL1 -563849 sc-eQTL 3.59e-01 -0.0929 0.101 0.406 B_Intermediate L2
ENSG00000079931 MOXD1 986846 sc-eQTL 9.52e-02 -0.148 0.0882 0.406 B_Intermediate L2
ENSG00000079950 STX7 875123 sc-eQTL 6.61e-02 -0.107 0.0576 0.406 B_Intermediate L2
ENSG00000112303 VNN2 624862 sc-eQTL 2.17e-01 -0.108 0.0872 0.406 B_Intermediate L2
ENSG00000112306 RPS12 573752 sc-eQTL 6.25e-01 0.0262 0.0536 0.406 B_Intermediate L2
ENSG00000118515 SGK1 -929791 sc-eQTL 3.26e-01 -0.0909 0.0924 0.406 B_Intermediate L2
ENSG00000146409 SLC18B1 574982 sc-eQTL 1.86e-01 0.128 0.0961 0.406 B_Intermediate L2
ENSG00000028839 TBPL1 -563849 sc-eQTL 7.98e-01 -0.0246 0.0958 0.401 B_Memory L2
ENSG00000079931 MOXD1 986846 sc-eQTL 3.79e-02 0.183 0.0875 0.401 B_Memory L2
ENSG00000079950 STX7 875123 sc-eQTL 3.05e-01 -0.0711 0.0692 0.401 B_Memory L2
ENSG00000112303 VNN2 624862 sc-eQTL 7.64e-01 -0.0272 0.0907 0.401 B_Memory L2
ENSG00000112306 RPS12 573752 sc-eQTL 9.60e-01 -0.00221 0.0437 0.401 B_Memory L2
ENSG00000118515 SGK1 -929791 sc-eQTL 5.89e-01 -0.0434 0.0801 0.401 B_Memory L2
ENSG00000146409 SLC18B1 574982 sc-eQTL 1.44e-01 -0.133 0.0907 0.401 B_Memory L2
ENSG00000028839 TBPL1 -563849 sc-eQTL 5.50e-01 -0.0557 0.0931 0.404 B_Naive1 L2
ENSG00000079931 MOXD1 986846 sc-eQTL 5.43e-01 0.0624 0.102 0.404 B_Naive1 L2
ENSG00000079950 STX7 875123 sc-eQTL 8.07e-01 -0.011 0.0448 0.404 B_Naive1 L2
ENSG00000112303 VNN2 624862 sc-eQTL 5.58e-01 0.051 0.0869 0.404 B_Naive1 L2
ENSG00000112306 RPS12 573752 sc-eQTL 4.57e-01 0.0369 0.0495 0.404 B_Naive1 L2
ENSG00000118515 SGK1 -929791 sc-eQTL 2.54e-01 0.0883 0.0772 0.404 B_Naive1 L2
ENSG00000146409 SLC18B1 574982 sc-eQTL 5.54e-01 0.0566 0.0955 0.404 B_Naive1 L2
ENSG00000028839 TBPL1 -563849 sc-eQTL 4.05e-01 -0.0821 0.0984 0.401 B_Naive2 L2
ENSG00000079931 MOXD1 986846 sc-eQTL 5.82e-01 0.053 0.096 0.401 B_Naive2 L2
ENSG00000079950 STX7 875123 sc-eQTL 7.29e-01 -0.0182 0.0523 0.401 B_Naive2 L2
ENSG00000112303 VNN2 624862 sc-eQTL 2.70e-01 -0.106 0.0958 0.401 B_Naive2 L2
ENSG00000112306 RPS12 573752 sc-eQTL 9.62e-01 -0.00245 0.0509 0.401 B_Naive2 L2
ENSG00000118515 SGK1 -929791 sc-eQTL 6.78e-01 0.0374 0.0899 0.401 B_Naive2 L2
ENSG00000146409 SLC18B1 574982 sc-eQTL 7.57e-01 0.0301 0.0971 0.401 B_Naive2 L2
ENSG00000028839 TBPL1 -563849 sc-eQTL 7.99e-01 0.0244 0.0957 0.405 CD4_CTL L2
ENSG00000079950 STX7 875123 sc-eQTL 4.53e-01 0.0714 0.0949 0.405 CD4_CTL L2
ENSG00000112303 VNN2 624862 sc-eQTL 1.07e-02 -0.243 0.0943 0.405 CD4_CTL L2
ENSG00000112306 RPS12 573752 sc-eQTL 6.04e-01 0.023 0.0443 0.405 CD4_CTL L2
ENSG00000118515 SGK1 -929791 sc-eQTL 4.16e-01 -0.0626 0.0767 0.405 CD4_CTL L2
ENSG00000146409 SLC18B1 574982 sc-eQTL 7.87e-01 -0.0241 0.0893 0.405 CD4_CTL L2
ENSG00000028839 TBPL1 -563849 sc-eQTL 5.87e-01 -0.042 0.0772 0.404 CD4_Naive L2
ENSG00000079950 STX7 875123 sc-eQTL 7.34e-01 0.0258 0.0757 0.404 CD4_Naive L2
ENSG00000112303 VNN2 624862 sc-eQTL 5.24e-01 -0.0448 0.0701 0.404 CD4_Naive L2
ENSG00000112306 RPS12 573752 sc-eQTL 4.58e-01 0.0338 0.0455 0.404 CD4_Naive L2
ENSG00000118515 SGK1 -929791 sc-eQTL 4.77e-01 0.0397 0.0557 0.404 CD4_Naive L2
ENSG00000146409 SLC18B1 574982 sc-eQTL 8.03e-01 0.0219 0.0876 0.404 CD4_Naive L2
ENSG00000028839 TBPL1 -563849 sc-eQTL 1.93e-01 -0.107 0.0822 0.404 CD4_TCM L2
ENSG00000079950 STX7 875123 sc-eQTL 4.38e-02 -0.167 0.0823 0.404 CD4_TCM L2
ENSG00000112303 VNN2 624862 sc-eQTL 6.36e-01 -0.0388 0.0819 0.404 CD4_TCM L2
ENSG00000112306 RPS12 573752 sc-eQTL 4.20e-01 0.0343 0.0424 0.404 CD4_TCM L2
ENSG00000118515 SGK1 -929791 sc-eQTL 8.29e-01 0.0128 0.0594 0.404 CD4_TCM L2
ENSG00000146409 SLC18B1 574982 sc-eQTL 3.10e-01 -0.0998 0.0981 0.404 CD4_TCM L2
ENSG00000028839 TBPL1 -563849 sc-eQTL 3.08e-01 -0.0979 0.0958 0.404 CD4_TEM L2
ENSG00000079950 STX7 875123 sc-eQTL 4.24e-01 -0.0769 0.096 0.404 CD4_TEM L2
ENSG00000112303 VNN2 624862 sc-eQTL 1.33e-01 -0.139 0.0918 0.404 CD4_TEM L2
ENSG00000112306 RPS12 573752 sc-eQTL 5.65e-01 0.0218 0.0378 0.404 CD4_TEM L2
ENSG00000118515 SGK1 -929791 sc-eQTL 5.20e-01 0.0418 0.065 0.404 CD4_TEM L2
ENSG00000146409 SLC18B1 574982 sc-eQTL 3.18e-01 -0.0939 0.0938 0.404 CD4_TEM L2
ENSG00000028839 TBPL1 -563849 sc-eQTL 9.77e-01 0.00244 0.084 0.404 CD8_CTL L2
ENSG00000079950 STX7 875123 sc-eQTL 3.83e-01 -0.0684 0.0783 0.404 CD8_CTL L2
ENSG00000112303 VNN2 624862 sc-eQTL 8.33e-02 -0.154 0.0885 0.404 CD8_CTL L2
ENSG00000112306 RPS12 573752 sc-eQTL 8.28e-01 0.0104 0.0477 0.404 CD8_CTL L2
ENSG00000118515 SGK1 -929791 sc-eQTL 6.94e-01 -0.0317 0.0806 0.404 CD8_CTL L2
ENSG00000146409 SLC18B1 574982 sc-eQTL 7.73e-01 -0.0267 0.0925 0.404 CD8_CTL L2
ENSG00000028839 TBPL1 -563849 sc-eQTL 2.80e-01 -0.0979 0.0904 0.404 CD8_Naive L2
ENSG00000079950 STX7 875123 sc-eQTL 7.74e-02 -0.17 0.0958 0.404 CD8_Naive L2
ENSG00000112303 VNN2 624862 sc-eQTL 2.74e-01 -0.0912 0.0831 0.404 CD8_Naive L2
ENSG00000112306 RPS12 573752 sc-eQTL 1.19e-01 0.0743 0.0474 0.404 CD8_Naive L2
ENSG00000118515 SGK1 -929791 sc-eQTL 9.23e-01 0.0058 0.0599 0.404 CD8_Naive L2
ENSG00000146409 SLC18B1 574982 sc-eQTL 2.69e-01 0.106 0.0954 0.404 CD8_Naive L2
ENSG00000028839 TBPL1 -563849 sc-eQTL 9.75e-01 -0.00326 0.103 0.407 CD8_TCM L2
ENSG00000079950 STX7 875123 sc-eQTL 2.77e-01 -0.103 0.0949 0.407 CD8_TCM L2
ENSG00000112303 VNN2 624862 sc-eQTL 8.13e-01 0.0224 0.0945 0.407 CD8_TCM L2
ENSG00000112306 RPS12 573752 sc-eQTL 4.90e-01 0.0318 0.046 0.407 CD8_TCM L2
ENSG00000118515 SGK1 -929791 sc-eQTL 8.63e-01 -0.0132 0.0763 0.407 CD8_TCM L2
ENSG00000146409 SLC18B1 574982 sc-eQTL 8.33e-01 0.0213 0.101 0.407 CD8_TCM L2
ENSG00000028839 TBPL1 -563849 sc-eQTL 3.91e-01 -0.079 0.0919 0.402 CD8_TEM L2
ENSG00000079950 STX7 875123 sc-eQTL 6.38e-01 0.0474 0.1 0.402 CD8_TEM L2
ENSG00000112303 VNN2 624862 sc-eQTL 1.02e-01 -0.163 0.0993 0.402 CD8_TEM L2
ENSG00000112306 RPS12 573752 sc-eQTL 5.72e-01 -0.0304 0.0537 0.402 CD8_TEM L2
ENSG00000118515 SGK1 -929791 sc-eQTL 6.03e-02 -0.165 0.0873 0.402 CD8_TEM L2
ENSG00000146409 SLC18B1 574982 sc-eQTL 3.47e-01 -0.0956 0.101 0.402 CD8_TEM L2
ENSG00000028839 TBPL1 -563849 sc-eQTL 7.09e-02 0.17 0.0939 0.403 MAIT L2
ENSG00000079950 STX7 875123 sc-eQTL 6.10e-01 -0.0459 0.0899 0.403 MAIT L2
ENSG00000112303 VNN2 624862 sc-eQTL 6.38e-01 -0.0431 0.0914 0.403 MAIT L2
ENSG00000112306 RPS12 573752 sc-eQTL 5.06e-01 0.03 0.0449 0.403 MAIT L2
ENSG00000118515 SGK1 -929791 sc-eQTL 4.54e-01 0.0474 0.0632 0.403 MAIT L2
ENSG00000146409 SLC18B1 574982 sc-eQTL 4.66e-01 -0.0688 0.0942 0.403 MAIT L2
ENSG00000028839 TBPL1 -563849 sc-eQTL 4.53e-01 0.0772 0.103 0.402 NK_CD56bright L2
ENSG00000079950 STX7 875123 sc-eQTL 2.15e-01 -0.118 0.095 0.402 NK_CD56bright L2
ENSG00000112303 VNN2 624862 sc-eQTL 7.75e-01 0.0277 0.0968 0.402 NK_CD56bright L2
ENSG00000112306 RPS12 573752 sc-eQTL 5.31e-01 -0.0338 0.0539 0.402 NK_CD56bright L2
ENSG00000118515 SGK1 -929791 sc-eQTL 1.93e-01 0.105 0.0803 0.402 NK_CD56bright L2
ENSG00000028839 TBPL1 -563849 sc-eQTL 3.07e-01 0.0859 0.0839 0.401 NK_CD56dim L2
ENSG00000079950 STX7 875123 sc-eQTL 2.78e-01 -0.0834 0.0768 0.401 NK_CD56dim L2
ENSG00000112303 VNN2 624862 sc-eQTL 8.74e-01 0.0153 0.0963 0.401 NK_CD56dim L2
ENSG00000112306 RPS12 573752 sc-eQTL 2.62e-02 0.0845 0.0378 0.401 NK_CD56dim L2
ENSG00000118515 SGK1 -929791 sc-eQTL 8.07e-01 0.0207 0.0846 0.401 NK_CD56dim L2
ENSG00000028839 TBPL1 -563849 sc-eQTL 6.28e-01 -0.0511 0.105 0.402 NK_HLA L2
ENSG00000079950 STX7 875123 sc-eQTL 2.81e-01 -0.103 0.0957 0.402 NK_HLA L2
ENSG00000112303 VNN2 624862 sc-eQTL 5.33e-01 -0.0605 0.097 0.402 NK_HLA L2
ENSG00000112306 RPS12 573752 sc-eQTL 5.88e-01 0.0246 0.0452 0.402 NK_HLA L2
ENSG00000118515 SGK1 -929791 sc-eQTL 3.51e-01 -0.0834 0.0892 0.402 NK_HLA L2
ENSG00000028839 TBPL1 -563849 sc-eQTL 4.82e-01 -0.0615 0.0873 0.401 NK_cytokine L2
ENSG00000079950 STX7 875123 sc-eQTL 1.69e-01 -0.116 0.0842 0.401 NK_cytokine L2
ENSG00000112303 VNN2 624862 sc-eQTL 6.86e-02 -0.173 0.0944 0.401 NK_cytokine L2
ENSG00000112306 RPS12 573752 sc-eQTL 3.60e-01 0.0473 0.0515 0.401 NK_cytokine L2
ENSG00000118515 SGK1 -929791 sc-eQTL 1.35e-03 0.272 0.0838 0.401 NK_cytokine L2
ENSG00000028839 TBPL1 -563849 sc-eQTL 6.95e-01 0.0474 0.12 0.411 PB L2
ENSG00000079931 MOXD1 986846 sc-eQTL 6.88e-01 0.0413 0.103 0.411 PB L2
ENSG00000079950 STX7 875123 sc-eQTL 7.49e-01 -0.0275 0.0857 0.411 PB L2
ENSG00000112303 VNN2 624862 sc-eQTL 2.94e-01 -0.11 0.104 0.411 PB L2
ENSG00000112306 RPS12 573752 sc-eQTL 2.26e-01 0.072 0.0591 0.411 PB L2
ENSG00000118515 SGK1 -929791 sc-eQTL 6.06e-01 0.0497 0.096 0.411 PB L2
ENSG00000146409 SLC18B1 574982 sc-eQTL 9.65e-02 -0.185 0.11 0.411 PB L2
ENSG00000028839 TBPL1 -563849 sc-eQTL 4.76e-01 0.0705 0.0989 0.404 Pro_T L2
ENSG00000079950 STX7 875123 sc-eQTL 7.48e-01 -0.0284 0.0884 0.404 Pro_T L2
ENSG00000112303 VNN2 624862 sc-eQTL 6.25e-01 0.0463 0.0948 0.404 Pro_T L2
ENSG00000112306 RPS12 573752 sc-eQTL 3.52e-01 0.0334 0.0358 0.404 Pro_T L2
ENSG00000118515 SGK1 -929791 sc-eQTL 2.71e-01 -0.0791 0.0717 0.404 Pro_T L2
ENSG00000146409 SLC18B1 574982 sc-eQTL 7.45e-02 -0.165 0.0921 0.404 Pro_T L2
ENSG00000028839 TBPL1 -563849 sc-eQTL 5.22e-02 -0.189 0.0969 0.404 Treg L2
ENSG00000079950 STX7 875123 sc-eQTL 6.55e-01 0.0412 0.0921 0.404 Treg L2
ENSG00000112303 VNN2 624862 sc-eQTL 9.38e-01 -0.00601 0.0775 0.404 Treg L2
ENSG00000112306 RPS12 573752 sc-eQTL 4.71e-01 -0.0247 0.0343 0.404 Treg L2
ENSG00000118515 SGK1 -929791 sc-eQTL 2.60e-01 -0.0813 0.072 0.404 Treg L2
ENSG00000146409 SLC18B1 574982 sc-eQTL 1.00e-01 0.159 0.0963 0.404 Treg L2
ENSG00000028839 TBPL1 -563849 sc-eQTL 8.94e-01 -0.0139 0.105 0.4 cDC L2
ENSG00000079950 STX7 875123 sc-eQTL 9.24e-01 -0.0079 0.0823 0.4 cDC L2
ENSG00000093134 VNN3 653556 sc-eQTL 1.27e-01 -0.125 0.0812 0.4 cDC L2
ENSG00000112299 VNN1 674266 sc-eQTL 5.55e-01 -0.0567 0.096 0.4 cDC L2
ENSG00000112303 VNN2 624862 sc-eQTL 4.79e-02 -0.184 0.0926 0.4 cDC L2
ENSG00000112306 RPS12 573752 sc-eQTL 2.64e-01 0.0516 0.0461 0.4 cDC L2
ENSG00000118515 SGK1 -929791 sc-eQTL 4.06e-01 -0.0647 0.0777 0.4 cDC L2
ENSG00000146409 SLC18B1 574982 sc-eQTL 8.29e-01 -0.0198 0.0915 0.4 cDC L2
ENSG00000286438 AL591115.1 285193 sc-eQTL 4.58e-01 -0.0544 0.0731 0.4 cDC L2
ENSG00000286887 AL355881.1 -907980 sc-eQTL 7.75e-01 0.0257 0.09 0.4 cDC L2
ENSG00000028839 TBPL1 -563849 sc-eQTL 7.92e-01 0.021 0.0797 0.404 cMono_IL1B L2
ENSG00000079950 STX7 875123 sc-eQTL 6.62e-01 -0.0265 0.0605 0.404 cMono_IL1B L2
ENSG00000093134 VNN3 653556 sc-eQTL 4.62e-01 0.0628 0.0854 0.404 cMono_IL1B L2
ENSG00000112299 VNN1 674266 sc-eQTL 2.33e-01 -0.103 0.0859 0.404 cMono_IL1B L2
ENSG00000112303 VNN2 624862 sc-eQTL 5.72e-01 -0.039 0.0689 0.404 cMono_IL1B L2
ENSG00000112306 RPS12 573752 sc-eQTL 8.09e-01 0.00928 0.0383 0.404 cMono_IL1B L2
ENSG00000118515 SGK1 -929791 sc-eQTL 2.38e-01 -0.0674 0.0569 0.404 cMono_IL1B L2
ENSG00000146409 SLC18B1 574982 sc-eQTL 3.37e-01 0.071 0.0737 0.404 cMono_IL1B L2
ENSG00000286887 AL355881.1 -907980 sc-eQTL 6.67e-01 -0.0331 0.0769 0.404 cMono_IL1B L2
ENSG00000028839 TBPL1 -563849 sc-eQTL 4.31e-01 0.0712 0.0902 0.404 cMono_S100A L2
ENSG00000079950 STX7 875123 sc-eQTL 1.87e-01 -0.0861 0.065 0.404 cMono_S100A L2
ENSG00000093134 VNN3 653556 sc-eQTL 9.74e-01 -0.00269 0.0815 0.404 cMono_S100A L2
ENSG00000112299 VNN1 674266 sc-eQTL 3.02e-01 -0.0912 0.0882 0.404 cMono_S100A L2
ENSG00000112303 VNN2 624862 sc-eQTL 8.19e-01 -0.0133 0.0579 0.404 cMono_S100A L2
ENSG00000112306 RPS12 573752 sc-eQTL 3.22e-01 0.0413 0.0416 0.404 cMono_S100A L2
ENSG00000118515 SGK1 -929791 sc-eQTL 4.83e-01 -0.0335 0.0477 0.404 cMono_S100A L2
ENSG00000146409 SLC18B1 574982 sc-eQTL 7.46e-01 0.0251 0.0772 0.404 cMono_S100A L2
ENSG00000286887 AL355881.1 -907980 sc-eQTL 8.42e-01 -0.0151 0.0755 0.404 cMono_S100A L2
ENSG00000028839 TBPL1 -563849 sc-eQTL 5.18e-01 0.083 0.128 0.409 gdT L2
ENSG00000079950 STX7 875123 sc-eQTL 1.48e-02 -0.267 0.108 0.409 gdT L2
ENSG00000112303 VNN2 624862 sc-eQTL 9.34e-01 -0.0101 0.122 0.409 gdT L2
ENSG00000112306 RPS12 573752 sc-eQTL 3.99e-02 0.095 0.0458 0.409 gdT L2
ENSG00000118515 SGK1 -929791 sc-eQTL 9.83e-02 -0.145 0.0869 0.409 gdT L2
ENSG00000146409 SLC18B1 574982 sc-eQTL 7.51e-01 0.0382 0.12 0.409 gdT L2
ENSG00000028839 TBPL1 -563849 sc-eQTL 4.54e-01 0.0696 0.0926 0.407 intMono L2
ENSG00000079950 STX7 875123 sc-eQTL 3.35e-01 -0.0855 0.0884 0.407 intMono L2
ENSG00000093134 VNN3 653556 sc-eQTL 6.50e-01 -0.0406 0.0894 0.407 intMono L2
ENSG00000112299 VNN1 674266 sc-eQTL 2.36e-01 -0.105 0.0881 0.407 intMono L2
ENSG00000112303 VNN2 624862 sc-eQTL 1.71e-01 -0.123 0.0895 0.407 intMono L2
ENSG00000112306 RPS12 573752 sc-eQTL 2.62e-01 0.0439 0.039 0.407 intMono L2
ENSG00000118515 SGK1 -929791 sc-eQTL 8.81e-01 -0.00986 0.0657 0.407 intMono L2
ENSG00000146409 SLC18B1 574982 sc-eQTL 8.45e-01 -0.0187 0.0952 0.407 intMono L2
ENSG00000286887 AL355881.1 -907980 sc-eQTL 3.04e-01 -0.0935 0.0908 0.407 intMono L2
ENSG00000028839 TBPL1 -563849 sc-eQTL 1.13e-01 -0.154 0.0971 0.41 ncMono L2
ENSG00000079950 STX7 875123 sc-eQTL 2.79e-01 0.0715 0.0659 0.41 ncMono L2
ENSG00000093134 VNN3 653556 sc-eQTL 6.71e-01 -0.0397 0.0932 0.41 ncMono L2
ENSG00000112299 VNN1 674266 sc-eQTL 9.78e-01 0.0025 0.0926 0.41 ncMono L2
ENSG00000112303 VNN2 624862 sc-eQTL 7.41e-02 -0.158 0.0883 0.41 ncMono L2
ENSG00000112306 RPS12 573752 sc-eQTL 9.50e-01 0.00283 0.0446 0.41 ncMono L2
ENSG00000118515 SGK1 -929791 sc-eQTL 9.22e-02 -0.106 0.0627 0.41 ncMono L2
ENSG00000146409 SLC18B1 574982 sc-eQTL 2.80e-01 -0.0852 0.0786 0.41 ncMono L2
ENSG00000286887 AL355881.1 -907980 sc-eQTL 3.44e-01 0.0789 0.0832 0.41 ncMono L2
ENSG00000028839 TBPL1 -563849 sc-eQTL 7.82e-01 0.0323 0.117 0.407 pDC L2
ENSG00000079950 STX7 875123 sc-eQTL 3.78e-02 -0.16 0.0765 0.407 pDC L2
ENSG00000093134 VNN3 653556 sc-eQTL 3.44e-01 0.074 0.0779 0.407 pDC L2
ENSG00000112299 VNN1 674266 sc-eQTL 8.34e-01 -0.0167 0.0795 0.407 pDC L2
ENSG00000112303 VNN2 624862 sc-eQTL 3.35e-02 0.2 0.0933 0.407 pDC L2
ENSG00000112306 RPS12 573752 sc-eQTL 2.24e-01 0.0791 0.0649 0.407 pDC L2
ENSG00000118515 SGK1 -929791 sc-eQTL 7.47e-01 0.0214 0.0662 0.407 pDC L2
ENSG00000146409 SLC18B1 574982 sc-eQTL 1.03e-01 0.157 0.0957 0.407 pDC L2
ENSG00000286438 AL591115.1 285193 sc-eQTL 4.16e-01 -0.0751 0.0921 0.407 pDC L2
ENSG00000286887 AL355881.1 -907980 sc-eQTL 9.49e-01 -0.00525 0.0819 0.407 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -563849 sc-eQTL 1.14e-01 -0.152 0.0956 0.404 B_Memory LOneK1K
ENSG00000079931 MOXD1 986846 sc-eQTL 9.65e-02 0.155 0.0928 0.404 B_Memory LOneK1K
ENSG00000079950 STX7 875123 sc-eQTL 5.64e-02 -0.101 0.0525 0.404 B_Memory LOneK1K
ENSG00000112303 VNN2 624862 sc-eQTL 5.45e-02 -0.161 0.083 0.404 B_Memory LOneK1K
ENSG00000112306 RPS12 573752 sc-eQTL 4.24e-01 0.0381 0.0477 0.404 B_Memory LOneK1K
ENSG00000118515 SGK1 -929791 sc-eQTL 5.11e-01 -0.0491 0.0745 0.404 B_Memory LOneK1K
ENSG00000146409 SLC18B1 574982 sc-eQTL 9.70e-01 0.00333 0.0876 0.404 B_Memory LOneK1K
ENSG00000028839 TBPL1 -563849 sc-eQTL 3.01e-01 -0.0963 0.0928 0.404 B_Naive LOneK1K
ENSG00000079931 MOXD1 986846 sc-eQTL 6.78e-01 0.0424 0.102 0.404 B_Naive LOneK1K
ENSG00000079950 STX7 875123 sc-eQTL 8.08e-01 -0.0102 0.0419 0.404 B_Naive LOneK1K
ENSG00000112303 VNN2 624862 sc-eQTL 7.57e-01 -0.0252 0.0814 0.404 B_Naive LOneK1K
ENSG00000112306 RPS12 573752 sc-eQTL 7.59e-01 0.0151 0.0492 0.404 B_Naive LOneK1K
ENSG00000118515 SGK1 -929791 sc-eQTL 2.44e-01 0.0887 0.076 0.404 B_Naive LOneK1K
ENSG00000146409 SLC18B1 574982 sc-eQTL 4.34e-01 0.0727 0.0927 0.404 B_Naive LOneK1K
ENSG00000028839 TBPL1 -563849 sc-eQTL 3.81e-01 0.0637 0.0727 0.404 CD14_Mono LOneK1K
ENSG00000079950 STX7 875123 sc-eQTL 3.72e-01 -0.0452 0.0505 0.404 CD14_Mono LOneK1K
ENSG00000093134 VNN3 653556 sc-eQTL 5.16e-01 0.0536 0.0824 0.404 CD14_Mono LOneK1K
ENSG00000112299 VNN1 674266 sc-eQTL 1.54e-01 -0.122 0.0856 0.404 CD14_Mono LOneK1K
ENSG00000112303 VNN2 624862 sc-eQTL 5.50e-01 -0.0341 0.0568 0.404 CD14_Mono LOneK1K
ENSG00000112306 RPS12 573752 sc-eQTL 6.87e-01 0.0157 0.039 0.404 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -929791 sc-eQTL 2.60e-01 -0.0599 0.053 0.404 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 574982 sc-eQTL 3.75e-01 0.0616 0.0693 0.404 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -907980 sc-eQTL 8.30e-01 -0.0156 0.0728 0.404 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -563849 sc-eQTL 6.11e-01 -0.0482 0.0947 0.403 CD16_Mono LOneK1K
ENSG00000079950 STX7 875123 sc-eQTL 7.42e-01 0.0206 0.0625 0.403 CD16_Mono LOneK1K
ENSG00000093134 VNN3 653556 sc-eQTL 7.47e-01 -0.0297 0.0919 0.403 CD16_Mono LOneK1K
ENSG00000112299 VNN1 674266 sc-eQTL 9.86e-01 -0.00159 0.0911 0.403 CD16_Mono LOneK1K
ENSG00000112303 VNN2 624862 sc-eQTL 4.69e-02 -0.17 0.0851 0.403 CD16_Mono LOneK1K
ENSG00000112306 RPS12 573752 sc-eQTL 6.05e-01 0.0189 0.0364 0.403 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -929791 sc-eQTL 2.26e-01 -0.0667 0.055 0.403 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 574982 sc-eQTL 9.10e-01 -0.00998 0.0885 0.403 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -907980 sc-eQTL 5.35e-01 -0.0497 0.0799 0.403 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -563849 sc-eQTL 9.65e-01 0.00344 0.0775 0.401 NK_CD56dim LOneK1K
ENSG00000079950 STX7 875123 sc-eQTL 5.09e-02 -0.142 0.0721 0.401 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 624862 sc-eQTL 2.74e-01 -0.101 0.0918 0.401 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 573752 sc-eQTL 4.01e-02 0.0769 0.0372 0.401 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -929791 sc-eQTL 4.32e-02 0.156 0.0769 0.401 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079950 STX7 875123 eQTL 0.0333 -0.0343 0.0161 0.0 0.0 0.403
ENSG00000112299 VNN1 674266 pQTL 4.25e-05 -0.146 0.0355 0.0 0.0 0.397

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079950 STX7 875123 2.91e-07 1.56e-07 7.16e-08 2.41e-07 9.87e-08 8.33e-08 2.24e-07 5.43e-08 1.54e-07 8.53e-08 1.59e-07 1.2e-07 2.38e-07 8.13e-08 5.62e-08 9.48e-08 4.12e-08 1.72e-07 7.27e-08 4.92e-08 1.22e-07 1.56e-07 1.64e-07 2.68e-08 2.09e-07 1.26e-07 1.22e-07 1.04e-07 1.26e-07 1.17e-07 1.26e-07 3.06e-08 3.59e-08 8.89e-08 3.02e-08 3.24e-08 5.7e-08 8.71e-08 6.5e-08 6.19e-08 5.41e-08 1.68e-07 5.22e-08 2.03e-08 3.29e-08 1.19e-08 9.29e-08 1.93e-09 4.61e-08