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Genes within 1Mb (chr6:133387466:G:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -564704 sc-eQTL 3.66e-01 -0.145 0.16 0.919 B L1
ENSG00000079931 MOXD1 985991 sc-eQTL 1.89e-01 0.222 0.169 0.919 B L1
ENSG00000079950 STX7 874268 sc-eQTL 3.74e-02 0.132 0.0632 0.919 B L1
ENSG00000112303 VNN2 624007 sc-eQTL 6.85e-02 -0.218 0.119 0.919 B L1
ENSG00000112306 RPS12 572897 sc-eQTL 1.54e-01 0.103 0.0722 0.919 B L1
ENSG00000118515 SGK1 -930646 sc-eQTL 4.24e-02 -0.226 0.111 0.919 B L1
ENSG00000146409 SLC18B1 574127 sc-eQTL 9.46e-01 -0.0103 0.153 0.919 B L1
ENSG00000028839 TBPL1 -564704 sc-eQTL 3.96e-01 -0.101 0.119 0.919 CD4T L1
ENSG00000079950 STX7 874268 sc-eQTL 4.01e-01 -0.104 0.123 0.919 CD4T L1
ENSG00000112303 VNN2 624007 sc-eQTL 7.66e-01 -0.0318 0.107 0.919 CD4T L1
ENSG00000112306 RPS12 572897 sc-eQTL 6.27e-01 0.0353 0.0727 0.919 CD4T L1
ENSG00000118515 SGK1 -930646 sc-eQTL 8.05e-01 -0.0242 0.0978 0.919 CD4T L1
ENSG00000146409 SLC18B1 574127 sc-eQTL 9.25e-02 -0.247 0.146 0.919 CD4T L1
ENSG00000028839 TBPL1 -564704 sc-eQTL 1.73e-02 -0.279 0.117 0.919 CD8T L1
ENSG00000079950 STX7 874268 sc-eQTL 1.24e-01 -0.19 0.123 0.919 CD8T L1
ENSG00000112303 VNN2 624007 sc-eQTL 2.41e-02 -0.323 0.142 0.919 CD8T L1
ENSG00000112306 RPS12 572897 sc-eQTL 5.83e-01 0.027 0.0492 0.919 CD8T L1
ENSG00000118515 SGK1 -930646 sc-eQTL 6.32e-01 -0.0363 0.0758 0.919 CD8T L1
ENSG00000146409 SLC18B1 574127 sc-eQTL 5.84e-01 -0.0815 0.149 0.919 CD8T L1
ENSG00000028839 TBPL1 -564704 sc-eQTL 8.21e-01 0.0403 0.177 0.917 DC L1
ENSG00000079950 STX7 874268 sc-eQTL 3.70e-01 -0.0987 0.11 0.917 DC L1
ENSG00000093134 VNN3 652701 sc-eQTL 3.87e-01 -0.118 0.136 0.917 DC L1
ENSG00000112299 VNN1 673411 sc-eQTL 4.62e-01 -0.108 0.147 0.917 DC L1
ENSG00000112303 VNN2 624007 sc-eQTL 2.17e-01 -0.195 0.157 0.917 DC L1
ENSG00000112306 RPS12 572897 sc-eQTL 3.37e-01 -0.085 0.0883 0.917 DC L1
ENSG00000118515 SGK1 -930646 sc-eQTL 6.46e-02 -0.189 0.102 0.917 DC L1
ENSG00000146409 SLC18B1 574127 sc-eQTL 3.90e-01 -0.12 0.14 0.917 DC L1
ENSG00000286438 AL591115.1 284338 sc-eQTL 1.92e-01 -0.166 0.127 0.917 DC L1
ENSG00000286887 AL355881.1 -908835 sc-eQTL 2.47e-01 -0.184 0.158 0.917 DC L1
ENSG00000028839 TBPL1 -564704 sc-eQTL 8.10e-01 -0.0301 0.125 0.919 Mono L1
ENSG00000079950 STX7 874268 sc-eQTL 2.80e-01 0.0901 0.0833 0.919 Mono L1
ENSG00000093134 VNN3 652701 sc-eQTL 8.58e-01 0.0256 0.143 0.919 Mono L1
ENSG00000112299 VNN1 673411 sc-eQTL 7.34e-01 0.0525 0.154 0.919 Mono L1
ENSG00000112303 VNN2 624007 sc-eQTL 1.44e-02 -0.265 0.107 0.919 Mono L1
ENSG00000112306 RPS12 572897 sc-eQTL 5.52e-01 -0.0388 0.0652 0.919 Mono L1
ENSG00000118515 SGK1 -930646 sc-eQTL 1.99e-01 -0.118 0.0917 0.919 Mono L1
ENSG00000146409 SLC18B1 574127 sc-eQTL 4.01e-01 -0.108 0.129 0.919 Mono L1
ENSG00000286887 AL355881.1 -908835 sc-eQTL 2.39e-02 -0.285 0.125 0.919 Mono L1
ENSG00000028839 TBPL1 -564704 sc-eQTL 3.17e-01 0.139 0.139 0.918 NK L1
ENSG00000079950 STX7 874268 sc-eQTL 9.34e-02 0.215 0.128 0.918 NK L1
ENSG00000112303 VNN2 624007 sc-eQTL 8.72e-01 -0.0257 0.16 0.918 NK L1
ENSG00000112306 RPS12 572897 sc-eQTL 6.37e-01 0.0313 0.0662 0.918 NK L1
ENSG00000118515 SGK1 -930646 sc-eQTL 9.49e-01 -0.00785 0.122 0.918 NK L1
ENSG00000028839 TBPL1 -564704 sc-eQTL 1.94e-01 0.209 0.161 0.919 Other_T L1
ENSG00000079950 STX7 874268 sc-eQTL 6.47e-01 -0.0583 0.127 0.919 Other_T L1
ENSG00000112303 VNN2 624007 sc-eQTL 1.16e-01 -0.241 0.153 0.919 Other_T L1
ENSG00000112306 RPS12 572897 sc-eQTL 9.91e-01 0.000669 0.0609 0.919 Other_T L1
ENSG00000118515 SGK1 -930646 sc-eQTL 9.60e-01 -0.00566 0.112 0.919 Other_T L1
ENSG00000146409 SLC18B1 574127 sc-eQTL 5.02e-02 -0.326 0.165 0.919 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -564704 sc-eQTL 3.66e-01 0.177 0.195 0.923 B_Activated L2
ENSG00000079931 MOXD1 985991 sc-eQTL 4.13e-01 0.146 0.178 0.923 B_Activated L2
ENSG00000079950 STX7 874268 sc-eQTL 4.00e-01 0.141 0.167 0.923 B_Activated L2
ENSG00000112303 VNN2 624007 sc-eQTL 9.41e-01 0.0133 0.178 0.923 B_Activated L2
ENSG00000112306 RPS12 572897 sc-eQTL 9.69e-01 -0.00366 0.0955 0.923 B_Activated L2
ENSG00000118515 SGK1 -930646 sc-eQTL 8.19e-01 0.0391 0.17 0.923 B_Activated L2
ENSG00000146409 SLC18B1 574127 sc-eQTL 7.09e-01 0.0626 0.167 0.923 B_Activated L2
ENSG00000028839 TBPL1 -564704 sc-eQTL 1.13e-01 0.282 0.177 0.918 B_Intermediate L2
ENSG00000079931 MOXD1 985991 sc-eQTL 5.02e-01 -0.105 0.157 0.918 B_Intermediate L2
ENSG00000079950 STX7 874268 sc-eQTL 3.36e-01 0.0987 0.102 0.918 B_Intermediate L2
ENSG00000112303 VNN2 624007 sc-eQTL 9.26e-01 0.0143 0.154 0.918 B_Intermediate L2
ENSG00000112306 RPS12 572897 sc-eQTL 1.44e-02 0.23 0.0932 0.918 B_Intermediate L2
ENSG00000118515 SGK1 -930646 sc-eQTL 1.36e-02 -0.401 0.161 0.918 B_Intermediate L2
ENSG00000146409 SLC18B1 574127 sc-eQTL 8.25e-01 0.0377 0.17 0.918 B_Intermediate L2
ENSG00000028839 TBPL1 -564704 sc-eQTL 6.57e-01 -0.0765 0.172 0.918 B_Memory L2
ENSG00000079931 MOXD1 985991 sc-eQTL 5.21e-01 -0.102 0.159 0.918 B_Memory L2
ENSG00000079950 STX7 874268 sc-eQTL 9.74e-05 0.477 0.12 0.918 B_Memory L2
ENSG00000112303 VNN2 624007 sc-eQTL 1.43e-01 -0.238 0.162 0.918 B_Memory L2
ENSG00000112306 RPS12 572897 sc-eQTL 9.28e-01 0.00709 0.0785 0.918 B_Memory L2
ENSG00000118515 SGK1 -930646 sc-eQTL 3.77e-01 -0.127 0.144 0.918 B_Memory L2
ENSG00000146409 SLC18B1 574127 sc-eQTL 5.47e-01 0.0987 0.164 0.918 B_Memory L2
ENSG00000028839 TBPL1 -564704 sc-eQTL 1.49e-01 -0.231 0.159 0.919 B_Naive1 L2
ENSG00000079931 MOXD1 985991 sc-eQTL 3.37e-01 0.169 0.175 0.919 B_Naive1 L2
ENSG00000079950 STX7 874268 sc-eQTL 3.83e-02 0.159 0.0761 0.919 B_Naive1 L2
ENSG00000112303 VNN2 624007 sc-eQTL 5.96e-02 -0.28 0.148 0.919 B_Naive1 L2
ENSG00000112306 RPS12 572897 sc-eQTL 7.25e-02 0.152 0.0843 0.919 B_Naive1 L2
ENSG00000118515 SGK1 -930646 sc-eQTL 8.02e-01 -0.0334 0.133 0.919 B_Naive1 L2
ENSG00000146409 SLC18B1 574127 sc-eQTL 8.86e-01 0.0234 0.164 0.919 B_Naive1 L2
ENSG00000028839 TBPL1 -564704 sc-eQTL 5.22e-02 -0.334 0.171 0.918 B_Naive2 L2
ENSG00000079931 MOXD1 985991 sc-eQTL 7.43e-01 0.0552 0.168 0.918 B_Naive2 L2
ENSG00000079950 STX7 874268 sc-eQTL 2.27e-01 0.11 0.0913 0.918 B_Naive2 L2
ENSG00000112303 VNN2 624007 sc-eQTL 9.10e-01 -0.019 0.168 0.918 B_Naive2 L2
ENSG00000112306 RPS12 572897 sc-eQTL 4.47e-02 0.178 0.0882 0.918 B_Naive2 L2
ENSG00000118515 SGK1 -930646 sc-eQTL 9.26e-01 0.0146 0.157 0.918 B_Naive2 L2
ENSG00000146409 SLC18B1 574127 sc-eQTL 1.32e-01 -0.255 0.169 0.918 B_Naive2 L2
ENSG00000028839 TBPL1 -564704 sc-eQTL 6.85e-01 -0.0675 0.166 0.916 CD4_CTL L2
ENSG00000079950 STX7 874268 sc-eQTL 8.01e-01 -0.0416 0.165 0.916 CD4_CTL L2
ENSG00000112303 VNN2 624007 sc-eQTL 6.07e-01 -0.0858 0.166 0.916 CD4_CTL L2
ENSG00000112306 RPS12 572897 sc-eQTL 6.67e-01 0.0331 0.0769 0.916 CD4_CTL L2
ENSG00000118515 SGK1 -930646 sc-eQTL 6.82e-01 -0.0546 0.133 0.916 CD4_CTL L2
ENSG00000146409 SLC18B1 574127 sc-eQTL 7.27e-01 -0.0542 0.155 0.916 CD4_CTL L2
ENSG00000028839 TBPL1 -564704 sc-eQTL 1.27e-01 -0.206 0.135 0.919 CD4_Naive L2
ENSG00000079950 STX7 874268 sc-eQTL 3.10e-01 -0.135 0.132 0.919 CD4_Naive L2
ENSG00000112303 VNN2 624007 sc-eQTL 4.92e-01 -0.0847 0.123 0.919 CD4_Naive L2
ENSG00000112306 RPS12 572897 sc-eQTL 8.85e-01 0.0116 0.0798 0.919 CD4_Naive L2
ENSG00000118515 SGK1 -930646 sc-eQTL 5.56e-01 -0.0576 0.0977 0.919 CD4_Naive L2
ENSG00000146409 SLC18B1 574127 sc-eQTL 3.54e-02 -0.322 0.152 0.919 CD4_Naive L2
ENSG00000028839 TBPL1 -564704 sc-eQTL 8.48e-01 -0.0279 0.146 0.919 CD4_TCM L2
ENSG00000079950 STX7 874268 sc-eQTL 8.20e-01 -0.0335 0.147 0.919 CD4_TCM L2
ENSG00000112303 VNN2 624007 sc-eQTL 9.84e-01 -0.00283 0.145 0.919 CD4_TCM L2
ENSG00000112306 RPS12 572897 sc-eQTL 3.24e-01 0.0739 0.0748 0.919 CD4_TCM L2
ENSG00000118515 SGK1 -930646 sc-eQTL 8.05e-01 -0.0259 0.105 0.919 CD4_TCM L2
ENSG00000146409 SLC18B1 574127 sc-eQTL 2.73e-01 -0.19 0.173 0.919 CD4_TCM L2
ENSG00000028839 TBPL1 -564704 sc-eQTL 2.87e-01 0.18 0.168 0.919 CD4_TEM L2
ENSG00000079950 STX7 874268 sc-eQTL 1.07e-01 -0.271 0.168 0.919 CD4_TEM L2
ENSG00000112303 VNN2 624007 sc-eQTL 3.99e-01 -0.137 0.162 0.919 CD4_TEM L2
ENSG00000112306 RPS12 572897 sc-eQTL 7.73e-01 0.0192 0.0665 0.919 CD4_TEM L2
