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Genes within 1Mb (chr6:133366265:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -585905 sc-eQTL 6.59e-01 -0.0475 0.108 0.75 B L1
ENSG00000079931 MOXD1 964790 sc-eQTL 9.44e-01 -0.00794 0.114 0.75 B L1
ENSG00000079950 STX7 853067 sc-eQTL 8.65e-01 0.0073 0.0428 0.75 B L1
ENSG00000112303 VNN2 602806 sc-eQTL 7.27e-01 -0.0281 0.0805 0.75 B L1
ENSG00000112306 RPS12 551696 sc-eQTL 4.85e-01 0.0341 0.0486 0.75 B L1
ENSG00000118515 SGK1 -951847 sc-eQTL 5.18e-01 -0.0486 0.075 0.75 B L1
ENSG00000146409 SLC18B1 552926 sc-eQTL 9.97e-01 0.000364 0.103 0.75 B L1
ENSG00000028839 TBPL1 -585905 sc-eQTL 4.30e-01 0.0631 0.0797 0.75 CD4T L1
ENSG00000079950 STX7 853067 sc-eQTL 5.32e-01 0.0518 0.0829 0.75 CD4T L1
ENSG00000112303 VNN2 602806 sc-eQTL 8.14e-01 -0.017 0.0718 0.75 CD4T L1
ENSG00000112306 RPS12 551696 sc-eQTL 3.53e-01 0.0454 0.0488 0.75 CD4T L1
ENSG00000118515 SGK1 -951847 sc-eQTL 6.18e-01 -0.0328 0.0656 0.75 CD4T L1
ENSG00000146409 SLC18B1 552926 sc-eQTL 2.19e-01 -0.121 0.0985 0.75 CD4T L1
ENSG00000028839 TBPL1 -585905 sc-eQTL 5.61e-01 0.0458 0.0788 0.75 CD8T L1
ENSG00000079950 STX7 853067 sc-eQTL 2.20e-01 -0.101 0.082 0.75 CD8T L1
ENSG00000112303 VNN2 602806 sc-eQTL 7.20e-01 0.0344 0.0961 0.75 CD8T L1
ENSG00000112306 RPS12 551696 sc-eQTL 8.87e-01 -0.00468 0.0328 0.75 CD8T L1
ENSG00000118515 SGK1 -951847 sc-eQTL 7.48e-01 0.0163 0.0506 0.75 CD8T L1
ENSG00000146409 SLC18B1 552926 sc-eQTL 7.01e-01 -0.0382 0.0993 0.75 CD8T L1
ENSG00000028839 TBPL1 -585905 sc-eQTL 8.97e-01 -0.0158 0.122 0.745 DC L1
ENSG00000079950 STX7 853067 sc-eQTL 7.74e-01 0.0217 0.0755 0.745 DC L1
ENSG00000093134 VNN3 631500 sc-eQTL 5.94e-01 -0.05 0.0936 0.745 DC L1
ENSG00000112299 VNN1 652210 sc-eQTL 2.15e-01 -0.125 0.101 0.745 DC L1
ENSG00000112303 VNN2 602806 sc-eQTL 7.77e-01 -0.0306 0.108 0.745 DC L1
ENSG00000112306 RPS12 551696 sc-eQTL 7.78e-01 0.0171 0.0606 0.745 DC L1
ENSG00000118515 SGK1 -951847 sc-eQTL 2.86e-02 -0.153 0.0695 0.745 DC L1
ENSG00000146409 SLC18B1 552926 sc-eQTL 9.19e-01 -0.00974 0.096 0.745 DC L1
ENSG00000286438 AL591115.1 263137 sc-eQTL 2.97e-01 -0.091 0.0871 0.745 DC L1
ENSG00000286887 AL355881.1 -930036 sc-eQTL 9.76e-01 0.00325 0.109 0.745 DC L1
ENSG00000028839 TBPL1 -585905 sc-eQTL 8.96e-01 -0.011 0.0838 0.75 Mono L1
ENSG00000079950 STX7 853067 sc-eQTL 9.45e-02 0.0935 0.0557 0.75 Mono L1
ENSG00000093134 VNN3 631500 sc-eQTL 9.87e-01 -0.00155 0.0962 0.75 Mono L1
ENSG00000112299 VNN1 652210 sc-eQTL 6.87e-01 0.0418 0.103 0.75 Mono L1
ENSG00000112303 VNN2 602806 sc-eQTL 3.33e-02 -0.155 0.0723 0.75 Mono L1
ENSG00000112306 RPS12 551696 sc-eQTL 4.27e-01 0.0348 0.0437 0.75 Mono L1
ENSG00000118515 SGK1 -951847 sc-eQTL 6.52e-01 -0.0279 0.0618 0.75 Mono L1
ENSG00000146409 SLC18B1 552926 sc-eQTL 9.12e-01 -0.00955 0.0866 0.75 Mono L1
ENSG00000286887 AL355881.1 -930036 sc-eQTL 1.63e-01 -0.119 0.0847 0.75 Mono L1
ENSG00000028839 TBPL1 -585905 sc-eQTL 6.15e-01 0.0461 0.0917 0.749 NK L1
ENSG00000079950 STX7 853067 sc-eQTL 4.12e-01 0.0696 0.0848 0.749 NK L1
ENSG00000112303 VNN2 602806 sc-eQTL 6.96e-01 0.0413 0.106 0.749 NK L1
ENSG00000112306 RPS12 551696 sc-eQTL 4.42e-01 -0.0336 0.0437 0.749 NK L1
ENSG00000118515 SGK1 -951847 sc-eQTL 7.31e-01 -0.0278 0.0808 0.749 NK L1
ENSG00000028839 TBPL1 -585905 sc-eQTL 4.50e-01 -0.082 0.108 0.75 Other_T L1
ENSG00000079950 STX7 853067 sc-eQTL 7.34e-01 -0.0291 0.0853 0.75 Other_T L1
ENSG00000112303 VNN2 602806 sc-eQTL 7.47e-01 0.0333 0.103 0.75 Other_T L1
ENSG00000112306 RPS12 551696 sc-eQTL 5.98e-01 0.0216 0.0409 0.75 Other_T L1
ENSG00000118515 SGK1 -951847 sc-eQTL 8.01e-01 -0.019 0.0753 0.75 Other_T L1
ENSG00000146409 SLC18B1 552926 sc-eQTL 7.60e-01 0.0343 0.112 0.75 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -585905 sc-eQTL 9.50e-01 -0.00789 0.127 0.747 B_Activated L2
ENSG00000079931 MOXD1 964790 sc-eQTL 4.25e-01 0.0924 0.116 0.747 B_Activated L2
ENSG00000079950 STX7 853067 sc-eQTL 5.20e-01 -0.0699 0.108 0.747 B_Activated L2
ENSG00000112303 VNN2 602806 sc-eQTL 8.55e-01 0.0211 0.115 0.747 B_Activated L2
ENSG00000112306 RPS12 551696 sc-eQTL 9.57e-01 -0.00333 0.0619 0.747 B_Activated L2
ENSG00000118515 SGK1 -951847 sc-eQTL 7.13e-01 -0.0406 0.11 0.747 B_Activated L2
ENSG00000146409 SLC18B1 552926 sc-eQTL 5.90e-01 0.0585 0.108 0.747 B_Activated L2
ENSG00000028839 TBPL1 -585905 sc-eQTL 1.30e-01 0.181 0.119 0.749 B_Intermediate L2
ENSG00000079931 MOXD1 964790 sc-eQTL 5.66e-01 0.0605 0.105 0.749 B_Intermediate L2
ENSG00000079950 STX7 853067 sc-eQTL 8.41e-01 0.0138 0.0689 0.749 B_Intermediate L2
ENSG00000112303 VNN2 602806 sc-eQTL 7.45e-01 -0.0338 0.104 0.749 B_Intermediate L2
ENSG00000112306 RPS12 551696 sc-eQTL 4.63e-01 0.0467 0.0634 0.749 B_Intermediate L2
ENSG00000118515 SGK1 -951847 sc-eQTL 1.41e-01 0.162 0.109 0.749 B_Intermediate L2
ENSG00000146409 SLC18B1 552926 sc-eQTL 6.12e-01 -0.0581 0.114 0.749 B_Intermediate L2
ENSG00000028839 TBPL1 -585905 sc-eQTL 6.89e-01 -0.0462 0.115 0.75 B_Memory L2
ENSG00000079931 MOXD1 964790 sc-eQTL 3.61e-01 -0.097 0.106 0.75 B_Memory L2
ENSG00000079950 STX7 853067 sc-eQTL 3.36e-01 0.0802 0.0831 0.75 B_Memory L2
ENSG00000112303 VNN2 602806 sc-eQTL 7.14e-01 -0.04 0.109 0.75 B_Memory L2
ENSG00000112306 RPS12 551696 sc-eQTL 8.12e-01 -0.0125 0.0525 0.75 B_Memory L2
ENSG00000118515 SGK1 -951847 sc-eQTL 2.17e-01 0.119 0.096 0.75 B_Memory L2
ENSG00000146409 SLC18B1 552926 sc-eQTL 2.22e-02 0.249 0.108 0.75 B_Memory L2
ENSG00000028839 TBPL1 -585905 sc-eQTL 9.20e-01 -0.0107 0.107 0.75 B_Naive1 L2
ENSG00000079931 MOXD1 964790 sc-eQTL 8.80e-01 -0.0178 0.117 0.75 B_Naive1 L2
ENSG00000079950 STX7 853067 sc-eQTL 6.58e-01 0.0228 0.0513 0.75 B_Naive1 L2
ENSG00000112303 VNN2 602806 sc-eQTL 6.99e-01 0.0387 0.0997 0.75 B_Naive1 L2
ENSG00000112306 RPS12 551696 sc-eQTL 6.60e-01 0.025 0.0568 0.75 B_Naive1 L2
ENSG00000118515 SGK1 -951847 sc-eQTL 3.60e-01 -0.0814 0.0887 0.75 B_Naive1 L2
ENSG00000146409 SLC18B1 552926 sc-eQTL 9.71e-01 -0.00405 0.11 0.75 B_Naive1 L2
ENSG00000028839 TBPL1 -585905 sc-eQTL 2.61e-02 -0.253 0.113 0.751 B_Naive2 L2
ENSG00000079931 MOXD1 964790 sc-eQTL 1.17e-01 -0.174 0.111 0.751 B_Naive2 L2
ENSG00000079950 STX7 853067 sc-eQTL 9.33e-01 0.00507 0.0606 0.751 B_Naive2 L2
ENSG00000112303 VNN2 602806 sc-eQTL 7.93e-01 -0.0292 0.111 0.751 B_Naive2 L2
ENSG00000112306 RPS12 551696 sc-eQTL 4.75e-01 0.0421 0.0588 0.751 B_Naive2 L2
ENSG00000118515 SGK1 -951847 sc-eQTL 8.75e-01 -0.0164 0.104 0.751 B_Naive2 L2
ENSG00000146409 SLC18B1 552926 sc-eQTL 2.68e-01 -0.124 0.112 0.751 B_Naive2 L2
ENSG00000028839 TBPL1 -585905 sc-eQTL 5.48e-01 -0.0688 0.114 0.75 CD4_CTL L2
ENSG00000079950 STX7 853067 sc-eQTL 8.33e-01 0.024 0.114 0.75 CD4_CTL L2
ENSG00000112303 VNN2 602806 sc-eQTL 5.62e-01 0.0666 0.115 0.75 CD4_CTL L2
ENSG00000112306 RPS12 551696 sc-eQTL 8.06e-01 0.013 0.053 0.75 CD4_CTL L2
ENSG00000118515 SGK1 -951847 sc-eQTL 7.18e-02 0.165 0.0911 0.75 CD4_CTL L2
ENSG00000146409 SLC18B1 552926 sc-eQTL 2.78e-01 -0.116 0.106 0.75 CD4_CTL L2
ENSG00000028839 TBPL1 -585905 sc-eQTL 1.96e-01 -0.118 0.0912 0.75 CD4_Naive L2
ENSG00000079950 STX7 853067 sc-eQTL 9.27e-01 0.00825 0.0898 0.75 CD4_Naive L2
ENSG00000112303 VNN2 602806 sc-eQTL 6.36e-01 -0.0394 0.0832 0.75 CD4_Naive L2
ENSG00000112306 RPS12 551696 sc-eQTL 4.69e-01 0.0391 0.0539 0.75 CD4_Naive L2
ENSG00000118515 SGK1 -951847 sc-eQTL 6.88e-01 -0.0266 0.0661 0.75 CD4_Naive L2
ENSG00000146409 SLC18B1 552926 sc-eQTL 1.04e-01 -0.169 0.103 0.75 CD4_Naive L2
ENSG00000028839 TBPL1 -585905 sc-eQTL 8.53e-02 0.169 0.0975 0.75 CD4_TCM L2
ENSG00000079950 STX7 853067 sc-eQTL 1.90e-01 0.129 0.0985 0.75 CD4_TCM L2
ENSG00000112303 VNN2 602806 sc-eQTL 8.58e-01 -0.0175 0.0975 0.75 CD4_TCM L2
ENSG00000112306 RPS12 551696 sc-eQTL 9.46e-01 0.0034 0.0505 0.75 CD4_TCM L2
ENSG00000118515 SGK1 -951847 sc-eQTL 3.48e-01 -0.0664 0.0706 0.75 CD4_TCM L2
ENSG00000146409 SLC18B1 552926 sc-eQTL 7.47e-01 0.0378 0.117 0.75 CD4_TCM L2
ENSG00000028839 TBPL1 -585905 sc-eQTL 1.08e-01 0.19 0.117 0.75 CD4_TEM L2
ENSG00000079950 STX7 853067 sc-eQTL 7.94e-02 -0.207 0.117 0.75 CD4_TEM L2
ENSG00000112303 VNN2 602806 sc-eQTL 3.24e-01 0.112 0.113 0.75 CD4_TEM L2
ENSG00000112306 RPS12 551696 sc-eQTL 4.38e-01 0.0361 0.0464 0.75 CD4_TEM L2
ENSG00000118515 SGK1 -951847 sc-eQTL 9.48e-01 0.00519 0.0799 0.75 CD4_TEM L2
ENSG00000146409 SLC18B1 552926 sc-eQTL 2.85e-01 0.123 0.115 0.75 CD4_TEM L2
ENSG00000028839 TBPL1 -585905 sc-eQTL 8.59e-01 -0.0181 0.101 0.75 CD8_CTL L2
ENSG00000079950 STX7 853067 sc-eQTL 2.78e-01 -0.103 0.0945 0.75 CD8_CTL L2
ENSG00000112303 VNN2 602806 sc-eQTL 4.92e-01 0.0739 0.108 0.75 CD8_CTL L2
ENSG00000112306 RPS12 551696 sc-eQTL 5.34e-01 -0.0358 0.0575 0.75 CD8_CTL L2
ENSG00000118515 SGK1 -951847 sc-eQTL 7.56e-01 -0.0302 0.0973 0.75 CD8_CTL L2
ENSG00000146409 SLC18B1 552926 sc-eQTL 2.90e-01 -0.118 0.111 0.75 CD8_CTL L2
ENSG00000028839 TBPL1 -585905 sc-eQTL 5.13e-01 0.0702 0.107 0.75 CD8_Naive L2
ENSG00000079950 STX7 853067 sc-eQTL 5.56e-01 -0.0673 0.114 0.75 CD8_Naive L2
ENSG00000112303 VNN2 602806 sc-eQTL 6.03e-01 -0.0513 0.0985 0.75 CD8_Naive L2
ENSG00000112306 RPS12 551696 sc-eQTL 4.22e-01 0.0453 0.0563 0.75 CD8_Naive L2
ENSG00000118515 SGK1 -951847 sc-eQTL 7.93e-01 -0.0186 0.0708 0.75 CD8_Naive L2
ENSG00000146409 SLC18B1 552926 sc-eQTL 5.92e-01 -0.0607 0.113 0.75 CD8_Naive L2
ENSG00000028839 TBPL1 -585905 sc-eQTL 2.58e-01 -0.138 0.122 0.745 CD8_TCM L2
ENSG00000079950 STX7 853067 sc-eQTL 1.03e-01 0.184 0.112 0.745 CD8_TCM L2
ENSG00000112303 VNN2 602806 sc-eQTL 3.05e-01 -0.115 0.112 0.745 CD8_TCM L2
ENSG00000112306 RPS12 551696 sc-eQTL 9.89e-02 0.0902 0.0544 0.745 CD8_TCM L2
ENSG00000118515 SGK1 -951847 sc-eQTL 4.59e-01 -0.0672 0.0906 0.745 CD8_TCM L2
ENSG00000146409 SLC18B1 552926 sc-eQTL 9.49e-02 -0.2 0.119 0.745 CD8_TCM L2
ENSG00000028839 TBPL1 -585905 sc-eQTL 5.87e-02 0.209 0.11 0.753 CD8_TEM L2
ENSG00000079950 STX7 853067 sc-eQTL 3.34e-01 0.117 0.121 0.753 CD8_TEM L2
ENSG00000112303 VNN2 602806 sc-eQTL 5.57e-01 0.0708 0.12 0.753 CD8_TEM L2
ENSG00000112306 RPS12 551696 sc-eQTL 9.35e-01 -0.00528 0.0649 0.753 CD8_TEM L2
ENSG00000118515 SGK1 -951847 sc-eQTL 4.88e-01 -0.0737 0.106 0.753 CD8_TEM L2
ENSG00000146409 SLC18B1 552926 sc-eQTL 1.28e-01 0.186 0.122 0.753 CD8_TEM L2
ENSG00000028839 TBPL1 -585905 sc-eQTL 1.57e-01 -0.164 0.116 0.753 MAIT L2
ENSG00000079950 STX7 853067 sc-eQTL 7.88e-01 0.0298 0.111 0.753 MAIT L2
ENSG00000112303 VNN2 602806 sc-eQTL 2.86e-01 -0.12 0.112 0.753 MAIT L2
ENSG00000112306 RPS12 551696 sc-eQTL 5.75e-01 0.031 0.0553 0.753 MAIT L2
ENSG00000118515 SGK1 -951847 sc-eQTL 6.68e-01 0.0335 0.0778 0.753 MAIT L2
ENSG00000146409 SLC18B1 552926 sc-eQTL 7.21e-01 -0.0414 0.116 0.753 MAIT L2
ENSG00000028839 TBPL1 -585905 sc-eQTL 5.28e-01 0.0763 0.121 0.751 NK_CD56bright L2
ENSG00000079950 STX7 853067 sc-eQTL 4.29e-01 -0.0888 0.112 0.751 NK_CD56bright L2
ENSG00000112303 VNN2 602806 sc-eQTL 2.79e-01 -0.123 0.114 0.751 NK_CD56bright L2
ENSG00000112306 RPS12 551696 sc-eQTL 5.83e-01 -0.0348 0.0634 0.751 NK_CD56bright L2
ENSG00000118515 SGK1 -951847 sc-eQTL 6.60e-01 0.0418 0.0948 0.751 NK_CD56bright L2
ENSG00000028839 TBPL1 -585905 sc-eQTL 6.81e-01 -0.0406 0.0987 0.748 NK_CD56dim L2
ENSG00000079950 STX7 853067 sc-eQTL 5.73e-01 0.051 0.0903 0.748 NK_CD56dim L2
ENSG00000112303 VNN2 602806 sc-eQTL 3.31e-01 0.11 0.113 0.748 NK_CD56dim L2
ENSG00000112306 RPS12 551696 sc-eQTL 2.15e-01 -0.0556 0.0447 0.748 NK_CD56dim L2
ENSG00000118515 SGK1 -951847 sc-eQTL 8.50e-01 -0.0189 0.0994 0.748 NK_CD56dim L2
ENSG00000028839 TBPL1 -585905 sc-eQTL 9.71e-01 0.00445 0.122 0.751 NK_HLA L2
ENSG00000079950 STX7 853067 sc-eQTL 5.39e-01 0.0681 0.111 0.751 NK_HLA L2
ENSG00000112303 VNN2 602806 sc-eQTL 8.97e-01 -0.0146 0.112 0.751 NK_HLA L2
ENSG00000112306 RPS12 551696 sc-eQTL 3.70e-01 -0.0469 0.0522 0.751 NK_HLA L2
ENSG00000118515 SGK1 -951847 sc-eQTL 8.75e-01 0.0163 0.103 0.751 NK_HLA L2
ENSG00000028839 TBPL1 -585905 sc-eQTL 6.57e-01 0.0454 0.102 0.748 NK_cytokine L2
ENSG00000079950 STX7 853067 sc-eQTL 9.78e-01 0.00274 0.099 0.748 NK_cytokine L2
ENSG00000112303 VNN2 602806 sc-eQTL 4.37e-01 0.0865 0.111 0.748 NK_cytokine L2
ENSG00000112306 RPS12 551696 sc-eQTL 9.44e-01 0.00426 0.0604 0.748 NK_cytokine L2
ENSG00000118515 SGK1 -951847 sc-eQTL 8.16e-02 -0.175 0.0998 0.748 NK_cytokine L2
ENSG00000028839 TBPL1 -585905 sc-eQTL 7.26e-01 -0.0503 0.143 0.756 PB L2
ENSG00000079931 MOXD1 964790 sc-eQTL 6.63e-01 -0.0533 0.122 0.756 PB L2
ENSG00000079950 STX7 853067 sc-eQTL 7.60e-01 0.0312 0.102 0.756 PB L2
ENSG00000112303 VNN2 602806 sc-eQTL 5.40e-01 0.0764 0.124 0.756 PB L2
ENSG00000112306 RPS12 551696 sc-eQTL 9.50e-01 0.00445 0.0707 0.756 PB L2
ENSG00000118515 SGK1 -951847 sc-eQTL 7.70e-01 0.0334 0.114 0.756 PB L2
ENSG00000146409 SLC18B1 552926 sc-eQTL 5.90e-01 0.0715 0.132 0.756 PB L2
ENSG00000028839 TBPL1 -585905 sc-eQTL 1.85e-01 0.151 0.114 0.754 Pro_T L2
ENSG00000079950 STX7 853067 sc-eQTL 7.42e-01 -0.0336 0.102 0.754 Pro_T L2
ENSG00000112303 VNN2 602806 sc-eQTL 7.21e-01 0.0392 0.11 0.754 Pro_T L2
ENSG00000112306 RPS12 551696 sc-eQTL 6.38e-01 -0.0195 0.0414 0.754 Pro_T L2
ENSG00000118515 SGK1 -951847 sc-eQTL 9.84e-01 -0.0017 0.0831 0.754 Pro_T L2
ENSG00000146409 SLC18B1 552926 sc-eQTL 3.87e-01 0.0929 0.107 0.754 Pro_T L2
ENSG00000028839 TBPL1 -585905 sc-eQTL 3.63e-01 0.107 0.117 0.75 Treg L2
ENSG00000079950 STX7 853067 sc-eQTL 8.50e-01 -0.0209 0.111 0.75 Treg L2
ENSG00000112303 VNN2 602806 sc-eQTL 5.85e-01 -0.0509 0.093 0.75 Treg L2
ENSG00000112306 RPS12 551696 sc-eQTL 4.67e-01 0.03 0.0411 0.75 Treg L2
ENSG00000118515 SGK1 -951847 sc-eQTL 4.76e-01 0.0619 0.0867 0.75 Treg L2
ENSG00000146409 SLC18B1 552926 sc-eQTL 2.27e-01 0.14 0.116 0.75 Treg L2
ENSG00000028839 TBPL1 -585905 sc-eQTL 2.50e-01 -0.144 0.125 0.741 cDC L2
ENSG00000079950 STX7 853067 sc-eQTL 9.81e-01 -0.00234 0.0982 0.741 cDC L2
ENSG00000093134 VNN3 631500 sc-eQTL 2.95e-01 -0.102 0.0972 0.741 cDC L2
ENSG00000112299 VNN1 652210 sc-eQTL 5.56e-01 -0.0675 0.115 0.741 cDC L2
ENSG00000112303 VNN2 602806 sc-eQTL 6.80e-01 0.0461 0.112 0.741 cDC L2
ENSG00000112306 RPS12 551696 sc-eQTL 5.90e-01 -0.0298 0.0551 0.741 cDC L2
ENSG00000118515 SGK1 -951847 sc-eQTL 7.78e-02 -0.163 0.0921 0.741 cDC L2
ENSG00000146409 SLC18B1 552926 sc-eQTL 5.47e-01 -0.0658 0.109 0.741 cDC L2
ENSG00000286438 AL591115.1 263137 sc-eQTL 4.08e-01 -0.0723 0.0871 0.741 cDC L2
ENSG00000286887 AL355881.1 -930036 sc-eQTL 6.07e-01 -0.0552 0.107 0.741 cDC L2
ENSG00000028839 TBPL1 -585905 sc-eQTL 4.20e-01 -0.0768 0.0952 0.75 cMono_IL1B L2
ENSG00000079950 STX7 853067 sc-eQTL 1.18e-01 0.113 0.0719 0.75 cMono_IL1B L2
ENSG00000093134 VNN3 631500 sc-eQTL 9.91e-01 0.00112 0.102 0.75 cMono_IL1B L2
ENSG00000112299 VNN1 652210 sc-eQTL 9.31e-01 -0.00894 0.103 0.75 cMono_IL1B L2
ENSG00000112303 VNN2 602806 sc-eQTL 3.12e-01 -0.0835 0.0823 0.75 cMono_IL1B L2
ENSG00000112306 RPS12 551696 sc-eQTL 8.07e-01 0.0112 0.0458 0.75 cMono_IL1B L2
ENSG00000118515 SGK1 -951847 sc-eQTL 2.76e-01 -0.0744 0.0681 0.75 cMono_IL1B L2
ENSG00000146409 SLC18B1 552926 sc-eQTL 4.93e-01 -0.0606 0.0883 0.75 cMono_IL1B L2
ENSG00000286887 AL355881.1 -930036 sc-eQTL 6.93e-02 -0.167 0.0913 0.75 cMono_IL1B L2
ENSG00000028839 TBPL1 -585905 sc-eQTL 9.88e-01 -0.00168 0.108 0.75 cMono_S100A L2
ENSG00000079950 STX7 853067 sc-eQTL 2.13e-01 0.0973 0.0778 0.75 cMono_S100A L2
ENSG00000093134 VNN3 631500 sc-eQTL 5.85e-01 0.0534 0.0974 0.75 cMono_S100A L2
ENSG00000112299 VNN1 652210 sc-eQTL 3.45e-01 0.1 0.106 0.75 cMono_S100A L2
ENSG00000112303 VNN2 602806 sc-eQTL 3.53e-02 -0.145 0.0686 0.75 cMono_S100A L2
ENSG00000112306 RPS12 551696 sc-eQTL 7.16e-01 0.0182 0.0499 0.75 cMono_S100A L2
ENSG00000118515 SGK1 -951847 sc-eQTL 6.32e-01 -0.0273 0.0571 0.75 cMono_S100A L2
ENSG00000146409 SLC18B1 552926 sc-eQTL 8.47e-01 -0.0178 0.0924 0.75 cMono_S100A L2
ENSG00000286887 AL355881.1 -930036 sc-eQTL 1.06e-01 -0.146 0.0898 0.75 cMono_S100A L2
ENSG00000028839 TBPL1 -585905 sc-eQTL 4.19e-01 -0.121 0.15 0.755 gdT L2
ENSG00000079950 STX7 853067 sc-eQTL 7.90e-01 0.0343 0.129 0.755 gdT L2
ENSG00000112303 VNN2 602806 sc-eQTL 6.60e-01 0.0629 0.143 0.755 gdT L2
ENSG00000112306 RPS12 551696 sc-eQTL 5.10e-01 -0.0358 0.0542 0.755 gdT L2
ENSG00000118515 SGK1 -951847 sc-eQTL 6.71e-01 0.0436 0.102 0.755 gdT L2
ENSG00000146409 SLC18B1 552926 sc-eQTL 5.60e-01 0.0818 0.14 0.755 gdT L2
ENSG00000028839 TBPL1 -585905 sc-eQTL 2.78e-01 -0.119 0.11 0.742 intMono L2
ENSG00000079950 STX7 853067 sc-eQTL 3.30e-02 0.223 0.104 0.742 intMono L2
ENSG00000093134 VNN3 631500 sc-eQTL 4.98e-01 -0.0719 0.106 0.742 intMono L2
ENSG00000112299 VNN1 652210 sc-eQTL 3.04e-02 0.226 0.104 0.742 intMono L2
ENSG00000112303 VNN2 602806 sc-eQTL 5.68e-01 -0.0608 0.106 0.742 intMono L2
ENSG00000112306 RPS12 551696 sc-eQTL 4.51e-01 -0.035 0.0462 0.742 intMono L2
ENSG00000118515 SGK1 -951847 sc-eQTL 7.83e-01 0.0214 0.0778 0.742 intMono L2
ENSG00000146409 SLC18B1 552926 sc-eQTL 2.83e-01 -0.121 0.112 0.742 intMono L2
ENSG00000286887 AL355881.1 -930036 sc-eQTL 4.88e-01 0.0747 0.108 0.742 intMono L2
ENSG00000028839 TBPL1 -585905 sc-eQTL 5.22e-02 0.223 0.114 0.744 ncMono L2
ENSG00000079950 STX7 853067 sc-eQTL 2.64e-01 -0.0871 0.0777 0.744 ncMono L2
ENSG00000093134 VNN3 631500 sc-eQTL 7.57e-03 -0.292 0.108 0.744 ncMono L2
ENSG00000112299 VNN1 652210 sc-eQTL 1.79e-01 -0.147 0.109 0.744 ncMono L2
ENSG00000112303 VNN2 602806 sc-eQTL 8.63e-01 0.0181 0.105 0.744 ncMono L2
ENSG00000112306 RPS12 551696 sc-eQTL 9.80e-01 0.00133 0.0527 0.744 ncMono L2
ENSG00000118515 SGK1 -951847 sc-eQTL 8.95e-01 -0.00986 0.0745 0.744 ncMono L2
ENSG00000146409 SLC18B1 552926 sc-eQTL 8.70e-01 -0.0152 0.093 0.744 ncMono L2
ENSG00000286887 AL355881.1 -930036 sc-eQTL 5.45e-01 -0.0595 0.0982 0.744 ncMono L2
ENSG00000028839 TBPL1 -585905 sc-eQTL 9.72e-01 -0.00472 0.136 0.737 pDC L2
ENSG00000079950 STX7 853067 sc-eQTL 8.78e-01 0.0139 0.0903 0.737 pDC L2
ENSG00000093134 VNN3 631500 sc-eQTL 9.62e-01 -0.00433 0.0909 0.737 pDC L2
ENSG00000112299 VNN1 652210 sc-eQTL 3.09e-01 -0.0941 0.0922 0.737 pDC L2
ENSG00000112303 VNN2 602806 sc-eQTL 8.40e-01 0.0223 0.11 0.737 pDC L2
ENSG00000112306 RPS12 551696 sc-eQTL 4.54e-01 -0.0569 0.0758 0.737 pDC L2
ENSG00000118515 SGK1 -951847 sc-eQTL 8.22e-02 -0.134 0.0764 0.737 pDC L2
ENSG00000146409 SLC18B1 552926 sc-eQTL 9.08e-01 0.0129 0.112 0.737 pDC L2
ENSG00000286438 AL591115.1 263137 sc-eQTL 3.77e-01 -0.095 0.107 0.737 pDC L2
ENSG00000286887 AL355881.1 -930036 sc-eQTL 9.79e-01 0.00253 0.0953 0.737 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -585905 sc-eQTL 2.85e-01 0.123 0.115 0.75 B_Memory LOneK1K
ENSG00000079931 MOXD1 964790 sc-eQTL 7.03e-01 -0.0426 0.112 0.75 B_Memory LOneK1K
ENSG00000079950 STX7 853067 sc-eQTL 2.74e-01 0.0692 0.0631 0.75 B_Memory LOneK1K
ENSG00000112303 VNN2 602806 sc-eQTL 8.16e-01 0.0233 0.1 0.75 B_Memory LOneK1K
ENSG00000112306 RPS12 551696 sc-eQTL 8.29e-01 0.0123 0.057 0.75 B_Memory LOneK1K
ENSG00000118515 SGK1 -951847 sc-eQTL 2.80e-01 0.0964 0.0889 0.75 B_Memory LOneK1K
ENSG00000146409 SLC18B1 552926 sc-eQTL 8.87e-01 0.0149 0.105 0.75 B_Memory LOneK1K
ENSG00000028839 TBPL1 -585905 sc-eQTL 1.57e-01 -0.151 0.106 0.75 B_Naive LOneK1K
ENSG00000079931 MOXD1 964790 sc-eQTL 6.73e-01 -0.0495 0.117 0.75 B_Naive LOneK1K
ENSG00000079950 STX7 853067 sc-eQTL 6.51e-01 0.0218 0.0481 0.75 B_Naive LOneK1K
ENSG00000112303 VNN2 602806 sc-eQTL 9.08e-01 -0.0109 0.0935 0.75 B_Naive LOneK1K
ENSG00000112306 RPS12 551696 sc-eQTL 6.15e-01 0.0284 0.0565 0.75 B_Naive LOneK1K
ENSG00000118515 SGK1 -951847 sc-eQTL 3.15e-01 -0.088 0.0874 0.75 B_Naive LOneK1K
ENSG00000146409 SLC18B1 552926 sc-eQTL 6.05e-01 -0.0553 0.107 0.75 B_Naive LOneK1K
ENSG00000028839 TBPL1 -585905 sc-eQTL 4.77e-01 -0.0615 0.0864 0.75 CD14_Mono LOneK1K
ENSG00000079950 STX7 853067 sc-eQTL 5.74e-02 0.114 0.0596 0.75 CD14_Mono LOneK1K
ENSG00000093134 VNN3 631500 sc-eQTL 8.41e-01 0.0197 0.098 0.75 CD14_Mono LOneK1K
ENSG00000112299 VNN1 652210 sc-eQTL 5.85e-01 0.0558 0.102 0.75 CD14_Mono LOneK1K
ENSG00000112303 VNN2 602806 sc-eQTL 1.18e-01 -0.106 0.0672 0.75 CD14_Mono LOneK1K
ENSG00000112306 RPS12 551696 sc-eQTL 8.68e-01 0.00774 0.0463 0.75 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -951847 sc-eQTL 3.43e-01 -0.0599 0.063 0.75 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 552926 sc-eQTL 6.45e-01 -0.038 0.0824 0.75 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -930036 sc-eQTL 2.02e-02 -0.2 0.0854 0.75 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -585905 sc-eQTL 4.96e-01 0.076 0.112 0.748 CD16_Mono LOneK1K
ENSG00000079950 STX7 853067 sc-eQTL 5.54e-01 0.0436 0.0736 0.748 CD16_Mono LOneK1K
ENSG00000093134 VNN3 631500 sc-eQTL 1.95e-02 -0.252 0.107 0.748 CD16_Mono LOneK1K
ENSG00000112299 VNN1 652210 sc-eQTL 3.06e-01 -0.11 0.107 0.748 CD16_Mono LOneK1K
ENSG00000112303 VNN2 602806 sc-eQTL 9.04e-01 -0.0122 0.101 0.748 CD16_Mono LOneK1K
ENSG00000112306 RPS12 551696 sc-eQTL 6.05e-01 0.0222 0.0429 0.748 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -951847 sc-eQTL 8.22e-01 0.0146 0.065 0.748 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 552926 sc-eQTL 5.29e-01 -0.0657 0.104 0.748 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -930036 sc-eQTL 4.73e-01 0.0677 0.0942 0.748 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -585905 sc-eQTL 9.12e-01 0.01 0.0907 0.748 NK_CD56dim LOneK1K
ENSG00000079950 STX7 853067 sc-eQTL 3.31e-01 0.0828 0.085 0.748 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 602806 sc-eQTL 5.28e-01 0.0682 0.108 0.748 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 551696 sc-eQTL 3.74e-01 -0.0392 0.0439 0.748 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -951847 sc-eQTL 4.42e-01 -0.0699 0.0908 0.748 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079950 STX7 853067 eQTL 0.0356 0.0381 0.0181 0.0 0.0 0.253

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina