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Genes within 1Mb (chr6:133369928:C:CTGCTGA):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -582242 sc-eQTL 6.59e-01 -0.0475 0.108 0.75 B L1
ENSG00000079931 MOXD1 968453 sc-eQTL 9.44e-01 -0.00794 0.114 0.75 B L1
ENSG00000079950 STX7 856730 sc-eQTL 8.65e-01 0.0073 0.0428 0.75 B L1
ENSG00000112303 VNN2 606469 sc-eQTL 7.27e-01 -0.0281 0.0805 0.75 B L1
ENSG00000112306 RPS12 555359 sc-eQTL 4.85e-01 0.0341 0.0486 0.75 B L1
ENSG00000118515 SGK1 -948184 sc-eQTL 5.18e-01 -0.0486 0.075 0.75 B L1
ENSG00000146409 SLC18B1 556589 sc-eQTL 9.97e-01 0.000364 0.103 0.75 B L1
ENSG00000028839 TBPL1 -582242 sc-eQTL 4.30e-01 0.0631 0.0797 0.75 CD4T L1
ENSG00000079950 STX7 856730 sc-eQTL 5.32e-01 0.0518 0.0829 0.75 CD4T L1
ENSG00000112303 VNN2 606469 sc-eQTL 8.14e-01 -0.017 0.0718 0.75 CD4T L1
ENSG00000112306 RPS12 555359 sc-eQTL 3.53e-01 0.0454 0.0488 0.75 CD4T L1
ENSG00000118515 SGK1 -948184 sc-eQTL 6.18e-01 -0.0328 0.0656 0.75 CD4T L1
ENSG00000146409 SLC18B1 556589 sc-eQTL 2.19e-01 -0.121 0.0985 0.75 CD4T L1
ENSG00000028839 TBPL1 -582242 sc-eQTL 5.61e-01 0.0458 0.0788 0.75 CD8T L1
ENSG00000079950 STX7 856730 sc-eQTL 2.20e-01 -0.101 0.082 0.75 CD8T L1
ENSG00000112303 VNN2 606469 sc-eQTL 7.20e-01 0.0344 0.0961 0.75 CD8T L1
ENSG00000112306 RPS12 555359 sc-eQTL 8.87e-01 -0.00468 0.0328 0.75 CD8T L1
ENSG00000118515 SGK1 -948184 sc-eQTL 7.48e-01 0.0163 0.0506 0.75 CD8T L1
ENSG00000146409 SLC18B1 556589 sc-eQTL 7.01e-01 -0.0382 0.0993 0.75 CD8T L1
ENSG00000028839 TBPL1 -582242 sc-eQTL 8.97e-01 -0.0158 0.122 0.745 DC L1
ENSG00000079950 STX7 856730 sc-eQTL 7.74e-01 0.0217 0.0755 0.745 DC L1
ENSG00000093134 VNN3 635163 sc-eQTL 5.94e-01 -0.05 0.0936 0.745 DC L1
ENSG00000112299 VNN1 655873 sc-eQTL 2.15e-01 -0.125 0.101 0.745 DC L1
ENSG00000112303 VNN2 606469 sc-eQTL 7.77e-01 -0.0306 0.108 0.745 DC L1
ENSG00000112306 RPS12 555359 sc-eQTL 7.78e-01 0.0171 0.0606 0.745 DC L1
ENSG00000118515 SGK1 -948184 sc-eQTL 2.86e-02 -0.153 0.0695 0.745 DC L1
ENSG00000146409 SLC18B1 556589 sc-eQTL 9.19e-01 -0.00974 0.096 0.745 DC L1
ENSG00000286438 AL591115.1 266800 sc-eQTL 2.97e-01 -0.091 0.0871 0.745 DC L1
ENSG00000286887 AL355881.1 -926373 sc-eQTL 9.76e-01 0.00325 0.109 0.745 DC L1
ENSG00000028839 TBPL1 -582242 sc-eQTL 8.96e-01 -0.011 0.0838 0.75 Mono L1
ENSG00000079950 STX7 856730 sc-eQTL 9.45e-02 0.0935 0.0557 0.75 Mono L1
ENSG00000093134 VNN3 635163 sc-eQTL 9.87e-01 -0.00155 0.0962 0.75 Mono L1
ENSG00000112299 VNN1 655873 sc-eQTL 6.87e-01 0.0418 0.103 0.75 Mono L1
ENSG00000112303 VNN2 606469 sc-eQTL 3.33e-02 -0.155 0.0723 0.75 Mono L1
ENSG00000112306 RPS12 555359 sc-eQTL 4.27e-01 0.0348 0.0437 0.75 Mono L1
ENSG00000118515 SGK1 -948184 sc-eQTL 6.52e-01 -0.0279 0.0618 0.75 Mono L1
ENSG00000146409 SLC18B1 556589 sc-eQTL 9.12e-01 -0.00955 0.0866 0.75 Mono L1
ENSG00000286887 AL355881.1 -926373 sc-eQTL 1.63e-01 -0.119 0.0847 0.75 Mono L1
ENSG00000028839 TBPL1 -582242 sc-eQTL 6.15e-01 0.0461 0.0917 0.749 NK L1
ENSG00000079950 STX7 856730 sc-eQTL 4.12e-01 0.0696 0.0848 0.749 NK L1
ENSG00000112303 VNN2 606469 sc-eQTL 6.96e-01 0.0413 0.106 0.749 NK L1
ENSG00000112306 RPS12 555359 sc-eQTL 4.42e-01 -0.0336 0.0437 0.749 NK L1
ENSG00000118515 SGK1 -948184 sc-eQTL 7.31e-01 -0.0278 0.0808 0.749 NK L1
ENSG00000028839 TBPL1 -582242 sc-eQTL 4.50e-01 -0.082 0.108 0.75 Other_T L1
ENSG00000079950 STX7 856730 sc-eQTL 7.34e-01 -0.0291 0.0853 0.75 Other_T L1
ENSG00000112303 VNN2 606469 sc-eQTL 7.47e-01 0.0333 0.103 0.75 Other_T L1
ENSG00000112306 RPS12 555359 sc-eQTL 5.98e-01 0.0216 0.0409 0.75 Other_T L1
ENSG00000118515 SGK1 -948184 sc-eQTL 8.01e-01 -0.019 0.0753 0.75 Other_T L1
ENSG00000146409 SLC18B1 556589 sc-eQTL 7.60e-01 0.0343 0.112 0.75 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -582242 sc-eQTL 9.50e-01 -0.00789 0.127 0.747 B_Activated L2
ENSG00000079931 MOXD1 968453 sc-eQTL 4.25e-01 0.0924 0.116 0.747 B_Activated L2
ENSG00000079950 STX7 856730 sc-eQTL 5.20e-01 -0.0699 0.108 0.747 B_Activated L2
ENSG00000112303 VNN2 606469 sc-eQTL 8.55e-01 0.0211 0.115 0.747 B_Activated L2
ENSG00000112306 RPS12 555359 sc-eQTL 9.57e-01 -0.00333 0.0619 0.747 B_Activated L2
ENSG00000118515 SGK1 -948184 sc-eQTL 7.13e-01 -0.0406 0.11 0.747 B_Activated L2
ENSG00000146409 SLC18B1 556589 sc-eQTL 5.90e-01 0.0585 0.108 0.747 B_Activated L2
ENSG00000028839 TBPL1 -582242 sc-eQTL 1.30e-01 0.181 0.119 0.749 B_Intermediate L2
ENSG00000079931 MOXD1 968453 sc-eQTL 5.66e-01 0.0605 0.105 0.749 B_Intermediate L2
ENSG00000079950 STX7 856730 sc-eQTL 8.41e-01 0.0138 0.0689 0.749 B_Intermediate L2
ENSG00000112303 VNN2 606469 sc-eQTL 7.45e-01 -0.0338 0.104 0.749 B_Intermediate L2
ENSG00000112306 RPS12 555359 sc-eQTL 4.63e-01 0.0467 0.0634 0.749 B_Intermediate L2
ENSG00000118515 SGK1 -948184 sc-eQTL 1.41e-01 0.162 0.109 0.749 B_Intermediate L2
ENSG00000146409 SLC18B1 556589 sc-eQTL 6.12e-01 -0.0581 0.114 0.749 B_Intermediate L2
ENSG00000028839 TBPL1 -582242 sc-eQTL 6.89e-01 -0.0462 0.115 0.75 B_Memory L2
ENSG00000079931 MOXD1 968453 sc-eQTL 3.61e-01 -0.097 0.106 0.75 B_Memory L2
ENSG00000079950 STX7 856730 sc-eQTL 3.36e-01 0.0802 0.0831 0.75 B_Memory L2
ENSG00000112303 VNN2 606469 sc-eQTL 7.14e-01 -0.04 0.109 0.75 B_Memory L2
ENSG00000112306 RPS12 555359 sc-eQTL 8.12e-01 -0.0125 0.0525 0.75 B_Memory L2
ENSG00000118515 SGK1 -948184 sc-eQTL 2.17e-01 0.119 0.096 0.75 B_Memory L2
ENSG00000146409 SLC18B1 556589 sc-eQTL 2.22e-02 0.249 0.108 0.75 B_Memory L2
ENSG00000028839 TBPL1 -582242 sc-eQTL 9.20e-01 -0.0107 0.107 0.75 B_Naive1 L2
ENSG00000079931 MOXD1 968453 sc-eQTL 8.80e-01 -0.0178 0.117 0.75 B_Naive1 L2
ENSG00000079950 STX7 856730 sc-eQTL 6.58e-01 0.0228 0.0513 0.75 B_Naive1 L2
ENSG00000112303 VNN2 606469 sc-eQTL 6.99e-01 0.0387 0.0997 0.75 B_Naive1 L2
ENSG00000112306 RPS12 555359 sc-eQTL 6.60e-01 0.025 0.0568 0.75 B_Naive1 L2
ENSG00000118515 SGK1 -948184 sc-eQTL 3.60e-01 -0.0814 0.0887 0.75 B_Naive1 L2
ENSG00000146409 SLC18B1 556589 sc-eQTL 9.71e-01 -0.00405 0.11 0.75 B_Naive1 L2
ENSG00000028839 TBPL1 -582242 sc-eQTL 2.61e-02 -0.253 0.113 0.751 B_Naive2 L2
ENSG00000079931 MOXD1 968453 sc-eQTL 1.17e-01 -0.174 0.111 0.751 B_Naive2 L2
ENSG00000079950 STX7 856730 sc-eQTL 9.33e-01 0.00507 0.0606 0.751 B_Naive2 L2
ENSG00000112303 VNN2 606469 sc-eQTL 7.93e-01 -0.0292 0.111 0.751 B_Naive2 L2
ENSG00000112306 RPS12 555359 sc-eQTL 4.75e-01 0.0421 0.0588 0.751 B_Naive2 L2
ENSG00000118515 SGK1 -948184 sc-eQTL 8.75e-01 -0.0164 0.104 0.751 B_Naive2 L2
ENSG00000146409 SLC18B1 556589 sc-eQTL 2.68e-01 -0.124 0.112 0.751 B_Naive2 L2
ENSG00000028839 TBPL1 -582242 sc-eQTL 5.48e-01 -0.0688 0.114 0.75 CD4_CTL L2
ENSG00000079950 STX7 856730 sc-eQTL 8.33e-01 0.024 0.114 0.75 CD4_CTL L2
ENSG00000112303 VNN2 606469 sc-eQTL 5.62e-01 0.0666 0.115 0.75 CD4_CTL L2
ENSG00000112306 RPS12 555359 sc-eQTL 8.06e-01 0.013 0.053 0.75 CD4_CTL L2
ENSG00000118515 SGK1 -948184 sc-eQTL 7.18e-02 0.165 0.0911 0.75 CD4_CTL L2
ENSG00000146409 SLC18B1 556589 sc-eQTL 2.78e-01 -0.116 0.106 0.75 CD4_CTL L2
ENSG00000028839 TBPL1 -582242 sc-eQTL 1.96e-01 -0.118 0.0912 0.75 CD4_Naive L2
ENSG00000079950 STX7 856730 sc-eQTL 9.27e-01 0.00825 0.0898 0.75 CD4_Naive L2
ENSG00000112303 VNN2 606469 sc-eQTL 6.36e-01 -0.0394 0.0832 0.75 CD4_Naive L2
ENSG00000112306 RPS12 555359 sc-eQTL 4.69e-01 0.0391 0.0539 0.75 CD4_Naive L2
ENSG00000118515 SGK1 -948184 sc-eQTL 6.88e-01 -0.0266 0.0661 0.75 CD4_Naive L2
ENSG00000146409 SLC18B1 556589 sc-eQTL 1.04e-01 -0.169 0.103 0.75 CD4_Naive L2
ENSG00000028839 TBPL1 -582242 sc-eQTL 8.53e-02 0.169 0.0975 0.75 CD4_TCM L2
ENSG00000079950 STX7 856730 sc-eQTL 1.90e-01 0.129 0.0985 0.75 CD4_TCM L2
ENSG00000112303 VNN2 606469 sc-eQTL 8.58e-01 -0.0175 0.0975 0.75 CD4_TCM L2
ENSG00000112306 RPS12 555359 sc-eQTL 9.46e-01 0.0034 0.0505 0.75 CD4_TCM L2
ENSG00000118515 SGK1 -948184 sc-eQTL 3.48e-01 -0.0664 0.0706 0.75 CD4_TCM L2
ENSG00000146409 SLC18B1 556589 sc-eQTL 7.47e-01 0.0378 0.117 0.75 CD4_TCM L2
ENSG00000028839 TBPL1 -582242 sc-eQTL 1.08e-01 0.19 0.117 0.75 CD4_TEM L2
ENSG00000079950 STX7 856730 sc-eQTL 7.94e-02 -0.207 0.117 0.75 CD4_TEM L2
ENSG00000112303 VNN2 606469 sc-eQTL 3.24e-01 0.112 0.113 0.75 CD4_TEM L2
ENSG00000112306 RPS12 555359 sc-eQTL 4.38e-01 0.0361 0.0464 0.75 CD4_TEM L2
ENSG00000118515 SGK1 -948184 sc-eQTL 9.48e-01 0.00519 0.0799 0.75 CD4_TEM L2
ENSG00000146409 SLC18B1 556589 sc-eQTL 2.85e-01 0.123 0.115 0.75 CD4_TEM L2
ENSG00000028839 TBPL1 -582242 sc-eQTL 8.59e-01 -0.0181 0.101 0.75 CD8_CTL L2
ENSG00000079950 STX7 856730 sc-eQTL 2.78e-01 -0.103 0.0945 0.75 CD8_CTL L2
ENSG00000112303 VNN2 606469 sc-eQTL 4.92e-01 0.0739 0.108 0.75 CD8_CTL L2
ENSG00000112306 RPS12 555359 sc-eQTL 5.34e-01 -0.0358 0.0575 0.75 CD8_CTL L2
ENSG00000118515 SGK1 -948184 sc-eQTL 7.56e-01 -0.0302 0.0973 0.75 CD8_CTL L2
ENSG00000146409 SLC18B1 556589 sc-eQTL 2.90e-01 -0.118 0.111 0.75 CD8_CTL L2
ENSG00000028839 TBPL1 -582242 sc-eQTL 5.13e-01 0.0702 0.107 0.75 CD8_Naive L2
ENSG00000079950 STX7 856730 sc-eQTL 5.56e-01 -0.0673 0.114 0.75 CD8_Naive L2
ENSG00000112303 VNN2 606469 sc-eQTL 6.03e-01 -0.0513 0.0985 0.75 CD8_Naive L2
ENSG00000112306 RPS12 555359 sc-eQTL 4.22e-01 0.0453 0.0563 0.75 CD8_Naive L2
ENSG00000118515 SGK1 -948184 sc-eQTL 7.93e-01 -0.0186 0.0708 0.75 CD8_Naive L2
ENSG00000146409 SLC18B1 556589 sc-eQTL 5.92e-01 -0.0607 0.113 0.75 CD8_Naive L2
ENSG00000028839 TBPL1 -582242 sc-eQTL 2.58e-01 -0.138 0.122 0.745 CD8_TCM L2
ENSG00000079950 STX7 856730 sc-eQTL 1.03e-01 0.184 0.112 0.745 CD8_TCM L2
ENSG00000112303 VNN2 606469 sc-eQTL 3.05e-01 -0.115 0.112 0.745 CD8_TCM L2
ENSG00000112306 RPS12 555359 sc-eQTL 9.89e-02 0.0902 0.0544 0.745 CD8_TCM L2
ENSG00000118515 SGK1 -948184 sc-eQTL 4.59e-01 -0.0672 0.0906 0.745 CD8_TCM L2
ENSG00000146409 SLC18B1 556589 sc-eQTL 9.49e-02 -0.2 0.119 0.745 CD8_TCM L2
ENSG00000028839 TBPL1 -582242 sc-eQTL 5.87e-02 0.209 0.11 0.753 CD8_TEM L2
ENSG00000079950 STX7 856730 sc-eQTL 3.34e-01 0.117 0.121 0.753 CD8_TEM L2
ENSG00000112303 VNN2 606469 sc-eQTL 5.57e-01 0.0708 0.12 0.753 CD8_TEM L2
ENSG00000112306 RPS12 555359 sc-eQTL 9.35e-01 -0.00528 0.0649 0.753 CD8_TEM L2
ENSG00000118515 SGK1 -948184 sc-eQTL 4.88e-01 -0.0737 0.106 0.753 CD8_TEM L2
ENSG00000146409 SLC18B1 556589 sc-eQTL 1.28e-01 0.186 0.122 0.753 CD8_TEM L2
ENSG00000028839 TBPL1 -582242 sc-eQTL 1.57e-01 -0.164 0.116 0.753 MAIT L2
ENSG00000079950 STX7 856730 sc-eQTL 7.88e-01 0.0298 0.111 0.753 MAIT L2
ENSG00000112303 VNN2 606469 sc-eQTL 2.86e-01 -0.12 0.112 0.753 MAIT L2
ENSG00000112306 RPS12 555359 sc-eQTL 5.75e-01 0.031 0.0553 0.753 MAIT L2
ENSG00000118515 SGK1 -948184 sc-eQTL 6.68e-01 0.0335 0.0778 0.753 MAIT L2
ENSG00000146409 SLC18B1 556589 sc-eQTL 7.21e-01 -0.0414 0.116 0.753 MAIT L2
ENSG00000028839 TBPL1 -582242 sc-eQTL 5.28e-01 0.0763 0.121 0.751 NK_CD56bright L2
ENSG00000079950 STX7 856730 sc-eQTL 4.29e-01 -0.0888 0.112 0.751 NK_CD56bright L2
ENSG00000112303 VNN2 606469 sc-eQTL 2.79e-01 -0.123 0.114 0.751 NK_CD56bright L2
ENSG00000112306 RPS12 555359 sc-eQTL 5.83e-01 -0.0348 0.0634 0.751 NK_CD56bright L2
ENSG00000118515 SGK1 -948184 sc-eQTL 6.60e-01 0.0418 0.0948 0.751 NK_CD56bright L2
ENSG00000028839 TBPL1 -582242 sc-eQTL 6.81e-01 -0.0406 0.0987 0.748 NK_CD56dim L2
ENSG00000079950 STX7 856730 sc-eQTL 5.73e-01 0.051 0.0903 0.748 NK_CD56dim L2
ENSG00000112303 VNN2 606469 sc-eQTL 3.31e-01 0.11 0.113 0.748 NK_CD56dim L2
ENSG00000112306 RPS12 555359 sc-eQTL 2.15e-01 -0.0556 0.0447 0.748 NK_CD56dim L2
ENSG00000118515 SGK1 -948184 sc-eQTL 8.50e-01 -0.0189 0.0994 0.748 NK_CD56dim L2
ENSG00000028839 TBPL1 -582242 sc-eQTL 9.71e-01 0.00445 0.122 0.751 NK_HLA L2
ENSG00000079950 STX7 856730 sc-eQTL 5.39e-01 0.0681 0.111 0.751 NK_HLA L2
ENSG00000112303 VNN2 606469 sc-eQTL 8.97e-01 -0.0146 0.112 0.751 NK_HLA L2
ENSG00000112306 RPS12 555359 sc-eQTL 3.70e-01 -0.0469 0.0522 0.751 NK_HLA L2
ENSG00000118515 SGK1 -948184 sc-eQTL 8.75e-01 0.0163 0.103 0.751 NK_HLA L2
ENSG00000028839 TBPL1 -582242 sc-eQTL 6.57e-01 0.0454 0.102 0.748 NK_cytokine L2
ENSG00000079950 STX7 856730 sc-eQTL 9.78e-01 0.00274 0.099 0.748 NK_cytokine L2
ENSG00000112303 VNN2 606469 sc-eQTL 4.37e-01 0.0865 0.111 0.748 NK_cytokine L2
ENSG00000112306 RPS12 555359 sc-eQTL 9.44e-01 0.00426 0.0604 0.748 NK_cytokine L2
ENSG00000118515 SGK1 -948184 sc-eQTL 8.16e-02 -0.175 0.0998 0.748 NK_cytokine L2
ENSG00000028839 TBPL1 -582242 sc-eQTL 7.26e-01 -0.0503 0.143 0.756 PB L2
ENSG00000079931 MOXD1 968453 sc-eQTL 6.63e-01 -0.0533 0.122 0.756 PB L2
ENSG00000079950 STX7 856730 sc-eQTL 7.60e-01 0.0312 0.102 0.756 PB L2
ENSG00000112303 VNN2 606469 sc-eQTL 5.40e-01 0.0764 0.124 0.756 PB L2
ENSG00000112306 RPS12 555359 sc-eQTL 9.50e-01 0.00445 0.0707 0.756 PB L2
ENSG00000118515 SGK1 -948184 sc-eQTL 7.70e-01 0.0334 0.114 0.756 PB L2
ENSG00000146409 SLC18B1 556589 sc-eQTL 5.90e-01 0.0715 0.132 0.756 PB L2
ENSG00000028839 TBPL1 -582242 sc-eQTL 1.85e-01 0.151 0.114 0.754 Pro_T L2
ENSG00000079950 STX7 856730 sc-eQTL 7.42e-01 -0.0336 0.102 0.754 Pro_T L2
ENSG00000112303 VNN2 606469 sc-eQTL 7.21e-01 0.0392 0.11 0.754 Pro_T L2
ENSG00000112306 RPS12 555359 sc-eQTL 6.38e-01 -0.0195 0.0414 0.754 Pro_T L2
ENSG00000118515 SGK1 -948184 sc-eQTL 9.84e-01 -0.0017 0.0831 0.754 Pro_T L2
ENSG00000146409 SLC18B1 556589 sc-eQTL 3.87e-01 0.0929 0.107 0.754 Pro_T L2
ENSG00000028839 TBPL1 -582242 sc-eQTL 3.63e-01 0.107 0.117 0.75 Treg L2
ENSG00000079950 STX7 856730 sc-eQTL 8.50e-01 -0.0209 0.111 0.75 Treg L2
ENSG00000112303 VNN2 606469 sc-eQTL 5.85e-01 -0.0509 0.093 0.75 Treg L2
ENSG00000112306 RPS12 555359 sc-eQTL 4.67e-01 0.03 0.0411 0.75 Treg L2
ENSG00000118515 SGK1 -948184 sc-eQTL 4.76e-01 0.0619 0.0867 0.75 Treg L2
ENSG00000146409 SLC18B1 556589 sc-eQTL 2.27e-01 0.14 0.116 0.75 Treg L2
ENSG00000028839 TBPL1 -582242 sc-eQTL 2.50e-01 -0.144 0.125 0.741 cDC L2
ENSG00000079950 STX7 856730 sc-eQTL 9.81e-01 -0.00234 0.0982 0.741 cDC L2
ENSG00000093134 VNN3 635163 sc-eQTL 2.95e-01 -0.102 0.0972 0.741 cDC L2
ENSG00000112299 VNN1 655873 sc-eQTL 5.56e-01 -0.0675 0.115 0.741 cDC L2
ENSG00000112303 VNN2 606469 sc-eQTL 6.80e-01 0.0461 0.112 0.741 cDC L2
ENSG00000112306 RPS12 555359 sc-eQTL 5.90e-01 -0.0298 0.0551 0.741 cDC L2
ENSG00000118515 SGK1 -948184 sc-eQTL 7.78e-02 -0.163 0.0921 0.741 cDC L2
ENSG00000146409 SLC18B1 556589 sc-eQTL 5.47e-01 -0.0658 0.109 0.741 cDC L2
ENSG00000286438 AL591115.1 266800 sc-eQTL 4.08e-01 -0.0723 0.0871 0.741 cDC L2
ENSG00000286887 AL355881.1 -926373 sc-eQTL 6.07e-01 -0.0552 0.107 0.741 cDC L2
ENSG00000028839 TBPL1 -582242 sc-eQTL 4.20e-01 -0.0768 0.0952 0.75 cMono_IL1B L2
ENSG00000079950 STX7 856730 sc-eQTL 1.18e-01 0.113 0.0719 0.75 cMono_IL1B L2
ENSG00000093134 VNN3 635163 sc-eQTL 9.91e-01 0.00112 0.102 0.75 cMono_IL1B L2
ENSG00000112299 VNN1 655873 sc-eQTL 9.31e-01 -0.00894 0.103 0.75 cMono_IL1B L2
ENSG00000112303 VNN2 606469 sc-eQTL 3.12e-01 -0.0835 0.0823 0.75 cMono_IL1B L2
ENSG00000112306 RPS12 555359 sc-eQTL 8.07e-01 0.0112 0.0458 0.75 cMono_IL1B L2
ENSG00000118515 SGK1 -948184 sc-eQTL 2.76e-01 -0.0744 0.0681 0.75 cMono_IL1B L2
ENSG00000146409 SLC18B1 556589 sc-eQTL 4.93e-01 -0.0606 0.0883 0.75 cMono_IL1B L2
ENSG00000286887 AL355881.1 -926373 sc-eQTL 6.93e-02 -0.167 0.0913 0.75 cMono_IL1B L2
ENSG00000028839 TBPL1 -582242 sc-eQTL 9.88e-01 -0.00168 0.108 0.75 cMono_S100A L2
ENSG00000079950 STX7 856730 sc-eQTL 2.13e-01 0.0973 0.0778 0.75 cMono_S100A L2
ENSG00000093134 VNN3 635163 sc-eQTL 5.85e-01 0.0534 0.0974 0.75 cMono_S100A L2
ENSG00000112299 VNN1 655873 sc-eQTL 3.45e-01 0.1 0.106 0.75 cMono_S100A L2
ENSG00000112303 VNN2 606469 sc-eQTL 3.53e-02 -0.145 0.0686 0.75 cMono_S100A L2
ENSG00000112306 RPS12 555359 sc-eQTL 7.16e-01 0.0182 0.0499 0.75 cMono_S100A L2
ENSG00000118515 SGK1 -948184 sc-eQTL 6.32e-01 -0.0273 0.0571 0.75 cMono_S100A L2
ENSG00000146409 SLC18B1 556589 sc-eQTL 8.47e-01 -0.0178 0.0924 0.75 cMono_S100A L2
ENSG00000286887 AL355881.1 -926373 sc-eQTL 1.06e-01 -0.146 0.0898 0.75 cMono_S100A L2
ENSG00000028839 TBPL1 -582242 sc-eQTL 4.19e-01 -0.121 0.15 0.755 gdT L2
ENSG00000079950 STX7 856730 sc-eQTL 7.90e-01 0.0343 0.129 0.755 gdT L2
ENSG00000112303 VNN2 606469 sc-eQTL 6.60e-01 0.0629 0.143 0.755 gdT L2
ENSG00000112306 RPS12 555359 sc-eQTL 5.10e-01 -0.0358 0.0542 0.755 gdT L2
ENSG00000118515 SGK1 -948184 sc-eQTL 6.71e-01 0.0436 0.102 0.755 gdT L2
ENSG00000146409 SLC18B1 556589 sc-eQTL 5.60e-01 0.0818 0.14 0.755 gdT L2
ENSG00000028839 TBPL1 -582242 sc-eQTL 2.78e-01 -0.119 0.11 0.742 intMono L2
ENSG00000079950 STX7 856730 sc-eQTL 3.30e-02 0.223 0.104 0.742 intMono L2
ENSG00000093134 VNN3 635163 sc-eQTL 4.98e-01 -0.0719 0.106 0.742 intMono L2
ENSG00000112299 VNN1 655873 sc-eQTL 3.04e-02 0.226 0.104 0.742 intMono L2
ENSG00000112303 VNN2 606469 sc-eQTL 5.68e-01 -0.0608 0.106 0.742 intMono L2
ENSG00000112306 RPS12 555359 sc-eQTL 4.51e-01 -0.035 0.0462 0.742 intMono L2
ENSG00000118515 SGK1 -948184 sc-eQTL 7.83e-01 0.0214 0.0778 0.742 intMono L2
ENSG00000146409 SLC18B1 556589 sc-eQTL 2.83e-01 -0.121 0.112 0.742 intMono L2
ENSG00000286887 AL355881.1 -926373 sc-eQTL 4.88e-01 0.0747 0.108 0.742 intMono L2
ENSG00000028839 TBPL1 -582242 sc-eQTL 5.22e-02 0.223 0.114 0.744 ncMono L2
ENSG00000079950 STX7 856730 sc-eQTL 2.64e-01 -0.0871 0.0777 0.744 ncMono L2
ENSG00000093134 VNN3 635163 sc-eQTL 7.57e-03 -0.292 0.108 0.744 ncMono L2
ENSG00000112299 VNN1 655873 sc-eQTL 1.79e-01 -0.147 0.109 0.744 ncMono L2
ENSG00000112303 VNN2 606469 sc-eQTL 8.63e-01 0.0181 0.105 0.744 ncMono L2
ENSG00000112306 RPS12 555359 sc-eQTL 9.80e-01 0.00133 0.0527 0.744 ncMono L2
ENSG00000118515 SGK1 -948184 sc-eQTL 8.95e-01 -0.00986 0.0745 0.744 ncMono L2
ENSG00000146409 SLC18B1 556589 sc-eQTL 8.70e-01 -0.0152 0.093 0.744 ncMono L2
ENSG00000286887 AL355881.1 -926373 sc-eQTL 5.45e-01 -0.0595 0.0982 0.744 ncMono L2
ENSG00000028839 TBPL1 -582242 sc-eQTL 9.72e-01 -0.00472 0.136 0.737 pDC L2
ENSG00000079950 STX7 856730 sc-eQTL 8.78e-01 0.0139 0.0903 0.737 pDC L2
ENSG00000093134 VNN3 635163 sc-eQTL 9.62e-01 -0.00433 0.0909 0.737 pDC L2
ENSG00000112299 VNN1 655873 sc-eQTL 3.09e-01 -0.0941 0.0922 0.737 pDC L2
ENSG00000112303 VNN2 606469 sc-eQTL 8.40e-01 0.0223 0.11 0.737 pDC L2
ENSG00000112306 RPS12 555359 sc-eQTL 4.54e-01 -0.0569 0.0758 0.737 pDC L2
ENSG00000118515 SGK1 -948184 sc-eQTL 8.22e-02 -0.134 0.0764 0.737 pDC L2
ENSG00000146409 SLC18B1 556589 sc-eQTL 9.08e-01 0.0129 0.112 0.737 pDC L2
ENSG00000286438 AL591115.1 266800 sc-eQTL 3.77e-01 -0.095 0.107 0.737 pDC L2
ENSG00000286887 AL355881.1 -926373 sc-eQTL 9.79e-01 0.00253 0.0953 0.737 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -582242 sc-eQTL 2.85e-01 0.123 0.115 0.75 B_Memory LOneK1K
ENSG00000079931 MOXD1 968453 sc-eQTL 7.03e-01 -0.0426 0.112 0.75 B_Memory LOneK1K
ENSG00000079950 STX7 856730 sc-eQTL 2.74e-01 0.0692 0.0631 0.75 B_Memory LOneK1K
ENSG00000112303 VNN2 606469 sc-eQTL 8.16e-01 0.0233 0.1 0.75 B_Memory LOneK1K
ENSG00000112306 RPS12 555359 sc-eQTL 8.29e-01 0.0123 0.057 0.75 B_Memory LOneK1K
ENSG00000118515 SGK1 -948184 sc-eQTL 2.80e-01 0.0964 0.0889 0.75 B_Memory LOneK1K
ENSG00000146409 SLC18B1 556589 sc-eQTL 8.87e-01 0.0149 0.105 0.75 B_Memory LOneK1K
ENSG00000028839 TBPL1 -582242 sc-eQTL 1.57e-01 -0.151 0.106 0.75 B_Naive LOneK1K
ENSG00000079931 MOXD1 968453 sc-eQTL 6.73e-01 -0.0495 0.117 0.75 B_Naive LOneK1K
ENSG00000079950 STX7 856730 sc-eQTL 6.51e-01 0.0218 0.0481 0.75 B_Naive LOneK1K
ENSG00000112303 VNN2 606469 sc-eQTL 9.08e-01 -0.0109 0.0935 0.75 B_Naive LOneK1K
ENSG00000112306 RPS12 555359 sc-eQTL 6.15e-01 0.0284 0.0565 0.75 B_Naive LOneK1K
ENSG00000118515 SGK1 -948184 sc-eQTL 3.15e-01 -0.088 0.0874 0.75 B_Naive LOneK1K
ENSG00000146409 SLC18B1 556589 sc-eQTL 6.05e-01 -0.0553 0.107 0.75 B_Naive LOneK1K
ENSG00000028839 TBPL1 -582242 sc-eQTL 4.77e-01 -0.0615 0.0864 0.75 CD14_Mono LOneK1K
ENSG00000079950 STX7 856730 sc-eQTL 5.74e-02 0.114 0.0596 0.75 CD14_Mono LOneK1K
ENSG00000093134 VNN3 635163 sc-eQTL 8.41e-01 0.0197 0.098 0.75 CD14_Mono LOneK1K
ENSG00000112299 VNN1 655873 sc-eQTL 5.85e-01 0.0558 0.102 0.75 CD14_Mono LOneK1K
ENSG00000112303 VNN2 606469 sc-eQTL 1.18e-01 -0.106 0.0672 0.75 CD14_Mono LOneK1K
ENSG00000112306 RPS12 555359 sc-eQTL 8.68e-01 0.00774 0.0463 0.75 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -948184 sc-eQTL 3.43e-01 -0.0599 0.063 0.75 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 556589 sc-eQTL 6.45e-01 -0.038 0.0824 0.75 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -926373 sc-eQTL 2.02e-02 -0.2 0.0854 0.75 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -582242 sc-eQTL 4.96e-01 0.076 0.112 0.748 CD16_Mono LOneK1K
ENSG00000079950 STX7 856730 sc-eQTL 5.54e-01 0.0436 0.0736 0.748 CD16_Mono LOneK1K
ENSG00000093134 VNN3 635163 sc-eQTL 1.95e-02 -0.252 0.107 0.748 CD16_Mono LOneK1K
ENSG00000112299 VNN1 655873 sc-eQTL 3.06e-01 -0.11 0.107 0.748 CD16_Mono LOneK1K
ENSG00000112303 VNN2 606469 sc-eQTL 9.04e-01 -0.0122 0.101 0.748 CD16_Mono LOneK1K
ENSG00000112306 RPS12 555359 sc-eQTL 6.05e-01 0.0222 0.0429 0.748 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -948184 sc-eQTL 8.22e-01 0.0146 0.065 0.748 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 556589 sc-eQTL 5.29e-01 -0.0657 0.104 0.748 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -926373 sc-eQTL 4.73e-01 0.0677 0.0942 0.748 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -582242 sc-eQTL 9.12e-01 0.01 0.0907 0.748 NK_CD56dim LOneK1K
ENSG00000079950 STX7 856730 sc-eQTL 3.31e-01 0.0828 0.085 0.748 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 606469 sc-eQTL 5.28e-01 0.0682 0.108 0.748 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 555359 sc-eQTL 3.74e-01 -0.0392 0.0439 0.748 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -948184 sc-eQTL 4.42e-01 -0.0699 0.0908 0.748 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079950 STX7 856730 eQTL 0.0262 0.0401 0.018 0.0 0.0 0.254

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina