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Genes within 1Mb (chr6:133365341:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -586829 sc-eQTL 6.07e-01 -0.0438 0.0852 0.449 B L1
ENSG00000079931 MOXD1 963866 sc-eQTL 4.44e-02 -0.18 0.0891 0.449 B L1
ENSG00000079950 STX7 852143 sc-eQTL 5.20e-01 -0.0219 0.0339 0.449 B L1
ENSG00000112303 VNN2 601882 sc-eQTL 6.51e-01 -0.0289 0.0638 0.449 B L1
ENSG00000112306 RPS12 550772 sc-eQTL 4.38e-01 -0.03 0.0385 0.449 B L1
ENSG00000118515 SGK1 -952771 sc-eQTL 5.50e-01 0.0356 0.0594 0.449 B L1
ENSG00000146409 SLC18B1 552002 sc-eQTL 3.84e-01 -0.0708 0.081 0.449 B L1
ENSG00000028839 TBPL1 -586829 sc-eQTL 8.53e-01 -0.0116 0.0628 0.449 CD4T L1
ENSG00000079950 STX7 852143 sc-eQTL 7.03e-01 -0.025 0.0653 0.449 CD4T L1
ENSG00000112303 VNN2 601882 sc-eQTL 3.04e-01 -0.0581 0.0564 0.449 CD4T L1
ENSG00000112306 RPS12 550772 sc-eQTL 9.17e-01 0.00402 0.0384 0.449 CD4T L1
ENSG00000118515 SGK1 -952771 sc-eQTL 9.41e-01 0.00382 0.0517 0.449 CD4T L1
ENSG00000146409 SLC18B1 552002 sc-eQTL 2.40e-01 -0.0913 0.0775 0.449 CD4T L1
ENSG00000028839 TBPL1 -586829 sc-eQTL 4.41e-01 -0.0483 0.0626 0.449 CD8T L1
ENSG00000079950 STX7 852143 sc-eQTL 1.98e-02 -0.152 0.0646 0.449 CD8T L1
ENSG00000112303 VNN2 601882 sc-eQTL 8.87e-01 0.0109 0.0764 0.449 CD8T L1
ENSG00000112306 RPS12 550772 sc-eQTL 4.78e-01 -0.0185 0.0261 0.449 CD8T L1
ENSG00000118515 SGK1 -952771 sc-eQTL 3.01e-01 0.0416 0.0401 0.449 CD8T L1
ENSG00000146409 SLC18B1 552002 sc-eQTL 8.66e-01 -0.0134 0.0789 0.449 CD8T L1
ENSG00000028839 TBPL1 -586829 sc-eQTL 2.09e-01 -0.119 0.0944 0.448 DC L1
ENSG00000079950 STX7 852143 sc-eQTL 6.22e-01 -0.0291 0.0588 0.448 DC L1
ENSG00000093134 VNN3 630576 sc-eQTL 2.96e-01 -0.0763 0.0728 0.448 DC L1
ENSG00000112299 VNN1 651286 sc-eQTL 3.51e-01 -0.0735 0.0786 0.448 DC L1
ENSG00000112303 VNN2 601882 sc-eQTL 5.27e-02 -0.163 0.0835 0.448 DC L1
ENSG00000112306 RPS12 550772 sc-eQTL 9.21e-01 -0.00471 0.0473 0.448 DC L1
ENSG00000118515 SGK1 -952771 sc-eQTL 3.34e-01 -0.0531 0.0547 0.448 DC L1
ENSG00000146409 SLC18B1 552002 sc-eQTL 4.42e-01 0.0576 0.0747 0.448 DC L1
ENSG00000286438 AL591115.1 262213 sc-eQTL 3.69e-01 -0.0612 0.068 0.448 DC L1
ENSG00000286887 AL355881.1 -930960 sc-eQTL 6.01e-01 0.0444 0.0848 0.448 DC L1
ENSG00000028839 TBPL1 -586829 sc-eQTL 5.78e-01 -0.0366 0.0658 0.449 Mono L1
ENSG00000079950 STX7 852143 sc-eQTL 1.43e-01 0.0645 0.0438 0.449 Mono L1
ENSG00000093134 VNN3 630576 sc-eQTL 1.10e-01 -0.121 0.0752 0.449 Mono L1
ENSG00000112299 VNN1 651286 sc-eQTL 3.97e-01 0.0689 0.0812 0.449 Mono L1
ENSG00000112303 VNN2 601882 sc-eQTL 1.69e-01 -0.0788 0.0572 0.449 Mono L1
ENSG00000112306 RPS12 550772 sc-eQTL 1.35e-01 0.0513 0.0342 0.449 Mono L1
ENSG00000118515 SGK1 -952771 sc-eQTL 7.62e-01 0.0147 0.0486 0.449 Mono L1
ENSG00000146409 SLC18B1 552002 sc-eQTL 9.75e-01 0.0021 0.0681 0.449 Mono L1
ENSG00000286887 AL355881.1 -930960 sc-eQTL 5.08e-01 0.0443 0.0668 0.449 Mono L1
ENSG00000028839 TBPL1 -586829 sc-eQTL 6.52e-01 0.0332 0.0736 0.446 NK L1
ENSG00000079950 STX7 852143 sc-eQTL 4.91e-01 -0.0469 0.068 0.446 NK L1
ENSG00000112303 VNN2 601882 sc-eQTL 7.86e-01 -0.023 0.0847 0.446 NK L1
ENSG00000112306 RPS12 550772 sc-eQTL 9.60e-01 0.00176 0.0351 0.446 NK L1
ENSG00000118515 SGK1 -952771 sc-eQTL 8.53e-01 0.012 0.0648 0.446 NK L1
ENSG00000028839 TBPL1 -586829 sc-eQTL 3.76e-01 0.0748 0.0843 0.449 Other_T L1
ENSG00000079950 STX7 852143 sc-eQTL 7.19e-01 -0.0239 0.0664 0.449 Other_T L1
ENSG00000112303 VNN2 601882 sc-eQTL 6.11e-01 0.0409 0.0803 0.449 Other_T L1
ENSG00000112306 RPS12 550772 sc-eQTL 5.12e-01 0.0209 0.0318 0.449 Other_T L1
ENSG00000118515 SGK1 -952771 sc-eQTL 2.25e-01 0.0711 0.0584 0.449 Other_T L1
ENSG00000146409 SLC18B1 552002 sc-eQTL 3.67e-01 -0.0787 0.087 0.449 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -586829 sc-eQTL 5.30e-01 -0.0625 0.0993 0.452 B_Activated L2
ENSG00000079931 MOXD1 963866 sc-eQTL 9.53e-01 -0.00541 0.0908 0.452 B_Activated L2
ENSG00000079950 STX7 852143 sc-eQTL 6.47e-01 -0.0391 0.0851 0.452 B_Activated L2
ENSG00000112303 VNN2 601882 sc-eQTL 5.82e-01 -0.05 0.0906 0.452 B_Activated L2
ENSG00000112306 RPS12 550772 sc-eQTL 8.04e-01 -0.0121 0.0486 0.452 B_Activated L2
ENSG00000118515 SGK1 -952771 sc-eQTL 6.31e-01 0.0416 0.0865 0.452 B_Activated L2
ENSG00000146409 SLC18B1 552002 sc-eQTL 7.72e-01 -0.0247 0.085 0.452 B_Activated L2
ENSG00000028839 TBPL1 -586829 sc-eQTL 6.70e-01 -0.0403 0.0944 0.451 B_Intermediate L2
ENSG00000079931 MOXD1 963866 sc-eQTL 4.40e-03 -0.234 0.0813 0.451 B_Intermediate L2
ENSG00000079950 STX7 852143 sc-eQTL 2.04e-01 -0.0688 0.0541 0.451 B_Intermediate L2
ENSG00000112303 VNN2 601882 sc-eQTL 2.94e-01 -0.0857 0.0815 0.451 B_Intermediate L2
ENSG00000112306 RPS12 550772 sc-eQTL 4.94e-01 -0.0343 0.05 0.451 B_Intermediate L2
ENSG00000118515 SGK1 -952771 sc-eQTL 2.53e-01 0.099 0.0863 0.451 B_Intermediate L2
ENSG00000146409 SLC18B1 552002 sc-eQTL 9.99e-01 -0.000105 0.0902 0.451 B_Intermediate L2
ENSG00000028839 TBPL1 -586829 sc-eQTL 8.91e-02 0.152 0.0891 0.448 B_Memory L2
ENSG00000079931 MOXD1 963866 sc-eQTL 6.76e-01 -0.0346 0.0827 0.448 B_Memory L2
ENSG00000079950 STX7 852143 sc-eQTL 7.10e-02 -0.117 0.0644 0.448 B_Memory L2
ENSG00000112303 VNN2 601882 sc-eQTL 9.10e-02 -0.143 0.0843 0.448 B_Memory L2
ENSG00000112306 RPS12 550772 sc-eQTL 2.57e-01 -0.0463 0.0408 0.448 B_Memory L2
ENSG00000118515 SGK1 -952771 sc-eQTL 9.11e-01 0.00835 0.075 0.448 B_Memory L2
ENSG00000146409 SLC18B1 552002 sc-eQTL 1.92e-01 0.111 0.085 0.448 B_Memory L2
ENSG00000028839 TBPL1 -586829 sc-eQTL 7.76e-01 -0.0241 0.0847 0.449 B_Naive1 L2
ENSG00000079931 MOXD1 963866 sc-eQTL 2.96e-02 -0.202 0.0922 0.449 B_Naive1 L2
ENSG00000079950 STX7 852143 sc-eQTL 7.17e-01 0.0148 0.0407 0.449 B_Naive1 L2
ENSG00000112303 VNN2 601882 sc-eQTL 4.77e-01 0.0563 0.079 0.449 B_Naive1 L2
ENSG00000112306 RPS12 550772 sc-eQTL 6.88e-01 -0.0181 0.045 0.449 B_Naive1 L2
ENSG00000118515 SGK1 -952771 sc-eQTL 3.36e-01 -0.0678 0.0703 0.449 B_Naive1 L2
ENSG00000146409 SLC18B1 552002 sc-eQTL 6.56e-01 -0.0388 0.0869 0.449 B_Naive1 L2
ENSG00000028839 TBPL1 -586829 sc-eQTL 7.47e-02 -0.16 0.0891 0.448 B_Naive2 L2
ENSG00000079931 MOXD1 963866 sc-eQTL 3.62e-01 -0.0799 0.0874 0.448 B_Naive2 L2
ENSG00000079950 STX7 852143 sc-eQTL 8.59e-01 -0.00848 0.0477 0.448 B_Naive2 L2
ENSG00000112303 VNN2 601882 sc-eQTL 6.83e-01 -0.0358 0.0876 0.448 B_Naive2 L2
ENSG00000112306 RPS12 550772 sc-eQTL 9.82e-02 -0.0765 0.0461 0.448 B_Naive2 L2
ENSG00000118515 SGK1 -952771 sc-eQTL 6.85e-01 0.0333 0.0819 0.448 B_Naive2 L2
ENSG00000146409 SLC18B1 552002 sc-eQTL 3.59e-02 -0.185 0.0876 0.448 B_Naive2 L2
ENSG00000028839 TBPL1 -586829 sc-eQTL 6.50e-01 -0.0414 0.0912 0.45 CD4_CTL L2
ENSG00000079950 STX7 852143 sc-eQTL 8.43e-01 0.018 0.0906 0.45 CD4_CTL L2
ENSG00000112303 VNN2 601882 sc-eQTL 5.90e-02 -0.172 0.0906 0.45 CD4_CTL L2
ENSG00000112306 RPS12 550772 sc-eQTL 2.28e-01 -0.0509 0.0421 0.45 CD4_CTL L2
ENSG00000118515 SGK1 -952771 sc-eQTL 1.21e-01 0.113 0.0728 0.45 CD4_CTL L2
ENSG00000146409 SLC18B1 552002 sc-eQTL 1.20e-01 -0.132 0.0846 0.45 CD4_CTL L2
ENSG00000028839 TBPL1 -586829 sc-eQTL 7.58e-01 0.0222 0.0721 0.449 CD4_Naive L2
ENSG00000079950 STX7 852143 sc-eQTL 6.56e-01 0.0316 0.0707 0.449 CD4_Naive L2
ENSG00000112303 VNN2 601882 sc-eQTL 4.94e-01 -0.0448 0.0655 0.449 CD4_Naive L2
ENSG00000112306 RPS12 550772 sc-eQTL 8.52e-01 -0.00793 0.0425 0.449 CD4_Naive L2
ENSG00000118515 SGK1 -952771 sc-eQTL 7.09e-01 0.0194 0.0521 0.449 CD4_Naive L2
ENSG00000146409 SLC18B1 552002 sc-eQTL 2.39e-01 -0.0964 0.0816 0.449 CD4_Naive L2
ENSG00000028839 TBPL1 -586829 sc-eQTL 2.61e-01 -0.0871 0.0772 0.449 CD4_TCM L2
ENSG00000079950 STX7 852143 sc-eQTL 3.96e-01 -0.0662 0.0779 0.449 CD4_TCM L2
ENSG00000112303 VNN2 601882 sc-eQTL 6.62e-01 -0.0336 0.0768 0.449 CD4_TCM L2
ENSG00000112306 RPS12 550772 sc-eQTL 8.72e-01 -0.00643 0.0399 0.449 CD4_TCM L2
ENSG00000118515 SGK1 -952771 sc-eQTL 7.08e-01 -0.0209 0.0557 0.449 CD4_TCM L2
ENSG00000146409 SLC18B1 552002 sc-eQTL 5.27e-01 -0.0584 0.0922 0.449 CD4_TCM L2
ENSG00000028839 TBPL1 -586829 sc-eQTL 8.72e-01 0.0146 0.0903 0.449 CD4_TEM L2
ENSG00000079950 STX7 852143 sc-eQTL 7.09e-01 -0.0338 0.0903 0.449 CD4_TEM L2
ENSG00000112303 VNN2 601882 sc-eQTL 3.80e-01 -0.0762 0.0866 0.449 CD4_TEM L2
ENSG00000112306 RPS12 550772 sc-eQTL 5.99e-01 0.0187 0.0355 0.449 CD4_TEM L2
ENSG00000118515 SGK1 -952771 sc-eQTL 5.57e-01 0.0359 0.0611 0.449 CD4_TEM L2
ENSG00000146409 SLC18B1 552002 sc-eQTL 4.27e-01 -0.0702 0.0883 0.449 CD4_TEM L2
ENSG00000028839 TBPL1 -586829 sc-eQTL 6.18e-01 -0.04 0.0801 0.449 CD8_CTL L2
ENSG00000079950 STX7 852143 sc-eQTL 2.81e-02 -0.164 0.0741 0.449 CD8_CTL L2
ENSG00000112303 VNN2 601882 sc-eQTL 4.61e-01 0.0628 0.085 0.449 CD8_CTL L2
ENSG00000112306 RPS12 550772 sc-eQTL 4.96e-01 -0.0311 0.0455 0.449 CD8_CTL L2
ENSG00000118515 SGK1 -952771 sc-eQTL 5.01e-01 0.0519 0.0769 0.449 CD8_CTL L2
ENSG00000146409 SLC18B1 552002 sc-eQTL 3.36e-01 -0.0849 0.0881 0.449 CD8_CTL L2
ENSG00000028839 TBPL1 -586829 sc-eQTL 9.23e-01 0.00816 0.0838 0.449 CD8_Naive L2
ENSG00000079950 STX7 852143 sc-eQTL 4.20e-02 -0.181 0.0884 0.449 CD8_Naive L2
ENSG00000112303 VNN2 601882 sc-eQTL 8.52e-01 0.0144 0.077 0.449 CD8_Naive L2
ENSG00000112306 RPS12 550772 sc-eQTL 2.55e-01 0.0502 0.044 0.449 CD8_Naive L2
ENSG00000118515 SGK1 -952771 sc-eQTL 2.70e-01 0.061 0.0552 0.449 CD8_Naive L2
ENSG00000146409 SLC18B1 552002 sc-eQTL 3.11e-01 -0.0896 0.0883 0.449 CD8_Naive L2
ENSG00000028839 TBPL1 -586829 sc-eQTL 7.90e-01 0.0254 0.0951 0.444 CD8_TCM L2
ENSG00000079950 STX7 852143 sc-eQTL 8.34e-01 0.0185 0.088 0.444 CD8_TCM L2
ENSG00000112303 VNN2 601882 sc-eQTL 9.87e-01 0.00142 0.0874 0.444 CD8_TCM L2
ENSG00000112306 RPS12 550772 sc-eQTL 9.03e-01 0.00521 0.0426 0.444 CD8_TCM L2
ENSG00000118515 SGK1 -952771 sc-eQTL 5.38e-01 0.0434 0.0704 0.444 CD8_TCM L2
ENSG00000146409 SLC18B1 552002 sc-eQTL 2.53e-01 -0.107 0.093 0.444 CD8_TCM L2
ENSG00000028839 TBPL1 -586829 sc-eQTL 2.13e-02 0.201 0.0864 0.459 CD8_TEM L2
ENSG00000079950 STX7 852143 sc-eQTL 1.39e-02 0.234 0.0941 0.459 CD8_TEM L2
ENSG00000112303 VNN2 601882 sc-eQTL 8.23e-01 0.0212 0.095 0.459 CD8_TEM L2
ENSG00000112306 RPS12 550772 sc-eQTL 3.71e-01 -0.0457 0.051 0.459 CD8_TEM L2
ENSG00000118515 SGK1 -952771 sc-eQTL 6.83e-01 -0.0342 0.0837 0.459 CD8_TEM L2
ENSG00000146409 SLC18B1 552002 sc-eQTL 6.98e-01 0.0376 0.0966 0.459 CD8_TEM L2
ENSG00000028839 TBPL1 -586829 sc-eQTL 9.78e-01 0.0025 0.0914 0.45 MAIT L2
ENSG00000079950 STX7 852143 sc-eQTL 8.84e-01 0.0126 0.0868 0.45 MAIT L2
ENSG00000112303 VNN2 601882 sc-eQTL 5.69e-01 -0.0504 0.0882 0.45 MAIT L2
ENSG00000112306 RPS12 550772 sc-eQTL 4.84e-01 0.0304 0.0434 0.45 MAIT L2
ENSG00000118515 SGK1 -952771 sc-eQTL 3.01e-01 0.0633 0.061 0.45 MAIT L2
ENSG00000146409 SLC18B1 552002 sc-eQTL 4.19e-01 -0.0736 0.0909 0.45 MAIT L2
ENSG00000028839 TBPL1 -586829 sc-eQTL 8.63e-01 -0.0167 0.0966 0.451 NK_CD56bright L2
ENSG00000079950 STX7 852143 sc-eQTL 7.54e-01 -0.0281 0.0895 0.451 NK_CD56bright L2
ENSG00000112303 VNN2 601882 sc-eQTL 4.55e-01 -0.0679 0.0908 0.451 NK_CD56bright L2
ENSG00000112306 RPS12 550772 sc-eQTL 4.94e-01 -0.0347 0.0506 0.451 NK_CD56bright L2
ENSG00000118515 SGK1 -952771 sc-eQTL 7.82e-01 0.0209 0.0757 0.451 NK_CD56bright L2
ENSG00000028839 TBPL1 -586829 sc-eQTL 6.85e-01 0.0318 0.0785 0.444 NK_CD56dim L2
ENSG00000079950 STX7 852143 sc-eQTL 8.30e-01 -0.0155 0.0719 0.444 NK_CD56dim L2
ENSG00000112303 VNN2 601882 sc-eQTL 7.42e-01 0.0296 0.0899 0.444 NK_CD56dim L2
ENSG00000112306 RPS12 550772 sc-eQTL 3.88e-01 -0.0308 0.0356 0.444 NK_CD56dim L2
ENSG00000118515 SGK1 -952771 sc-eQTL 9.41e-01 0.00581 0.079 0.444 NK_CD56dim L2
ENSG00000028839 TBPL1 -586829 sc-eQTL 7.07e-01 0.037 0.0982 0.445 NK_HLA L2
ENSG00000079950 STX7 852143 sc-eQTL 8.90e-01 -0.0124 0.0894 0.445 NK_HLA L2
ENSG00000112303 VNN2 601882 sc-eQTL 7.12e-01 0.0335 0.0905 0.445 NK_HLA L2
ENSG00000112306 RPS12 550772 sc-eQTL 3.95e-01 -0.0359 0.0421 0.445 NK_HLA L2
ENSG00000118515 SGK1 -952771 sc-eQTL 6.33e-01 -0.0399 0.0833 0.445 NK_HLA L2
ENSG00000028839 TBPL1 -586829 sc-eQTL 9.57e-01 -0.00435 0.0815 0.444 NK_cytokine L2
ENSG00000079950 STX7 852143 sc-eQTL 3.67e-01 -0.0712 0.0788 0.444 NK_cytokine L2
ENSG00000112303 VNN2 601882 sc-eQTL 7.30e-01 0.0307 0.0888 0.444 NK_cytokine L2
ENSG00000112306 RPS12 550772 sc-eQTL 6.92e-01 -0.0191 0.0482 0.444 NK_cytokine L2
ENSG00000118515 SGK1 -952771 sc-eQTL 4.25e-01 0.064 0.0801 0.444 NK_cytokine L2
ENSG00000028839 TBPL1 -586829 sc-eQTL 5.95e-01 0.0602 0.113 0.448 PB L2
ENSG00000079931 MOXD1 963866 sc-eQTL 5.81e-01 -0.0533 0.0963 0.448 PB L2
ENSG00000079950 STX7 852143 sc-eQTL 9.10e-01 -0.00913 0.0805 0.448 PB L2
ENSG00000112303 VNN2 601882 sc-eQTL 8.23e-01 -0.0221 0.0983 0.448 PB L2
ENSG00000112306 RPS12 550772 sc-eQTL 3.64e-01 0.0507 0.0556 0.448 PB L2
ENSG00000118515 SGK1 -952771 sc-eQTL 1.55e-01 0.128 0.0894 0.448 PB L2
ENSG00000146409 SLC18B1 552002 sc-eQTL 6.29e-01 0.0507 0.105 0.448 PB L2
ENSG00000028839 TBPL1 -586829 sc-eQTL 3.07e-01 0.0926 0.0905 0.452 Pro_T L2
ENSG00000079950 STX7 852143 sc-eQTL 1.53e-01 -0.116 0.0806 0.452 Pro_T L2
ENSG00000112303 VNN2 601882 sc-eQTL 4.88e-01 0.0602 0.0868 0.452 Pro_T L2
ENSG00000112306 RPS12 550772 sc-eQTL 9.58e-01 0.00172 0.0329 0.452 Pro_T L2
ENSG00000118515 SGK1 -952771 sc-eQTL 4.30e-01 0.052 0.0658 0.452 Pro_T L2
ENSG00000146409 SLC18B1 552002 sc-eQTL 3.86e-01 -0.0738 0.0849 0.452 Pro_T L2
ENSG00000028839 TBPL1 -586829 sc-eQTL 2.88e-01 0.0981 0.0921 0.449 Treg L2
ENSG00000079950 STX7 852143 sc-eQTL 7.52e-01 -0.0276 0.0871 0.449 Treg L2
ENSG00000112303 VNN2 601882 sc-eQTL 8.02e-01 -0.0184 0.0733 0.449 Treg L2
ENSG00000112306 RPS12 550772 sc-eQTL 5.81e-01 0.0179 0.0324 0.449 Treg L2
ENSG00000118515 SGK1 -952771 sc-eQTL 9.78e-01 -0.00186 0.0683 0.449 Treg L2
ENSG00000146409 SLC18B1 552002 sc-eQTL 5.46e-01 0.0554 0.0915 0.449 Treg L2
ENSG00000028839 TBPL1 -586829 sc-eQTL 1.53e-01 -0.137 0.0951 0.454 cDC L2
ENSG00000079950 STX7 852143 sc-eQTL 8.96e-01 0.00985 0.0751 0.454 cDC L2
ENSG00000093134 VNN3 630576 sc-eQTL 6.16e-02 -0.139 0.0739 0.454 cDC L2
ENSG00000112299 VNN1 651286 sc-eQTL 2.68e-01 -0.0971 0.0874 0.454 cDC L2
ENSG00000112303 VNN2 601882 sc-eQTL 4.94e-01 -0.0585 0.0854 0.454 cDC L2
ENSG00000112306 RPS12 550772 sc-eQTL 7.44e-01 -0.0138 0.0422 0.454 cDC L2
ENSG00000118515 SGK1 -952771 sc-eQTL 9.09e-01 -0.00815 0.0711 0.454 cDC L2
ENSG00000146409 SLC18B1 552002 sc-eQTL 2.92e-01 -0.0881 0.0833 0.454 cDC L2
ENSG00000286438 AL591115.1 262213 sc-eQTL 3.34e-01 -0.0646 0.0666 0.454 cDC L2
ENSG00000286887 AL355881.1 -930960 sc-eQTL 6.64e-01 0.0357 0.0822 0.454 cDC L2
ENSG00000028839 TBPL1 -586829 sc-eQTL 4.61e-01 -0.0553 0.0749 0.449 cMono_IL1B L2
ENSG00000079950 STX7 852143 sc-eQTL 3.26e-01 0.0559 0.0567 0.449 cMono_IL1B L2
ENSG00000093134 VNN3 630576 sc-eQTL 1.64e-01 -0.112 0.08 0.449 cMono_IL1B L2
ENSG00000112299 VNN1 651286 sc-eQTL 6.84e-01 0.033 0.0811 0.449 cMono_IL1B L2
ENSG00000112303 VNN2 601882 sc-eQTL 2.03e-01 -0.0824 0.0646 0.449 cMono_IL1B L2
ENSG00000112306 RPS12 550772 sc-eQTL 2.86e-01 0.0384 0.0359 0.449 cMono_IL1B L2
ENSG00000118515 SGK1 -952771 sc-eQTL 8.74e-01 0.00852 0.0537 0.449 cMono_IL1B L2
ENSG00000146409 SLC18B1 552002 sc-eQTL 9.63e-01 0.00325 0.0695 0.449 cMono_IL1B L2
ENSG00000286887 AL355881.1 -930960 sc-eQTL 6.74e-01 0.0305 0.0723 0.449 cMono_IL1B L2
ENSG00000028839 TBPL1 -586829 sc-eQTL 8.16e-01 -0.0199 0.0852 0.449 cMono_S100A L2
ENSG00000079950 STX7 852143 sc-eQTL 1.89e-01 0.0809 0.0613 0.449 cMono_S100A L2
ENSG00000093134 VNN3 630576 sc-eQTL 2.06e-01 -0.0971 0.0766 0.449 cMono_S100A L2
ENSG00000112299 VNN1 651286 sc-eQTL 7.26e-01 0.0293 0.0835 0.449 cMono_S100A L2
ENSG00000112303 VNN2 601882 sc-eQTL 1.03e-01 -0.0891 0.0543 0.449 cMono_S100A L2
ENSG00000112306 RPS12 550772 sc-eQTL 1.67e-01 0.0544 0.0392 0.449 cMono_S100A L2
ENSG00000118515 SGK1 -952771 sc-eQTL 5.09e-01 0.0298 0.045 0.449 cMono_S100A L2
ENSG00000146409 SLC18B1 552002 sc-eQTL 9.09e-01 0.00834 0.0729 0.449 cMono_S100A L2
ENSG00000286887 AL355881.1 -930960 sc-eQTL 4.20e-01 0.0575 0.0712 0.449 cMono_S100A L2
ENSG00000028839 TBPL1 -586829 sc-eQTL 5.91e-01 0.0621 0.115 0.467 gdT L2
ENSG00000079950 STX7 852143 sc-eQTL 9.64e-01 0.00448 0.0992 0.467 gdT L2
ENSG00000112303 VNN2 601882 sc-eQTL 1.22e-01 0.169 0.109 0.467 gdT L2
ENSG00000112306 RPS12 550772 sc-eQTL 5.09e-01 -0.0277 0.0417 0.467 gdT L2
ENSG00000118515 SGK1 -952771 sc-eQTL 3.29e-01 0.0769 0.0786 0.467 gdT L2
ENSG00000146409 SLC18B1 552002 sc-eQTL 6.52e-01 0.0488 0.108 0.467 gdT L2
ENSG00000028839 TBPL1 -586829 sc-eQTL 2.18e-01 -0.105 0.0847 0.447 intMono L2
ENSG00000079950 STX7 852143 sc-eQTL 1.09e-01 0.13 0.0807 0.447 intMono L2
ENSG00000093134 VNN3 630576 sc-eQTL 2.48e-03 -0.246 0.0801 0.447 intMono L2
ENSG00000112299 VNN1 651286 sc-eQTL 4.55e-01 0.0607 0.0809 0.447 intMono L2
ENSG00000112303 VNN2 601882 sc-eQTL 1.30e-01 -0.124 0.0819 0.447 intMono L2
ENSG00000112306 RPS12 550772 sc-eQTL 5.93e-01 0.0192 0.0358 0.447 intMono L2
ENSG00000118515 SGK1 -952771 sc-eQTL 3.50e-01 0.0563 0.0601 0.447 intMono L2
ENSG00000146409 SLC18B1 552002 sc-eQTL 5.76e-01 0.0489 0.0872 0.447 intMono L2
ENSG00000286887 AL355881.1 -930960 sc-eQTL 1.16e-01 0.131 0.083 0.447 intMono L2
ENSG00000028839 TBPL1 -586829 sc-eQTL 8.71e-01 0.0147 0.0907 0.448 ncMono L2
ENSG00000079950 STX7 852143 sc-eQTL 9.91e-01 -0.000683 0.0613 0.448 ncMono L2
ENSG00000093134 VNN3 630576 sc-eQTL 2.66e-02 -0.191 0.0854 0.448 ncMono L2
ENSG00000112299 VNN1 651286 sc-eQTL 6.94e-01 0.0339 0.0858 0.448 ncMono L2
ENSG00000112303 VNN2 601882 sc-eQTL 3.85e-01 -0.0717 0.0824 0.448 ncMono L2
ENSG00000112306 RPS12 550772 sc-eQTL 7.50e-01 0.0132 0.0414 0.448 ncMono L2
ENSG00000118515 SGK1 -952771 sc-eQTL 3.80e-01 0.0514 0.0585 0.448 ncMono L2
ENSG00000146409 SLC18B1 552002 sc-eQTL 6.17e-01 0.0366 0.0731 0.448 ncMono L2
ENSG00000286887 AL355881.1 -930960 sc-eQTL 5.79e-01 -0.043 0.0773 0.448 ncMono L2
ENSG00000028839 TBPL1 -586829 sc-eQTL 9.08e-01 0.0121 0.105 0.455 pDC L2
ENSG00000079950 STX7 852143 sc-eQTL 6.07e-01 -0.0359 0.0696 0.455 pDC L2
ENSG00000093134 VNN3 630576 sc-eQTL 4.29e-01 -0.0556 0.07 0.455 pDC L2
ENSG00000112299 VNN1 651286 sc-eQTL 1.65e-01 -0.099 0.071 0.455 pDC L2
ENSG00000112303 VNN2 601882 sc-eQTL 7.36e-02 -0.152 0.0841 0.455 pDC L2
ENSG00000112306 RPS12 550772 sc-eQTL 4.03e-01 0.0489 0.0584 0.455 pDC L2
ENSG00000118515 SGK1 -952771 sc-eQTL 4.30e-01 -0.047 0.0594 0.455 pDC L2
ENSG00000146409 SLC18B1 552002 sc-eQTL 1.62e-01 0.121 0.0861 0.455 pDC L2
ENSG00000286438 AL591115.1 262213 sc-eQTL 3.80e-01 -0.0728 0.0827 0.455 pDC L2
ENSG00000286887 AL355881.1 -930960 sc-eQTL 5.65e-01 0.0424 0.0735 0.455 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -586829 sc-eQTL 9.38e-01 -0.00709 0.0907 0.449 B_Memory LOneK1K
ENSG00000079931 MOXD1 963866 sc-eQTL 5.57e-02 -0.168 0.0873 0.449 B_Memory LOneK1K
ENSG00000079950 STX7 852143 sc-eQTL 8.94e-02 -0.0846 0.0496 0.449 B_Memory LOneK1K
ENSG00000112303 VNN2 601882 sc-eQTL 9.67e-02 -0.131 0.0784 0.449 B_Memory LOneK1K
ENSG00000112306 RPS12 550772 sc-eQTL 6.71e-01 -0.0191 0.045 0.449 B_Memory LOneK1K
ENSG00000118515 SGK1 -952771 sc-eQTL 3.47e-01 0.0661 0.0702 0.449 B_Memory LOneK1K
ENSG00000146409 SLC18B1 552002 sc-eQTL 5.14e-01 0.0539 0.0825 0.449 B_Memory LOneK1K
ENSG00000028839 TBPL1 -586829 sc-eQTL 3.23e-01 -0.0847 0.0855 0.449 B_Naive LOneK1K
ENSG00000079931 MOXD1 963866 sc-eQTL 6.55e-02 -0.173 0.0933 0.449 B_Naive LOneK1K
ENSG00000079950 STX7 852143 sc-eQTL 9.96e-01 0.000198 0.0386 0.449 B_Naive LOneK1K
ENSG00000112303 VNN2 601882 sc-eQTL 8.82e-01 0.0111 0.075 0.449 B_Naive LOneK1K
ENSG00000112306 RPS12 550772 sc-eQTL 1.92e-01 -0.0591 0.0452 0.449 B_Naive LOneK1K
ENSG00000118515 SGK1 -952771 sc-eQTL 7.11e-01 -0.026 0.0702 0.449 B_Naive LOneK1K
ENSG00000146409 SLC18B1 552002 sc-eQTL 2.43e-01 -0.0998 0.0853 0.449 B_Naive LOneK1K
ENSG00000028839 TBPL1 -586829 sc-eQTL 5.27e-01 -0.0434 0.0686 0.449 CD14_Mono LOneK1K
ENSG00000079950 STX7 852143 sc-eQTL 1.22e-01 0.0737 0.0475 0.449 CD14_Mono LOneK1K
ENSG00000093134 VNN3 630576 sc-eQTL 2.13e-01 -0.0967 0.0775 0.449 CD14_Mono LOneK1K
ENSG00000112299 VNN1 651286 sc-eQTL 5.07e-01 0.0538 0.081 0.449 CD14_Mono LOneK1K
ENSG00000112303 VNN2 601882 sc-eQTL 3.56e-01 -0.0495 0.0535 0.449 CD14_Mono LOneK1K
ENSG00000112306 RPS12 550772 sc-eQTL 2.10e-01 0.0461 0.0366 0.449 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -952771 sc-eQTL 8.02e-01 0.0126 0.0501 0.449 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 552002 sc-eQTL 8.65e-01 0.0112 0.0655 0.449 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -930960 sc-eQTL 8.14e-01 0.0162 0.0686 0.449 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -586829 sc-eQTL 5.49e-01 -0.0524 0.0874 0.446 CD16_Mono LOneK1K
ENSG00000079950 STX7 852143 sc-eQTL 3.49e-01 0.0541 0.0576 0.446 CD16_Mono LOneK1K
ENSG00000093134 VNN3 630576 sc-eQTL 2.85e-03 -0.251 0.0831 0.446 CD16_Mono LOneK1K
ENSG00000112299 VNN1 651286 sc-eQTL 8.33e-01 0.0177 0.0841 0.446 CD16_Mono LOneK1K
ENSG00000112303 VNN2 601882 sc-eQTL 1.46e-01 -0.115 0.0789 0.446 CD16_Mono LOneK1K
ENSG00000112306 RPS12 550772 sc-eQTL 8.09e-01 0.00814 0.0337 0.446 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -952771 sc-eQTL 3.11e-01 0.0516 0.0508 0.446 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 552002 sc-eQTL 6.58e-01 0.0362 0.0817 0.446 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -930960 sc-eQTL 2.01e-01 0.0944 0.0736 0.446 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -586829 sc-eQTL 9.42e-01 0.00528 0.0728 0.444 NK_CD56dim LOneK1K
ENSG00000079950 STX7 852143 sc-eQTL 5.94e-01 -0.0365 0.0684 0.444 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 601882 sc-eQTL 8.40e-01 -0.0175 0.0866 0.444 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 550772 sc-eQTL 9.92e-01 0.000337 0.0353 0.444 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -952771 sc-eQTL 7.44e-01 0.0239 0.073 0.444 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000093134 VNN3 630576 eQTL 0.0275 -0.0322 0.0146 0.0 0.0 0.457

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000093134 VNN3 630576 3.21e-07 1.59e-07 6.86e-08 2.27e-07 1.07e-07 8.4e-08 2.24e-07 6.12e-08 1.85e-07 1.05e-07 1.76e-07 1.52e-07 2.38e-07 8.15e-08 6.2e-08 9.48e-08 5.27e-08 1.91e-07 7.42e-08 6.02e-08 1.24e-07 1.76e-07 1.64e-07 4.07e-08 2.28e-07 1.43e-07 1.31e-07 1.28e-07 1.39e-07 1.33e-07 1.26e-07 4.93e-08 4.16e-08 9.58e-08 5.16e-08 3.3e-08 4.47e-08 7.68e-08 6.33e-08 6.31e-08 4.53e-08 1.55e-07 3.02e-08 1.43e-08 3.3e-08 6.83e-09 8.21e-08 0.0 4.68e-08