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Genes within 1Mb (chr6:133351090:C:CT):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -601080 sc-eQTL 9.56e-01 0.00502 0.0915 0.297 B L1
ENSG00000079931 MOXD1 949615 sc-eQTL 1.77e-02 0.228 0.0953 0.297 B L1
ENSG00000079950 STX7 837892 sc-eQTL 3.40e-01 0.0348 0.0364 0.297 B L1
ENSG00000112303 VNN2 587631 sc-eQTL 8.35e-01 0.0143 0.0685 0.297 B L1
ENSG00000112306 RPS12 536521 sc-eQTL 1.56e-01 0.0588 0.0412 0.297 B L1
ENSG00000118515 SGK1 -967022 sc-eQTL 2.22e-01 -0.078 0.0637 0.297 B L1
ENSG00000146409 SLC18B1 537751 sc-eQTL 2.50e-01 0.1 0.0869 0.297 B L1
ENSG00000028839 TBPL1 -601080 sc-eQTL 3.82e-01 0.0589 0.0672 0.297 CD4T L1
ENSG00000079950 STX7 837892 sc-eQTL 4.37e-01 0.0544 0.0699 0.297 CD4T L1
ENSG00000112303 VNN2 587631 sc-eQTL 3.43e-01 0.0575 0.0605 0.297 CD4T L1
ENSG00000112306 RPS12 536521 sc-eQTL 5.13e-01 0.027 0.0412 0.297 CD4T L1
ENSG00000118515 SGK1 -967022 sc-eQTL 5.42e-01 -0.0338 0.0553 0.297 CD4T L1
ENSG00000146409 SLC18B1 537751 sc-eQTL 5.27e-01 0.0528 0.0833 0.297 CD4T L1
ENSG00000028839 TBPL1 -601080 sc-eQTL 1.84e-01 0.0884 0.0663 0.297 CD8T L1
ENSG00000079950 STX7 837892 sc-eQTL 2.26e-01 0.0841 0.0693 0.297 CD8T L1
ENSG00000112303 VNN2 587631 sc-eQTL 9.52e-01 -0.00489 0.0811 0.297 CD8T L1
ENSG00000112306 RPS12 536521 sc-eQTL 6.22e-01 0.0137 0.0277 0.297 CD8T L1
ENSG00000118515 SGK1 -967022 sc-eQTL 3.93e-01 -0.0365 0.0427 0.297 CD8T L1
ENSG00000146409 SLC18B1 537751 sc-eQTL 9.23e-01 0.00816 0.0838 0.297 CD8T L1
ENSG00000028839 TBPL1 -601080 sc-eQTL 2.57e-01 0.114 0.1 0.295 DC L1
ENSG00000079950 STX7 837892 sc-eQTL 5.30e-01 0.0393 0.0624 0.295 DC L1
ENSG00000093134 VNN3 616325 sc-eQTL 4.80e-01 0.0548 0.0774 0.295 DC L1
ENSG00000112299 VNN1 637035 sc-eQTL 9.44e-01 0.00592 0.0836 0.295 DC L1
ENSG00000112303 VNN2 587631 sc-eQTL 5.48e-02 0.171 0.0886 0.295 DC L1
ENSG00000112306 RPS12 536521 sc-eQTL 6.13e-01 0.0254 0.0501 0.295 DC L1
ENSG00000118515 SGK1 -967022 sc-eQTL 4.30e-01 -0.046 0.0581 0.295 DC L1
ENSG00000146409 SLC18B1 537751 sc-eQTL 3.96e-01 -0.0673 0.0792 0.295 DC L1
ENSG00000286438 AL591115.1 247962 sc-eQTL 8.90e-01 0.01 0.0722 0.295 DC L1
ENSG00000286887 AL355881.1 -945211 sc-eQTL 3.91e-01 -0.0773 0.0899 0.295 DC L1
ENSG00000028839 TBPL1 -601080 sc-eQTL 5.07e-01 0.0469 0.0706 0.297 Mono L1
ENSG00000079950 STX7 837892 sc-eQTL 7.24e-01 0.0167 0.0472 0.297 Mono L1
ENSG00000093134 VNN3 616325 sc-eQTL 8.92e-02 0.138 0.0806 0.297 Mono L1
ENSG00000112299 VNN1 637035 sc-eQTL 6.31e-01 -0.042 0.0872 0.297 Mono L1
ENSG00000112303 VNN2 587631 sc-eQTL 5.72e-01 -0.0348 0.0615 0.297 Mono L1
ENSG00000112306 RPS12 536521 sc-eQTL 3.33e-01 -0.0357 0.0368 0.297 Mono L1
ENSG00000118515 SGK1 -967022 sc-eQTL 3.76e-01 -0.0461 0.052 0.297 Mono L1
ENSG00000146409 SLC18B1 537751 sc-eQTL 8.50e-01 -0.0138 0.073 0.297 Mono L1
ENSG00000286887 AL355881.1 -945211 sc-eQTL 6.03e-02 -0.134 0.0712 0.297 Mono L1
ENSG00000028839 TBPL1 -601080 sc-eQTL 8.83e-01 -0.0116 0.0787 0.298 NK L1
ENSG00000079950 STX7 837892 sc-eQTL 1.68e-01 0.1 0.0725 0.298 NK L1
ENSG00000112303 VNN2 587631 sc-eQTL 3.37e-01 0.0871 0.0904 0.298 NK L1
ENSG00000112306 RPS12 536521 sc-eQTL 6.29e-01 -0.0182 0.0375 0.298 NK L1
ENSG00000118515 SGK1 -967022 sc-eQTL 5.66e-01 -0.0399 0.0693 0.298 NK L1
ENSG00000028839 TBPL1 -601080 sc-eQTL 1.22e-01 -0.141 0.0912 0.297 Other_T L1
ENSG00000079950 STX7 837892 sc-eQTL 9.42e-01 0.00525 0.0722 0.297 Other_T L1
ENSG00000112303 VNN2 587631 sc-eQTL 7.78e-01 -0.0247 0.0873 0.297 Other_T L1
ENSG00000112306 RPS12 536521 sc-eQTL 7.15e-01 -0.0127 0.0346 0.297 Other_T L1
ENSG00000118515 SGK1 -967022 sc-eQTL 1.05e-01 -0.103 0.0633 0.297 Other_T L1
ENSG00000146409 SLC18B1 537751 sc-eQTL 2.58e-01 0.107 0.0945 0.297 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -601080 sc-eQTL 4.48e-01 0.0816 0.107 0.293 B_Activated L2
ENSG00000079931 MOXD1 949615 sc-eQTL 4.36e-01 0.0764 0.0979 0.293 B_Activated L2
ENSG00000079950 STX7 837892 sc-eQTL 9.21e-01 -0.0091 0.092 0.293 B_Activated L2
ENSG00000112303 VNN2 587631 sc-eQTL 4.77e-01 0.0696 0.0977 0.293 B_Activated L2
ENSG00000112306 RPS12 536521 sc-eQTL 8.07e-01 0.0128 0.0524 0.293 B_Activated L2
ENSG00000118515 SGK1 -967022 sc-eQTL 4.12e-01 -0.0768 0.0933 0.293 B_Activated L2
ENSG00000146409 SLC18B1 537751 sc-eQTL 4.53e-01 0.069 0.0917 0.293 B_Activated L2
ENSG00000028839 TBPL1 -601080 sc-eQTL 1.10e-01 0.162 0.101 0.294 B_Intermediate L2
ENSG00000079931 MOXD1 949615 sc-eQTL 2.99e-04 0.318 0.0866 0.294 B_Intermediate L2
ENSG00000079950 STX7 837892 sc-eQTL 9.38e-02 0.0978 0.0581 0.294 B_Intermediate L2
ENSG00000112303 VNN2 587631 sc-eQTL 2.93e-01 0.0925 0.0878 0.294 B_Intermediate L2
ENSG00000112306 RPS12 536521 sc-eQTL 1.39e-01 0.0797 0.0536 0.294 B_Intermediate L2
ENSG00000118515 SGK1 -967022 sc-eQTL 9.90e-01 0.00121 0.0932 0.294 B_Intermediate L2
ENSG00000146409 SLC18B1 537751 sc-eQTL 5.13e-01 -0.0636 0.097 0.294 B_Intermediate L2
ENSG00000028839 TBPL1 -601080 sc-eQTL 2.53e-02 -0.215 0.0955 0.297 B_Memory L2
ENSG00000079931 MOXD1 949615 sc-eQTL 8.66e-01 -0.0151 0.0891 0.297 B_Memory L2
ENSG00000079950 STX7 837892 sc-eQTL 9.50e-03 0.18 0.0688 0.297 B_Memory L2
ENSG00000112303 VNN2 587631 sc-eQTL 1.59e-01 0.129 0.091 0.297 B_Memory L2
ENSG00000112306 RPS12 536521 sc-eQTL 2.06e-01 0.0557 0.0439 0.297 B_Memory L2
ENSG00000118515 SGK1 -967022 sc-eQTL 3.75e-01 0.0717 0.0807 0.297 B_Memory L2
ENSG00000146409 SLC18B1 537751 sc-eQTL 5.56e-01 0.0542 0.0919 0.297 B_Memory L2
ENSG00000028839 TBPL1 -601080 sc-eQTL 7.67e-01 0.0269 0.091 0.297 B_Naive1 L2
ENSG00000079931 MOXD1 949615 sc-eQTL 1.73e-02 0.237 0.0987 0.297 B_Naive1 L2
ENSG00000079950 STX7 837892 sc-eQTL 9.88e-01 -0.000661 0.0437 0.297 B_Naive1 L2
ENSG00000112303 VNN2 587631 sc-eQTL 7.55e-01 -0.0266 0.0849 0.297 B_Naive1 L2
ENSG00000112306 RPS12 536521 sc-eQTL 4.05e-01 0.0403 0.0483 0.297 B_Naive1 L2
ENSG00000118515 SGK1 -967022 sc-eQTL 8.83e-01 0.0112 0.0757 0.297 B_Naive1 L2
ENSG00000146409 SLC18B1 537751 sc-eQTL 4.87e-01 0.065 0.0932 0.297 B_Naive1 L2
ENSG00000028839 TBPL1 -601080 sc-eQTL 9.06e-01 -0.0116 0.098 0.298 B_Naive2 L2
ENSG00000079931 MOXD1 949615 sc-eQTL 9.10e-01 -0.0108 0.0955 0.298 B_Naive2 L2
ENSG00000079950 STX7 837892 sc-eQTL 6.05e-01 0.0269 0.052 0.298 B_Naive2 L2
ENSG00000112303 VNN2 587631 sc-eQTL 9.69e-01 0.00376 0.0955 0.298 B_Naive2 L2
ENSG00000112306 RPS12 536521 sc-eQTL 1.86e-02 0.118 0.0499 0.298 B_Naive2 L2
ENSG00000118515 SGK1 -967022 sc-eQTL 4.90e-01 -0.0618 0.0893 0.298 B_Naive2 L2
ENSG00000146409 SLC18B1 537751 sc-eQTL 1.53e-01 0.138 0.096 0.298 B_Naive2 L2
ENSG00000028839 TBPL1 -601080 sc-eQTL 8.93e-01 0.0131 0.097 0.295 CD4_CTL L2
ENSG00000079950 STX7 837892 sc-eQTL 9.33e-01 -0.00809 0.0963 0.295 CD4_CTL L2
ENSG00000112303 VNN2 587631 sc-eQTL 9.32e-03 0.251 0.0955 0.295 CD4_CTL L2
ENSG00000112306 RPS12 536521 sc-eQTL 1.65e-01 0.0622 0.0447 0.295 CD4_CTL L2
ENSG00000118515 SGK1 -967022 sc-eQTL 9.56e-01 -0.00435 0.0778 0.295 CD4_CTL L2
ENSG00000146409 SLC18B1 537751 sc-eQTL 5.76e-01 0.0506 0.0905 0.295 CD4_CTL L2
ENSG00000028839 TBPL1 -601080 sc-eQTL 2.20e-01 -0.0939 0.0762 0.297 CD4_Naive L2
ENSG00000079950 STX7 837892 sc-eQTL 5.59e-01 -0.0439 0.075 0.297 CD4_Naive L2
ENSG00000112303 VNN2 587631 sc-eQTL 8.08e-01 0.0169 0.0695 0.297 CD4_Naive L2
ENSG00000112306 RPS12 536521 sc-eQTL 3.76e-01 0.04 0.045 0.297 CD4_Naive L2
ENSG00000118515 SGK1 -967022 sc-eQTL 4.04e-01 -0.0461 0.0551 0.297 CD4_Naive L2
ENSG00000146409 SLC18B1 537751 sc-eQTL 7.22e-01 0.0309 0.0868 0.297 CD4_Naive L2
ENSG00000028839 TBPL1 -601080 sc-eQTL 9.87e-03 0.214 0.0822 0.297 CD4_TCM L2
ENSG00000079950 STX7 837892 sc-eQTL 5.73e-02 0.159 0.0834 0.297 CD4_TCM L2
ENSG00000112303 VNN2 587631 sc-eQTL 6.05e-01 0.0429 0.0829 0.297 CD4_TCM L2
ENSG00000112306 RPS12 536521 sc-eQTL 7.43e-01 0.0141 0.043 0.297 CD4_TCM L2
ENSG00000118515 SGK1 -967022 sc-eQTL 5.04e-01 -0.0402 0.0601 0.297 CD4_TCM L2
ENSG00000146409 SLC18B1 537751 sc-eQTL 2.60e-01 0.112 0.0993 0.297 CD4_TCM L2
ENSG00000028839 TBPL1 -601080 sc-eQTL 2.23e-01 0.119 0.0975 0.297 CD4_TEM L2
ENSG00000079950 STX7 837892 sc-eQTL 1.55e-01 -0.139 0.0975 0.297 CD4_TEM L2
ENSG00000112303 VNN2 587631 sc-eQTL 1.11e-01 0.15 0.0935 0.297 CD4_TEM L2
ENSG00000112306 RPS12 536521 sc-eQTL 8.41e-01 0.00776 0.0386 0.297 CD4_TEM L2
ENSG00000118515 SGK1 -967022 sc-eQTL 4.48e-01 -0.0504 0.0662 0.297 CD4_TEM L2
ENSG00000146409 SLC18B1 537751 sc-eQTL 5.56e-02 0.183 0.095 0.297 CD4_TEM L2
ENSG00000028839 TBPL1 -601080 sc-eQTL 7.01e-01 0.0327 0.085 0.297 CD8_CTL L2
ENSG00000079950 STX7 837892 sc-eQTL 2.43e-01 0.0928 0.0792 0.297 CD8_CTL L2
ENSG00000112303 VNN2 587631 sc-eQTL 7.55e-01 -0.0282 0.0903 0.297 CD8_CTL L2
ENSG00000112306 RPS12 536521 sc-eQTL 9.64e-01 0.00216 0.0483 0.297 CD8_CTL L2
ENSG00000118515 SGK1 -967022 sc-eQTL 2.73e-01 -0.0895 0.0814 0.297 CD8_CTL L2
ENSG00000146409 SLC18B1 537751 sc-eQTL 8.54e-01 0.0172 0.0937 0.297 CD8_CTL L2
ENSG00000028839 TBPL1 -601080 sc-eQTL 5.52e-01 0.0533 0.0896 0.297 CD8_Naive L2
ENSG00000079950 STX7 837892 sc-eQTL 1.49e-01 0.138 0.0951 0.297 CD8_Naive L2
ENSG00000112303 VNN2 587631 sc-eQTL 3.93e-01 -0.0704 0.0823 0.297 CD8_Naive L2
ENSG00000112306 RPS12 536521 sc-eQTL 6.30e-01 -0.0228 0.0472 0.297 CD8_Naive L2
ENSG00000118515 SGK1 -967022 sc-eQTL 1.12e-01 -0.0939 0.0589 0.297 CD8_Naive L2
ENSG00000146409 SLC18B1 537751 sc-eQTL 3.51e-01 0.0884 0.0945 0.297 CD8_Naive L2
ENSG00000028839 TBPL1 -601080 sc-eQTL 2.58e-01 -0.116 0.102 0.299 CD8_TCM L2
ENSG00000079950 STX7 837892 sc-eQTL 3.53e-01 0.0878 0.0944 0.299 CD8_TCM L2
ENSG00000112303 VNN2 587631 sc-eQTL 4.91e-01 -0.0647 0.0938 0.299 CD8_TCM L2
ENSG00000112306 RPS12 536521 sc-eQTL 2.58e-01 0.0518 0.0456 0.299 CD8_TCM L2
ENSG00000118515 SGK1 -967022 sc-eQTL 1.74e-01 -0.103 0.0754 0.299 CD8_TCM L2
ENSG00000146409 SLC18B1 537751 sc-eQTL 8.83e-01 -0.0148 0.1 0.299 CD8_TCM L2
ENSG00000028839 TBPL1 -601080 sc-eQTL 4.50e-01 -0.0703 0.0929 0.29 CD8_TEM L2
ENSG00000079950 STX7 837892 sc-eQTL 7.74e-02 -0.179 0.101 0.29 CD8_TEM L2
ENSG00000112303 VNN2 587631 sc-eQTL 7.33e-01 0.0345 0.101 0.29 CD8_TEM L2
ENSG00000112306 RPS12 536521 sc-eQTL 4.85e-01 0.0379 0.0542 0.29 CD8_TEM L2
ENSG00000118515 SGK1 -967022 sc-eQTL 8.49e-01 -0.0169 0.089 0.29 CD8_TEM L2
ENSG00000146409 SLC18B1 537751 sc-eQTL 3.49e-01 0.0962 0.102 0.29 CD8_TEM L2
ENSG00000028839 TBPL1 -601080 sc-eQTL 1.38e-01 -0.143 0.0964 0.299 MAIT L2
ENSG00000079950 STX7 837892 sc-eQTL 8.43e-01 0.0182 0.0921 0.299 MAIT L2
ENSG00000112303 VNN2 587631 sc-eQTL 9.07e-01 -0.0109 0.0937 0.299 MAIT L2
ENSG00000112306 RPS12 536521 sc-eQTL 7.86e-01 -0.0126 0.0461 0.299 MAIT L2
ENSG00000118515 SGK1 -967022 sc-eQTL 4.81e-01 -0.0458 0.0648 0.299 MAIT L2
ENSG00000146409 SLC18B1 537751 sc-eQTL 6.71e-01 0.0411 0.0965 0.299 MAIT L2
ENSG00000028839 TBPL1 -601080 sc-eQTL 5.31e-01 0.0642 0.102 0.296 NK_CD56bright L2
ENSG00000079950 STX7 837892 sc-eQTL 6.25e-01 -0.0465 0.0949 0.296 NK_CD56bright L2
ENSG00000112303 VNN2 587631 sc-eQTL 9.92e-01 0.000924 0.0964 0.296 NK_CD56bright L2
ENSG00000112306 RPS12 536521 sc-eQTL 6.77e-01 0.0224 0.0537 0.296 NK_CD56bright L2
ENSG00000118515 SGK1 -967022 sc-eQTL 9.08e-01 0.00929 0.0803 0.296 NK_CD56bright L2
ENSG00000028839 TBPL1 -601080 sc-eQTL 4.31e-01 -0.0667 0.0845 0.3 NK_CD56dim L2
ENSG00000079950 STX7 837892 sc-eQTL 5.24e-01 0.0494 0.0774 0.3 NK_CD56dim L2
ENSG00000112303 VNN2 587631 sc-eQTL 4.29e-01 0.0766 0.0967 0.3 NK_CD56dim L2
ENSG00000112306 RPS12 536521 sc-eQTL 9.98e-01 -7.31e-05 0.0384 0.3 NK_CD56dim L2
ENSG00000118515 SGK1 -967022 sc-eQTL 8.59e-01 -0.0152 0.0851 0.3 NK_CD56dim L2
ENSG00000028839 TBPL1 -601080 sc-eQTL 6.72e-01 -0.0434 0.102 0.301 NK_HLA L2
ENSG00000079950 STX7 837892 sc-eQTL 4.64e-01 0.0681 0.093 0.301 NK_HLA L2
ENSG00000112303 VNN2 587631 sc-eQTL 8.21e-01 -0.0214 0.0942 0.301 NK_HLA L2
ENSG00000112306 RPS12 536521 sc-eQTL 8.38e-01 0.00899 0.0439 0.301 NK_HLA L2
ENSG00000118515 SGK1 -967022 sc-eQTL 7.19e-01 0.0313 0.0868 0.301 NK_HLA L2
ENSG00000028839 TBPL1 -601080 sc-eQTL 7.22e-01 0.0308 0.0865 0.3 NK_cytokine L2
ENSG00000079950 STX7 837892 sc-eQTL 4.18e-01 0.0679 0.0837 0.3 NK_cytokine L2
ENSG00000112303 VNN2 587631 sc-eQTL 6.38e-01 0.0443 0.0942 0.3 NK_cytokine L2
ENSG00000112306 RPS12 536521 sc-eQTL 5.66e-01 0.0294 0.0511 0.3 NK_cytokine L2
ENSG00000118515 SGK1 -967022 sc-eQTL 1.19e-02 -0.213 0.0838 0.3 NK_cytokine L2
ENSG00000028839 TBPL1 -601080 sc-eQTL 4.16e-01 -0.0934 0.115 0.3 PB L2
ENSG00000079931 MOXD1 949615 sc-eQTL 6.63e-01 0.0428 0.0979 0.3 PB L2
ENSG00000079950 STX7 837892 sc-eQTL 6.37e-01 0.0386 0.0818 0.3 PB L2
ENSG00000112303 VNN2 587631 sc-eQTL 5.73e-01 0.0565 0.0999 0.3 PB L2
ENSG00000112306 RPS12 536521 sc-eQTL 3.42e-01 -0.0539 0.0565 0.3 PB L2
ENSG00000118515 SGK1 -967022 sc-eQTL 2.49e-01 -0.106 0.0912 0.3 PB L2
ENSG00000146409 SLC18B1 537751 sc-eQTL 9.96e-01 0.000523 0.106 0.3 PB L2
ENSG00000028839 TBPL1 -601080 sc-eQTL 8.86e-01 0.0138 0.0966 0.298 Pro_T L2
ENSG00000079950 STX7 837892 sc-eQTL 2.44e-01 0.101 0.086 0.298 Pro_T L2
ENSG00000112303 VNN2 587631 sc-eQTL 6.05e-01 -0.0479 0.0925 0.298 Pro_T L2
ENSG00000112306 RPS12 536521 sc-eQTL 5.84e-01 -0.0192 0.035 0.298 Pro_T L2
ENSG00000118515 SGK1 -967022 sc-eQTL 3.79e-01 -0.0618 0.0701 0.298 Pro_T L2
ENSG00000146409 SLC18B1 537751 sc-eQTL 1.11e-01 0.144 0.0901 0.298 Pro_T L2
ENSG00000028839 TBPL1 -601080 sc-eQTL 6.16e-01 -0.049 0.0976 0.297 Treg L2
ENSG00000079950 STX7 837892 sc-eQTL 5.87e-01 0.05 0.092 0.297 Treg L2
ENSG00000112303 VNN2 587631 sc-eQTL 8.74e-01 -0.0123 0.0774 0.297 Treg L2
ENSG00000112306 RPS12 536521 sc-eQTL 9.13e-01 -0.00373 0.0343 0.297 Treg L2
ENSG00000118515 SGK1 -967022 sc-eQTL 5.38e-01 0.0445 0.0721 0.297 Treg L2
ENSG00000146409 SLC18B1 537751 sc-eQTL 5.10e-01 0.0638 0.0967 0.297 Treg L2
ENSG00000028839 TBPL1 -601080 sc-eQTL 5.17e-01 0.0672 0.104 0.285 cDC L2
ENSG00000079950 STX7 837892 sc-eQTL 7.72e-01 -0.0236 0.0814 0.285 cDC L2
ENSG00000093134 VNN3 616325 sc-eQTL 2.37e-01 0.0956 0.0805 0.285 cDC L2
ENSG00000112299 VNN1 637035 sc-eQTL 4.52e-01 0.0715 0.0949 0.285 cDC L2
ENSG00000112303 VNN2 587631 sc-eQTL 2.75e-01 0.101 0.0923 0.285 cDC L2
ENSG00000112306 RPS12 536521 sc-eQTL 9.85e-01 0.000844 0.0457 0.285 cDC L2
ENSG00000118515 SGK1 -967022 sc-eQTL 1.59e-01 -0.108 0.0766 0.285 cDC L2
ENSG00000146409 SLC18B1 537751 sc-eQTL 5.56e-01 0.0533 0.0905 0.285 cDC L2
ENSG00000286438 AL591115.1 247962 sc-eQTL 7.05e-01 0.0275 0.0724 0.285 cDC L2
ENSG00000286887 AL355881.1 -945211 sc-eQTL 3.36e-01 -0.0856 0.0888 0.285 cDC L2
ENSG00000028839 TBPL1 -601080 sc-eQTL 7.32e-01 0.028 0.0814 0.297 cMono_IL1B L2
ENSG00000079950 STX7 837892 sc-eQTL 6.01e-01 0.0323 0.0617 0.297 cMono_IL1B L2
ENSG00000093134 VNN3 616325 sc-eQTL 1.39e-01 0.129 0.0869 0.297 cMono_IL1B L2
ENSG00000112299 VNN1 637035 sc-eQTL 6.21e-01 -0.0437 0.088 0.297 cMono_IL1B L2
ENSG00000112303 VNN2 587631 sc-eQTL 8.74e-01 0.0112 0.0704 0.297 cMono_IL1B L2
ENSG00000112306 RPS12 536521 sc-eQTL 3.20e-01 -0.0389 0.039 0.297 cMono_IL1B L2
ENSG00000118515 SGK1 -967022 sc-eQTL 2.11e-01 -0.073 0.0581 0.297 cMono_IL1B L2
ENSG00000146409 SLC18B1 537751 sc-eQTL 4.40e-01 -0.0583 0.0754 0.297 cMono_IL1B L2
ENSG00000286887 AL355881.1 -945211 sc-eQTL 5.11e-02 -0.153 0.0779 0.297 cMono_IL1B L2
ENSG00000028839 TBPL1 -601080 sc-eQTL 7.51e-01 0.0291 0.0917 0.297 cMono_S100A L2
ENSG00000079950 STX7 837892 sc-eQTL 9.97e-01 -0.000261 0.0663 0.297 cMono_S100A L2
ENSG00000093134 VNN3 616325 sc-eQTL 5.00e-02 0.162 0.082 0.297 cMono_S100A L2
ENSG00000112299 VNN1 637035 sc-eQTL 5.30e-01 0.0565 0.0898 0.297 cMono_S100A L2
ENSG00000112303 VNN2 587631 sc-eQTL 8.50e-01 -0.0111 0.0588 0.297 cMono_S100A L2
ENSG00000112306 RPS12 536521 sc-eQTL 3.60e-01 -0.0388 0.0423 0.297 cMono_S100A L2
ENSG00000118515 SGK1 -967022 sc-eQTL 2.03e-01 -0.0617 0.0483 0.297 cMono_S100A L2
ENSG00000146409 SLC18B1 537751 sc-eQTL 8.90e-01 -0.0108 0.0784 0.297 cMono_S100A L2
ENSG00000286887 AL355881.1 -945211 sc-eQTL 2.61e-02 -0.17 0.0758 0.297 cMono_S100A L2
ENSG00000028839 TBPL1 -601080 sc-eQTL 3.01e-01 -0.129 0.125 0.282 gdT L2
ENSG00000079950 STX7 837892 sc-eQTL 8.72e-01 0.0174 0.108 0.282 gdT L2
ENSG00000112303 VNN2 587631 sc-eQTL 3.31e-01 -0.116 0.119 0.282 gdT L2
ENSG00000112306 RPS12 536521 sc-eQTL 5.79e-01 0.0252 0.0453 0.282 gdT L2
ENSG00000118515 SGK1 -967022 sc-eQTL 3.56e-01 -0.079 0.0853 0.282 gdT L2
ENSG00000146409 SLC18B1 537751 sc-eQTL 8.67e-01 0.0197 0.117 0.282 gdT L2
ENSG00000028839 TBPL1 -601080 sc-eQTL 6.65e-01 0.0403 0.0929 0.291 intMono L2
ENSG00000079950 STX7 837892 sc-eQTL 9.47e-01 0.0059 0.0887 0.291 intMono L2
ENSG00000093134 VNN3 616325 sc-eQTL 8.13e-03 0.235 0.088 0.291 intMono L2
ENSG00000112299 VNN1 637035 sc-eQTL 2.72e-01 0.0973 0.0883 0.291 intMono L2
ENSG00000112303 VNN2 587631 sc-eQTL 2.61e-01 0.101 0.0897 0.291 intMono L2
ENSG00000112306 RPS12 536521 sc-eQTL 3.10e-01 -0.0397 0.0391 0.291 intMono L2
ENSG00000118515 SGK1 -967022 sc-eQTL 3.37e-01 -0.0632 0.0656 0.291 intMono L2
ENSG00000146409 SLC18B1 537751 sc-eQTL 1.02e-01 -0.156 0.0947 0.291 intMono L2
ENSG00000286887 AL355881.1 -945211 sc-eQTL 2.69e-01 -0.101 0.0909 0.291 intMono L2
ENSG00000028839 TBPL1 -601080 sc-eQTL 1.65e-01 0.132 0.0947 0.292 ncMono L2
ENSG00000079950 STX7 837892 sc-eQTL 3.37e-01 -0.0618 0.0642 0.292 ncMono L2
ENSG00000093134 VNN3 616325 sc-eQTL 8.85e-01 0.0131 0.0908 0.292 ncMono L2
ENSG00000112299 VNN1 637035 sc-eQTL 1.92e-01 -0.118 0.0898 0.292 ncMono L2
ENSG00000112303 VNN2 587631 sc-eQTL 2.53e-01 0.0991 0.0864 0.292 ncMono L2
ENSG00000112306 RPS12 536521 sc-eQTL 6.90e-01 -0.0174 0.0435 0.292 ncMono L2
ENSG00000118515 SGK1 -967022 sc-eQTL 2.45e-01 -0.0715 0.0613 0.292 ncMono L2
ENSG00000146409 SLC18B1 537751 sc-eQTL 3.62e-01 -0.07 0.0767 0.292 ncMono L2
ENSG00000286887 AL355881.1 -945211 sc-eQTL 8.61e-01 -0.0143 0.0812 0.292 ncMono L2
ENSG00000028839 TBPL1 -601080 sc-eQTL 8.77e-01 -0.0175 0.113 0.282 pDC L2
ENSG00000079950 STX7 837892 sc-eQTL 4.93e-01 0.0517 0.0753 0.282 pDC L2
ENSG00000093134 VNN3 616325 sc-eQTL 4.14e-01 0.0621 0.0758 0.282 pDC L2
ENSG00000112299 VNN1 637035 sc-eQTL 5.15e-01 0.0504 0.0772 0.282 pDC L2
ENSG00000112303 VNN2 587631 sc-eQTL 3.49e-02 0.193 0.0907 0.282 pDC L2
ENSG00000112306 RPS12 536521 sc-eQTL 1.25e-01 -0.097 0.0629 0.282 pDC L2
ENSG00000118515 SGK1 -967022 sc-eQTL 5.55e-01 -0.0381 0.0643 0.282 pDC L2
ENSG00000146409 SLC18B1 537751 sc-eQTL 1.56e-01 -0.133 0.0932 0.282 pDC L2
ENSG00000286438 AL591115.1 247962 sc-eQTL 8.32e-01 0.019 0.0898 0.282 pDC L2
ENSG00000286887 AL355881.1 -945211 sc-eQTL 5.48e-01 -0.0478 0.0795 0.282 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -601080 sc-eQTL 4.33e-01 0.0764 0.0971 0.297 B_Memory LOneK1K
ENSG00000079931 MOXD1 949615 sc-eQTL 5.77e-02 0.179 0.0937 0.297 B_Memory LOneK1K
ENSG00000079950 STX7 837892 sc-eQTL 5.49e-03 0.148 0.0526 0.297 B_Memory LOneK1K
ENSG00000112303 VNN2 587631 sc-eQTL 4.71e-02 0.168 0.0839 0.297 B_Memory LOneK1K
ENSG00000112306 RPS12 536521 sc-eQTL 4.78e-01 0.0343 0.0482 0.297 B_Memory LOneK1K
ENSG00000118515 SGK1 -967022 sc-eQTL 9.05e-01 -0.00904 0.0754 0.297 B_Memory LOneK1K
ENSG00000146409 SLC18B1 537751 sc-eQTL 4.34e-01 -0.0694 0.0884 0.297 B_Memory LOneK1K
ENSG00000028839 TBPL1 -601080 sc-eQTL 8.34e-01 -0.0192 0.0914 0.297 B_Naive LOneK1K
ENSG00000079931 MOXD1 949615 sc-eQTL 6.90e-02 0.182 0.0995 0.297 B_Naive LOneK1K
ENSG00000079950 STX7 837892 sc-eQTL 6.26e-01 0.0201 0.0411 0.297 B_Naive LOneK1K
ENSG00000112303 VNN2 587631 sc-eQTL 7.63e-01 -0.0242 0.0799 0.297 B_Naive LOneK1K
ENSG00000112306 RPS12 536521 sc-eQTL 7.85e-02 0.0849 0.048 0.297 B_Naive LOneK1K
ENSG00000118515 SGK1 -967022 sc-eQTL 5.78e-01 -0.0417 0.0748 0.297 B_Naive LOneK1K
ENSG00000146409 SLC18B1 537751 sc-eQTL 2.94e-01 0.0956 0.091 0.297 B_Naive LOneK1K
ENSG00000028839 TBPL1 -601080 sc-eQTL 7.43e-01 0.0243 0.0741 0.297 CD14_Mono LOneK1K
ENSG00000079950 STX7 837892 sc-eQTL 7.24e-01 0.0182 0.0515 0.297 CD14_Mono LOneK1K
ENSG00000093134 VNN3 616325 sc-eQTL 1.18e-01 0.131 0.0835 0.297 CD14_Mono LOneK1K
ENSG00000112299 VNN1 637035 sc-eQTL 8.93e-01 -0.0118 0.0876 0.297 CD14_Mono LOneK1K
ENSG00000112303 VNN2 587631 sc-eQTL 5.31e-01 -0.0363 0.0579 0.297 CD14_Mono LOneK1K
ENSG00000112306 RPS12 536521 sc-eQTL 2.64e-01 -0.0444 0.0396 0.297 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -967022 sc-eQTL 2.19e-01 -0.0665 0.0539 0.297 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 537751 sc-eQTL 5.32e-01 -0.0442 0.0706 0.297 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -945211 sc-eQTL 2.48e-02 -0.166 0.0732 0.297 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -601080 sc-eQTL 2.36e-01 0.11 0.0929 0.297 CD16_Mono LOneK1K
ENSG00000079950 STX7 837892 sc-eQTL 5.92e-01 -0.033 0.0615 0.297 CD16_Mono LOneK1K
ENSG00000093134 VNN3 616325 sc-eQTL 1.98e-01 0.116 0.0901 0.297 CD16_Mono LOneK1K
ENSG00000112299 VNN1 637035 sc-eQTL 3.65e-01 -0.0813 0.0895 0.297 CD16_Mono LOneK1K
ENSG00000112303 VNN2 587631 sc-eQTL 1.66e-01 0.117 0.0842 0.297 CD16_Mono LOneK1K
ENSG00000112306 RPS12 536521 sc-eQTL 8.86e-01 0.00516 0.0359 0.297 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -967022 sc-eQTL 2.39e-01 -0.0639 0.0541 0.297 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 537751 sc-eQTL 2.45e-01 -0.101 0.0868 0.297 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -945211 sc-eQTL 3.99e-01 -0.0664 0.0786 0.297 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -601080 sc-eQTL 9.55e-01 -0.00438 0.0778 0.3 NK_CD56dim LOneK1K
ENSG00000079950 STX7 837892 sc-eQTL 1.81e-01 0.0977 0.0728 0.3 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 587631 sc-eQTL 2.68e-01 0.102 0.0922 0.3 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 536521 sc-eQTL 5.78e-01 -0.021 0.0377 0.3 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -967022 sc-eQTL 2.60e-01 -0.0878 0.0777 0.3 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000146409 SLC18B1 537751 eQTL 0.0293 0.052 0.0238 0.0 0.0 0.288

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000118515 \N -967022 5.59e-07 1.07e-06 8.67e-08 9.74e-07 1.07e-07 1.85e-07 7.25e-07 5.85e-08 1.1e-06 2.12e-07 1.67e-06 5.68e-07 1.59e-06 2.55e-07 1.26e-07 2.83e-07 2.77e-07 3.73e-07 9.19e-08 4.89e-08 1.6e-07 5.37e-07 3.19e-07 3.49e-08 1.02e-06 2.01e-07 1.74e-07 1.1e-07 2.03e-07 2e-07 5.37e-07 3.76e-08 3.28e-08 1.39e-07 3.67e-07 3.94e-08 5.29e-08 9.23e-08 4.9e-08 5.88e-08 4.6e-08 1.22e-06 4.17e-08 1.32e-07 5.19e-08 1.75e-08 1.21e-07 4.14e-09 4.77e-08