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Genes within 1Mb (chr6:133384452:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -567718 sc-eQTL 4.91e-01 0.059 0.0855 0.519 B L1
ENSG00000079931 MOXD1 982977 sc-eQTL 7.77e-01 -0.0256 0.0904 0.519 B L1
ENSG00000079950 STX7 871254 sc-eQTL 1.56e-01 0.0484 0.0339 0.519 B L1
ENSG00000112303 VNN2 620993 sc-eQTL 9.87e-01 0.00102 0.0641 0.519 B L1
ENSG00000112306 RPS12 569883 sc-eQTL 8.92e-01 0.00529 0.0388 0.519 B L1
ENSG00000118515 SGK1 -933660 sc-eQTL 2.58e-02 -0.133 0.0591 0.519 B L1
ENSG00000146409 SLC18B1 571113 sc-eQTL 7.20e-01 -0.0293 0.0816 0.519 B L1
ENSG00000028839 TBPL1 -567718 sc-eQTL 4.34e-01 0.0493 0.0629 0.519 CD4T L1
ENSG00000079950 STX7 871254 sc-eQTL 9.44e-01 0.00459 0.0655 0.519 CD4T L1
ENSG00000112303 VNN2 620993 sc-eQTL 1.80e-01 0.076 0.0565 0.519 CD4T L1
ENSG00000112306 RPS12 569883 sc-eQTL 5.48e-01 -0.0232 0.0385 0.519 CD4T L1
ENSG00000118515 SGK1 -933660 sc-eQTL 4.60e-01 -0.0384 0.0518 0.519 CD4T L1
ENSG00000146409 SLC18B1 571113 sc-eQTL 2.91e-01 -0.0824 0.0778 0.519 CD4T L1
ENSG00000028839 TBPL1 -567718 sc-eQTL 8.43e-01 0.0124 0.0623 0.519 CD8T L1
ENSG00000079950 STX7 871254 sc-eQTL 9.10e-01 0.0074 0.0651 0.519 CD8T L1
ENSG00000112303 VNN2 620993 sc-eQTL 4.67e-01 0.0552 0.0759 0.519 CD8T L1
ENSG00000112306 RPS12 569883 sc-eQTL 6.52e-01 -0.0117 0.026 0.519 CD8T L1
ENSG00000118515 SGK1 -933660 sc-eQTL 9.28e-01 0.00361 0.04 0.519 CD8T L1
ENSG00000146409 SLC18B1 571113 sc-eQTL 5.26e-01 -0.0499 0.0784 0.519 CD8T L1
ENSG00000028839 TBPL1 -567718 sc-eQTL 3.48e-01 0.0892 0.0948 0.523 DC L1
ENSG00000079950 STX7 871254 sc-eQTL 2.17e-01 0.0728 0.0588 0.523 DC L1
ENSG00000093134 VNN3 649687 sc-eQTL 8.67e-01 0.0123 0.0732 0.523 DC L1
ENSG00000112299 VNN1 670397 sc-eQTL 6.89e-01 -0.0316 0.079 0.523 DC L1
ENSG00000112303 VNN2 620993 sc-eQTL 9.94e-01 0.000605 0.0846 0.523 DC L1
ENSG00000112306 RPS12 569883 sc-eQTL 5.31e-02 -0.0914 0.047 0.523 DC L1
ENSG00000118515 SGK1 -933660 sc-eQTL 4.75e-01 -0.0393 0.055 0.523 DC L1
ENSG00000146409 SLC18B1 571113 sc-eQTL 1.62e-01 -0.105 0.0747 0.523 DC L1
ENSG00000286438 AL591115.1 281324 sc-eQTL 7.54e-01 0.0214 0.0683 0.523 DC L1
ENSG00000286887 AL355881.1 -911849 sc-eQTL 9.22e-01 -0.00837 0.0851 0.523 DC L1
ENSG00000028839 TBPL1 -567718 sc-eQTL 5.31e-01 -0.0418 0.0666 0.519 Mono L1
ENSG00000079950 STX7 871254 sc-eQTL 3.72e-01 0.0398 0.0445 0.519 Mono L1
ENSG00000093134 VNN3 649687 sc-eQTL 8.86e-01 -0.011 0.0766 0.519 Mono L1
ENSG00000112299 VNN1 670397 sc-eQTL 9.51e-02 0.137 0.0819 0.519 Mono L1
ENSG00000112303 VNN2 620993 sc-eQTL 5.92e-01 -0.0312 0.0581 0.519 Mono L1
ENSG00000112306 RPS12 569883 sc-eQTL 7.89e-01 -0.00934 0.0348 0.519 Mono L1
ENSG00000118515 SGK1 -933660 sc-eQTL 3.42e-01 0.0467 0.0491 0.519 Mono L1
ENSG00000146409 SLC18B1 571113 sc-eQTL 5.11e-01 -0.0454 0.0689 0.519 Mono L1
ENSG00000286887 AL355881.1 -911849 sc-eQTL 7.20e-01 -0.0243 0.0677 0.519 Mono L1
ENSG00000028839 TBPL1 -567718 sc-eQTL 4.99e-01 0.0492 0.0726 0.519 NK L1
ENSG00000079950 STX7 871254 sc-eQTL 1.62e-02 0.161 0.0663 0.519 NK L1
ENSG00000112303 VNN2 620993 sc-eQTL 3.39e-01 0.0799 0.0834 0.519 NK L1
ENSG00000112306 RPS12 569883 sc-eQTL 1.41e-01 -0.0509 0.0344 0.519 NK L1
ENSG00000118515 SGK1 -933660 sc-eQTL 9.08e-02 -0.108 0.0635 0.519 NK L1
ENSG00000028839 TBPL1 -567718 sc-eQTL 3.45e-01 -0.0808 0.0854 0.519 Other_T L1
ENSG00000079950 STX7 871254 sc-eQTL 2.94e-01 0.0707 0.0672 0.519 Other_T L1
ENSG00000112303 VNN2 620993 sc-eQTL 7.04e-01 0.031 0.0815 0.519 Other_T L1
ENSG00000112306 RPS12 569883 sc-eQTL 2.00e-01 -0.0413 0.0322 0.519 Other_T L1
ENSG00000118515 SGK1 -933660 sc-eQTL 6.70e-01 -0.0253 0.0594 0.519 Other_T L1
ENSG00000146409 SLC18B1 571113 sc-eQTL 8.11e-01 -0.0212 0.0884 0.519 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -567718 sc-eQTL 7.19e-01 0.0364 0.101 0.513 B_Activated L2
ENSG00000079931 MOXD1 982977 sc-eQTL 6.72e-01 -0.0391 0.092 0.513 B_Activated L2
ENSG00000079950 STX7 871254 sc-eQTL 7.15e-01 -0.0315 0.0863 0.513 B_Activated L2
ENSG00000112303 VNN2 620993 sc-eQTL 7.91e-01 0.0243 0.0918 0.513 B_Activated L2
ENSG00000112306 RPS12 569883 sc-eQTL 8.10e-01 0.0118 0.0492 0.513 B_Activated L2
ENSG00000118515 SGK1 -933660 sc-eQTL 9.80e-01 -0.0022 0.0878 0.513 B_Activated L2
ENSG00000146409 SLC18B1 571113 sc-eQTL 4.61e-01 0.0635 0.0861 0.513 B_Activated L2
ENSG00000028839 TBPL1 -567718 sc-eQTL 6.90e-02 0.173 0.0947 0.517 B_Intermediate L2
ENSG00000079931 MOXD1 982977 sc-eQTL 3.94e-01 0.0714 0.0836 0.517 B_Intermediate L2
ENSG00000079950 STX7 871254 sc-eQTL 2.90e-02 0.119 0.0542 0.517 B_Intermediate L2
ENSG00000112303 VNN2 620993 sc-eQTL 3.59e-01 0.0757 0.0824 0.517 B_Intermediate L2
ENSG00000112306 RPS12 569883 sc-eQTL 6.58e-01 0.0224 0.0505 0.517 B_Intermediate L2
ENSG00000118515 SGK1 -933660 sc-eQTL 6.75e-01 -0.0367 0.0874 0.517 B_Intermediate L2
ENSG00000146409 SLC18B1 571113 sc-eQTL 3.36e-01 -0.0877 0.0909 0.517 B_Intermediate L2
ENSG00000028839 TBPL1 -567718 sc-eQTL 7.92e-01 0.0241 0.0913 0.522 B_Memory L2
ENSG00000079931 MOXD1 982977 sc-eQTL 3.57e-02 -0.176 0.0833 0.522 B_Memory L2
ENSG00000079950 STX7 871254 sc-eQTL 4.26e-03 0.187 0.0648 0.522 B_Memory L2
ENSG00000112303 VNN2 620993 sc-eQTL 6.29e-01 -0.0418 0.0863 0.522 B_Memory L2
ENSG00000112306 RPS12 569883 sc-eQTL 7.23e-01 -0.0148 0.0416 0.522 B_Memory L2
ENSG00000118515 SGK1 -933660 sc-eQTL 9.65e-01 0.00337 0.0764 0.522 B_Memory L2
ENSG00000146409 SLC18B1 571113 sc-eQTL 7.65e-02 0.153 0.0862 0.522 B_Memory L2
ENSG00000028839 TBPL1 -567718 sc-eQTL 9.42e-01 -0.00632 0.0864 0.519 B_Naive1 L2
ENSG00000079931 MOXD1 982977 sc-eQTL 8.80e-01 -0.0143 0.095 0.519 B_Naive1 L2
ENSG00000079950 STX7 871254 sc-eQTL 2.21e-01 0.0508 0.0414 0.519 B_Naive1 L2
ENSG00000112303 VNN2 620993 sc-eQTL 1.37e-01 -0.12 0.0802 0.519 B_Naive1 L2
ENSG00000112306 RPS12 569883 sc-eQTL 9.43e-01 0.0033 0.0459 0.519 B_Naive1 L2
ENSG00000118515 SGK1 -933660 sc-eQTL 2.58e-01 -0.0813 0.0716 0.519 B_Naive1 L2
ENSG00000146409 SLC18B1 571113 sc-eQTL 8.83e-01 -0.013 0.0886 0.519 B_Naive1 L2
ENSG00000028839 TBPL1 -567718 sc-eQTL 7.72e-01 -0.0269 0.0927 0.521 B_Naive2 L2
ENSG00000079931 MOXD1 982977 sc-eQTL 6.86e-01 -0.0366 0.0904 0.521 B_Naive2 L2
ENSG00000079950 STX7 871254 sc-eQTL 4.32e-01 0.0387 0.0492 0.521 B_Naive2 L2
ENSG00000112303 VNN2 620993 sc-eQTL 3.73e-01 0.0806 0.0903 0.521 B_Naive2 L2
ENSG00000112306 RPS12 569883 sc-eQTL 2.86e-01 0.0511 0.0477 0.521 B_Naive2 L2
ENSG00000118515 SGK1 -933660 sc-eQTL 6.29e-01 -0.0409 0.0846 0.521 B_Naive2 L2
ENSG00000146409 SLC18B1 571113 sc-eQTL 3.05e-01 -0.0937 0.0911 0.521 B_Naive2 L2
ENSG00000028839 TBPL1 -567718 sc-eQTL 6.82e-01 -0.0367 0.0896 0.514 CD4_CTL L2
ENSG00000079950 STX7 871254 sc-eQTL 3.98e-01 -0.0754 0.0889 0.514 CD4_CTL L2
ENSG00000112303 VNN2 620993 sc-eQTL 3.48e-02 0.189 0.0888 0.514 CD4_CTL L2
ENSG00000112306 RPS12 569883 sc-eQTL 7.06e-01 -0.0157 0.0415 0.514 CD4_CTL L2
ENSG00000118515 SGK1 -933660 sc-eQTL 7.93e-01 0.0189 0.0719 0.514 CD4_CTL L2
ENSG00000146409 SLC18B1 571113 sc-eQTL 8.36e-01 0.0174 0.0837 0.514 CD4_CTL L2
ENSG00000028839 TBPL1 -567718 sc-eQTL 8.04e-01 -0.018 0.0723 0.519 CD4_Naive L2
ENSG00000079950 STX7 871254 sc-eQTL 2.77e-01 -0.0771 0.0707 0.519 CD4_Naive L2
ENSG00000112303 VNN2 620993 sc-eQTL 4.80e-01 0.0464 0.0656 0.519 CD4_Naive L2
ENSG00000112306 RPS12 569883 sc-eQTL 4.23e-01 -0.0342 0.0425 0.519 CD4_Naive L2
ENSG00000118515 SGK1 -933660 sc-eQTL 3.87e-01 -0.0451 0.0521 0.519 CD4_Naive L2
ENSG00000146409 SLC18B1 571113 sc-eQTL 1.62e-01 -0.114 0.0816 0.519 CD4_Naive L2
ENSG00000028839 TBPL1 -567718 sc-eQTL 4.21e-01 0.0622 0.0772 0.519 CD4_TCM L2
ENSG00000079950 STX7 871254 sc-eQTL 1.74e-01 0.106 0.0775 0.519 CD4_TCM L2
ENSG00000112303 VNN2 620993 sc-eQTL 7.68e-01 0.0227 0.0767 0.519 CD4_TCM L2
ENSG00000112306 RPS12 569883 sc-eQTL 6.93e-01 -0.0157 0.0398 0.519 CD4_TCM L2
ENSG00000118515 SGK1 -933660 sc-eQTL 6.00e-01 -0.0292 0.0556 0.519 CD4_TCM L2
ENSG00000146409 SLC18B1 571113 sc-eQTL 6.30e-01 0.0444 0.0921 0.519 CD4_TCM L2
ENSG00000028839 TBPL1 -567718 sc-eQTL 1.13e-01 0.144 0.0904 0.519 CD4_TEM L2
ENSG00000079950 STX7 871254 sc-eQTL 8.86e-01 0.0131 0.0911 0.519 CD4_TEM L2
ENSG00000112303 VNN2 620993 sc-eQTL 4.58e-01 0.0649 0.0873 0.519 CD4_TEM L2
ENSG00000112306 RPS12 569883 sc-eQTL 4.98e-01 -0.0243 0.0358 0.519 CD4_TEM L2
ENSG00000118515 SGK1 -933660 sc-eQTL 7.36e-01 -0.0208 0.0616 0.519 CD4_TEM L2
ENSG00000146409 SLC18B1 571113 sc-eQTL 2.32e-01 0.106 0.0888 0.519 CD4_TEM L2
ENSG00000028839 TBPL1 -567718 sc-eQTL 9.44e-01 0.00559 0.0798 0.519 CD8_CTL L2
ENSG00000079950 STX7 871254 sc-eQTL 7.36e-01 0.0252 0.0746 0.519 CD8_CTL L2
ENSG00000112303 VNN2 620993 sc-eQTL 3.62e-01 0.0773 0.0846 0.519 CD8_CTL L2
ENSG00000112306 RPS12 569883 sc-eQTL 7.99e-01 -0.0116 0.0454 0.519 CD8_CTL L2
ENSG00000118515 SGK1 -933660 sc-eQTL 7.31e-01 0.0263 0.0766 0.519 CD8_CTL L2
ENSG00000146409 SLC18B1 571113 sc-eQTL 5.32e-01 -0.0549 0.0878 0.519 CD8_CTL L2
ENSG00000028839 TBPL1 -567718 sc-eQTL 9.44e-01 -0.00602 0.0853 0.519 CD8_Naive L2
ENSG00000079950 STX7 871254 sc-eQTL 6.03e-01 0.0474 0.0909 0.519 CD8_Naive L2
ENSG00000112303 VNN2 620993 sc-eQTL 9.38e-01 -0.00607 0.0785 0.519 CD8_Naive L2
ENSG00000112306 RPS12 569883 sc-eQTL 4.21e-01 -0.0362 0.0448 0.519 CD8_Naive L2
ENSG00000118515 SGK1 -933660 sc-eQTL 8.40e-01 -0.0114 0.0564 0.519 CD8_Naive L2
ENSG00000146409 SLC18B1 571113 sc-eQTL 1.83e-01 -0.12 0.0897 0.519 CD8_Naive L2
ENSG00000028839 TBPL1 -567718 sc-eQTL 3.50e-01 -0.09 0.0961 0.516 CD8_TCM L2
ENSG00000079950 STX7 871254 sc-eQTL 4.04e-01 0.0745 0.089 0.516 CD8_TCM L2
ENSG00000112303 VNN2 620993 sc-eQTL 9.37e-01 0.00699 0.0884 0.516 CD8_TCM L2
ENSG00000112306 RPS12 569883 sc-eQTL 3.42e-01 -0.041 0.043 0.516 CD8_TCM L2
ENSG00000118515 SGK1 -933660 sc-eQTL 9.09e-01 0.00819 0.0714 0.516 CD8_TCM L2
ENSG00000146409 SLC18B1 571113 sc-eQTL 6.29e-01 -0.0457 0.0944 0.516 CD8_TCM L2
ENSG00000028839 TBPL1 -567718 sc-eQTL 6.19e-01 0.0439 0.0883 0.516 CD8_TEM L2
ENSG00000079950 STX7 871254 sc-eQTL 5.50e-01 -0.0577 0.0963 0.516 CD8_TEM L2
ENSG00000112303 VNN2 620993 sc-eQTL 2.51e-01 0.11 0.0955 0.516 CD8_TEM L2
ENSG00000112306 RPS12 569883 sc-eQTL 7.21e-01 0.0185 0.0515 0.516 CD8_TEM L2
ENSG00000118515 SGK1 -933660 sc-eQTL 2.87e-01 0.09 0.0842 0.516 CD8_TEM L2
ENSG00000146409 SLC18B1 571113 sc-eQTL 4.44e-01 0.0747 0.0973 0.516 CD8_TEM L2
ENSG00000028839 TBPL1 -567718 sc-eQTL 7.25e-02 -0.16 0.0889 0.519 MAIT L2
ENSG00000079950 STX7 871254 sc-eQTL 7.65e-01 -0.0255 0.0851 0.519 MAIT L2
ENSG00000112303 VNN2 620993 sc-eQTL 9.35e-01 0.00712 0.0865 0.519 MAIT L2
ENSG00000112306 RPS12 569883 sc-eQTL 4.60e-01 -0.0315 0.0425 0.519 MAIT L2
ENSG00000118515 SGK1 -933660 sc-eQTL 5.14e-01 -0.0391 0.0599 0.519 MAIT L2
ENSG00000146409 SLC18B1 571113 sc-eQTL 6.59e-01 -0.0395 0.0892 0.519 MAIT L2
ENSG00000028839 TBPL1 -567718 sc-eQTL 4.85e-01 -0.0671 0.0959 0.518 NK_CD56bright L2
ENSG00000079950 STX7 871254 sc-eQTL 5.76e-01 0.0499 0.089 0.518 NK_CD56bright L2
ENSG00000112303 VNN2 620993 sc-eQTL 3.17e-01 -0.0905 0.0902 0.518 NK_CD56bright L2
ENSG00000112306 RPS12 569883 sc-eQTL 8.27e-01 -0.011 0.0504 0.518 NK_CD56bright L2
ENSG00000118515 SGK1 -933660 sc-eQTL 3.45e-01 -0.0712 0.0752 0.518 NK_CD56bright L2
ENSG00000028839 TBPL1 -567718 sc-eQTL 8.91e-01 -0.0107 0.078 0.519 NK_CD56dim L2
ENSG00000079950 STX7 871254 sc-eQTL 3.10e-01 0.0725 0.0713 0.519 NK_CD56dim L2
ENSG00000112303 VNN2 620993 sc-eQTL 4.98e-01 0.0607 0.0893 0.519 NK_CD56dim L2
ENSG00000112306 RPS12 569883 sc-eQTL 1.16e-01 -0.0556 0.0353 0.519 NK_CD56dim L2
ENSG00000118515 SGK1 -933660 sc-eQTL 5.07e-01 -0.0521 0.0785 0.519 NK_CD56dim L2
ENSG00000028839 TBPL1 -567718 sc-eQTL 5.01e-01 0.0668 0.099 0.521 NK_HLA L2
ENSG00000079950 STX7 871254 sc-eQTL 2.28e-01 0.109 0.0899 0.521 NK_HLA L2
ENSG00000112303 VNN2 620993 sc-eQTL 7.24e-01 0.0323 0.0913 0.521 NK_HLA L2
ENSG00000112306 RPS12 569883 sc-eQTL 3.86e-01 -0.0369 0.0424 0.521 NK_HLA L2
ENSG00000118515 SGK1 -933660 sc-eQTL 6.42e-01 0.0391 0.084 0.521 NK_HLA L2
ENSG00000028839 TBPL1 -567718 sc-eQTL 2.34e-01 0.0967 0.081 0.519 NK_cytokine L2
ENSG00000079950 STX7 871254 sc-eQTL 2.93e-02 0.171 0.0779 0.519 NK_cytokine L2
ENSG00000112303 VNN2 620993 sc-eQTL 1.91e-01 0.116 0.0882 0.519 NK_cytokine L2
ENSG00000112306 RPS12 569883 sc-eQTL 3.70e-01 -0.043 0.0479 0.519 NK_cytokine L2
ENSG00000118515 SGK1 -933660 sc-eQTL 4.55e-03 -0.225 0.0784 0.519 NK_cytokine L2
ENSG00000028839 TBPL1 -567718 sc-eQTL 4.19e-01 -0.0899 0.111 0.522 PB L2
ENSG00000079931 MOXD1 982977 sc-eQTL 7.34e-01 -0.0322 0.0947 0.522 PB L2
ENSG00000079950 STX7 871254 sc-eQTL 7.99e-01 0.0202 0.0791 0.522 PB L2
ENSG00000112303 VNN2 620993 sc-eQTL 5.41e-01 0.0593 0.0965 0.522 PB L2
ENSG00000112306 RPS12 569883 sc-eQTL 3.69e-01 -0.0493 0.0547 0.522 PB L2
ENSG00000118515 SGK1 -933660 sc-eQTL 4.95e-01 -0.0606 0.0885 0.522 PB L2
ENSG00000146409 SLC18B1 571113 sc-eQTL 3.80e-01 0.0903 0.103 0.522 PB L2
ENSG00000028839 TBPL1 -567718 sc-eQTL 8.52e-01 -0.0173 0.0928 0.52 Pro_T L2
ENSG00000079950 STX7 871254 sc-eQTL 3.35e-01 0.0798 0.0827 0.52 Pro_T L2
ENSG00000112303 VNN2 620993 sc-eQTL 6.63e-01 -0.0388 0.0888 0.52 Pro_T L2
ENSG00000112306 RPS12 569883 sc-eQTL 1.04e-01 -0.0546 0.0334 0.52 Pro_T L2
ENSG00000118515 SGK1 -933660 sc-eQTL 2.12e-01 0.0841 0.0671 0.52 Pro_T L2
ENSG00000146409 SLC18B1 571113 sc-eQTL 8.60e-02 0.149 0.0864 0.52 Pro_T L2
ENSG00000028839 TBPL1 -567718 sc-eQTL 1.49e-01 0.132 0.0914 0.519 Treg L2
ENSG00000079950 STX7 871254 sc-eQTL 9.04e-01 0.0104 0.0866 0.519 Treg L2
ENSG00000112303 VNN2 620993 sc-eQTL 4.47e-01 0.0554 0.0727 0.519 Treg L2
ENSG00000112306 RPS12 569883 sc-eQTL 7.07e-01 0.0121 0.0322 0.519 Treg L2
ENSG00000118515 SGK1 -933660 sc-eQTL 1.42e-01 0.0996 0.0675 0.519 Treg L2
ENSG00000146409 SLC18B1 571113 sc-eQTL 4.43e-02 -0.182 0.0902 0.519 Treg L2
ENSG00000028839 TBPL1 -567718 sc-eQTL 6.02e-01 -0.0506 0.0969 0.512 cDC L2
ENSG00000079950 STX7 871254 sc-eQTL 8.56e-01 0.0138 0.0762 0.512 cDC L2
ENSG00000093134 VNN3 649687 sc-eQTL 2.24e-01 0.0918 0.0753 0.512 cDC L2
ENSG00000112299 VNN1 670397 sc-eQTL 5.88e-01 0.0482 0.0889 0.512 cDC L2
ENSG00000112303 VNN2 620993 sc-eQTL 3.71e-01 0.0776 0.0865 0.512 cDC L2
ENSG00000112306 RPS12 569883 sc-eQTL 4.92e-01 -0.0294 0.0427 0.512 cDC L2
ENSG00000118515 SGK1 -933660 sc-eQTL 3.05e-01 -0.0739 0.0719 0.512 cDC L2
ENSG00000146409 SLC18B1 571113 sc-eQTL 9.15e-01 -0.00903 0.0847 0.512 cDC L2
ENSG00000286438 AL591115.1 281324 sc-eQTL 8.43e-01 -0.0134 0.0677 0.512 cDC L2
ENSG00000286887 AL355881.1 -911849 sc-eQTL 3.93e-01 -0.0712 0.0832 0.512 cDC L2
ENSG00000028839 TBPL1 -567718 sc-eQTL 6.74e-01 -0.032 0.0759 0.519 cMono_IL1B L2
ENSG00000079950 STX7 871254 sc-eQTL 5.52e-01 0.0343 0.0576 0.519 cMono_IL1B L2
ENSG00000093134 VNN3 649687 sc-eQTL 6.99e-01 -0.0315 0.0814 0.519 cMono_IL1B L2
ENSG00000112299 VNN1 670397 sc-eQTL 1.19e-01 0.128 0.0817 0.519 cMono_IL1B L2
ENSG00000112303 VNN2 620993 sc-eQTL 7.62e-01 -0.0199 0.0657 0.519 cMono_IL1B L2
ENSG00000112306 RPS12 569883 sc-eQTL 7.25e-01 -0.0128 0.0365 0.519 cMono_IL1B L2
ENSG00000118515 SGK1 -933660 sc-eQTL 8.31e-01 0.0116 0.0544 0.519 cMono_IL1B L2
ENSG00000146409 SLC18B1 571113 sc-eQTL 3.98e-01 -0.0595 0.0703 0.519 cMono_IL1B L2
ENSG00000286887 AL355881.1 -911849 sc-eQTL 6.08e-01 -0.0376 0.0732 0.519 cMono_IL1B L2
ENSG00000028839 TBPL1 -567718 sc-eQTL 4.40e-01 -0.0665 0.086 0.519 cMono_S100A L2
ENSG00000079950 STX7 871254 sc-eQTL 3.82e-02 0.128 0.0616 0.519 cMono_S100A L2
ENSG00000093134 VNN3 649687 sc-eQTL 7.44e-01 0.0254 0.0777 0.519 cMono_S100A L2
ENSG00000112299 VNN1 670397 sc-eQTL 6.45e-02 0.156 0.0837 0.519 cMono_S100A L2
ENSG00000112303 VNN2 620993 sc-eQTL 3.95e-01 -0.047 0.0552 0.519 cMono_S100A L2
ENSG00000112306 RPS12 569883 sc-eQTL 6.34e-01 -0.019 0.0398 0.519 cMono_S100A L2
ENSG00000118515 SGK1 -933660 sc-eQTL 5.89e-01 0.0246 0.0455 0.519 cMono_S100A L2
ENSG00000146409 SLC18B1 571113 sc-eQTL 5.06e-01 -0.0491 0.0736 0.519 cMono_S100A L2
ENSG00000286887 AL355881.1 -911849 sc-eQTL 3.48e-01 -0.0676 0.0719 0.519 cMono_S100A L2
ENSG00000028839 TBPL1 -567718 sc-eQTL 8.84e-01 -0.0169 0.115 0.515 gdT L2
ENSG00000079950 STX7 871254 sc-eQTL 3.46e-02 0.208 0.0977 0.515 gdT L2
ENSG00000112303 VNN2 620993 sc-eQTL 3.68e-01 -0.0989 0.11 0.515 gdT L2
ENSG00000112306 RPS12 569883 sc-eQTL 5.19e-02 -0.0809 0.0413 0.515 gdT L2
ENSG00000118515 SGK1 -933660 sc-eQTL 1.20e-01 0.122 0.0783 0.515 gdT L2
ENSG00000146409 SLC18B1 571113 sc-eQTL 6.68e-01 -0.0464 0.108 0.515 gdT L2
ENSG00000028839 TBPL1 -567718 sc-eQTL 4.95e-01 -0.0594 0.087 0.516 intMono L2
ENSG00000079950 STX7 871254 sc-eQTL 1.10e-01 0.133 0.0827 0.516 intMono L2
ENSG00000093134 VNN3 649687 sc-eQTL 5.49e-01 0.0504 0.0839 0.516 intMono L2
ENSG00000112299 VNN1 670397 sc-eQTL 1.66e-01 0.115 0.0827 0.516 intMono L2
ENSG00000112303 VNN2 620993 sc-eQTL 4.95e-01 0.0577 0.0843 0.516 intMono L2
ENSG00000112306 RPS12 569883 sc-eQTL 1.09e-01 -0.0587 0.0365 0.516 intMono L2
ENSG00000118515 SGK1 -933660 sc-eQTL 9.92e-01 0.000626 0.0617 0.516 intMono L2
ENSG00000146409 SLC18B1 571113 sc-eQTL 2.14e-01 -0.111 0.0891 0.516 intMono L2
ENSG00000286887 AL355881.1 -911849 sc-eQTL 9.67e-01 -0.00358 0.0855 0.516 intMono L2
ENSG00000028839 TBPL1 -567718 sc-eQTL 3.60e-01 0.0837 0.0913 0.511 ncMono L2
ENSG00000079950 STX7 871254 sc-eQTL 2.16e-01 -0.0764 0.0616 0.511 ncMono L2
ENSG00000093134 VNN3 649687 sc-eQTL 2.81e-01 -0.0941 0.087 0.511 ncMono L2
ENSG00000112299 VNN1 670397 sc-eQTL 9.02e-01 -0.0106 0.0866 0.511 ncMono L2
ENSG00000112303 VNN2 620993 sc-eQTL 3.77e-01 0.0735 0.0831 0.511 ncMono L2
ENSG00000112306 RPS12 569883 sc-eQTL 7.86e-01 0.0114 0.0418 0.511 ncMono L2
ENSG00000118515 SGK1 -933660 sc-eQTL 1.40e-01 0.087 0.0588 0.511 ncMono L2
ENSG00000146409 SLC18B1 571113 sc-eQTL 2.65e-01 0.0822 0.0735 0.511 ncMono L2
ENSG00000286887 AL355881.1 -911849 sc-eQTL 8.74e-01 -0.0124 0.078 0.511 ncMono L2
ENSG00000028839 TBPL1 -567718 sc-eQTL 9.13e-01 0.0117 0.106 0.508 pDC L2
ENSG00000079950 STX7 871254 sc-eQTL 3.06e-01 0.0723 0.0705 0.508 pDC L2
ENSG00000093134 VNN3 649687 sc-eQTL 1.68e-01 -0.0981 0.0708 0.508 pDC L2
ENSG00000112299 VNN1 670397 sc-eQTL 4.55e-01 -0.0542 0.0723 0.508 pDC L2
ENSG00000112303 VNN2 620993 sc-eQTL 1.64e-01 -0.12 0.0857 0.508 pDC L2
ENSG00000112306 RPS12 569883 sc-eQTL 1.90e-02 -0.138 0.0584 0.508 pDC L2
ENSG00000118515 SGK1 -933660 sc-eQTL 6.66e-01 -0.0261 0.0603 0.508 pDC L2
ENSG00000146409 SLC18B1 571113 sc-eQTL 3.77e-02 -0.182 0.0867 0.508 pDC L2
ENSG00000286438 AL591115.1 281324 sc-eQTL 6.51e-01 0.0382 0.0841 0.508 pDC L2
ENSG00000286887 AL355881.1 -911849 sc-eQTL 9.13e-01 -0.00821 0.0746 0.508 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -567718 sc-eQTL 1.80e-02 0.216 0.0906 0.519 B_Memory LOneK1K
ENSG00000079931 MOXD1 982977 sc-eQTL 3.68e-01 -0.0803 0.089 0.519 B_Memory LOneK1K
ENSG00000079950 STX7 871254 sc-eQTL 9.23e-04 0.165 0.0492 0.519 B_Memory LOneK1K
ENSG00000112303 VNN2 620993 sc-eQTL 3.08e-01 0.0815 0.0797 0.519 B_Memory LOneK1K
ENSG00000112306 RPS12 569883 sc-eQTL 9.04e-01 -0.00552 0.0455 0.519 B_Memory LOneK1K
ENSG00000118515 SGK1 -933660 sc-eQTL 8.76e-01 -0.0111 0.0712 0.519 B_Memory LOneK1K
ENSG00000146409 SLC18B1 571113 sc-eQTL 7.22e-01 0.0298 0.0835 0.519 B_Memory LOneK1K
ENSG00000028839 TBPL1 -567718 sc-eQTL 6.63e-01 -0.0378 0.0867 0.519 B_Naive LOneK1K
ENSG00000079931 MOXD1 982977 sc-eQTL 8.96e-01 0.0125 0.0952 0.519 B_Naive LOneK1K
ENSG00000079950 STX7 871254 sc-eQTL 1.81e-01 0.0523 0.0389 0.519 B_Naive LOneK1K
ENSG00000112303 VNN2 620993 sc-eQTL 5.95e-01 -0.0404 0.0759 0.519 B_Naive LOneK1K
ENSG00000112306 RPS12 569883 sc-eQTL 5.63e-01 0.0266 0.0459 0.519 B_Naive LOneK1K
ENSG00000118515 SGK1 -933660 sc-eQTL 1.68e-01 -0.098 0.0708 0.519 B_Naive LOneK1K
ENSG00000146409 SLC18B1 571113 sc-eQTL 3.55e-01 -0.0802 0.0865 0.519 B_Naive LOneK1K
ENSG00000028839 TBPL1 -567718 sc-eQTL 3.39e-01 -0.0663 0.0691 0.519 CD14_Mono LOneK1K
ENSG00000079950 STX7 871254 sc-eQTL 1.72e-01 0.0658 0.048 0.519 CD14_Mono LOneK1K
ENSG00000093134 VNN3 649687 sc-eQTL 7.22e-01 -0.028 0.0785 0.519 CD14_Mono LOneK1K
ENSG00000112299 VNN1 670397 sc-eQTL 5.77e-02 0.155 0.0812 0.519 CD14_Mono LOneK1K
ENSG00000112303 VNN2 620993 sc-eQTL 5.44e-01 -0.0328 0.0541 0.519 CD14_Mono LOneK1K
ENSG00000112306 RPS12 569883 sc-eQTL 6.75e-01 -0.0156 0.0371 0.519 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -933660 sc-eQTL 7.45e-01 0.0165 0.0506 0.519 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 571113 sc-eQTL 3.28e-01 -0.0646 0.0659 0.519 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -911849 sc-eQTL 3.47e-01 -0.0651 0.0691 0.519 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -567718 sc-eQTL 8.41e-01 0.0178 0.0888 0.519 CD16_Mono LOneK1K
ENSG00000079950 STX7 871254 sc-eQTL 9.75e-01 0.00186 0.0586 0.519 CD16_Mono LOneK1K
ENSG00000093134 VNN3 649687 sc-eQTL 6.13e-01 -0.0436 0.0861 0.519 CD16_Mono LOneK1K
ENSG00000112299 VNN1 670397 sc-eQTL 8.96e-01 0.0111 0.0854 0.519 CD16_Mono LOneK1K
ENSG00000112303 VNN2 620993 sc-eQTL 2.55e-01 0.0916 0.0802 0.519 CD16_Mono LOneK1K
ENSG00000112306 RPS12 569883 sc-eQTL 8.35e-01 -0.00712 0.0341 0.519 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -933660 sc-eQTL 4.05e-01 0.0431 0.0516 0.519 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 571113 sc-eQTL 2.50e-01 -0.0953 0.0827 0.519 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -911849 sc-eQTL 9.69e-01 0.00295 0.075 0.519 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -567718 sc-eQTL 3.84e-01 0.0625 0.0716 0.519 NK_CD56dim LOneK1K
ENSG00000079950 STX7 871254 sc-eQTL 1.31e-02 0.166 0.0664 0.519 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 620993 sc-eQTL 2.00e-01 0.109 0.085 0.519 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 569883 sc-eQTL 1.52e-01 -0.0498 0.0347 0.519 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -933660 sc-eQTL 4.22e-02 -0.146 0.0712 0.519 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000112299 VNN1 670397 pQTL 2.08e-06 0.165 0.0346 0.0 0.0 0.465

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina