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Genes within 1Mb (chr6:133382187:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -569983 sc-eQTL 9.46e-01 -0.00649 0.0959 0.256 B L1
ENSG00000079931 MOXD1 980712 sc-eQTL 8.31e-01 -0.0217 0.101 0.256 B L1
ENSG00000079950 STX7 868989 sc-eQTL 3.23e-01 -0.0377 0.0381 0.256 B L1
ENSG00000112303 VNN2 618728 sc-eQTL 8.08e-01 -0.0175 0.0718 0.256 B L1
ENSG00000112306 RPS12 567618 sc-eQTL 4.65e-01 0.0318 0.0434 0.256 B L1
ENSG00000118515 SGK1 -935925 sc-eQTL 2.58e-02 -0.149 0.0662 0.256 B L1
ENSG00000146409 SLC18B1 568848 sc-eQTL 6.67e-02 -0.167 0.0907 0.256 B L1
ENSG00000028839 TBPL1 -569983 sc-eQTL 5.01e-01 -0.0477 0.0708 0.256 CD4T L1
ENSG00000079950 STX7 868989 sc-eQTL 4.50e-02 -0.147 0.073 0.256 CD4T L1
ENSG00000112303 VNN2 618728 sc-eQTL 6.12e-01 0.0324 0.0638 0.256 CD4T L1
ENSG00000112306 RPS12 567618 sc-eQTL 9.80e-01 0.00108 0.0434 0.256 CD4T L1
ENSG00000118515 SGK1 -935925 sc-eQTL 2.23e-01 -0.071 0.0581 0.256 CD4T L1
ENSG00000146409 SLC18B1 568848 sc-eQTL 5.17e-03 -0.243 0.0862 0.256 CD4T L1
ENSG00000028839 TBPL1 -569983 sc-eQTL 9.70e-01 -0.00262 0.0701 0.256 CD8T L1
ENSG00000079950 STX7 868989 sc-eQTL 6.09e-01 -0.0374 0.0731 0.256 CD8T L1
ENSG00000112303 VNN2 618728 sc-eQTL 5.56e-01 0.0503 0.0853 0.256 CD8T L1
ENSG00000112306 RPS12 567618 sc-eQTL 5.63e-01 0.0169 0.0292 0.256 CD8T L1
ENSG00000118515 SGK1 -935925 sc-eQTL 6.45e-01 -0.0207 0.045 0.256 CD8T L1
ENSG00000146409 SLC18B1 568848 sc-eQTL 4.39e-02 -0.177 0.0874 0.256 CD8T L1
ENSG00000028839 TBPL1 -569983 sc-eQTL 9.78e-01 0.00312 0.111 0.259 DC L1
ENSG00000079950 STX7 868989 sc-eQTL 7.19e-01 0.0248 0.0688 0.259 DC L1
ENSG00000093134 VNN3 647422 sc-eQTL 5.39e-02 0.164 0.0846 0.259 DC L1
ENSG00000112299 VNN1 668132 sc-eQTL 8.54e-02 -0.158 0.0915 0.259 DC L1
ENSG00000112303 VNN2 618728 sc-eQTL 4.80e-01 -0.0697 0.0985 0.259 DC L1
ENSG00000112306 RPS12 567618 sc-eQTL 8.46e-01 0.0108 0.0553 0.259 DC L1
ENSG00000118515 SGK1 -935925 sc-eQTL 1.72e-01 -0.0875 0.0638 0.259 DC L1
ENSG00000146409 SLC18B1 568848 sc-eQTL 2.20e-01 -0.107 0.0872 0.259 DC L1
ENSG00000286438 AL591115.1 279059 sc-eQTL 6.85e-01 -0.0324 0.0796 0.259 DC L1
ENSG00000286887 AL355881.1 -914114 sc-eQTL 4.40e-01 -0.0767 0.0991 0.259 DC L1
ENSG00000028839 TBPL1 -569983 sc-eQTL 6.38e-01 -0.0356 0.0757 0.256 Mono L1
ENSG00000079950 STX7 868989 sc-eQTL 9.83e-01 0.00108 0.0507 0.256 Mono L1
ENSG00000093134 VNN3 647422 sc-eQTL 5.18e-01 0.0563 0.0869 0.256 Mono L1
ENSG00000112299 VNN1 668132 sc-eQTL 5.74e-01 -0.0527 0.0935 0.256 Mono L1
ENSG00000112303 VNN2 618728 sc-eQTL 4.46e-01 -0.0504 0.066 0.256 Mono L1
ENSG00000112306 RPS12 567618 sc-eQTL 9.87e-01 -0.000636 0.0396 0.256 Mono L1
ENSG00000118515 SGK1 -935925 sc-eQTL 8.96e-01 -0.00732 0.0559 0.256 Mono L1
ENSG00000146409 SLC18B1 568848 sc-eQTL 9.97e-01 0.000279 0.0783 0.256 Mono L1
ENSG00000286887 AL355881.1 -914114 sc-eQTL 2.80e-01 -0.0831 0.0767 0.256 Mono L1
ENSG00000028839 TBPL1 -569983 sc-eQTL 8.46e-01 -0.0159 0.0819 0.258 NK L1
ENSG00000079950 STX7 868989 sc-eQTL 5.19e-01 0.0488 0.0756 0.258 NK L1
ENSG00000112303 VNN2 618728 sc-eQTL 5.21e-01 0.0605 0.0941 0.258 NK L1
ENSG00000112306 RPS12 567618 sc-eQTL 5.69e-01 -0.0222 0.039 0.258 NK L1
ENSG00000118515 SGK1 -935925 sc-eQTL 3.94e-01 -0.0615 0.072 0.258 NK L1
ENSG00000028839 TBPL1 -569983 sc-eQTL 9.78e-01 -0.00266 0.0963 0.256 Other_T L1
ENSG00000079950 STX7 868989 sc-eQTL 1.78e-01 -0.102 0.0755 0.256 Other_T L1
ENSG00000112303 VNN2 618728 sc-eQTL 7.53e-01 -0.0289 0.0917 0.256 Other_T L1
ENSG00000112306 RPS12 567618 sc-eQTL 5.42e-01 0.0222 0.0363 0.256 Other_T L1
ENSG00000118515 SGK1 -935925 sc-eQTL 3.45e-01 -0.0631 0.0668 0.256 Other_T L1
ENSG00000146409 SLC18B1 568848 sc-eQTL 7.72e-02 -0.175 0.0988 0.256 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -569983 sc-eQTL 8.19e-01 0.026 0.113 0.253 B_Activated L2
ENSG00000079931 MOXD1 980712 sc-eQTL 3.67e-01 -0.0934 0.103 0.253 B_Activated L2
ENSG00000079950 STX7 868989 sc-eQTL 5.21e-01 0.0624 0.097 0.253 B_Activated L2
ENSG00000112303 VNN2 618728 sc-eQTL 6.18e-01 -0.0515 0.103 0.253 B_Activated L2
ENSG00000112306 RPS12 567618 sc-eQTL 7.01e-02 0.0999 0.0548 0.253 B_Activated L2
ENSG00000118515 SGK1 -935925 sc-eQTL 2.84e-01 -0.106 0.0984 0.253 B_Activated L2
ENSG00000146409 SLC18B1 568848 sc-eQTL 3.98e-01 0.0819 0.0968 0.253 B_Activated L2
ENSG00000028839 TBPL1 -569983 sc-eQTL 5.33e-01 -0.0672 0.108 0.255 B_Intermediate L2
ENSG00000079931 MOXD1 980712 sc-eQTL 7.71e-01 0.0275 0.0944 0.255 B_Intermediate L2
ENSG00000079950 STX7 868989 sc-eQTL 9.02e-01 -0.0076 0.0618 0.255 B_Intermediate L2
ENSG00000112303 VNN2 618728 sc-eQTL 1.71e-01 0.127 0.0927 0.255 B_Intermediate L2
ENSG00000112306 RPS12 567618 sc-eQTL 1.80e-01 0.0764 0.0568 0.255 B_Intermediate L2
ENSG00000118515 SGK1 -935925 sc-eQTL 4.60e-01 -0.0729 0.0984 0.255 B_Intermediate L2
ENSG00000146409 SLC18B1 568848 sc-eQTL 3.40e-02 -0.217 0.102 0.255 B_Intermediate L2
ENSG00000028839 TBPL1 -569983 sc-eQTL 3.41e-02 0.219 0.102 0.256 B_Memory L2
ENSG00000079931 MOXD1 980712 sc-eQTL 1.49e-02 -0.231 0.0941 0.256 B_Memory L2
ENSG00000079950 STX7 868989 sc-eQTL 2.75e-01 0.0817 0.0747 0.256 B_Memory L2
ENSG00000112303 VNN2 618728 sc-eQTL 4.98e-01 -0.0664 0.0979 0.256 B_Memory L2
ENSG00000112306 RPS12 567618 sc-eQTL 5.94e-01 0.0252 0.0472 0.256 B_Memory L2
ENSG00000118515 SGK1 -935925 sc-eQTL 1.34e-01 -0.129 0.0861 0.256 B_Memory L2
ENSG00000146409 SLC18B1 568848 sc-eQTL 5.26e-01 -0.0625 0.0984 0.256 B_Memory L2
ENSG00000028839 TBPL1 -569983 sc-eQTL 6.71e-01 -0.0407 0.0956 0.256 B_Naive1 L2
ENSG00000079931 MOXD1 980712 sc-eQTL 9.33e-01 0.00885 0.105 0.256 B_Naive1 L2
ENSG00000079950 STX7 868989 sc-eQTL 3.70e-01 -0.0412 0.0459 0.256 B_Naive1 L2
ENSG00000112303 VNN2 618728 sc-eQTL 8.28e-01 -0.0194 0.0893 0.256 B_Naive1 L2
ENSG00000112306 RPS12 567618 sc-eQTL 6.96e-01 -0.0199 0.0508 0.256 B_Naive1 L2
ENSG00000118515 SGK1 -935925 sc-eQTL 1.26e-01 -0.121 0.0791 0.256 B_Naive1 L2
ENSG00000146409 SLC18B1 568848 sc-eQTL 9.46e-01 -0.00661 0.0981 0.256 B_Naive1 L2
ENSG00000028839 TBPL1 -569983 sc-eQTL 3.51e-01 0.097 0.104 0.258 B_Naive2 L2
ENSG00000079931 MOXD1 980712 sc-eQTL 7.60e-01 0.0309 0.101 0.258 B_Naive2 L2
ENSG00000079950 STX7 868989 sc-eQTL 9.71e-01 0.002 0.0552 0.258 B_Naive2 L2
ENSG00000112303 VNN2 618728 sc-eQTL 8.80e-01 -0.0154 0.101 0.258 B_Naive2 L2
ENSG00000112306 RPS12 567618 sc-eQTL 4.37e-01 0.0417 0.0536 0.258 B_Naive2 L2
ENSG00000118515 SGK1 -935925 sc-eQTL 6.56e-01 -0.0422 0.0947 0.258 B_Naive2 L2
ENSG00000146409 SLC18B1 568848 sc-eQTL 1.16e-01 -0.161 0.102 0.258 B_Naive2 L2
ENSG00000028839 TBPL1 -569983 sc-eQTL 2.46e-02 -0.225 0.0995 0.255 CD4_CTL L2
ENSG00000079950 STX7 868989 sc-eQTL 4.76e-01 -0.0714 0.0999 0.255 CD4_CTL L2
ENSG00000112303 VNN2 618728 sc-eQTL 4.50e-01 0.0764 0.101 0.255 CD4_CTL L2
ENSG00000112306 RPS12 567618 sc-eQTL 7.78e-01 0.0132 0.0466 0.255 CD4_CTL L2
ENSG00000118515 SGK1 -935925 sc-eQTL 3.26e-01 -0.0793 0.0807 0.255 CD4_CTL L2
ENSG00000146409 SLC18B1 568848 sc-eQTL 3.89e-01 -0.0811 0.0938 0.255 CD4_CTL L2
ENSG00000028839 TBPL1 -569983 sc-eQTL 9.27e-01 0.00743 0.0808 0.256 CD4_Naive L2
ENSG00000079950 STX7 868989 sc-eQTL 7.45e-04 -0.264 0.0771 0.256 CD4_Naive L2
ENSG00000112303 VNN2 618728 sc-eQTL 9.55e-01 0.00414 0.0734 0.256 CD4_Naive L2
ENSG00000112306 RPS12 567618 sc-eQTL 5.41e-01 -0.0291 0.0476 0.256 CD4_Naive L2
ENSG00000118515 SGK1 -935925 sc-eQTL 4.85e-02 -0.115 0.0578 0.256 CD4_Naive L2
ENSG00000146409 SLC18B1 568848 sc-eQTL 1.30e-03 -0.292 0.0895 0.256 CD4_Naive L2
ENSG00000028839 TBPL1 -569983 sc-eQTL 9.24e-01 -0.00836 0.0874 0.256 CD4_TCM L2
ENSG00000079950 STX7 868989 sc-eQTL 3.14e-01 0.0886 0.0878 0.256 CD4_TCM L2
ENSG00000112303 VNN2 618728 sc-eQTL 1.51e-01 0.124 0.0863 0.256 CD4_TCM L2
ENSG00000112306 RPS12 567618 sc-eQTL 3.21e-01 0.0446 0.0449 0.256 CD4_TCM L2
ENSG00000118515 SGK1 -935925 sc-eQTL 3.82e-01 -0.055 0.0628 0.256 CD4_TCM L2
ENSG00000146409 SLC18B1 568848 sc-eQTL 6.01e-01 -0.0546 0.104 0.256 CD4_TCM L2
ENSG00000028839 TBPL1 -569983 sc-eQTL 2.73e-01 0.112 0.102 0.256 CD4_TEM L2
ENSG00000079950 STX7 868989 sc-eQTL 9.30e-01 0.00904 0.102 0.256 CD4_TEM L2
ENSG00000112303 VNN2 618728 sc-eQTL 6.42e-01 -0.0456 0.0979 0.256 CD4_TEM L2
ENSG00000112306 RPS12 567618 sc-eQTL 6.11e-01 0.0205 0.0402 0.256 CD4_TEM L2
ENSG00000118515 SGK1 -935925 sc-eQTL 5.73e-01 -0.0389 0.069 0.256 CD4_TEM L2
ENSG00000146409 SLC18B1 568848 sc-eQTL 5.91e-01 -0.0537 0.0998 0.256 CD4_TEM L2
ENSG00000028839 TBPL1 -569983 sc-eQTL 7.73e-01 0.026 0.09 0.256 CD8_CTL L2
ENSG00000079950 STX7 868989 sc-eQTL 3.58e-01 0.0773 0.084 0.256 CD8_CTL L2
ENSG00000112303 VNN2 618728 sc-eQTL 7.30e-01 0.033 0.0956 0.256 CD8_CTL L2
ENSG00000112306 RPS12 567618 sc-eQTL 4.04e-01 -0.0427 0.0511 0.256 CD8_CTL L2
ENSG00000118515 SGK1 -935925 sc-eQTL 4.74e-01 -0.0619 0.0863 0.256 CD8_CTL L2
ENSG00000146409 SLC18B1 568848 sc-eQTL 4.42e-01 -0.0763 0.099 0.256 CD8_CTL L2
ENSG00000028839 TBPL1 -569983 sc-eQTL 4.16e-01 -0.0768 0.0944 0.256 CD8_Naive L2
ENSG00000079950 STX7 868989 sc-eQTL 5.97e-01 -0.0534 0.101 0.256 CD8_Naive L2
ENSG00000112303 VNN2 618728 sc-eQTL 4.01e-01 0.0731 0.0868 0.256 CD8_Naive L2
ENSG00000112306 RPS12 567618 sc-eQTL 8.81e-01 0.00745 0.0497 0.256 CD8_Naive L2
ENSG00000118515 SGK1 -935925 sc-eQTL 5.74e-01 -0.0351 0.0624 0.256 CD8_Naive L2
ENSG00000146409 SLC18B1 568848 sc-eQTL 4.13e-02 -0.203 0.0988 0.256 CD8_Naive L2
ENSG00000028839 TBPL1 -569983 sc-eQTL 8.24e-01 -0.0241 0.108 0.257 CD8_TCM L2
ENSG00000079950 STX7 868989 sc-eQTL 8.28e-01 0.0218 0.1 0.257 CD8_TCM L2
ENSG00000112303 VNN2 618728 sc-eQTL 8.11e-01 0.0238 0.0994 0.257 CD8_TCM L2
ENSG00000112306 RPS12 567618 sc-eQTL 9.08e-01 0.00564 0.0485 0.257 CD8_TCM L2
ENSG00000118515 SGK1 -935925 sc-eQTL 6.65e-02 -0.147 0.0795 0.257 CD8_TCM L2
ENSG00000146409 SLC18B1 568848 sc-eQTL 9.61e-01 0.00515 0.106 0.257 CD8_TCM L2
ENSG00000028839 TBPL1 -569983 sc-eQTL 9.36e-01 -0.00788 0.0974 0.249 CD8_TEM L2
ENSG00000079950 STX7 868989 sc-eQTL 5.42e-01 -0.0649 0.106 0.249 CD8_TEM L2
ENSG00000112303 VNN2 618728 sc-eQTL 8.57e-01 -0.0191 0.106 0.249 CD8_TEM L2
ENSG00000112306 RPS12 567618 sc-eQTL 2.47e-01 -0.0657 0.0567 0.249 CD8_TEM L2
ENSG00000118515 SGK1 -935925 sc-eQTL 3.06e-01 0.0953 0.0929 0.249 CD8_TEM L2
ENSG00000146409 SLC18B1 568848 sc-eQTL 7.26e-01 -0.0377 0.107 0.249 CD8_TEM L2
ENSG00000028839 TBPL1 -569983 sc-eQTL 2.38e-02 -0.228 0.0999 0.258 MAIT L2
ENSG00000079950 STX7 868989 sc-eQTL 4.29e-02 -0.194 0.0952 0.258 MAIT L2
ENSG00000112303 VNN2 618728 sc-eQTL 4.57e-01 -0.0728 0.0976 0.258 MAIT L2
ENSG00000112306 RPS12 567618 sc-eQTL 9.38e-02 0.0804 0.0478 0.258 MAIT L2
ENSG00000118515 SGK1 -935925 sc-eQTL 6.46e-01 -0.0312 0.0676 0.258 MAIT L2
ENSG00000146409 SLC18B1 568848 sc-eQTL 2.07e-01 -0.127 0.1 0.258 MAIT L2
ENSG00000028839 TBPL1 -569983 sc-eQTL 9.86e-01 0.00194 0.108 0.26 NK_CD56bright L2
ENSG00000079950 STX7 868989 sc-eQTL 9.89e-01 -0.00139 0.0998 0.26 NK_CD56bright L2
ENSG00000112303 VNN2 618728 sc-eQTL 3.00e-01 -0.105 0.101 0.26 NK_CD56bright L2
ENSG00000112306 RPS12 567618 sc-eQTL 9.08e-01 0.00653 0.0565 0.26 NK_CD56bright L2
ENSG00000118515 SGK1 -935925 sc-eQTL 8.75e-01 -0.0133 0.0844 0.26 NK_CD56bright L2
ENSG00000028839 TBPL1 -569983 sc-eQTL 2.75e-01 -0.0962 0.0879 0.256 NK_CD56dim L2
ENSG00000079950 STX7 868989 sc-eQTL 7.78e-01 -0.0228 0.0807 0.256 NK_CD56dim L2
ENSG00000112303 VNN2 618728 sc-eQTL 4.44e-01 0.0772 0.101 0.256 NK_CD56dim L2
ENSG00000112306 RPS12 567618 sc-eQTL 2.42e-01 -0.0469 0.0399 0.256 NK_CD56dim L2
ENSG00000118515 SGK1 -935925 sc-eQTL 2.28e-01 -0.107 0.0884 0.256 NK_CD56dim L2
ENSG00000028839 TBPL1 -569983 sc-eQTL 7.88e-01 -0.0298 0.111 0.251 NK_HLA L2
ENSG00000079950 STX7 868989 sc-eQTL 5.12e-01 0.0663 0.101 0.251 NK_HLA L2
ENSG00000112303 VNN2 618728 sc-eQTL 9.70e-01 -0.00387 0.102 0.251 NK_HLA L2
ENSG00000112306 RPS12 567618 sc-eQTL 9.40e-01 -0.00359 0.0476 0.251 NK_HLA L2
ENSG00000118515 SGK1 -935925 sc-eQTL 8.39e-01 0.0192 0.0941 0.251 NK_HLA L2
ENSG00000028839 TBPL1 -569983 sc-eQTL 5.25e-01 0.058 0.091 0.256 NK_cytokine L2
ENSG00000079950 STX7 868989 sc-eQTL 9.45e-01 0.00604 0.0882 0.256 NK_cytokine L2
ENSG00000112303 VNN2 618728 sc-eQTL 3.19e-01 0.0989 0.0989 0.256 NK_cytokine L2
ENSG00000112306 RPS12 567618 sc-eQTL 5.36e-01 -0.0333 0.0537 0.256 NK_cytokine L2
ENSG00000118515 SGK1 -935925 sc-eQTL 1.04e-01 -0.145 0.089 0.256 NK_cytokine L2
ENSG00000028839 TBPL1 -569983 sc-eQTL 1.58e-02 -0.315 0.129 0.252 PB L2
ENSG00000079931 MOXD1 980712 sc-eQTL 8.53e-01 -0.0209 0.113 0.252 PB L2
ENSG00000079950 STX7 868989 sc-eQTL 1.77e-02 0.221 0.0917 0.252 PB L2
ENSG00000112303 VNN2 618728 sc-eQTL 1.31e-01 0.173 0.114 0.252 PB L2
ENSG00000112306 RPS12 567618 sc-eQTL 1.95e-01 0.0845 0.0647 0.252 PB L2
ENSG00000118515 SGK1 -935925 sc-eQTL 1.88e-02 -0.245 0.103 0.252 PB L2
ENSG00000146409 SLC18B1 568848 sc-eQTL 3.91e-01 0.105 0.122 0.252 PB L2
ENSG00000028839 TBPL1 -569983 sc-eQTL 9.68e-01 -0.00405 0.102 0.257 Pro_T L2
ENSG00000079950 STX7 868989 sc-eQTL 7.41e-01 0.03 0.0907 0.257 Pro_T L2
ENSG00000112303 VNN2 618728 sc-eQTL 9.69e-01 -0.00376 0.0973 0.257 Pro_T L2
ENSG00000112306 RPS12 567618 sc-eQTL 2.08e-01 -0.0463 0.0367 0.257 Pro_T L2
ENSG00000118515 SGK1 -935925 sc-eQTL 5.67e-01 0.0422 0.0737 0.257 Pro_T L2
ENSG00000146409 SLC18B1 568848 sc-eQTL 5.71e-01 0.054 0.0952 0.257 Pro_T L2
ENSG00000028839 TBPL1 -569983 sc-eQTL 4.68e-01 0.0756 0.104 0.256 Treg L2
ENSG00000079950 STX7 868989 sc-eQTL 2.39e-02 -0.221 0.097 0.256 Treg L2
ENSG00000112303 VNN2 618728 sc-eQTL 5.04e-01 -0.0552 0.0825 0.256 Treg L2
ENSG00000112306 RPS12 567618 sc-eQTL 3.89e-01 0.0315 0.0365 0.256 Treg L2
ENSG00000118515 SGK1 -935925 sc-eQTL 3.99e-01 0.065 0.0768 0.256 Treg L2
ENSG00000146409 SLC18B1 568848 sc-eQTL 3.29e-02 -0.219 0.102 0.256 Treg L2
ENSG00000028839 TBPL1 -569983 sc-eQTL 2.44e-01 -0.13 0.111 0.249 cDC L2
ENSG00000079950 STX7 868989 sc-eQTL 7.38e-01 0.0293 0.0875 0.249 cDC L2
ENSG00000093134 VNN3 647422 sc-eQTL 6.45e-02 0.16 0.0861 0.249 cDC L2
ENSG00000112299 VNN1 668132 sc-eQTL 3.08e-01 -0.104 0.102 0.249 cDC L2
ENSG00000112303 VNN2 618728 sc-eQTL 2.45e-01 0.116 0.0992 0.249 cDC L2
ENSG00000112306 RPS12 567618 sc-eQTL 2.08e-01 0.0618 0.0489 0.249 cDC L2
ENSG00000118515 SGK1 -935925 sc-eQTL 4.21e-02 -0.168 0.0819 0.249 cDC L2
ENSG00000146409 SLC18B1 568848 sc-eQTL 5.36e-01 -0.0602 0.0972 0.249 cDC L2
ENSG00000286438 AL591115.1 279059 sc-eQTL 8.52e-01 -0.0145 0.0778 0.249 cDC L2
ENSG00000286887 AL355881.1 -914114 sc-eQTL 2.00e-02 -0.221 0.0943 0.249 cDC L2
ENSG00000028839 TBPL1 -569983 sc-eQTL 5.49e-01 -0.0514 0.0857 0.256 cMono_IL1B L2
ENSG00000079950 STX7 868989 sc-eQTL 7.46e-01 0.0211 0.0651 0.256 cMono_IL1B L2
ENSG00000093134 VNN3 647422 sc-eQTL 8.97e-01 -0.012 0.092 0.256 cMono_IL1B L2
ENSG00000112299 VNN1 668132 sc-eQTL 7.17e-01 -0.0337 0.0928 0.256 cMono_IL1B L2
ENSG00000112303 VNN2 618728 sc-eQTL 9.01e-01 -0.00921 0.0742 0.256 cMono_IL1B L2
ENSG00000112306 RPS12 567618 sc-eQTL 6.22e-01 -0.0204 0.0412 0.256 cMono_IL1B L2
ENSG00000118515 SGK1 -935925 sc-eQTL 7.04e-01 -0.0234 0.0614 0.256 cMono_IL1B L2
ENSG00000146409 SLC18B1 568848 sc-eQTL 1.90e-01 -0.104 0.0792 0.256 cMono_IL1B L2
ENSG00000286887 AL355881.1 -914114 sc-eQTL 2.08e-01 -0.104 0.0825 0.256 cMono_IL1B L2
ENSG00000028839 TBPL1 -569983 sc-eQTL 3.64e-01 -0.0893 0.0982 0.256 cMono_S100A L2
ENSG00000079950 STX7 868989 sc-eQTL 9.19e-01 0.00725 0.0711 0.256 cMono_S100A L2
ENSG00000093134 VNN3 647422 sc-eQTL 3.05e-01 0.091 0.0886 0.256 cMono_S100A L2
ENSG00000112299 VNN1 668132 sc-eQTL 8.36e-01 -0.02 0.0964 0.256 cMono_S100A L2
ENSG00000112303 VNN2 618728 sc-eQTL 2.50e-01 -0.0726 0.063 0.256 cMono_S100A L2
ENSG00000112306 RPS12 567618 sc-eQTL 6.14e-01 -0.023 0.0454 0.256 cMono_S100A L2
ENSG00000118515 SGK1 -935925 sc-eQTL 4.07e-01 -0.0432 0.0519 0.256 cMono_S100A L2
ENSG00000146409 SLC18B1 568848 sc-eQTL 2.75e-01 0.0918 0.0839 0.256 cMono_S100A L2
ENSG00000286887 AL355881.1 -914114 sc-eQTL 4.50e-01 -0.0623 0.0822 0.256 cMono_S100A L2
ENSG00000028839 TBPL1 -569983 sc-eQTL 8.32e-01 0.0286 0.135 0.248 gdT L2
ENSG00000079950 STX7 868989 sc-eQTL 8.46e-01 -0.0225 0.116 0.248 gdT L2
ENSG00000112303 VNN2 618728 sc-eQTL 2.22e-01 -0.156 0.127 0.248 gdT L2
ENSG00000112306 RPS12 567618 sc-eQTL 1.07e-01 -0.0783 0.0483 0.248 gdT L2
ENSG00000118515 SGK1 -935925 sc-eQTL 9.82e-01 -0.00206 0.0921 0.248 gdT L2
ENSG00000146409 SLC18B1 568848 sc-eQTL 6.31e-01 -0.0607 0.126 0.248 gdT L2
ENSG00000028839 TBPL1 -569983 sc-eQTL 7.81e-01 -0.0283 0.102 0.253 intMono L2
ENSG00000079950 STX7 868989 sc-eQTL 4.91e-02 0.19 0.0962 0.253 intMono L2
ENSG00000093134 VNN3 647422 sc-eQTL 2.54e-02 0.218 0.0968 0.253 intMono L2
ENSG00000112299 VNN1 668132 sc-eQTL 6.58e-01 0.043 0.0969 0.253 intMono L2
ENSG00000112303 VNN2 618728 sc-eQTL 7.31e-01 -0.0339 0.0985 0.253 intMono L2
ENSG00000112306 RPS12 567618 sc-eQTL 8.24e-01 -0.00954 0.0429 0.253 intMono L2
ENSG00000118515 SGK1 -935925 sc-eQTL 6.48e-01 0.0329 0.072 0.253 intMono L2
ENSG00000146409 SLC18B1 568848 sc-eQTL 5.20e-02 -0.202 0.103 0.253 intMono L2
ENSG00000286887 AL355881.1 -914114 sc-eQTL 7.30e-01 0.0345 0.0998 0.253 intMono L2
ENSG00000028839 TBPL1 -569983 sc-eQTL 3.13e-01 0.106 0.105 0.251 ncMono L2
ENSG00000079950 STX7 868989 sc-eQTL 2.15e-01 -0.088 0.0708 0.251 ncMono L2
ENSG00000093134 VNN3 647422 sc-eQTL 7.49e-01 -0.0321 0.1 0.251 ncMono L2
ENSG00000112299 VNN1 668132 sc-eQTL 3.58e-02 -0.208 0.0984 0.251 ncMono L2
ENSG00000112303 VNN2 618728 sc-eQTL 6.45e-01 -0.0442 0.0957 0.251 ncMono L2
ENSG00000112306 RPS12 567618 sc-eQTL 3.22e-01 0.0475 0.0479 0.251 ncMono L2
ENSG00000118515 SGK1 -935925 sc-eQTL 8.16e-01 0.0158 0.0679 0.251 ncMono L2
ENSG00000146409 SLC18B1 568848 sc-eQTL 6.80e-03 0.228 0.0832 0.251 ncMono L2
ENSG00000286887 AL355881.1 -914114 sc-eQTL 5.55e-01 -0.053 0.0896 0.251 ncMono L2
ENSG00000028839 TBPL1 -569983 sc-eQTL 5.63e-01 0.0717 0.124 0.249 pDC L2
ENSG00000079950 STX7 868989 sc-eQTL 3.46e-01 0.0778 0.0823 0.249 pDC L2
ENSG00000093134 VNN3 647422 sc-eQTL 5.28e-01 0.0525 0.083 0.249 pDC L2
ENSG00000112299 VNN1 668132 sc-eQTL 3.81e-02 -0.174 0.0834 0.249 pDC L2
ENSG00000112303 VNN2 618728 sc-eQTL 2.90e-01 -0.107 0.1 0.249 pDC L2
ENSG00000112306 RPS12 567618 sc-eQTL 4.30e-01 -0.0548 0.0692 0.249 pDC L2
ENSG00000118515 SGK1 -935925 sc-eQTL 9.80e-01 0.00176 0.0704 0.249 pDC L2
ENSG00000146409 SLC18B1 568848 sc-eQTL 4.90e-01 -0.0708 0.102 0.249 pDC L2
ENSG00000286438 AL591115.1 279059 sc-eQTL 6.83e-01 0.0401 0.0981 0.249 pDC L2
ENSG00000286887 AL355881.1 -914114 sc-eQTL 6.92e-01 0.0345 0.087 0.249 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -569983 sc-eQTL 4.61e-01 0.0763 0.103 0.256 B_Memory LOneK1K
ENSG00000079931 MOXD1 980712 sc-eQTL 3.60e-01 -0.0922 0.1 0.256 B_Memory LOneK1K
ENSG00000079950 STX7 868989 sc-eQTL 3.50e-01 0.0533 0.0569 0.256 B_Memory LOneK1K
ENSG00000112303 VNN2 618728 sc-eQTL 6.48e-01 0.0413 0.0902 0.256 B_Memory LOneK1K
ENSG00000112306 RPS12 567618 sc-eQTL 4.37e-01 0.0399 0.0513 0.256 B_Memory LOneK1K
ENSG00000118515 SGK1 -935925 sc-eQTL 1.66e-01 -0.111 0.08 0.256 B_Memory LOneK1K
ENSG00000146409 SLC18B1 568848 sc-eQTL 1.11e-01 -0.15 0.0938 0.256 B_Memory LOneK1K
ENSG00000028839 TBPL1 -569983 sc-eQTL 8.43e-01 -0.0191 0.0961 0.256 B_Naive LOneK1K
ENSG00000079931 MOXD1 980712 sc-eQTL 3.74e-01 0.0939 0.105 0.256 B_Naive LOneK1K
ENSG00000079950 STX7 868989 sc-eQTL 4.98e-01 -0.0294 0.0433 0.256 B_Naive LOneK1K
ENSG00000112303 VNN2 618728 sc-eQTL 9.00e-01 -0.0106 0.0841 0.256 B_Naive LOneK1K
ENSG00000112306 RPS12 567618 sc-eQTL 9.80e-01 -0.00127 0.0509 0.256 B_Naive LOneK1K
ENSG00000118515 SGK1 -935925 sc-eQTL 1.48e-01 -0.114 0.0784 0.256 B_Naive LOneK1K
ENSG00000146409 SLC18B1 568848 sc-eQTL 2.17e-01 -0.118 0.0957 0.256 B_Naive LOneK1K
ENSG00000028839 TBPL1 -569983 sc-eQTL 3.77e-01 -0.0694 0.0784 0.256 CD14_Mono LOneK1K
ENSG00000079950 STX7 868989 sc-eQTL 9.14e-01 0.00588 0.0547 0.256 CD14_Mono LOneK1K
ENSG00000093134 VNN3 647422 sc-eQTL 7.60e-01 0.0273 0.0891 0.256 CD14_Mono LOneK1K
ENSG00000112299 VNN1 668132 sc-eQTL 7.24e-01 -0.0329 0.0929 0.256 CD14_Mono LOneK1K
ENSG00000112303 VNN2 618728 sc-eQTL 4.51e-01 -0.0463 0.0614 0.256 CD14_Mono LOneK1K
ENSG00000112306 RPS12 567618 sc-eQTL 5.46e-01 -0.0254 0.0421 0.256 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -935925 sc-eQTL 6.36e-01 -0.0272 0.0574 0.256 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 568848 sc-eQTL 5.92e-01 -0.0402 0.0749 0.256 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -914114 sc-eQTL 2.16e-01 -0.0972 0.0783 0.256 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -569983 sc-eQTL 4.65e-01 0.0743 0.102 0.256 CD16_Mono LOneK1K
ENSG00000079950 STX7 868989 sc-eQTL 7.26e-01 0.0235 0.0671 0.256 CD16_Mono LOneK1K
ENSG00000093134 VNN3 647422 sc-eQTL 6.68e-02 0.18 0.0979 0.256 CD16_Mono LOneK1K
ENSG00000112299 VNN1 668132 sc-eQTL 1.40e-01 -0.144 0.0973 0.256 CD16_Mono LOneK1K
ENSG00000112303 VNN2 618728 sc-eQTL 4.84e-01 -0.0646 0.0921 0.256 CD16_Mono LOneK1K
ENSG00000112306 RPS12 567618 sc-eQTL 4.50e-01 0.0296 0.0391 0.256 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -935925 sc-eQTL 9.65e-01 0.00263 0.0592 0.256 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 568848 sc-eQTL 4.79e-01 -0.0673 0.0949 0.256 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -914114 sc-eQTL 6.87e-01 -0.0347 0.0858 0.256 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -569983 sc-eQTL 6.29e-01 -0.0393 0.081 0.256 NK_CD56dim LOneK1K
ENSG00000079950 STX7 868989 sc-eQTL 4.93e-01 0.0522 0.0761 0.256 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 618728 sc-eQTL 2.67e-01 0.107 0.0961 0.256 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 567618 sc-eQTL 5.41e-01 -0.0241 0.0393 0.256 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -935925 sc-eQTL 5.55e-02 -0.155 0.0806 0.256 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079950 STX7 868989 eQTL 0.0178 -0.0426 0.018 0.0 0.0 0.246
ENSG00000093134 VNN3 647422 eQTL 0.00825 -0.0436 0.0165 0.0 0.0 0.246
ENSG00000112299 VNN1 668132 pQTL 0.0418 0.0827 0.0406 0.0 0.0 0.245
ENSG00000112303 VNN2 618728 pQTL 0.0217 -0.0672 0.0292 0.0 0.0 0.245
ENSG00000146409 SLC18B1 568848 eQTL 0.0387 -0.0522 0.0252 0.0 0.0 0.246

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000146409 SLC18B1 568848 2.95e-07 1.78e-07 7.87e-08 2.35e-07 9.24e-08 8.33e-08 1.9e-07 5.4e-08 1.45e-07 5.42e-08 1.59e-07 9e-08 2.13e-07 8.13e-08 5.69e-08 7.23e-08 4.45e-08 1.4e-07 7.29e-08 4.89e-08 1.13e-07 1.47e-07 1.68e-07 2.83e-08 2.02e-07 1.14e-07 1.12e-07 1.26e-07 1.26e-07 1.06e-07 1.08e-07 3.94e-08 3.61e-08 9.98e-08 6.98e-08 3.22e-08 4.06e-08 9.23e-08 6.71e-08 8.2e-08 3.59e-08 1.55e-07 4.17e-08 1.07e-08 4.7e-08 8.07e-09 1.21e-07 3.79e-09 4.91e-08