ENSG00000118515 SGK1 -930646 sc-eQTL 6.72e-01 0.0483 0.114 0.919 CD4_TEM L2
ENSG00000146409 SLC18B1 574127 sc-eQTL 7.97e-01 0.0425 0.165 0.919 CD4_TEM L2
ENSG00000028839 TBPL1 -564704 sc-eQTL 7.84e-01 -0.0408 0.149 0.919 CD8_CTL L2
ENSG00000079950 STX7 874268 sc-eQTL 8.75e-01 -0.0219 0.139 0.919 CD8_CTL L2
ENSG00000112303 VNN2 624007 sc-eQTL 2.03e-01 -0.201 0.157 0.919 CD8_CTL L2
ENSG00000112306 RPS12 572897 sc-eQTL 9.71e-01 0.00309 0.0845 0.919 CD8_CTL L2
ENSG00000118515 SGK1 -930646 sc-eQTL 5.52e-01 0.0849 0.143 0.919 CD8_CTL L2
ENSG00000146409 SLC18B1 574127 sc-eQTL 1.85e-02 -0.384 0.162 0.919 CD8_CTL L2
ENSG00000028839 TBPL1 -564704 sc-eQTL 1.63e-02 -0.377 0.156 0.919 CD8_Naive L2
ENSG00000079950 STX7 874268 sc-eQTL 1.25e-01 -0.258 0.167 0.919 CD8_Naive L2
ENSG00000112303 VNN2 624007 sc-eQTL 7.63e-02 -0.257 0.144 0.919 CD8_Naive L2
ENSG00000112306 RPS12 572897 sc-eQTL 7.89e-02 0.146 0.0825 0.919 CD8_Naive L2
ENSG00000118515 SGK1 -930646 sc-eQTL 8.51e-01 -0.0196 0.104 0.919 CD8_Naive L2
ENSG00000146409 SLC18B1 574127 sc-eQTL 8.91e-01 -0.0229 0.167 0.919 CD8_Naive L2
ENSG00000028839 TBPL1 -564704 sc-eQTL 5.54e-02 -0.344 0.178 0.919 CD8_TCM L2
ENSG00000079950 STX7 874268 sc-eQTL 9.76e-01 0.00505 0.167 0.919 CD8_TCM L2
ENSG00000112303 VNN2 624007 sc-eQTL 7.23e-01 0.0587 0.165 0.919 CD8_TCM L2
ENSG00000112306 RPS12 572897 sc-eQTL 7.74e-01 0.0232 0.0806 0.919 CD8_TCM L2
ENSG00000118515 SGK1 -930646 sc-eQTL 7.30e-01 -0.0461 0.133 0.919 CD8_TCM L2
ENSG00000146409 SLC18B1 574127 sc-eQTL 7.98e-01 -0.0453 0.177 0.919 CD8_TCM L2
ENSG00000028839 TBPL1 -564704 sc-eQTL 6.00e-01 -0.0834 0.159 0.913 CD8_TEM L2
ENSG00000079950 STX7 874268 sc-eQTL 7.92e-01 -0.0459 0.174 0.913 CD8_TEM L2
ENSG00000112303 VNN2 624007 sc-eQTL 2.61e-01 -0.194 0.172 0.913 CD8_TEM L2
ENSG00000112306 RPS12 572897 sc-eQTL 8.03e-01 0.0231 0.0928 0.913 CD8_TEM L2
ENSG00000118515 SGK1 -930646 sc-eQTL 4.75e-01 -0.109 0.152 0.913 CD8_TEM L2
ENSG00000146409 SLC18B1 574127 sc-eQTL 8.02e-01 0.0442 0.176 0.913 CD8_TEM L2
ENSG00000028839 TBPL1 -564704 sc-eQTL 9.70e-01 -0.00626 0.167 0.918 MAIT L2
ENSG00000079950 STX7 874268 sc-eQTL 1.79e-01 -0.213 0.158 0.918 MAIT L2
ENSG00000112303 VNN2 624007 sc-eQTL 4.43e-01 -0.124 0.161 0.918 MAIT L2
ENSG00000112306 RPS12 572897 sc-eQTL 6.54e-01 0.0356 0.0792 0.918 MAIT L2
ENSG00000118515 SGK1 -930646 sc-eQTL 9.64e-01 -0.005 0.112 0.918 MAIT L2
ENSG00000146409 SLC18B1 574127 sc-eQTL 1.22e-02 -0.414 0.164 0.918 MAIT L2
ENSG00000028839 TBPL1 -564704 sc-eQTL 5.52e-01 0.106 0.178 0.918 NK_CD56bright L2
ENSG00000079950 STX7 874268 sc-eQTL 4.61e-01 -0.122 0.165 0.918 NK_CD56bright L2
ENSG00000112303 VNN2 624007 sc-eQTL 1.28e-01 -0.256 0.167 0.918 NK_CD56bright L2
ENSG00000112306 RPS12 572897 sc-eQTL 1.50e-01 -0.135 0.0932 0.918 NK_CD56bright L2
ENSG00000118515 SGK1 -930646 sc-eQTL 8.75e-01 0.0221 0.14 0.918 NK_CD56bright L2
ENSG00000028839 TBPL1 -564704 sc-eQTL 1.21e-01 0.233 0.149 0.918 NK_CD56dim L2
ENSG00000079950 STX7 874268 sc-eQTL 4.15e-01 0.112 0.137 0.918 NK_CD56dim L2
ENSG00000112303 VNN2 624007 sc-eQTL 2.65e-01 0.192 0.172 0.918 NK_CD56dim L2
ENSG00000112306 RPS12 572897 sc-eQTL 4.17e-01 0.0554 0.0682 0.918 NK_CD56dim L2
ENSG00000118515 SGK1 -930646 sc-eQTL 4.05e-01 -0.126 0.151 0.918 NK_CD56dim L2
ENSG00000028839 TBPL1 -564704 sc-eQTL 5.79e-01 0.104 0.188 0.92 NK_HLA L2
ENSG00000079950 STX7 874268 sc-eQTL 3.58e-01 0.157 0.171 0.92 NK_HLA L2
ENSG00000112303 VNN2 624007 sc-eQTL 4.87e-01 -0.12 0.173 0.92 NK_HLA L2
ENSG00000112306 RPS12 572897 sc-eQTL 5.64e-01 -0.0466 0.0805 0.92 NK_HLA L2
ENSG00000118515 SGK1 -930646 sc-eQTL 3.57e-01 -0.147 0.159 0.92 NK_HLA L2
ENSG00000028839 TBPL1 -564704 sc-eQTL 5.74e-01 0.0883 0.157 0.918 NK_cytokine L2
ENSG00000079950 STX7 874268 sc-eQTL 7.77e-02 0.267 0.151 0.918 NK_cytokine L2
ENSG00000112303 VNN2 624007 sc-eQTL 3.99e-01 -0.144 0.171 0.918 NK_cytokine L2
ENSG00000112306 RPS12 572897 sc-eQTL 8.57e-01 -0.0167 0.0927 0.918 NK_cytokine L2
ENSG00000118515 SGK1 -930646 sc-eQTL 7.08e-01 0.0578 0.154 0.918 NK_cytokine L2
ENSG00000028839 TBPL1 -564704 sc-eQTL 3.52e-01 -0.21 0.225 0.93 PB L2
ENSG00000079931 MOXD1 985991 sc-eQTL 9.36e-01 -0.0154 0.192 0.93 PB L2
ENSG00000079950 STX7 874268 sc-eQTL 8.47e-01 -0.0311 0.161 0.93 PB L2
ENSG00000112303 VNN2 624007 sc-eQTL 5.10e-01 -0.129 0.196 0.93 PB L2
ENSG00000112306 RPS12 572897 sc-eQTL 7.07e-01 0.042 0.111 0.93 PB L2
ENSG00000118515 SGK1 -930646 sc-eQTL 7.78e-01 -0.0508 0.18 0.93 PB L2
ENSG00000146409 SLC18B1 574127 sc-eQTL 1.33e-01 -0.313 0.207 0.93 PB L2
ENSG00000028839 TBPL1 -564704 sc-eQTL 3.62e-01 0.157 0.172 0.92 Pro_T L2
ENSG00000079950 STX7 874268 sc-eQTL 5.48e-01 0.0928 0.154 0.92 Pro_T L2
ENSG00000112303 VNN2 624007 sc-eQTL 9.38e-01 -0.0129 0.165 0.92 Pro_T L2
ENSG00000112306 RPS12 572897 sc-eQTL 3.54e-01 -0.0581 0.0625 0.92 Pro_T L2
ENSG00000118515 SGK1 -930646 sc-eQTL 5.90e-01 0.0677 0.125 0.92 Pro_T L2
ENSG00000146409 SLC18B1 574127 sc-eQTL 9.11e-01 0.0182 0.162 0.92 Pro_T L2
ENSG00000028839 TBPL1 -564704 sc-eQTL 5.14e-01 -0.112 0.171 0.919 Treg L2
ENSG00000079950 STX7 874268 sc-eQTL 2.99e-01 0.167 0.161 0.919 Treg L2
ENSG00000112303 VNN2 624007 sc-eQTL 3.17e-01 0.136 0.135 0.919 Treg L2
ENSG00000112306 RPS12 572897 sc-eQTL 8.57e-01 -0.0108 0.06 0.919 Treg L2
ENSG00000118515 SGK1 -930646 sc-eQTL 2.80e-01 0.137 0.126 0.919 Treg L2
ENSG00000146409 SLC18B1 574127 sc-eQTL 2.14e-01 -0.21 0.169 0.919 Treg L2
ENSG00000028839 TBPL1 -564704 sc-eQTL 2.23e-01 -0.215 0.176 0.912 cDC L2
ENSG00000079950 STX7 874268 sc-eQTL 9.13e-01 0.0153 0.139 0.912 cDC L2
ENSG00000093134 VNN3 652701 sc-eQTL 7.38e-01 -0.0462 0.138 0.912 cDC L2
ENSG00000112299 VNN1 673411 sc-eQTL 8.92e-01 0.022 0.162 0.912 cDC L2
ENSG00000112303 VNN2 624007 sc-eQTL 5.43e-02 -0.303 0.156 0.912 cDC L2
ENSG00000112306 RPS12 572897 sc-eQTL 5.55e-01 0.046 0.0779 0.912 cDC L2
ENSG00000118515 SGK1 -930646 sc-eQTL 1.70e-03 -0.407 0.128 0.912 cDC L2
ENSG00000146409 SLC18B1 574127 sc-eQTL 4.14e-01 -0.126 0.154 0.912 cDC L2
ENSG00000286438 AL591115.1 284338 sc-eQTL 7.21e-02 -0.221 0.122 0.912 cDC L2
ENSG00000286887 AL355881.1 -908835 sc-eQTL 3.16e-01 -0.152 0.151 0.912 cDC L2
ENSG00000028839 TBPL1 -564704 sc-eQTL 9.71e-01 0.00511 0.142 0.919 cMono_IL1B L2
ENSG00000079950 STX7 874268 sc-eQTL 7.47e-01 0.0347 0.108 0.919 cMono_IL1B L2
ENSG00000093134 VNN3 652701 sc-eQTL 9.06e-01 0.0181 0.152 0.919 cMono_IL1B L2
ENSG00000112299 VNN1 673411 sc-eQTL 9.51e-01 0.00947 0.154 0.919 cMono_IL1B L2
ENSG00000112303 VNN2 624007 sc-eQTL 8.69e-02 -0.21 0.122 0.919 cMono_IL1B L2
ENSG00000112306 RPS12 572897 sc-eQTL 6.66e-01 -0.0295 0.0682 0.919 cMono_IL1B L2
ENSG00000118515 SGK1 -930646 sc-eQTL 9.47e-02 -0.17 0.101 0.919 cMono_IL1B L2
ENSG00000146409 SLC18B1 574127 sc-eQTL 9.13e-01 0.0144 0.132 0.919 cMono_IL1B L2
ENSG00000286887 AL355881.1 -908835 sc-eQTL 8.02e-02 -0.239 0.136 0.919 cMono_IL1B L2
ENSG00000028839 TBPL1 -564704 sc-eQTL 9.17e-01 -0.0168 0.161 0.919 cMono_S100A L2
ENSG00000079950 STX7 874268 sc-eQTL 9.79e-02 0.192 0.116 0.919 cMono_S100A L2
ENSG00000093134 VNN3 652701 sc-eQTL 7.34e-01 0.0495 0.145 0.919 cMono_S100A L2
ENSG00000112299 VNN1 673411 sc-eQTL 4.86e-01 0.11 0.158 0.919 cMono_S100A L2
ENSG00000112303 VNN2 624007 sc-eQTL 5.95e-02 -0.194 0.102 0.919 cMono_S100A L2
ENSG00000112306 RPS12 572897 sc-eQTL 7.65e-01 0.0222 0.0744 0.919 cMono_S100A L2
ENSG00000118515 SGK1 -930646 sc-eQTL 6.11e-01 -0.0433 0.0851 0.919 cMono_S100A L2
ENSG00000146409 SLC18B1 574127 sc-eQTL 1.83e-01 -0.183 0.137 0.919 cMono_S100A L2
ENSG00000286887 AL355881.1 -908835 sc-eQTL 5.63e-02 -0.256 0.134 0.919 cMono_S100A L2
ENSG00000028839 TBPL1 -564704 sc-eQTL 8.15e-01 0.0521 0.223 0.921 gdT L2
ENSG00000079950 STX7 874268 sc-eQTL 9.52e-01 0.0115 0.192 0.921 gdT L2
ENSG00000112303 VNN2 624007 sc-eQTL 7.10e-02 -0.381 0.21 0.921 gdT L2
ENSG00000112306 RPS12 572897 sc-eQTL 9.32e-01 -0.0069 0.0808 0.921 gdT L2
ENSG00000118515 SGK1 -930646 sc-eQTL 8.04e-01 0.0379 0.152 0.921 gdT L2
ENSG00000146409 SLC18B1 574127 sc-eQTL 6.90e-01 -0.0835 0.209 0.921 gdT L2
ENSG00000028839 TBPL1 -564704 sc-eQTL 8.81e-01 0.0245 0.164 0.916 intMono L2
ENSG00000079950 STX7 874268 sc-eQTL 3.27e-01 0.154 0.156 0.916 intMono L2
