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Genes within 1Mb (chr6:133380181:C:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -571989 sc-eQTL 5.30e-01 -0.0538 0.0856 0.447 B L1
ENSG00000079931 MOXD1 978706 sc-eQTL 3.43e-02 -0.191 0.0895 0.447 B L1
ENSG00000079950 STX7 866983 sc-eQTL 4.00e-01 -0.0287 0.0341 0.447 B L1
ENSG00000112303 VNN2 616722 sc-eQTL 6.53e-01 -0.0289 0.0641 0.447 B L1
ENSG00000112306 RPS12 565612 sc-eQTL 5.36e-01 -0.024 0.0387 0.447 B L1
ENSG00000118515 SGK1 -937931 sc-eQTL 5.15e-01 0.039 0.0597 0.447 B L1
ENSG00000146409 SLC18B1 566842 sc-eQTL 3.82e-01 -0.0714 0.0815 0.447 B L1
ENSG00000028839 TBPL1 -571989 sc-eQTL 8.52e-01 -0.0118 0.0631 0.447 CD4T L1
ENSG00000079950 STX7 866983 sc-eQTL 5.55e-01 -0.0388 0.0656 0.447 CD4T L1
ENSG00000112303 VNN2 616722 sc-eQTL 2.97e-01 -0.0593 0.0567 0.447 CD4T L1
ENSG00000112306 RPS12 565612 sc-eQTL 8.82e-01 0.00573 0.0387 0.447 CD4T L1
ENSG00000118515 SGK1 -937931 sc-eQTL 8.76e-01 0.00813 0.052 0.447 CD4T L1
ENSG00000146409 SLC18B1 566842 sc-eQTL 2.39e-01 -0.0921 0.078 0.447 CD4T L1
ENSG00000028839 TBPL1 -571989 sc-eQTL 4.78e-01 -0.0448 0.0629 0.447 CD8T L1
ENSG00000079950 STX7 866983 sc-eQTL 1.74e-02 -0.156 0.0649 0.447 CD8T L1
ENSG00000112303 VNN2 616722 sc-eQTL 9.45e-01 0.00532 0.0768 0.447 CD8T L1
ENSG00000112306 RPS12 565612 sc-eQTL 4.80e-01 -0.0185 0.0262 0.447 CD8T L1
ENSG00000118515 SGK1 -937931 sc-eQTL 2.67e-01 0.0449 0.0403 0.447 CD8T L1
ENSG00000146409 SLC18B1 566842 sc-eQTL 8.24e-01 -0.0177 0.0793 0.447 CD8T L1
ENSG00000028839 TBPL1 -571989 sc-eQTL 2.22e-01 -0.117 0.0951 0.446 DC L1
ENSG00000079950 STX7 866983 sc-eQTL 6.15e-01 -0.0299 0.0593 0.446 DC L1
ENSG00000093134 VNN3 645416 sc-eQTL 3.07e-01 -0.0752 0.0733 0.446 DC L1
ENSG00000112299 VNN1 666126 sc-eQTL 3.26e-01 -0.078 0.0792 0.446 DC L1
ENSG00000112303 VNN2 616722 sc-eQTL 5.86e-02 -0.16 0.0842 0.446 DC L1
ENSG00000112306 RPS12 565612 sc-eQTL 9.93e-01 -0.000442 0.0476 0.446 DC L1
ENSG00000118515 SGK1 -937931 sc-eQTL 3.59e-01 -0.0507 0.0551 0.446 DC L1
ENSG00000146409 SLC18B1 566842 sc-eQTL 4.38e-01 0.0585 0.0752 0.446 DC L1
ENSG00000286438 AL591115.1 277053 sc-eQTL 4.23e-01 -0.055 0.0685 0.446 DC L1
ENSG00000286887 AL355881.1 -916120 sc-eQTL 5.62e-01 0.0496 0.0854 0.446 DC L1
ENSG00000028839 TBPL1 -571989 sc-eQTL 6.56e-01 -0.0296 0.0663 0.447 Mono L1
ENSG00000079950 STX7 866983 sc-eQTL 1.89e-01 0.0582 0.0442 0.447 Mono L1
ENSG00000093134 VNN3 645416 sc-eQTL 1.12e-01 -0.121 0.0757 0.447 Mono L1
ENSG00000112299 VNN1 666126 sc-eQTL 4.24e-01 0.0655 0.0818 0.447 Mono L1
ENSG00000112303 VNN2 616722 sc-eQTL 1.40e-01 -0.0853 0.0575 0.447 Mono L1
ENSG00000112306 RPS12 565612 sc-eQTL 1.10e-01 0.0553 0.0344 0.447 Mono L1
ENSG00000118515 SGK1 -937931 sc-eQTL 8.12e-01 0.0116 0.0489 0.447 Mono L1
ENSG00000146409 SLC18B1 566842 sc-eQTL 8.94e-01 0.00914 0.0685 0.447 Mono L1
ENSG00000286887 AL355881.1 -916120 sc-eQTL 4.61e-01 0.0497 0.0673 0.447 Mono L1
ENSG00000028839 TBPL1 -571989 sc-eQTL 7.18e-01 0.0268 0.074 0.444 NK L1
ENSG00000079950 STX7 866983 sc-eQTL 3.89e-01 -0.0591 0.0683 0.444 NK L1
ENSG00000112303 VNN2 616722 sc-eQTL 8.29e-01 -0.0185 0.0852 0.444 NK L1
ENSG00000112306 RPS12 565612 sc-eQTL 9.11e-01 0.00395 0.0353 0.444 NK L1
ENSG00000118515 SGK1 -937931 sc-eQTL 8.47e-01 0.0126 0.0652 0.444 NK L1
ENSG00000028839 TBPL1 -571989 sc-eQTL 3.79e-01 0.0748 0.0847 0.447 Other_T L1
ENSG00000079950 STX7 866983 sc-eQTL 6.29e-01 -0.0323 0.0668 0.447 Other_T L1
ENSG00000112303 VNN2 616722 sc-eQTL 6.25e-01 0.0395 0.0807 0.447 Other_T L1
ENSG00000112306 RPS12 565612 sc-eQTL 4.71e-01 0.0231 0.032 0.447 Other_T L1
ENSG00000118515 SGK1 -937931 sc-eQTL 2.23e-01 0.0717 0.0587 0.447 Other_T L1
ENSG00000146409 SLC18B1 566842 sc-eQTL 3.89e-01 -0.0755 0.0875 0.447 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -571989 sc-eQTL 4.82e-01 -0.0703 0.0999 0.449 B_Activated L2
ENSG00000079931 MOXD1 978706 sc-eQTL 9.41e-01 -0.0068 0.0913 0.449 B_Activated L2
ENSG00000079950 STX7 866983 sc-eQTL 6.46e-01 -0.0394 0.0856 0.449 B_Activated L2
ENSG00000112303 VNN2 616722 sc-eQTL 6.04e-01 -0.0473 0.0911 0.449 B_Activated L2
ENSG00000112306 RPS12 565612 sc-eQTL 8.83e-01 -0.00718 0.0488 0.449 B_Activated L2
ENSG00000118515 SGK1 -937931 sc-eQTL 6.68e-01 0.0373 0.0871 0.449 B_Activated L2
ENSG00000146409 SLC18B1 566842 sc-eQTL 8.42e-01 -0.0171 0.0855 0.449 B_Activated L2
ENSG00000028839 TBPL1 -571989 sc-eQTL 6.60e-01 -0.0418 0.095 0.448 B_Intermediate L2
ENSG00000079931 MOXD1 978706 sc-eQTL 3.30e-03 -0.243 0.0817 0.448 B_Intermediate L2
ENSG00000079950 STX7 866983 sc-eQTL 1.77e-01 -0.0737 0.0543 0.448 B_Intermediate L2
ENSG00000112303 VNN2 616722 sc-eQTL 2.59e-01 -0.0927 0.0819 0.448 B_Intermediate L2
ENSG00000112306 RPS12 565612 sc-eQTL 5.35e-01 -0.0313 0.0503 0.448 B_Intermediate L2
ENSG00000118515 SGK1 -937931 sc-eQTL 2.56e-01 0.0988 0.0868 0.448 B_Intermediate L2
ENSG00000146409 SLC18B1 566842 sc-eQTL 9.96e-01 0.000482 0.0907 0.448 B_Intermediate L2
ENSG00000028839 TBPL1 -571989 sc-eQTL 9.73e-02 0.149 0.0896 0.446 B_Memory L2
ENSG00000079931 MOXD1 978706 sc-eQTL 6.42e-01 -0.0387 0.0832 0.446 B_Memory L2
ENSG00000079950 STX7 866983 sc-eQTL 6.22e-02 -0.121 0.0647 0.446 B_Memory L2
ENSG00000112303 VNN2 616722 sc-eQTL 7.78e-02 -0.15 0.0847 0.446 B_Memory L2
ENSG00000112306 RPS12 565612 sc-eQTL 3.07e-01 -0.042 0.041 0.446 B_Memory L2
ENSG00000118515 SGK1 -937931 sc-eQTL 9.14e-01 0.00817 0.0755 0.446 B_Memory L2
ENSG00000146409 SLC18B1 566842 sc-eQTL 2.12e-01 0.107 0.0855 0.446 B_Memory L2
ENSG00000028839 TBPL1 -571989 sc-eQTL 7.36e-01 -0.0288 0.0852 0.447 B_Naive1 L2
ENSG00000079931 MOXD1 978706 sc-eQTL 2.58e-02 -0.208 0.0926 0.447 B_Naive1 L2
ENSG00000079950 STX7 866983 sc-eQTL 9.13e-01 0.0045 0.041 0.447 B_Naive1 L2
ENSG00000112303 VNN2 616722 sc-eQTL 4.34e-01 0.0623 0.0794 0.447 B_Naive1 L2
ENSG00000112306 RPS12 565612 sc-eQTL 7.54e-01 -0.0142 0.0453 0.447 B_Naive1 L2
ENSG00000118515 SGK1 -937931 sc-eQTL 3.35e-01 -0.0683 0.0707 0.447 B_Naive1 L2
ENSG00000146409 SLC18B1 566842 sc-eQTL 6.14e-01 -0.0441 0.0874 0.447 B_Naive1 L2
ENSG00000028839 TBPL1 -571989 sc-eQTL 5.38e-02 -0.173 0.0894 0.446 B_Naive2 L2
ENSG00000079931 MOXD1 978706 sc-eQTL 3.09e-01 -0.0894 0.0878 0.446 B_Naive2 L2
ENSG00000079950 STX7 866983 sc-eQTL 7.12e-01 -0.0177 0.0479 0.446 B_Naive2 L2
ENSG00000112303 VNN2 616722 sc-eQTL 8.02e-01 -0.0221 0.088 0.446 B_Naive2 L2
ENSG00000112306 RPS12 565612 sc-eQTL 1.17e-01 -0.0729 0.0463 0.446 B_Naive2 L2
ENSG00000118515 SGK1 -937931 sc-eQTL 7.32e-01 0.0282 0.0823 0.446 B_Naive2 L2
ENSG00000146409 SLC18B1 566842 sc-eQTL 3.90e-02 -0.183 0.088 0.446 B_Naive2 L2
ENSG00000028839 TBPL1 -571989 sc-eQTL 6.58e-01 -0.0408 0.0918 0.448 CD4_CTL L2
ENSG00000079950 STX7 866983 sc-eQTL 9.57e-01 0.00496 0.0912 0.448 CD4_CTL L2
ENSG00000112303 VNN2 616722 sc-eQTL 5.39e-02 -0.177 0.0912 0.448 CD4_CTL L2
ENSG00000112306 RPS12 565612 sc-eQTL 2.61e-01 -0.0478 0.0424 0.448 CD4_CTL L2
ENSG00000118515 SGK1 -937931 sc-eQTL 1.17e-01 0.115 0.0733 0.448 CD4_CTL L2
ENSG00000146409 SLC18B1 566842 sc-eQTL 8.67e-02 -0.147 0.0851 0.448 CD4_CTL L2
ENSG00000028839 TBPL1 -571989 sc-eQTL 7.29e-01 0.0252 0.0726 0.447 CD4_Naive L2
ENSG00000079950 STX7 866983 sc-eQTL 7.39e-01 0.0237 0.0712 0.447 CD4_Naive L2
ENSG00000112303 VNN2 616722 sc-eQTL 4.84e-01 -0.0462 0.0659 0.447 CD4_Naive L2
ENSG00000112306 RPS12 565612 sc-eQTL 8.15e-01 -0.01 0.0428 0.447 CD4_Naive L2
ENSG00000118515 SGK1 -937931 sc-eQTL 6.41e-01 0.0245 0.0524 0.447 CD4_Naive L2
ENSG00000146409 SLC18B1 566842 sc-eQTL 2.57e-01 -0.0933 0.0821 0.447 CD4_Naive L2
ENSG00000028839 TBPL1 -571989 sc-eQTL 2.29e-01 -0.0937 0.0777 0.447 CD4_TCM L2
ENSG00000079950 STX7 866983 sc-eQTL 3.09e-01 -0.0798 0.0783 0.447 CD4_TCM L2
ENSG00000112303 VNN2 616722 sc-eQTL 6.11e-01 -0.0394 0.0773 0.447 CD4_TCM L2
ENSG00000112306 RPS12 565612 sc-eQTL 9.73e-01 -0.00136 0.0401 0.447 CD4_TCM L2
ENSG00000118515 SGK1 -937931 sc-eQTL 7.84e-01 -0.0154 0.0561 0.447 CD4_TCM L2
ENSG00000146409 SLC18B1 566842 sc-eQTL 5.17e-01 -0.0602 0.0928 0.447 CD4_TCM L2
ENSG00000028839 TBPL1 -571989 sc-eQTL 9.36e-01 0.00732 0.0908 0.447 CD4_TEM L2
ENSG00000079950 STX7 866983 sc-eQTL 6.16e-01 -0.0457 0.0908 0.447 CD4_TEM L2
ENSG00000112303 VNN2 616722 sc-eQTL 3.74e-01 -0.0776 0.0871 0.447 CD4_TEM L2
ENSG00000112306 RPS12 565612 sc-eQTL 5.58e-01 0.021 0.0357 0.447 CD4_TEM L2
ENSG00000118515 SGK1 -937931 sc-eQTL 5.32e-01 0.0385 0.0614 0.447 CD4_TEM L2
ENSG00000146409 SLC18B1 566842 sc-eQTL 4.65e-01 -0.0651 0.0888 0.447 CD4_TEM L2
ENSG00000028839 TBPL1 -571989 sc-eQTL 6.41e-01 -0.0376 0.0807 0.447 CD8_CTL L2
ENSG00000079950 STX7 866983 sc-eQTL 2.24e-02 -0.171 0.0745 0.447 CD8_CTL L2
ENSG00000112303 VNN2 616722 sc-eQTL 4.67e-01 0.0624 0.0856 0.447 CD8_CTL L2
ENSG00000112306 RPS12 565612 sc-eQTL 5.41e-01 -0.028 0.0458 0.447 CD8_CTL L2
ENSG00000118515 SGK1 -937931 sc-eQTL 5.38e-01 0.0477 0.0774 0.447 CD8_CTL L2
ENSG00000146409 SLC18B1 566842 sc-eQTL 3.02e-01 -0.0917 0.0887 0.447 CD8_CTL L2
ENSG00000028839 TBPL1 -571989 sc-eQTL 8.64e-01 0.0144 0.0842 0.447 CD8_Naive L2
ENSG00000079950 STX7 866983 sc-eQTL 4.35e-02 -0.181 0.0889 0.447 CD8_Naive L2
ENSG00000112303 VNN2 616722 sc-eQTL 8.87e-01 0.011 0.0775 0.447 CD8_Naive L2
ENSG00000112306 RPS12 565612 sc-eQTL 2.80e-01 0.0479 0.0442 0.447 CD8_Naive L2
ENSG00000118515 SGK1 -937931 sc-eQTL 2.54e-01 0.0635 0.0555 0.447 CD8_Naive L2
ENSG00000146409 SLC18B1 566842 sc-eQTL 2.97e-01 -0.0927 0.0887 0.447 CD8_Naive L2
ENSG00000028839 TBPL1 -571989 sc-eQTL 7.25e-01 0.0337 0.0957 0.442 CD8_TCM L2
ENSG00000079950 STX7 866983 sc-eQTL 8.86e-01 0.0127 0.0886 0.442 CD8_TCM L2
ENSG00000112303 VNN2 616722 sc-eQTL 9.74e-01 0.00286 0.088 0.442 CD8_TCM L2
ENSG00000112306 RPS12 565612 sc-eQTL 8.86e-01 0.00615 0.0429 0.442 CD8_TCM L2
ENSG00000118515 SGK1 -937931 sc-eQTL 5.26e-01 0.0451 0.0709 0.442 CD8_TCM L2
ENSG00000146409 SLC18B1 566842 sc-eQTL 2.37e-01 -0.111 0.0936 0.442 CD8_TCM L2
ENSG00000028839 TBPL1 -571989 sc-eQTL 2.50e-02 0.196 0.087 0.457 CD8_TEM L2
ENSG00000079950 STX7 866983 sc-eQTL 1.77e-02 0.227 0.0948 0.457 CD8_TEM L2
ENSG00000112303 VNN2 616722 sc-eQTL 9.16e-01 0.0101 0.0956 0.457 CD8_TEM L2
ENSG00000112306 RPS12 565612 sc-eQTL 4.21e-01 -0.0414 0.0514 0.457 CD8_TEM L2
ENSG00000118515 SGK1 -937931 sc-eQTL 6.62e-01 -0.0368 0.0842 0.457 CD8_TEM L2
ENSG00000146409 SLC18B1 566842 sc-eQTL 7.53e-01 0.0307 0.0972 0.457 CD8_TEM L2
ENSG00000028839 TBPL1 -571989 sc-eQTL 9.07e-01 0.0108 0.092 0.448 MAIT L2
ENSG00000079950 STX7 866983 sc-eQTL 9.94e-01 -0.000664 0.0874 0.448 MAIT L2
ENSG00000112303 VNN2 616722 sc-eQTL 6.10e-01 -0.0454 0.0888 0.448 MAIT L2
ENSG00000112306 RPS12 565612 sc-eQTL 3.99e-01 0.0369 0.0437 0.448 MAIT L2
ENSG00000118515 SGK1 -937931 sc-eQTL 3.21e-01 0.061 0.0614 0.448 MAIT L2
ENSG00000146409 SLC18B1 566842 sc-eQTL 4.13e-01 -0.0751 0.0915 0.448 MAIT L2
ENSG00000028839 TBPL1 -571989 sc-eQTL 8.47e-01 -0.0188 0.0974 0.449 NK_CD56bright L2
ENSG00000079950 STX7 866983 sc-eQTL 7.11e-01 -0.0335 0.0902 0.449 NK_CD56bright L2
ENSG00000112303 VNN2 616722 sc-eQTL 4.30e-01 -0.0724 0.0915 0.449 NK_CD56bright L2
ENSG00000112306 RPS12 565612 sc-eQTL 6.04e-01 -0.0265 0.051 0.449 NK_CD56bright L2
ENSG00000118515 SGK1 -937931 sc-eQTL 8.74e-01 0.0122 0.0763 0.449 NK_CD56bright L2
ENSG00000028839 TBPL1 -571989 sc-eQTL 7.55e-01 0.0247 0.079 0.442 NK_CD56dim L2
ENSG00000079950 STX7 866983 sc-eQTL 6.51e-01 -0.0328 0.0723 0.442 NK_CD56dim L2
ENSG00000112303 VNN2 616722 sc-eQTL 6.80e-01 0.0373 0.0904 0.442 NK_CD56dim L2
ENSG00000112306 RPS12 565612 sc-eQTL 4.23e-01 -0.0288 0.0358 0.442 NK_CD56dim L2
ENSG00000118515 SGK1 -937931 sc-eQTL 9.71e-01 0.00291 0.0795 0.442 NK_CD56dim L2
ENSG00000028839 TBPL1 -571989 sc-eQTL 6.43e-01 0.0459 0.0989 0.443 NK_HLA L2
ENSG00000079950 STX7 866983 sc-eQTL 8.29e-01 -0.0195 0.09 0.443 NK_HLA L2
ENSG00000112303 VNN2 616722 sc-eQTL 7.37e-01 0.0307 0.0911 0.443 NK_HLA L2
ENSG00000112306 RPS12 565612 sc-eQTL 4.95e-01 -0.029 0.0424 0.443 NK_HLA L2
ENSG00000118515 SGK1 -937931 sc-eQTL 5.27e-01 -0.0531 0.0838 0.443 NK_HLA L2
ENSG00000028839 TBPL1 -571989 sc-eQTL 9.27e-01 -0.00751 0.0821 0.442 NK_cytokine L2
ENSG00000079950 STX7 866983 sc-eQTL 3.14e-01 -0.08 0.0793 0.442 NK_cytokine L2
ENSG00000112303 VNN2 616722 sc-eQTL 7.44e-01 0.0292 0.0894 0.442 NK_cytokine L2
ENSG00000112306 RPS12 565612 sc-eQTL 7.70e-01 -0.0142 0.0485 0.442 NK_cytokine L2
ENSG00000118515 SGK1 -937931 sc-eQTL 3.96e-01 0.0685 0.0806 0.442 NK_cytokine L2
ENSG00000028839 TBPL1 -571989 sc-eQTL 3.91e-01 0.098 0.114 0.444 PB L2
ENSG00000079931 MOXD1 978706 sc-eQTL 6.04e-01 -0.0506 0.0974 0.444 PB L2
ENSG00000079950 STX7 866983 sc-eQTL 8.76e-01 0.0127 0.0814 0.444 PB L2
ENSG00000112303 VNN2 616722 sc-eQTL 6.08e-01 -0.0511 0.0993 0.444 PB L2
ENSG00000112306 RPS12 565612 sc-eQTL 3.44e-01 0.0535 0.0562 0.444 PB L2
ENSG00000118515 SGK1 -937931 sc-eQTL 1.12e-01 0.145 0.0902 0.444 PB L2
ENSG00000146409 SLC18B1 566842 sc-eQTL 4.88e-01 0.0735 0.106 0.444 PB L2
ENSG00000028839 TBPL1 -571989 sc-eQTL 2.68e-01 0.101 0.0908 0.45 Pro_T L2
ENSG00000079950 STX7 866983 sc-eQTL 1.52e-01 -0.116 0.0809 0.45 Pro_T L2
ENSG00000112303 VNN2 616722 sc-eQTL 5.37e-01 0.0539 0.0872 0.45 Pro_T L2
ENSG00000112306 RPS12 565612 sc-eQTL 9.04e-01 0.004 0.033 0.45 Pro_T L2
ENSG00000118515 SGK1 -937931 sc-eQTL 4.20e-01 0.0534 0.0661 0.45 Pro_T L2
ENSG00000146409 SLC18B1 566842 sc-eQTL 4.00e-01 -0.072 0.0853 0.45 Pro_T L2
ENSG00000028839 TBPL1 -571989 sc-eQTL 2.84e-01 0.0996 0.0927 0.447 Treg L2
ENSG00000079950 STX7 866983 sc-eQTL 7.05e-01 -0.0332 0.0876 0.447 Treg L2
ENSG00000112303 VNN2 616722 sc-eQTL 7.84e-01 -0.0202 0.0737 0.447 Treg L2
ENSG00000112306 RPS12 565612 sc-eQTL 5.29e-01 0.0206 0.0326 0.447 Treg L2
ENSG00000118515 SGK1 -937931 sc-eQTL 9.96e-01 -0.000365 0.0687 0.447 Treg L2
ENSG00000146409 SLC18B1 566842 sc-eQTL 6.09e-01 0.0471 0.0921 0.447 Treg L2
ENSG00000028839 TBPL1 -571989 sc-eQTL 1.28e-01 -0.146 0.0957 0.451 cDC L2
ENSG00000079950 STX7 866983 sc-eQTL 9.71e-01 0.00272 0.0756 0.451 cDC L2
ENSG00000093134 VNN3 645416 sc-eQTL 6.47e-02 -0.138 0.0744 0.451 cDC L2
ENSG00000112299 VNN1 666126 sc-eQTL 2.52e-01 -0.101 0.088 0.451 cDC L2
ENSG00000112303 VNN2 616722 sc-eQTL 5.70e-01 -0.049 0.086 0.451 cDC L2
ENSG00000112306 RPS12 565612 sc-eQTL 8.41e-01 -0.00851 0.0425 0.451 cDC L2
ENSG00000118515 SGK1 -937931 sc-eQTL 9.25e-01 -0.00671 0.0716 0.451 cDC L2
ENSG00000146409 SLC18B1 566842 sc-eQTL 2.93e-01 -0.0885 0.0839 0.451 cDC L2
ENSG00000286438 AL591115.1 277053 sc-eQTL 4.00e-01 -0.0566 0.0671 0.451 cDC L2
ENSG00000286887 AL355881.1 -916120 sc-eQTL 6.04e-01 0.043 0.0827 0.451 cDC L2
ENSG00000028839 TBPL1 -571989 sc-eQTL 5.08e-01 -0.05 0.0754 0.447 cMono_IL1B L2
ENSG00000079950 STX7 866983 sc-eQTL 4.17e-01 0.0464 0.0571 0.447 cMono_IL1B L2
ENSG00000093134 VNN3 645416 sc-eQTL 1.69e-01 -0.111 0.0805 0.447 cMono_IL1B L2
ENSG00000112299 VNN1 666126 sc-eQTL 6.93e-01 0.0322 0.0816 0.447 cMono_IL1B L2
ENSG00000112303 VNN2 616722 sc-eQTL 1.66e-01 -0.0902 0.065 0.447 cMono_IL1B L2
ENSG00000112306 RPS12 565612 sc-eQTL 2.65e-01 0.0404 0.0361 0.447 cMono_IL1B L2
ENSG00000118515 SGK1 -937931 sc-eQTL 8.88e-01 0.00761 0.0541 0.447 cMono_IL1B L2
ENSG00000146409 SLC18B1 566842 sc-eQTL 8.73e-01 0.0112 0.0699 0.447 cMono_IL1B L2
ENSG00000286887 AL355881.1 -916120 sc-eQTL 6.19e-01 0.0362 0.0728 0.447 cMono_IL1B L2
ENSG00000028839 TBPL1 -571989 sc-eQTL 8.86e-01 -0.0123 0.0857 0.447 cMono_S100A L2
ENSG00000079950 STX7 866983 sc-eQTL 2.04e-01 0.0786 0.0617 0.447 cMono_S100A L2
ENSG00000093134 VNN3 645416 sc-eQTL 2.10e-01 -0.097 0.0771 0.447 cMono_S100A L2
ENSG00000112299 VNN1 666126 sc-eQTL 7.76e-01 0.0239 0.084 0.447 cMono_S100A L2
ENSG00000112303 VNN2 616722 sc-eQTL 1.02e-01 -0.0898 0.0547 0.447 cMono_S100A L2
ENSG00000112306 RPS12 565612 sc-eQTL 1.42e-01 0.058 0.0394 0.447 cMono_S100A L2
ENSG00000118515 SGK1 -937931 sc-eQTL 5.74e-01 0.0255 0.0453 0.447 cMono_S100A L2
ENSG00000146409 SLC18B1 566842 sc-eQTL 8.65e-01 0.0125 0.0733 0.447 cMono_S100A L2
ENSG00000286887 AL355881.1 -916120 sc-eQTL 4.06e-01 0.0596 0.0716 0.447 cMono_S100A L2
ENSG00000028839 TBPL1 -571989 sc-eQTL 6.43e-01 0.0539 0.116 0.464 gdT L2
ENSG00000079950 STX7 866983 sc-eQTL 9.69e-01 -0.00392 0.0999 0.464 gdT L2
ENSG00000112303 VNN2 616722 sc-eQTL 1.30e-01 0.167 0.11 0.464 gdT L2
ENSG00000112306 RPS12 565612 sc-eQTL 6.33e-01 -0.0201 0.0421 0.464 gdT L2
ENSG00000118515 SGK1 -937931 sc-eQTL 3.27e-01 0.0779 0.0792 0.464 gdT L2
ENSG00000146409 SLC18B1 566842 sc-eQTL 6.24e-01 0.0534 0.109 0.464 gdT L2
ENSG00000028839 TBPL1 -571989 sc-eQTL 2.25e-01 -0.104 0.0852 0.444 intMono L2
ENSG00000079950 STX7 866983 sc-eQTL 1.27e-01 0.124 0.0812 0.444 intMono L2
ENSG00000093134 VNN3 645416 sc-eQTL 1.96e-03 -0.252 0.0805 0.444 intMono L2
ENSG00000112299 VNN1 666126 sc-eQTL 5.37e-01 0.0504 0.0814 0.444 intMono L2
ENSG00000112303 VNN2 616722 sc-eQTL 1.22e-01 -0.128 0.0823 0.444 intMono L2
ENSG00000112306 RPS12 565612 sc-eQTL 5.13e-01 0.0236 0.036 0.444 intMono L2
ENSG00000118515 SGK1 -937931 sc-eQTL 3.44e-01 0.0573 0.0604 0.444 intMono L2
ENSG00000146409 SLC18B1 566842 sc-eQTL 6.16e-01 0.044 0.0877 0.444 intMono L2
ENSG00000286887 AL355881.1 -916120 sc-eQTL 9.76e-02 0.139 0.0833 0.444 intMono L2
ENSG00000028839 TBPL1 -571989 sc-eQTL 8.73e-01 0.0146 0.0913 0.446 ncMono L2
ENSG00000079950 STX7 866983 sc-eQTL 9.17e-01 -0.00645 0.0617 0.446 ncMono L2
ENSG00000093134 VNN3 645416 sc-eQTL 2.51e-02 -0.194 0.086 0.446 ncMono L2
ENSG00000112299 VNN1 666126 sc-eQTL 7.71e-01 0.0252 0.0865 0.446 ncMono L2
ENSG00000112303 VNN2 616722 sc-eQTL 3.15e-01 -0.0835 0.0829 0.446 ncMono L2
ENSG00000112306 RPS12 565612 sc-eQTL 6.73e-01 0.0176 0.0417 0.446 ncMono L2
ENSG00000118515 SGK1 -937931 sc-eQTL 4.25e-01 0.0471 0.0589 0.446 ncMono L2
ENSG00000146409 SLC18B1 566842 sc-eQTL 5.83e-01 0.0404 0.0736 0.446 ncMono L2
ENSG00000286887 AL355881.1 -916120 sc-eQTL 5.46e-01 -0.0471 0.0778 0.446 ncMono L2
ENSG00000028839 TBPL1 -571989 sc-eQTL 8.05e-01 0.026 0.105 0.452 pDC L2
ENSG00000079950 STX7 866983 sc-eQTL 6.32e-01 -0.0337 0.0701 0.452 pDC L2
ENSG00000093134 VNN3 645416 sc-eQTL 4.29e-01 -0.0559 0.0705 0.452 pDC L2
ENSG00000112299 VNN1 666126 sc-eQTL 1.28e-01 -0.109 0.0713 0.452 pDC L2
ENSG00000112303 VNN2 616722 sc-eQTL 7.28e-02 -0.153 0.0847 0.452 pDC L2
ENSG00000112306 RPS12 565612 sc-eQTL 3.61e-01 0.0539 0.0588 0.452 pDC L2
ENSG00000118515 SGK1 -937931 sc-eQTL 4.03e-01 -0.0501 0.0597 0.452 pDC L2
ENSG00000146409 SLC18B1 566842 sc-eQTL 1.56e-01 0.123 0.0867 0.452 pDC L2
ENSG00000286438 AL591115.1 277053 sc-eQTL 4.19e-01 -0.0676 0.0833 0.452 pDC L2
ENSG00000286887 AL355881.1 -916120 sc-eQTL 6.88e-01 0.0298 0.074 0.452 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -571989 sc-eQTL 8.94e-01 -0.0121 0.0912 0.447 B_Memory LOneK1K
ENSG00000079931 MOXD1 978706 sc-eQTL 4.55e-02 -0.177 0.0878 0.447 B_Memory LOneK1K
ENSG00000079950 STX7 866983 sc-eQTL 7.82e-02 -0.0882 0.0498 0.447 B_Memory LOneK1K
ENSG00000112303 VNN2 616722 sc-eQTL 7.97e-02 -0.139 0.0788 0.447 B_Memory LOneK1K
ENSG00000112306 RPS12 565612 sc-eQTL 7.29e-01 -0.0157 0.0452 0.447 B_Memory LOneK1K
ENSG00000118515 SGK1 -937931 sc-eQTL 3.44e-01 0.0669 0.0706 0.447 B_Memory LOneK1K
ENSG00000146409 SLC18B1 566842 sc-eQTL 5.30e-01 0.0522 0.083 0.447 B_Memory LOneK1K
ENSG00000028839 TBPL1 -571989 sc-eQTL 2.66e-01 -0.0959 0.0859 0.447 B_Naive LOneK1K
ENSG00000079931 MOXD1 978706 sc-eQTL 5.38e-02 -0.182 0.0938 0.447 B_Naive LOneK1K
ENSG00000079950 STX7 866983 sc-eQTL 8.24e-01 -0.00865 0.0388 0.447 B_Naive LOneK1K
ENSG00000112303 VNN2 616722 sc-eQTL 7.95e-01 0.0196 0.0754 0.447 B_Naive LOneK1K
ENSG00000112306 RPS12 565612 sc-eQTL 2.27e-01 -0.055 0.0455 0.447 B_Naive LOneK1K
ENSG00000118515 SGK1 -937931 sc-eQTL 7.18e-01 -0.0256 0.0706 0.447 B_Naive LOneK1K
ENSG00000146409 SLC18B1 566842 sc-eQTL 2.28e-01 -0.104 0.0858 0.447 B_Naive LOneK1K
ENSG00000028839 TBPL1 -571989 sc-eQTL 5.88e-01 -0.0374 0.069 0.447 CD14_Mono LOneK1K
ENSG00000079950 STX7 866983 sc-eQTL 1.66e-01 0.0664 0.0478 0.447 CD14_Mono LOneK1K
ENSG00000093134 VNN3 645416 sc-eQTL 2.21e-01 -0.0958 0.078 0.447 CD14_Mono LOneK1K
ENSG00000112299 VNN1 666126 sc-eQTL 5.33e-01 0.051 0.0816 0.447 CD14_Mono LOneK1K
ENSG00000112303 VNN2 616722 sc-eQTL 3.04e-01 -0.0554 0.0538 0.447 CD14_Mono LOneK1K
ENSG00000112306 RPS12 565612 sc-eQTL 1.94e-01 0.0481 0.0369 0.447 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -937931 sc-eQTL 8.42e-01 0.0101 0.0504 0.447 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 566842 sc-eQTL 7.76e-01 0.0187 0.0658 0.447 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -916120 sc-eQTL 7.48e-01 0.0222 0.069 0.447 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -571989 sc-eQTL 5.82e-01 -0.0485 0.088 0.444 CD16_Mono LOneK1K
ENSG00000079950 STX7 866983 sc-eQTL 3.94e-01 0.0496 0.058 0.444 CD16_Mono LOneK1K
ENSG00000093134 VNN3 645416 sc-eQTL 2.42e-03 -0.257 0.0836 0.444 CD16_Mono LOneK1K
ENSG00000112299 VNN1 666126 sc-eQTL 9.19e-01 0.00859 0.0847 0.444 CD16_Mono LOneK1K
ENSG00000112303 VNN2 616722 sc-eQTL 1.18e-01 -0.125 0.0794 0.444 CD16_Mono LOneK1K
ENSG00000112306 RPS12 565612 sc-eQTL 7.23e-01 0.012 0.0339 0.444 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -937931 sc-eQTL 3.35e-01 0.0495 0.0512 0.444 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 566842 sc-eQTL 6.40e-01 0.0385 0.0822 0.444 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -916120 sc-eQTL 1.91e-01 0.0971 0.0741 0.444 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -571989 sc-eQTL 9.85e-01 -0.0014 0.0732 0.442 NK_CD56dim LOneK1K
ENSG00000079950 STX7 866983 sc-eQTL 4.72e-01 -0.0495 0.0687 0.442 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 616722 sc-eQTL 8.95e-01 -0.0115 0.0871 0.442 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 565612 sc-eQTL 9.48e-01 0.00233 0.0355 0.442 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -937931 sc-eQTL 7.41e-01 0.0243 0.0734 0.442 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000093134 VNN3 645416 eQTL 0.0288 -0.0318 0.0145 0.0 0.0 0.456

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000093134 VNN3 645416 3.92e-07 2.17e-07 7.92e-08 2.41e-07 1.07e-07 1.13e-07 2.95e-07 7.65e-08 2.12e-07 1.28e-07 2.38e-07 1.91e-07 3.18e-07 8.54e-08 8.45e-08 1.14e-07 8.64e-08 2.75e-07 8.68e-08 7.83e-08 1.35e-07 2.07e-07 2e-07 4.34e-08 2.86e-07 1.86e-07 1.48e-07 1.48e-07 1.58e-07 1.81e-07 1.43e-07 5.24e-08 4.87e-08 9.81e-08 1.01e-07 4.95e-08 6.14e-08 6.11e-08 5.59e-08 8.06e-08 5.09e-08 1.79e-07 3.2e-08 1.08e-08 5.4e-08 1.03e-08 9.26e-08 0.0 4.52e-08