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Genes within 1Mb (chr6:133381728:T:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -570442 sc-eQTL 2.77e-01 -0.176 0.161 0.921 B L1
ENSG00000079931 MOXD1 980253 sc-eQTL 1.78e-01 0.23 0.17 0.921 B L1
ENSG00000079950 STX7 868530 sc-eQTL 2.98e-02 0.139 0.0637 0.921 B L1
ENSG00000112303 VNN2 618269 sc-eQTL 1.26e-01 -0.185 0.121 0.921 B L1
ENSG00000112306 RPS12 567159 sc-eQTL 2.34e-01 0.0872 0.073 0.921 B L1
ENSG00000118515 SGK1 -936384 sc-eQTL 5.94e-02 -0.212 0.112 0.921 B L1
ENSG00000146409 SLC18B1 568389 sc-eQTL 8.41e-01 -0.031 0.154 0.921 B L1
ENSG00000028839 TBPL1 -570442 sc-eQTL 2.90e-01 -0.126 0.119 0.921 CD4T L1
ENSG00000079950 STX7 868530 sc-eQTL 2.75e-01 -0.136 0.124 0.921 CD4T L1
ENSG00000112303 VNN2 618269 sc-eQTL 7.37e-01 -0.0362 0.107 0.921 CD4T L1
ENSG00000112306 RPS12 567159 sc-eQTL 7.19e-01 0.0264 0.0731 0.921 CD4T L1
ENSG00000118515 SGK1 -936384 sc-eQTL 9.34e-01 -0.00816 0.0982 0.921 CD4T L1
ENSG00000146409 SLC18B1 568389 sc-eQTL 9.57e-02 -0.246 0.147 0.921 CD4T L1
ENSG00000028839 TBPL1 -570442 sc-eQTL 1.73e-02 -0.282 0.118 0.921 CD8T L1
ENSG00000079950 STX7 868530 sc-eQTL 1.08e-01 -0.2 0.124 0.921 CD8T L1
ENSG00000112303 VNN2 618269 sc-eQTL 3.55e-02 -0.304 0.144 0.921 CD8T L1
ENSG00000112306 RPS12 567159 sc-eQTL 6.93e-01 0.0196 0.0496 0.921 CD8T L1
ENSG00000118515 SGK1 -936384 sc-eQTL 6.27e-01 -0.0372 0.0764 0.921 CD8T L1
ENSG00000146409 SLC18B1 568389 sc-eQTL 5.77e-01 -0.0838 0.15 0.921 CD8T L1
ENSG00000028839 TBPL1 -570442 sc-eQTL 7.16e-01 0.0653 0.18 0.919 DC L1
ENSG00000079950 STX7 868530 sc-eQTL 3.56e-01 -0.103 0.111 0.919 DC L1
ENSG00000093134 VNN3 646963 sc-eQTL 2.87e-01 -0.147 0.138 0.919 DC L1
ENSG00000112299 VNN1 667673 sc-eQTL 2.95e-01 -0.156 0.149 0.919 DC L1
ENSG00000112303 VNN2 618269 sc-eQTL 2.35e-01 -0.19 0.159 0.919 DC L1
ENSG00000112306 RPS12 567159 sc-eQTL 2.86e-01 -0.0956 0.0893 0.919 DC L1
ENSG00000118515 SGK1 -936384 sc-eQTL 7.43e-02 -0.185 0.103 0.919 DC L1
ENSG00000146409 SLC18B1 568389 sc-eQTL 3.50e-01 -0.133 0.141 0.919 DC L1
ENSG00000286438 AL591115.1 278600 sc-eQTL 2.18e-01 -0.159 0.129 0.919 DC L1
ENSG00000286887 AL355881.1 -914573 sc-eQTL 2.38e-01 -0.19 0.16 0.919 DC L1
ENSG00000028839 TBPL1 -570442 sc-eQTL 6.16e-01 -0.0631 0.126 0.921 Mono L1
ENSG00000079950 STX7 868530 sc-eQTL 3.32e-01 0.0816 0.084 0.921 Mono L1
ENSG00000093134 VNN3 646963 sc-eQTL 9.05e-01 -0.0173 0.144 0.921 Mono L1
ENSG00000112299 VNN1 667673 sc-eQTL 8.30e-01 0.0335 0.155 0.921 Mono L1
ENSG00000112303 VNN2 618269 sc-eQTL 8.85e-03 -0.285 0.108 0.921 Mono L1
ENSG00000112306 RPS12 567159 sc-eQTL 5.42e-01 -0.0401 0.0657 0.921 Mono L1
ENSG00000118515 SGK1 -936384 sc-eQTL 2.13e-01 -0.116 0.0925 0.921 Mono L1
ENSG00000146409 SLC18B1 568389 sc-eQTL 4.27e-01 -0.103 0.13 0.921 Mono L1
ENSG00000286887 AL355881.1 -914573 sc-eQTL 3.30e-02 -0.271 0.126 0.921 Mono L1
ENSG00000028839 TBPL1 -570442 sc-eQTL 8.11e-01 0.0334 0.14 0.921 NK L1
ENSG00000079950 STX7 868530 sc-eQTL 1.88e-01 0.17 0.129 0.921 NK L1
ENSG00000112303 VNN2 618269 sc-eQTL 1.00e+00 7.55e-05 0.161 0.921 NK L1
ENSG00000112306 RPS12 567159 sc-eQTL 7.21e-01 0.0238 0.0666 0.921 NK L1
ENSG00000118515 SGK1 -936384 sc-eQTL 7.89e-01 0.033 0.123 0.921 NK L1
ENSG00000028839 TBPL1 -570442 sc-eQTL 3.12e-01 0.165 0.162 0.921 Other_T L1
ENSG00000079950 STX7 868530 sc-eQTL 4.76e-01 -0.0914 0.128 0.921 Other_T L1
ENSG00000112303 VNN2 618269 sc-eQTL 1.68e-01 -0.214 0.154 0.921 Other_T L1
ENSG00000112306 RPS12 567159 sc-eQTL 9.53e-01 -0.00363 0.0614 0.921 Other_T L1
ENSG00000118515 SGK1 -936384 sc-eQTL 9.91e-01 -0.00128 0.113 0.921 Other_T L1
ENSG00000146409 SLC18B1 568389 sc-eQTL 3.30e-02 -0.357 0.166 0.921 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -570442 sc-eQTL 3.93e-01 0.169 0.198 0.926 B_Activated L2
ENSG00000079931 MOXD1 980253 sc-eQTL 4.57e-01 0.135 0.181 0.926 B_Activated L2
ENSG00000079950 STX7 868530 sc-eQTL 4.51e-01 0.128 0.17 0.926 B_Activated L2
ENSG00000112303 VNN2 618269 sc-eQTL 9.40e-01 0.0136 0.181 0.926 B_Activated L2
ENSG00000112306 RPS12 567159 sc-eQTL 9.58e-01 0.0051 0.0969 0.926 B_Activated L2
ENSG00000118515 SGK1 -936384 sc-eQTL 7.79e-01 0.0486 0.173 0.926 B_Activated L2
ENSG00000146409 SLC18B1 568389 sc-eQTL 8.69e-01 0.0281 0.17 0.926 B_Activated L2
ENSG00000028839 TBPL1 -570442 sc-eQTL 1.58e-01 0.255 0.18 0.921 B_Intermediate L2
ENSG00000079931 MOXD1 980253 sc-eQTL 6.65e-01 -0.0686 0.158 0.921 B_Intermediate L2
ENSG00000079950 STX7 868530 sc-eQTL 3.00e-01 0.107 0.103 0.921 B_Intermediate L2
ENSG00000112303 VNN2 618269 sc-eQTL 6.88e-01 0.0627 0.156 0.921 B_Intermediate L2
ENSG00000112306 RPS12 567159 sc-eQTL 1.52e-02 0.231 0.0943 0.921 B_Intermediate L2
ENSG00000118515 SGK1 -936384 sc-eQTL 3.45e-02 -0.348 0.164 0.921 B_Intermediate L2
ENSG00000146409 SLC18B1 568389 sc-eQTL 9.37e-01 0.0137 0.172 0.921 B_Intermediate L2
ENSG00000028839 TBPL1 -570442 sc-eQTL 5.55e-01 -0.103 0.174 0.92 B_Memory L2
ENSG00000079931 MOXD1 980253 sc-eQTL 5.59e-01 -0.0938 0.16 0.92 B_Memory L2
ENSG00000079950 STX7 868530 sc-eQTL 4.91e-05 0.502 0.121 0.92 B_Memory L2
ENSG00000112303 VNN2 618269 sc-eQTL 1.57e-01 -0.233 0.164 0.92 B_Memory L2
ENSG00000112306 RPS12 567159 sc-eQTL 8.94e-01 0.0106 0.0794 0.92 B_Memory L2
ENSG00000118515 SGK1 -936384 sc-eQTL 4.67e-01 -0.106 0.145 0.92 B_Memory L2
ENSG00000146409 SLC18B1 568389 sc-eQTL 5.96e-01 0.0878 0.165 0.92 B_Memory L2
ENSG00000028839 TBPL1 -570442 sc-eQTL 1.14e-01 -0.254 0.16 0.921 B_Naive1 L2
ENSG00000079931 MOXD1 980253 sc-eQTL 5.31e-01 0.111 0.177 0.921 B_Naive1 L2
ENSG00000079950 STX7 868530 sc-eQTL 2.96e-02 0.168 0.0765 0.921 B_Naive1 L2
ENSG00000112303 VNN2 618269 sc-eQTL 3.52e-02 -0.315 0.149 0.921 B_Naive1 L2
ENSG00000112306 RPS12 567159 sc-eQTL 1.04e-01 0.139 0.085 0.921 B_Naive1 L2
ENSG00000118515 SGK1 -936384 sc-eQTL 8.89e-01 -0.0186 0.134 0.921 B_Naive1 L2
ENSG00000146409 SLC18B1 568389 sc-eQTL 9.56e-01 -0.00918 0.165 0.921 B_Naive1 L2
ENSG00000028839 TBPL1 -570442 sc-eQTL 9.88e-02 -0.288 0.174 0.921 B_Naive2 L2
ENSG00000079931 MOXD1 980253 sc-eQTL 7.58e-01 0.0526 0.17 0.921 B_Naive2 L2
ENSG00000079950 STX7 868530 sc-eQTL 1.70e-01 0.127 0.0924 0.921 B_Naive2 L2
ENSG00000112303 VNN2 618269 sc-eQTL 9.21e-01 0.017 0.17 0.921 B_Naive2 L2
ENSG00000112306 RPS12 567159 sc-eQTL 4.81e-02 0.178 0.0894 0.921 B_Naive2 L2
ENSG00000118515 SGK1 -936384 sc-eQTL 7.54e-01 0.05 0.159 0.921 B_Naive2 L2
ENSG00000146409 SLC18B1 568389 sc-eQTL 1.19e-01 -0.268 0.171 0.921 B_Naive2 L2
ENSG00000028839 TBPL1 -570442 sc-eQTL 5.99e-01 -0.0883 0.168 0.918 CD4_CTL L2
ENSG00000079950 STX7 868530 sc-eQTL 7.59e-01 -0.0513 0.167 0.918 CD4_CTL L2
ENSG00000112303 VNN2 618269 sc-eQTL 7.79e-01 -0.0473 0.168 0.918 CD4_CTL L2
ENSG00000112306 RPS12 567159 sc-eQTL 7.37e-01 0.0262 0.0777 0.918 CD4_CTL L2
ENSG00000118515 SGK1 -936384 sc-eQTL 9.10e-01 -0.0153 0.135 0.918 CD4_CTL L2
ENSG00000146409 SLC18B1 568389 sc-eQTL 6.19e-01 -0.078 0.157 0.918 CD4_CTL L2
ENSG00000028839 TBPL1 -570442 sc-eQTL 9.36e-02 -0.228 0.135 0.921 CD4_Naive L2
ENSG00000079950 STX7 868530 sc-eQTL 2.04e-01 -0.17 0.133 0.921 CD4_Naive L2
ENSG00000112303 VNN2 618269 sc-eQTL 4.27e-01 -0.0983 0.124 0.921 CD4_Naive L2
ENSG00000112306 RPS12 567159 sc-eQTL 9.03e-01 0.00981 0.0803 0.921 CD4_Naive L2
ENSG00000118515 SGK1 -936384 sc-eQTL 7.60e-01 -0.0301 0.0982 0.921 CD4_Naive L2
ENSG00000146409 SLC18B1 568389 sc-eQTL 4.76e-02 -0.305 0.153 0.921 CD4_Naive L2
ENSG00000028839 TBPL1 -570442 sc-eQTL 7.22e-01 -0.052 0.146 0.921 CD4_TCM L2
ENSG00000079950 STX7 868530 sc-eQTL 6.61e-01 -0.0647 0.147 0.921 CD4_TCM L2
ENSG00000112303 VNN2 618269 sc-eQTL 9.14e-01 0.0156 0.145 0.921 CD4_TCM L2
ENSG00000112306 RPS12 567159 sc-eQTL 4.25e-01 0.0602 0.0752 0.921 CD4_TCM L2
ENSG00000118515 SGK1 -936384 sc-eQTL 9.47e-01 -0.00703 0.105 0.921 CD4_TCM L2
ENSG00000146409 SLC18B1 568389 sc-eQTL 2.45e-01 -0.203 0.174 0.921 CD4_TCM L2
ENSG00000028839 TBPL1 -570442 sc-eQTL 3.29e-01 0.166 0.17 0.921 CD4_TEM L2
ENSG00000079950 STX7 868530 sc-eQTL 1.85e-01 -0.226 0.17 0.921 CD4_TEM L2
ENSG00000112303 VNN2 618269 sc-eQTL 2.64e-01 -0.183 0.163 0.921 CD4_TEM L2
ENSG00000112306 RPS12 567159 sc-eQTL 9.14e-01 0.00722 0.0672 0.921 CD4_TEM L2
ENSG00000118515 SGK1 -936384 sc-eQTL 6.28e-01 0.056 0.115 0.921 CD4_TEM L2
ENSG00000146409 SLC18B1 568389 sc-eQTL 7.42e-01 0.055 0.167 0.921 CD4_TEM L2
ENSG00000028839 TBPL1 -570442 sc-eQTL 6.38e-01 -0.0709 0.15 0.921 CD8_CTL L2
ENSG00000079950 STX7 868530 sc-eQTL 7.26e-01 -0.0493 0.141 0.921 CD8_CTL L2
ENSG00000112303 VNN2 618269 sc-eQTL 2.29e-01 -0.192 0.159 0.921 CD8_CTL L2
ENSG00000112306 RPS12 567159 sc-eQTL 9.99e-01 -0.000157 0.0855 0.921 CD8_CTL L2
ENSG00000118515 SGK1 -936384 sc-eQTL 4.58e-01 0.107 0.144 0.921 CD8_CTL L2
ENSG00000146409 SLC18B1 568389 sc-eQTL 3.32e-02 -0.351 0.164 0.921 CD8_CTL L2
ENSG00000028839 TBPL1 -570442 sc-eQTL 2.59e-02 -0.354 0.158 0.921 CD8_Naive L2
ENSG00000079950 STX7 868530 sc-eQTL 1.53e-01 -0.243 0.169 0.921 CD8_Naive L2
ENSG00000112303 VNN2 618269 sc-eQTL 1.32e-01 -0.221 0.146 0.921 CD8_Naive L2
ENSG00000112306 RPS12 567159 sc-eQTL 8.44e-02 0.145 0.0835 0.921 CD8_Naive L2
ENSG00000118515 SGK1 -936384 sc-eQTL 9.26e-01 -0.00981 0.106 0.921 CD8_Naive L2
ENSG00000146409 SLC18B1 568389 sc-eQTL 6.84e-01 -0.0687 0.169 0.921 CD8_Naive L2
ENSG00000028839 TBPL1 -570442 sc-eQTL 7.14e-02 -0.327 0.181 0.921 CD8_TCM L2
ENSG00000079950 STX7 868530 sc-eQTL 8.96e-01 0.0221 0.169 0.921 CD8_TCM L2
ENSG00000112303 VNN2 618269 sc-eQTL 5.71e-01 0.0949 0.167 0.921 CD8_TCM L2
ENSG00000112306 RPS12 567159 sc-eQTL 7.31e-01 0.0281 0.0815 0.921 CD8_TCM L2
ENSG00000118515 SGK1 -936384 sc-eQTL 9.82e-01 0.00311 0.135 0.921 CD8_TCM L2
ENSG00000146409 SLC18B1 568389 sc-eQTL 8.54e-01 0.0328 0.179 0.921 CD8_TCM L2
ENSG00000028839 TBPL1 -570442 sc-eQTL 6.02e-01 -0.0838 0.161 0.916 CD8_TEM L2
ENSG00000079950 STX7 868530 sc-eQTL 8.82e-01 -0.026 0.175 0.916 CD8_TEM L2
ENSG00000112303 VNN2 618269 sc-eQTL 1.88e-01 -0.229 0.174 0.916 CD8_TEM L2
ENSG00000112306 RPS12 567159 sc-eQTL 9.36e-01 0.0075 0.0938 0.916 CD8_TEM L2
ENSG00000118515 SGK1 -936384 sc-eQTL 4.28e-01 -0.122 0.153 0.916 CD8_TEM L2
ENSG00000146409 SLC18B1 568389 sc-eQTL 8.12e-01 0.0422 0.177 0.916 CD8_TEM L2
ENSG00000028839 TBPL1 -570442 sc-eQTL 7.77e-01 -0.0478 0.168 0.92 MAIT L2
ENSG00000079950 STX7 868530 sc-eQTL 9.27e-02 -0.268 0.159 0.92 MAIT L2
ENSG00000112303 VNN2 618269 sc-eQTL 4.77e-01 -0.116 0.163 0.92 MAIT L2
ENSG00000112306 RPS12 567159 sc-eQTL 5.35e-01 0.0497 0.08 0.92 MAIT L2
ENSG00000118515 SGK1 -936384 sc-eQTL 9.21e-01 0.0111 0.113 0.92 MAIT L2
ENSG00000146409 SLC18B1 568389 sc-eQTL 7.74e-03 -0.444 0.165 0.92 MAIT L2
ENSG00000028839 TBPL1 -570442 sc-eQTL 7.79e-01 0.0507 0.18 0.92 NK_CD56bright L2
ENSG00000079950 STX7 868530 sc-eQTL 2.59e-01 -0.189 0.167 0.92 NK_CD56bright L2
ENSG00000112303 VNN2 618269 sc-eQTL 1.78e-01 -0.228 0.169 0.92 NK_CD56bright L2
ENSG00000112306 RPS12 567159 sc-eQTL 1.59e-01 -0.133 0.0942 0.92 NK_CD56bright L2
ENSG00000118515 SGK1 -936384 sc-eQTL 8.75e-01 -0.0223 0.142 0.92 NK_CD56bright L2
ENSG00000028839 TBPL1 -570442 sc-eQTL 4.07e-01 0.125 0.151 0.92 NK_CD56dim L2
ENSG00000079950 STX7 868530 sc-eQTL 6.26e-01 0.0673 0.138 0.92 NK_CD56dim L2
ENSG00000112303 VNN2 618269 sc-eQTL 2.36e-01 0.205 0.172 0.92 NK_CD56dim L2
ENSG00000112306 RPS12 567159 sc-eQTL 5.08e-01 0.0454 0.0685 0.92 NK_CD56dim L2
ENSG00000118515 SGK1 -936384 sc-eQTL 6.02e-01 -0.0792 0.152 0.92 NK_CD56dim L2
ENSG00000028839 TBPL1 -570442 sc-eQTL 8.41e-01 0.0383 0.19 0.922 NK_HLA L2
ENSG00000079950 STX7 868530 sc-eQTL 2.04e-01 0.22 0.173 0.922 NK_HLA L2
ENSG00000112303 VNN2 618269 sc-eQTL 4.82e-01 -0.124 0.175 0.922 NK_HLA L2
ENSG00000112306 RPS12 567159 sc-eQTL 5.69e-01 -0.0466 0.0817 0.922 NK_HLA L2
ENSG00000118515 SGK1 -936384 sc-eQTL 6.14e-01 -0.0817 0.161 0.922 NK_HLA L2
ENSG00000028839 TBPL1 -570442 sc-eQTL 9.47e-01 -0.0105 0.159 0.92 NK_cytokine L2
ENSG00000079950 STX7 868530 sc-eQTL 1.70e-01 0.21 0.153 0.92 NK_cytokine L2
ENSG00000112303 VNN2 618269 sc-eQTL 5.98e-01 -0.0911 0.172 0.92 NK_cytokine L2
ENSG00000112306 RPS12 567159 sc-eQTL 8.70e-01 -0.0154 0.0936 0.92 NK_cytokine L2
ENSG00000118515 SGK1 -936384 sc-eQTL 3.52e-01 0.145 0.156 0.92 NK_cytokine L2
ENSG00000028839 TBPL1 -570442 sc-eQTL 3.58e-01 -0.214 0.232 0.933 PB L2
ENSG00000079931 MOXD1 980253 sc-eQTL 7.17e-01 0.0721 0.198 0.933 PB L2
ENSG00000079950 STX7 868530 sc-eQTL 9.68e-01 0.00663 0.166 0.933 PB L2
ENSG00000112303 VNN2 618269 sc-eQTL 7.27e-01 -0.0707 0.202 0.933 PB L2
ENSG00000112306 RPS12 567159 sc-eQTL 8.77e-01 0.0179 0.115 0.933 PB L2
ENSG00000118515 SGK1 -936384 sc-eQTL 6.66e-01 -0.0804 0.186 0.933 PB L2
ENSG00000146409 SLC18B1 568389 sc-eQTL 1.40e-01 -0.317 0.213 0.933 PB L2
ENSG00000028839 TBPL1 -570442 sc-eQTL 5.20e-01 0.113 0.175 0.922 Pro_T L2
ENSG00000079950 STX7 868530 sc-eQTL 5.31e-01 0.0984 0.157 0.922 Pro_T L2
ENSG00000112303 VNN2 618269 sc-eQTL 9.88e-01 0.00255 0.168 0.922 Pro_T L2
ENSG00000112306 RPS12 567159 sc-eQTL 3.08e-01 -0.0649 0.0635 0.922 Pro_T L2
ENSG00000118515 SGK1 -936384 sc-eQTL 6.17e-01 0.0639 0.127 0.922 Pro_T L2
ENSG00000146409 SLC18B1 568389 sc-eQTL 7.19e-01 0.0594 0.165 0.922 Pro_T L2
ENSG00000028839 TBPL1 -570442 sc-eQTL 6.03e-01 -0.0899 0.172 0.921 Treg L2
ENSG00000079950 STX7 868530 sc-eQTL 3.51e-01 0.152 0.162 0.921 Treg L2
ENSG00000112303 VNN2 618269 sc-eQTL 2.17e-01 0.169 0.136 0.921 Treg L2
ENSG00000112306 RPS12 567159 sc-eQTL 8.40e-01 -0.0123 0.0605 0.921 Treg L2
ENSG00000118515 SGK1 -936384 sc-eQTL 3.77e-01 0.113 0.127 0.921 Treg L2
ENSG00000146409 SLC18B1 568389 sc-eQTL 1.65e-01 -0.237 0.17 0.921 Treg L2
ENSG00000028839 TBPL1 -570442 sc-eQTL 2.73e-01 -0.196 0.178 0.915 cDC L2
ENSG00000079950 STX7 868530 sc-eQTL 7.93e-01 0.0368 0.14 0.915 cDC L2
ENSG00000093134 VNN3 646963 sc-eQTL 6.74e-01 -0.0586 0.139 0.915 cDC L2
ENSG00000112299 VNN1 667673 sc-eQTL 9.35e-01 -0.0134 0.164 0.915 cDC L2
ENSG00000112303 VNN2 618269 sc-eQTL 8.30e-02 -0.276 0.158 0.915 cDC L2
ENSG00000112306 RPS12 567159 sc-eQTL 4.78e-01 0.0559 0.0786 0.915 cDC L2
ENSG00000118515 SGK1 -936384 sc-eQTL 1.05e-03 -0.429 0.129 0.915 cDC L2
ENSG00000146409 SLC18B1 568389 sc-eQTL 4.21e-01 -0.126 0.156 0.915 cDC L2
ENSG00000286438 AL591115.1 278600 sc-eQTL 9.78e-02 -0.206 0.124 0.915 cDC L2
ENSG00000286887 AL355881.1 -914573 sc-eQTL 2.28e-01 -0.185 0.153 0.915 cDC L2
ENSG00000028839 TBPL1 -570442 sc-eQTL 5.26e-01 -0.0909 0.143 0.921 cMono_IL1B L2
ENSG00000079950 STX7 868530 sc-eQTL 7.56e-01 0.0338 0.109 0.921 cMono_IL1B L2
ENSG00000093134 VNN3 646963 sc-eQTL 8.84e-01 -0.0225 0.154 0.921 cMono_IL1B L2
ENSG00000112299 VNN1 667673 sc-eQTL 8.31e-01 -0.033 0.155 0.921 cMono_IL1B L2
ENSG00000112303 VNN2 618269 sc-eQTL 6.89e-02 -0.225 0.123 0.921 cMono_IL1B L2
ENSG00000112306 RPS12 567159 sc-eQTL 6.14e-01 -0.0347 0.0688 0.921 cMono_IL1B L2
ENSG00000118515 SGK1 -936384 sc-eQTL 8.29e-02 -0.177 0.102 0.921 cMono_IL1B L2
ENSG00000146409 SLC18B1 568389 sc-eQTL 8.89e-01 0.0185 0.133 0.921 cMono_IL1B L2
ENSG00000286887 AL355881.1 -914573 sc-eQTL 7.82e-02 -0.243 0.137 0.921 cMono_IL1B L2
ENSG00000028839 TBPL1 -570442 sc-eQTL 9.36e-01 -0.0131 0.163 0.921 cMono_S100A L2
ENSG00000079950 STX7 868530 sc-eQTL 1.24e-01 0.181 0.117 0.921 cMono_S100A L2
ENSG00000093134 VNN3 646963 sc-eQTL 8.90e-01 0.0202 0.147 0.921 cMono_S100A L2
ENSG00000112299 VNN1 667673 sc-eQTL 5.01e-01 0.107 0.159 0.921 cMono_S100A L2
ENSG00000112303 VNN2 618269 sc-eQTL 4.89e-02 -0.205 0.103 0.921 cMono_S100A L2
ENSG00000112306 RPS12 567159 sc-eQTL 8.45e-01 0.0147 0.0751 0.921 cMono_S100A L2
ENSG00000118515 SGK1 -936384 sc-eQTL 6.35e-01 -0.0408 0.0859 0.921 cMono_S100A L2
ENSG00000146409 SLC18B1 568389 sc-eQTL 2.00e-01 -0.178 0.139 0.921 cMono_S100A L2
ENSG00000286887 AL355881.1 -914573 sc-eQTL 9.60e-02 -0.226 0.135 0.921 cMono_S100A L2
ENSG00000028839 TBPL1 -570442 sc-eQTL 8.15e-01 0.0521 0.223 0.921 gdT L2
ENSG00000079950 STX7 868530 sc-eQTL 9.52e-01 0.0115 0.192 0.921 gdT L2
ENSG00000112303 VNN2 618269 sc-eQTL 7.10e-02 -0.381 0.21 0.921 gdT L2
ENSG00000112306 RPS12 567159 sc-eQTL 9.32e-01 -0.0069 0.0808 0.921 gdT L2
ENSG00000118515 SGK1 -936384 sc-eQTL 8.04e-01 0.0379 0.152 0.921 gdT L2
ENSG00000146409 SLC18B1 568389 sc-eQTL 6.90e-01 -0.0835 0.209 0.921 gdT L2
ENSG00000028839 TBPL1 -570442 sc-eQTL 8.00e-01 0.042 0.166 0.918 intMono L2
ENSG00000079950 STX7 868530 sc-eQTL 3.71e-01 0.141 0.158 0.918 intMono L2
ENSG00000093134 VNN3 646963 sc-eQTL 7.85e-01 -0.0436 0.16 0.918 intMono L2
ENSG00000112299 VNN1 667673 sc-eQTL 8.11e-01 0.0378 0.158 0.918 intMono L2
ENSG00000112303 VNN2 618269 sc-eQTL 1.84e-01 -0.213 0.16 0.918 intMono L2
ENSG00000112306 RPS12 567159 sc-eQTL 1.10e-01 -0.111 0.0694 0.918 intMono L2
ENSG00000118515 SGK1 -936384 sc-eQTL 9.01e-01 -0.0146 0.117 0.918 intMono L2
ENSG00000146409 SLC18B1 568389 sc-eQTL 2.29e-02 -0.385 0.168 0.918 intMono L2
ENSG00000286887 AL355881.1 -914573 sc-eQTL 8.84e-02 -0.276 0.161 0.918 intMono L2
ENSG00000028839 TBPL1 -570442 sc-eQTL 1.65e-01 -0.241 0.173 0.919 ncMono L2
ENSG00000079950 STX7 868530 sc-eQTL 5.87e-01 -0.064 0.117 0.919 ncMono L2
ENSG00000093134 VNN3 646963 sc-eQTL 1.98e-03 -0.508 0.162 0.919 ncMono L2
ENSG00000112299 VNN1 667673 sc-eQTL 5.92e-01 -0.0884 0.165 0.919 ncMono L2
ENSG00000112303 VNN2 618269 sc-eQTL 6.48e-02 -0.292 0.157 0.919 ncMono L2
ENSG00000112306 RPS12 567159 sc-eQTL 3.41e-01 0.0757 0.0792 0.919 ncMono L2
ENSG00000118515 SGK1 -936384 sc-eQTL 8.46e-01 -0.0219 0.112 0.919 ncMono L2
ENSG00000146409 SLC18B1 568389 sc-eQTL 3.18e-01 0.14 0.14 0.919 ncMono L2
ENSG00000286887 AL355881.1 -914573 sc-eQTL 1.29e-01 0.225 0.147 0.919 ncMono L2
ENSG00000028839 TBPL1 -570442 sc-eQTL 4.52e-01 0.151 0.201 0.915 pDC L2
ENSG00000079950 STX7 868530 sc-eQTL 1.04e-01 -0.217 0.133 0.915 pDC L2
ENSG00000093134 VNN3 646963 sc-eQTL 3.89e-01 -0.116 0.134 0.915 pDC L2
ENSG00000112299 VNN1 667673 sc-eQTL 4.79e-02 -0.27 0.135 0.915 pDC L2
ENSG00000112303 VNN2 618269 sc-eQTL 5.66e-01 0.0937 0.163 0.915 pDC L2
ENSG00000112306 RPS12 567159 sc-eQTL 2.64e-02 -0.248 0.111 0.915 pDC L2
ENSG00000118515 SGK1 -936384 sc-eQTL 5.97e-01 -0.0604 0.114 0.915 pDC L2
ENSG00000146409 SLC18B1 568389 sc-eQTL 1.55e-01 -0.236 0.165 0.915 pDC L2
ENSG00000286438 AL591115.1 278600 sc-eQTL 6.02e-01 -0.0832 0.159 0.915 pDC L2
ENSG00000286887 AL355881.1 -914573 sc-eQTL 8.42e-01 -0.0283 0.141 0.915 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -570442 sc-eQTL 2.43e-01 0.202 0.173 0.921 B_Memory LOneK1K
ENSG00000079931 MOXD1 980253 sc-eQTL 1.76e-01 0.227 0.167 0.921 B_Memory LOneK1K
ENSG00000079950 STX7 868530 sc-eQTL 1.83e-03 0.294 0.0931 0.921 B_Memory LOneK1K
ENSG00000112303 VNN2 618269 sc-eQTL 4.35e-01 -0.118 0.15 0.921 B_Memory LOneK1K
ENSG00000112306 RPS12 567159 sc-eQTL 4.84e-02 0.169 0.0851 0.921 B_Memory LOneK1K
ENSG00000118515 SGK1 -936384 sc-eQTL 2.23e-01 -0.164 0.134 0.921 B_Memory LOneK1K
ENSG00000146409 SLC18B1 568389 sc-eQTL 7.28e-01 0.0548 0.158 0.921 B_Memory LOneK1K
ENSG00000028839 TBPL1 -570442 sc-eQTL 7.73e-03 -0.428 0.159 0.921 B_Naive LOneK1K
ENSG00000079931 MOXD1 980253 sc-eQTL 3.14e-01 0.179 0.177 0.921 B_Naive LOneK1K
ENSG00000079950 STX7 868530 sc-eQTL 1.03e-02 0.186 0.0718 0.921 B_Naive LOneK1K
ENSG00000112303 VNN2 618269 sc-eQTL 9.39e-02 -0.237 0.141 0.921 B_Naive LOneK1K
ENSG00000112306 RPS12 567159 sc-eQTL 9.49e-02 0.143 0.0851 0.921 B_Naive LOneK1K
ENSG00000118515 SGK1 -936384 sc-eQTL 6.55e-01 -0.0592 0.133 0.921 B_Naive LOneK1K
ENSG00000146409 SLC18B1 568389 sc-eQTL 3.55e-01 -0.15 0.161 0.921 B_Naive LOneK1K
ENSG00000028839 TBPL1 -570442 sc-eQTL 7.66e-01 -0.0388 0.13 0.921 CD14_Mono LOneK1K
ENSG00000079950 STX7 868530 sc-eQTL 2.82e-01 0.0976 0.0904 0.921 CD14_Mono LOneK1K
ENSG00000093134 VNN3 646963 sc-eQTL 9.55e-01 -0.00828 0.148 0.921 CD14_Mono LOneK1K
ENSG00000112299 VNN1 667673 sc-eQTL 9.18e-01 0.0159 0.154 0.921 CD14_Mono LOneK1K
ENSG00000112303 VNN2 618269 sc-eQTL 1.99e-02 -0.236 0.101 0.921 CD14_Mono LOneK1K
ENSG00000112306 RPS12 567159 sc-eQTL 5.95e-01 -0.0372 0.0698 0.921 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -936384 sc-eQTL 1.29e-01 -0.144 0.0947 0.921 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 568389 sc-eQTL 5.30e-01 -0.0781 0.124 0.921 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -914573 sc-eQTL 3.26e-02 -0.278 0.129 0.921 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -570442 sc-eQTL 5.66e-01 -0.0966 0.168 0.92 CD16_Mono LOneK1K
ENSG00000079950 STX7 868530 sc-eQTL 6.56e-01 0.0494 0.111 0.92 CD16_Mono LOneK1K
ENSG00000093134 VNN3 646963 sc-eQTL 6.18e-02 -0.304 0.162 0.92 CD16_Mono LOneK1K
ENSG00000112299 VNN1 667673 sc-eQTL 9.19e-01 -0.0164 0.162 0.92 CD16_Mono LOneK1K
ENSG00000112303 VNN2 618269 sc-eQTL 1.07e-01 -0.245 0.151 0.92 CD16_Mono LOneK1K
ENSG00000112306 RPS12 567159 sc-eQTL 6.12e-01 0.0328 0.0646 0.92 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -936384 sc-eQTL 6.38e-01 -0.046 0.0978 0.92 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 568389 sc-eQTL 6.41e-02 -0.29 0.156 0.92 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -914573 sc-eQTL 3.31e-01 -0.138 0.142 0.92 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -570442 sc-eQTL 5.68e-01 0.0793 0.139 0.92 NK_CD56dim LOneK1K
ENSG00000079950 STX7 868530 sc-eQTL 1.14e-01 0.205 0.129 0.92 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 618269 sc-eQTL 7.94e-01 0.043 0.165 0.92 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 567159 sc-eQTL 4.66e-01 0.0491 0.0672 0.92 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -936384 sc-eQTL 9.88e-01 0.00217 0.139 0.92 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000093134 VNN3 646963 eQTL 0.0235 -0.0639 0.0281 0.0 0.0 0.0667
ENSG00000112303 VNN2 618269 pQTL 0.0337 -0.107 0.0503 0.0 0.0 0.0647
ENSG00000234484 AL032821.1 629053 eQTL 0.0262 0.134 0.06 0.0 0.0 0.0667

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079950 \N 868530 2.69e-07 1.3e-07 4.91e-08 1.86e-07 1.01e-07 9.76e-08 1.49e-07 5.4e-08 1.45e-07 4.94e-08 1.62e-07 8.68e-08 1.41e-07 6.76e-08 6.12e-08 7.53e-08 3.93e-08 1.26e-07 5.97e-08 4.21e-08 1.21e-07 1.28e-07 1.39e-07 2.95e-08 1.4e-07 1.14e-07 1.07e-07 9.74e-08 1.09e-07 1.07e-07 9.64e-08 3.59e-08 3.66e-08 8.34e-08 7.02e-08 3.28e-08 5.04e-08 8.72e-08 6.55e-08 3.76e-08 5.03e-08 1.35e-07 5.24e-08 1.25e-08 3.81e-08 1.87e-08 1.18e-07 1.96e-09 5e-08