ENSG00000093134 VNN3 652701 sc-eQTL 9.13e-01 -0.0174 0.158 0.916 intMono L2
ENSG00000112299 VNN1 673411 sc-eQTL 9.06e-01 0.0186 0.156 0.916 intMono L2
ENSG00000112303 VNN2 624007 sc-eQTL 2.43e-01 -0.186 0.158 0.916 intMono L2
ENSG00000112306 RPS12 572897 sc-eQTL 2.11e-01 -0.0865 0.0689 0.916 intMono L2
ENSG00000118515 SGK1 -930646 sc-eQTL 7.63e-01 -0.0351 0.116 0.916 intMono L2
ENSG00000146409 SLC18B1 574127 sc-eQTL 9.17e-03 -0.436 0.166 0.916 intMono L2
ENSG00000286887 AL355881.1 -908835 sc-eQTL 4.88e-02 -0.316 0.16 0.916 intMono L2
ENSG00000028839 TBPL1 -564704 sc-eQTL 8.32e-02 -0.297 0.171 0.916 ncMono L2
ENSG00000079950 STX7 874268 sc-eQTL 7.43e-01 -0.0381 0.116 0.916 ncMono L2
ENSG00000093134 VNN3 652701 sc-eQTL 3.87e-03 -0.469 0.161 0.916 ncMono L2
ENSG00000112299 VNN1 673411 sc-eQTL 6.98e-01 -0.0632 0.163 0.916 ncMono L2
ENSG00000112303 VNN2 624007 sc-eQTL 7.16e-02 -0.281 0.155 0.916 ncMono L2
ENSG00000112306 RPS12 572897 sc-eQTL 3.31e-01 0.0762 0.0783 0.916 ncMono L2
ENSG00000118515 SGK1 -930646 sc-eQTL 6.96e-01 -0.0434 0.111 0.916 ncMono L2
ENSG00000146409 SLC18B1 574127 sc-eQTL 3.88e-01 0.12 0.138 0.916 ncMono L2
ENSG00000286887 AL355881.1 -908835 sc-eQTL 2.41e-01 0.172 0.146 0.916 ncMono L2
ENSG00000028839 TBPL1 -564704 sc-eQTL 4.52e-01 0.151 0.201 0.915 pDC L2
ENSG00000079950 STX7 874268 sc-eQTL 1.04e-01 -0.217 0.133 0.915 pDC L2
ENSG00000093134 VNN3 652701 sc-eQTL 3.89e-01 -0.116 0.134 0.915 pDC L2
ENSG00000112299 VNN1 673411 sc-eQTL 4.79e-02 -0.27 0.135 0.915 pDC L2
ENSG00000112303 VNN2 624007 sc-eQTL 5.66e-01 0.0937 0.163 0.915 pDC L2
ENSG00000112306 RPS12 572897 sc-eQTL 2.64e-02 -0.248 0.111 0.915 pDC L2
ENSG00000118515 SGK1 -930646 sc-eQTL 5.97e-01 -0.0604 0.114 0.915 pDC L2
ENSG00000146409 SLC18B1 574127 sc-eQTL 1.55e-01 -0.236 0.165 0.915 pDC L2
ENSG00000286438 AL591115.1 284338 sc-eQTL 6.02e-01 -0.0832 0.159 0.915 pDC L2
ENSG00000286887 AL355881.1 -908835 sc-eQTL 8.42e-01 -0.0283 0.141 0.915 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -564704 sc-eQTL 1.96e-01 0.221 0.17 0.919 B_Memory LOneK1K
ENSG00000079931 MOXD1 985991 sc-eQTL 2.11e-01 0.208 0.166 0.919 B_Memory LOneK1K
ENSG00000079950 STX7 874268 sc-eQTL 1.90e-03 0.29 0.0921 0.919 B_Memory LOneK1K
ENSG00000112303 VNN2 624007 sc-eQTL 2.85e-01 -0.159 0.149 0.919 B_Memory LOneK1K
ENSG00000112306 RPS12 572897 sc-eQTL 5.27e-02 0.164 0.0841 0.919 B_Memory LOneK1K
ENSG00000118515 SGK1 -930646 sc-eQTL 1.29e-01 -0.201 0.132 0.919 B_Memory LOneK1K
ENSG00000146409 SLC18B1 574127 sc-eQTL 6.47e-01 0.0713 0.156 0.919 B_Memory LOneK1K
ENSG00000028839 TBPL1 -564704 sc-eQTL 5.36e-03 -0.444 0.158 0.919 B_Naive LOneK1K
ENSG00000079931 MOXD1 985991 sc-eQTL 2.44e-01 0.205 0.176 0.919 B_Naive LOneK1K
ENSG00000079950 STX7 874268 sc-eQTL 1.59e-02 0.173 0.0714 0.919 B_Naive LOneK1K
ENSG00000112303 VNN2 624007 sc-eQTL 9.81e-02 -0.232 0.14 0.919 B_Naive LOneK1K
ENSG00000112306 RPS12 572897 sc-eQTL 7.10e-02 0.153 0.0843 0.919 B_Naive LOneK1K
ENSG00000118515 SGK1 -930646 sc-eQTL 5.29e-01 -0.0829 0.131 0.919 B_Naive LOneK1K
ENSG00000146409 SLC18B1 574127 sc-eQTL 4.29e-01 -0.127 0.16 0.919 B_Naive LOneK1K
ENSG00000028839 TBPL1 -564704 sc-eQTL 9.00e-01 0.0163 0.129 0.919 CD14_Mono LOneK1K
ENSG00000079950 STX7 874268 sc-eQTL 2.54e-01 0.103 0.0896 0.919 CD14_Mono LOneK1K
ENSG00000093134 VNN3 652701 sc-eQTL 8.15e-01 0.0342 0.146 0.919 CD14_Mono LOneK1K
ENSG00000112299 VNN1 673411 sc-eQTL 7.87e-01 0.0412 0.153 0.919 CD14_Mono LOneK1K
ENSG00000112303 VNN2 624007 sc-eQTL 3.05e-02 -0.218 0.0999 0.919 CD14_Mono LOneK1K
ENSG00000112306 RPS12 572897 sc-eQTL 6.52e-01 -0.0312 0.0692 0.919 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -930646 sc-eQTL 1.38e-01 -0.14 0.0939 0.919 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 574127 sc-eQTL 5.38e-01 -0.0759 0.123 0.919 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -908835 sc-eQTL 2.48e-02 -0.289 0.128 0.919 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -564704 sc-eQTL 3.96e-01 -0.141 0.166 0.918 CD16_Mono LOneK1K
ENSG00000079950 STX7 874268 sc-eQTL 5.28e-01 0.0692 0.11 0.918 CD16_Mono LOneK1K
ENSG00000093134 VNN3 652701 sc-eQTL 8.27e-02 -0.279 0.16 0.918 CD16_Mono LOneK1K
ENSG00000112299 VNN1 673411 sc-eQTL 8.56e-01 -0.029 0.16 0.918 CD16_Mono LOneK1K
ENSG00000112303 VNN2 624007 sc-eQTL 1.32e-01 -0.227 0.15 0.918 CD16_Mono LOneK1K
ENSG00000112306 RPS12 572897 sc-eQTL 5.21e-01 0.0411 0.0639 0.918 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -930646 sc-eQTL 5.38e-01 -0.0597 0.0967 0.918 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 574127 sc-eQTL 3.70e-02 -0.323 0.154 0.918 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -908835 sc-eQTL 2.13e-01 -0.175 0.14 0.918 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -564704 sc-eQTL 1.43e-01 0.202 0.137 0.918 NK_CD56dim LOneK1K
ENSG00000079950 STX7 874268 sc-eQTL 7.01e-02 0.234 0.129 0.918 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 624007 sc-eQTL 9.36e-01 0.0131 0.164 0.918 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 572897 sc-eQTL 4.07e-01 0.0556 0.0668 0.918 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -930646 sc-eQTL 7.57e-01 -0.0428 0.138 0.918 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000093134 VNN3 652701 eQTL 0.023 -0.0641 0.0281 0.0 0.0 0.0667
ENSG00000112303 VNN2 624007 pQTL 0.0325 -0.108 0.0503 0.0 0.0 0.0647
ENSG00000234484 AL032821.1 634791 eQTL 0.0258 0.134 0.06 0.0 0.0 0.0667

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina