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Genes within 1Mb (chr6:133344116:AT:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -608054 sc-eQTL 8.47e-01 0.0175 0.0908 0.301 B L1
ENSG00000079931 MOXD1 942641 sc-eQTL 2.14e-02 0.219 0.0947 0.301 B L1
ENSG00000079950 STX7 830918 sc-eQTL 4.67e-01 0.0263 0.0361 0.301 B L1
ENSG00000112303 VNN2 580657 sc-eQTL 9.29e-01 0.00607 0.068 0.301 B L1
ENSG00000112306 RPS12 529547 sc-eQTL 1.27e-01 0.0626 0.0409 0.301 B L1
ENSG00000118515 SGK1 -973996 sc-eQTL 1.61e-01 -0.0888 0.0631 0.301 B L1
ENSG00000146409 SLC18B1 530777 sc-eQTL 3.44e-01 0.0818 0.0864 0.301 B L1
ENSG00000028839 TBPL1 -608054 sc-eQTL 3.08e-01 0.0682 0.0667 0.301 CD4T L1
ENSG00000079950 STX7 830918 sc-eQTL 4.97e-01 0.0473 0.0694 0.301 CD4T L1
ENSG00000112303 VNN2 580657 sc-eQTL 3.31e-01 0.0585 0.0601 0.301 CD4T L1
ENSG00000112306 RPS12 529547 sc-eQTL 4.28e-01 0.0324 0.0409 0.301 CD4T L1
ENSG00000118515 SGK1 -973996 sc-eQTL 7.04e-01 -0.021 0.055 0.301 CD4T L1
ENSG00000146409 SLC18B1 530777 sc-eQTL 7.76e-01 0.0236 0.0828 0.301 CD4T L1
ENSG00000028839 TBPL1 -608054 sc-eQTL 1.39e-01 0.0978 0.0658 0.301 CD8T L1
ENSG00000079950 STX7 830918 sc-eQTL 2.21e-01 0.0845 0.0688 0.301 CD8T L1
ENSG00000112303 VNN2 580657 sc-eQTL 9.28e-01 0.00734 0.0806 0.301 CD8T L1
ENSG00000112306 RPS12 529547 sc-eQTL 5.12e-01 0.0181 0.0275 0.301 CD8T L1
ENSG00000118515 SGK1 -973996 sc-eQTL 4.77e-01 -0.0302 0.0424 0.301 CD8T L1
ENSG00000146409 SLC18B1 530777 sc-eQTL 8.78e-01 -0.0128 0.0833 0.301 CD8T L1
ENSG00000028839 TBPL1 -608054 sc-eQTL 3.01e-01 0.103 0.0993 0.297 DC L1
ENSG00000079950 STX7 830918 sc-eQTL 5.67e-01 0.0355 0.0618 0.297 DC L1
ENSG00000093134 VNN3 609351 sc-eQTL 5.59e-01 0.0449 0.0767 0.297 DC L1
ENSG00000112299 VNN1 630061 sc-eQTL 9.58e-01 -0.00441 0.0828 0.297 DC L1
ENSG00000112303 VNN2 580657 sc-eQTL 4.27e-02 0.179 0.0877 0.297 DC L1
ENSG00000112306 RPS12 529547 sc-eQTL 6.92e-01 0.0197 0.0497 0.297 DC L1
ENSG00000118515 SGK1 -973996 sc-eQTL 4.15e-01 -0.047 0.0576 0.297 DC L1
ENSG00000146409 SLC18B1 530777 sc-eQTL 3.42e-01 -0.0748 0.0784 0.297 DC L1
ENSG00000286438 AL591115.1 240988 sc-eQTL 8.91e-01 0.00985 0.0716 0.297 DC L1
ENSG00000286887 AL355881.1 -952185 sc-eQTL 4.00e-01 -0.075 0.089 0.297 DC L1
ENSG00000028839 TBPL1 -608054 sc-eQTL 4.51e-01 0.0529 0.07 0.301 Mono L1
ENSG00000079950 STX7 830918 sc-eQTL 7.01e-01 0.018 0.0469 0.301 Mono L1
ENSG00000093134 VNN3 609351 sc-eQTL 7.87e-02 0.141 0.0799 0.301 Mono L1
ENSG00000112299 VNN1 630061 sc-eQTL 7.26e-01 -0.0304 0.0866 0.301 Mono L1
ENSG00000112303 VNN2 580657 sc-eQTL 5.60e-01 -0.0357 0.0611 0.301 Mono L1
ENSG00000112306 RPS12 529547 sc-eQTL 4.99e-01 -0.0248 0.0366 0.301 Mono L1
ENSG00000118515 SGK1 -973996 sc-eQTL 3.33e-01 -0.0501 0.0516 0.301 Mono L1
ENSG00000146409 SLC18B1 530777 sc-eQTL 6.98e-01 -0.0282 0.0725 0.301 Mono L1
ENSG00000286887 AL355881.1 -952185 sc-eQTL 2.73e-02 -0.157 0.0704 0.301 Mono L1
ENSG00000028839 TBPL1 -608054 sc-eQTL 9.94e-01 0.0006 0.0783 0.303 NK L1
ENSG00000079950 STX7 830918 sc-eQTL 1.95e-01 0.0937 0.0721 0.303 NK L1
ENSG00000112303 VNN2 580657 sc-eQTL 4.30e-01 0.0711 0.0899 0.303 NK L1
ENSG00000112306 RPS12 529547 sc-eQTL 7.12e-01 -0.0138 0.0373 0.303 NK L1
ENSG00000118515 SGK1 -973996 sc-eQTL 5.42e-01 -0.042 0.0689 0.303 NK L1
ENSG00000028839 TBPL1 -608054 sc-eQTL 1.17e-01 -0.142 0.0906 0.301 Other_T L1
ENSG00000079950 STX7 830918 sc-eQTL 9.32e-01 0.00613 0.0717 0.301 Other_T L1
ENSG00000112303 VNN2 580657 sc-eQTL 7.50e-01 -0.0276 0.0867 0.301 Other_T L1
ENSG00000112306 RPS12 529547 sc-eQTL 8.07e-01 -0.00842 0.0344 0.301 Other_T L1
ENSG00000118515 SGK1 -973996 sc-eQTL 5.46e-02 -0.121 0.0627 0.301 Other_T L1
ENSG00000146409 SLC18B1 530777 sc-eQTL 3.06e-01 0.0964 0.0939 0.301 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -608054 sc-eQTL 3.86e-01 0.0918 0.106 0.298 B_Activated L2
ENSG00000079931 MOXD1 942641 sc-eQTL 5.69e-01 0.0552 0.0967 0.298 B_Activated L2
ENSG00000079950 STX7 830918 sc-eQTL 9.00e-01 0.0115 0.0907 0.298 B_Activated L2
ENSG00000112303 VNN2 580657 sc-eQTL 5.67e-01 0.0553 0.0965 0.298 B_Activated L2
ENSG00000112306 RPS12 529547 sc-eQTL 7.39e-01 0.0172 0.0517 0.298 B_Activated L2
ENSG00000118515 SGK1 -973996 sc-eQTL 3.80e-01 -0.0811 0.0921 0.298 B_Activated L2
ENSG00000146409 SLC18B1 530777 sc-eQTL 4.88e-01 0.0629 0.0905 0.298 B_Activated L2
ENSG00000028839 TBPL1 -608054 sc-eQTL 6.65e-02 0.185 0.1 0.298 B_Intermediate L2
ENSG00000079931 MOXD1 942641 sc-eQTL 2.51e-04 0.32 0.086 0.298 B_Intermediate L2
ENSG00000079950 STX7 830918 sc-eQTL 1.53e-01 0.083 0.0578 0.298 B_Intermediate L2
ENSG00000112303 VNN2 580657 sc-eQTL 3.99e-01 0.0739 0.0874 0.298 B_Intermediate L2
ENSG00000112306 RPS12 529547 sc-eQTL 1.18e-01 0.0836 0.0533 0.298 B_Intermediate L2
ENSG00000118515 SGK1 -973996 sc-eQTL 8.47e-01 -0.0179 0.0926 0.298 B_Intermediate L2
ENSG00000146409 SLC18B1 530777 sc-eQTL 5.00e-01 -0.0652 0.0964 0.298 B_Intermediate L2
ENSG00000028839 TBPL1 -608054 sc-eQTL 2.48e-02 -0.214 0.0946 0.302 B_Memory L2
ENSG00000079931 MOXD1 942641 sc-eQTL 7.36e-01 -0.0298 0.0883 0.302 B_Memory L2
ENSG00000079950 STX7 830918 sc-eQTL 1.19e-02 0.173 0.0683 0.302 B_Memory L2
ENSG00000112303 VNN2 580657 sc-eQTL 1.50e-01 0.13 0.0902 0.302 B_Memory L2
ENSG00000112306 RPS12 529547 sc-eQTL 2.09e-01 0.0548 0.0435 0.302 B_Memory L2
ENSG00000118515 SGK1 -973996 sc-eQTL 4.79e-01 0.0567 0.08 0.302 B_Memory L2
ENSG00000146409 SLC18B1 530777 sc-eQTL 6.32e-01 0.0437 0.0911 0.302 B_Memory L2
ENSG00000028839 TBPL1 -608054 sc-eQTL 8.53e-01 0.0167 0.0904 0.301 B_Naive1 L2
ENSG00000079931 MOXD1 942641 sc-eQTL 1.76e-02 0.235 0.098 0.301 B_Naive1 L2
ENSG00000079950 STX7 830918 sc-eQTL 8.49e-01 -0.0083 0.0434 0.301 B_Naive1 L2
ENSG00000112303 VNN2 580657 sc-eQTL 7.54e-01 -0.0264 0.0843 0.301 B_Naive1 L2
ENSG00000112306 RPS12 529547 sc-eQTL 3.72e-01 0.0429 0.0479 0.301 B_Naive1 L2
ENSG00000118515 SGK1 -973996 sc-eQTL 9.78e-01 0.00209 0.0751 0.301 B_Naive1 L2
ENSG00000146409 SLC18B1 530777 sc-eQTL 5.78e-01 0.0516 0.0926 0.301 B_Naive1 L2
ENSG00000028839 TBPL1 -608054 sc-eQTL 9.77e-01 -0.00277 0.0972 0.303 B_Naive2 L2
ENSG00000079931 MOXD1 942641 sc-eQTL 7.86e-01 -0.0258 0.0948 0.303 B_Naive2 L2
ENSG00000079950 STX7 830918 sc-eQTL 8.23e-01 0.0115 0.0516 0.303 B_Naive2 L2
ENSG00000112303 VNN2 580657 sc-eQTL 9.15e-01 0.0101 0.0948 0.303 B_Naive2 L2
ENSG00000112306 RPS12 529547 sc-eQTL 1.83e-02 0.118 0.0495 0.303 B_Naive2 L2
ENSG00000118515 SGK1 -973996 sc-eQTL 4.23e-01 -0.071 0.0885 0.303 B_Naive2 L2
ENSG00000146409 SLC18B1 530777 sc-eQTL 1.99e-01 0.123 0.0954 0.303 B_Naive2 L2
ENSG00000028839 TBPL1 -608054 sc-eQTL 8.97e-01 0.0125 0.0961 0.3 CD4_CTL L2
ENSG00000079950 STX7 830918 sc-eQTL 9.21e-01 -0.00947 0.0954 0.3 CD4_CTL L2
ENSG00000112303 VNN2 580657 sc-eQTL 2.14e-02 0.22 0.095 0.3 CD4_CTL L2
ENSG00000112306 RPS12 529547 sc-eQTL 1.29e-01 0.0674 0.0442 0.3 CD4_CTL L2
ENSG00000118515 SGK1 -973996 sc-eQTL 9.84e-01 -0.00153 0.0771 0.3 CD4_CTL L2
ENSG00000146409 SLC18B1 530777 sc-eQTL 5.68e-01 0.0512 0.0896 0.3 CD4_CTL L2
ENSG00000028839 TBPL1 -608054 sc-eQTL 2.61e-01 -0.0858 0.0761 0.301 CD4_Naive L2
ENSG00000079950 STX7 830918 sc-eQTL 4.85e-01 -0.0523 0.0747 0.301 CD4_Naive L2
ENSG00000112303 VNN2 580657 sc-eQTL 6.52e-01 0.0313 0.0693 0.301 CD4_Naive L2
ENSG00000112306 RPS12 529547 sc-eQTL 3.55e-01 0.0416 0.0449 0.301 CD4_Naive L2
ENSG00000118515 SGK1 -973996 sc-eQTL 5.41e-01 -0.0337 0.055 0.301 CD4_Naive L2
ENSG00000146409 SLC18B1 530777 sc-eQTL 9.35e-01 -0.00703 0.0865 0.301 CD4_Naive L2
ENSG00000028839 TBPL1 -608054 sc-eQTL 9.38e-03 0.215 0.0818 0.301 CD4_TCM L2
ENSG00000079950 STX7 830918 sc-eQTL 6.94e-02 0.152 0.0831 0.301 CD4_TCM L2
ENSG00000112303 VNN2 580657 sc-eQTL 8.03e-01 0.0206 0.0825 0.301 CD4_TCM L2
ENSG00000112306 RPS12 529547 sc-eQTL 7.84e-01 0.0117 0.0428 0.301 CD4_TCM L2
ENSG00000118515 SGK1 -973996 sc-eQTL 5.79e-01 -0.0333 0.0598 0.301 CD4_TCM L2
ENSG00000146409 SLC18B1 530777 sc-eQTL 2.95e-01 0.104 0.0988 0.301 CD4_TCM L2
ENSG00000028839 TBPL1 -608054 sc-eQTL 2.59e-01 0.11 0.0969 0.301 CD4_TEM L2
ENSG00000079950 STX7 830918 sc-eQTL 2.25e-01 -0.118 0.097 0.301 CD4_TEM L2
ENSG00000112303 VNN2 580657 sc-eQTL 7.84e-02 0.164 0.0927 0.301 CD4_TEM L2
ENSG00000112306 RPS12 529547 sc-eQTL 8.44e-01 0.00753 0.0383 0.301 CD4_TEM L2
ENSG00000118515 SGK1 -973996 sc-eQTL 5.87e-01 -0.0357 0.0658 0.301 CD4_TEM L2
ENSG00000146409 SLC18B1 530777 sc-eQTL 5.25e-02 0.184 0.0944 0.301 CD4_TEM L2
ENSG00000028839 TBPL1 -608054 sc-eQTL 5.84e-01 0.0462 0.0843 0.301 CD8_CTL L2
ENSG00000079950 STX7 830918 sc-eQTL 2.13e-01 0.0981 0.0785 0.301 CD8_CTL L2
ENSG00000112303 VNN2 580657 sc-eQTL 8.17e-01 -0.0207 0.0895 0.301 CD8_CTL L2
ENSG00000112306 RPS12 529547 sc-eQTL 9.29e-01 0.00426 0.0479 0.301 CD8_CTL L2
ENSG00000118515 SGK1 -973996 sc-eQTL 3.57e-01 -0.0745 0.0808 0.301 CD8_CTL L2
ENSG00000146409 SLC18B1 530777 sc-eQTL 9.64e-01 -0.00417 0.0929 0.301 CD8_CTL L2
ENSG00000028839 TBPL1 -608054 sc-eQTL 5.43e-01 0.0542 0.0889 0.301 CD8_Naive L2
ENSG00000079950 STX7 830918 sc-eQTL 1.50e-01 0.136 0.0944 0.301 CD8_Naive L2
ENSG00000112303 VNN2 580657 sc-eQTL 5.26e-01 -0.052 0.0818 0.301 CD8_Naive L2
ENSG00000112306 RPS12 529547 sc-eQTL 6.63e-01 -0.0204 0.0468 0.301 CD8_Naive L2
ENSG00000118515 SGK1 -973996 sc-eQTL 1.55e-01 -0.0836 0.0585 0.301 CD8_Naive L2
ENSG00000146409 SLC18B1 530777 sc-eQTL 4.89e-01 0.0651 0.0939 0.301 CD8_Naive L2
ENSG00000028839 TBPL1 -608054 sc-eQTL 2.39e-01 -0.119 0.101 0.301 CD8_TCM L2
ENSG00000079950 STX7 830918 sc-eQTL 2.91e-01 0.0987 0.0933 0.301 CD8_TCM L2
ENSG00000112303 VNN2 580657 sc-eQTL 4.50e-01 -0.0702 0.0927 0.301 CD8_TCM L2
ENSG00000112306 RPS12 529547 sc-eQTL 2.28e-01 0.0545 0.0451 0.301 CD8_TCM L2
ENSG00000118515 SGK1 -973996 sc-eQTL 1.74e-01 -0.102 0.0746 0.301 CD8_TCM L2
ENSG00000146409 SLC18B1 530777 sc-eQTL 7.35e-01 -0.0337 0.0991 0.301 CD8_TCM L2
ENSG00000028839 TBPL1 -608054 sc-eQTL 3.81e-01 -0.0812 0.0925 0.295 CD8_TEM L2
ENSG00000079950 STX7 830918 sc-eQTL 6.76e-02 -0.184 0.1 0.295 CD8_TEM L2
ENSG00000112303 VNN2 580657 sc-eQTL 8.56e-01 0.0183 0.101 0.295 CD8_TEM L2
ENSG00000112306 RPS12 529547 sc-eQTL 5.55e-01 0.032 0.0541 0.295 CD8_TEM L2
ENSG00000118515 SGK1 -973996 sc-eQTL 7.76e-01 -0.0252 0.0887 0.295 CD8_TEM L2
ENSG00000146409 SLC18B1 530777 sc-eQTL 3.19e-01 0.102 0.102 0.295 CD8_TEM L2
ENSG00000028839 TBPL1 -608054 sc-eQTL 1.92e-01 -0.125 0.0957 0.303 MAIT L2
ENSG00000079950 STX7 830918 sc-eQTL 9.53e-01 0.00536 0.0913 0.303 MAIT L2
ENSG00000112303 VNN2 580657 sc-eQTL 7.39e-01 -0.0309 0.0928 0.303 MAIT L2
ENSG00000112306 RPS12 529547 sc-eQTL 8.17e-01 -0.0106 0.0457 0.303 MAIT L2
ENSG00000118515 SGK1 -973996 sc-eQTL 3.23e-01 -0.0635 0.0641 0.303 MAIT L2
ENSG00000146409 SLC18B1 530777 sc-eQTL 7.01e-01 0.0368 0.0957 0.303 MAIT L2
ENSG00000028839 TBPL1 -608054 sc-eQTL 4.88e-01 0.0707 0.102 0.3 NK_CD56bright L2
ENSG00000079950 STX7 830918 sc-eQTL 6.32e-01 -0.0452 0.0943 0.3 NK_CD56bright L2
ENSG00000112303 VNN2 580657 sc-eQTL 9.00e-01 -0.0121 0.0958 0.3 NK_CD56bright L2
ENSG00000112306 RPS12 529547 sc-eQTL 7.06e-01 0.0202 0.0533 0.3 NK_CD56bright L2
ENSG00000118515 SGK1 -973996 sc-eQTL 8.97e-01 0.0104 0.0798 0.3 NK_CD56bright L2
ENSG00000028839 TBPL1 -608054 sc-eQTL 4.69e-01 -0.0609 0.0839 0.304 NK_CD56dim L2
ENSG00000079950 STX7 830918 sc-eQTL 5.26e-01 0.0488 0.0768 0.304 NK_CD56dim L2
ENSG00000112303 VNN2 580657 sc-eQTL 5.73e-01 0.0543 0.0961 0.304 NK_CD56dim L2
ENSG00000112306 RPS12 529547 sc-eQTL 8.64e-01 0.00657 0.0382 0.304 NK_CD56dim L2
ENSG00000118515 SGK1 -973996 sc-eQTL 8.20e-01 -0.0193 0.0846 0.304 NK_CD56dim L2
ENSG00000028839 TBPL1 -608054 sc-eQTL 7.03e-01 -0.0387 0.101 0.306 NK_HLA L2
ENSG00000079950 STX7 830918 sc-eQTL 4.96e-01 0.0628 0.0921 0.306 NK_HLA L2
ENSG00000112303 VNN2 580657 sc-eQTL 6.56e-01 -0.0416 0.0933 0.306 NK_HLA L2
ENSG00000112306 RPS12 529547 sc-eQTL 7.56e-01 0.0135 0.0435 0.306 NK_HLA L2
ENSG00000118515 SGK1 -973996 sc-eQTL 6.61e-01 0.0377 0.0859 0.306 NK_HLA L2
ENSG00000028839 TBPL1 -608054 sc-eQTL 6.03e-01 0.0447 0.0859 0.304 NK_cytokine L2
ENSG00000079950 STX7 830918 sc-eQTL 4.66e-01 0.0606 0.0831 0.304 NK_cytokine L2
ENSG00000112303 VNN2 580657 sc-eQTL 6.76e-01 0.0392 0.0935 0.304 NK_cytokine L2
ENSG00000112306 RPS12 529547 sc-eQTL 4.61e-01 0.0375 0.0507 0.304 NK_cytokine L2
ENSG00000118515 SGK1 -973996 sc-eQTL 1.29e-02 -0.209 0.0832 0.304 NK_cytokine L2
ENSG00000028839 TBPL1 -608054 sc-eQTL 4.65e-01 -0.0841 0.115 0.304 PB L2
ENSG00000079931 MOXD1 942641 sc-eQTL 6.84e-01 0.04 0.098 0.304 PB L2
ENSG00000079950 STX7 830918 sc-eQTL 5.69e-01 0.0467 0.0818 0.304 PB L2
ENSG00000112303 VNN2 580657 sc-eQTL 4.95e-01 0.0684 0.0998 0.304 PB L2
ENSG00000112306 RPS12 529547 sc-eQTL 4.18e-01 -0.0461 0.0566 0.304 PB L2
ENSG00000118515 SGK1 -973996 sc-eQTL 2.36e-01 -0.109 0.0912 0.304 PB L2
ENSG00000146409 SLC18B1 530777 sc-eQTL 9.11e-01 -0.0119 0.106 0.304 PB L2
ENSG00000028839 TBPL1 -608054 sc-eQTL 8.72e-01 0.0155 0.0959 0.302 Pro_T L2
ENSG00000079950 STX7 830918 sc-eQTL 1.81e-01 0.114 0.0852 0.302 Pro_T L2
ENSG00000112303 VNN2 580657 sc-eQTL 5.24e-01 -0.0586 0.0917 0.302 Pro_T L2
ENSG00000112306 RPS12 529547 sc-eQTL 6.92e-01 -0.0138 0.0347 0.302 Pro_T L2
ENSG00000118515 SGK1 -973996 sc-eQTL 3.16e-01 -0.0698 0.0695 0.302 Pro_T L2
ENSG00000146409 SLC18B1 530777 sc-eQTL 1.48e-01 0.13 0.0895 0.302 Pro_T L2
ENSG00000028839 TBPL1 -608054 sc-eQTL 7.51e-01 -0.0308 0.097 0.301 Treg L2
ENSG00000079950 STX7 830918 sc-eQTL 7.40e-01 0.0304 0.0914 0.301 Treg L2
ENSG00000112303 VNN2 580657 sc-eQTL 7.25e-01 -0.0271 0.0769 0.301 Treg L2
ENSG00000112306 RPS12 529547 sc-eQTL 9.46e-01 -0.00232 0.034 0.301 Treg L2
ENSG00000118515 SGK1 -973996 sc-eQTL 5.65e-01 0.0413 0.0717 0.301 Treg L2
ENSG00000146409 SLC18B1 530777 sc-eQTL 6.31e-01 0.0462 0.0961 0.301 Treg L2
ENSG00000028839 TBPL1 -608054 sc-eQTL 5.99e-01 0.0538 0.102 0.288 cDC L2
ENSG00000079950 STX7 830918 sc-eQTL 7.49e-01 -0.0258 0.0803 0.288 cDC L2
ENSG00000093134 VNN3 609351 sc-eQTL 2.50e-01 0.0918 0.0795 0.288 cDC L2
ENSG00000112299 VNN1 630061 sc-eQTL 5.29e-01 0.0591 0.0937 0.288 cDC L2
ENSG00000112303 VNN2 580657 sc-eQTL 2.57e-01 0.103 0.0911 0.288 cDC L2
ENSG00000112306 RPS12 529547 sc-eQTL 8.52e-01 0.00843 0.0451 0.288 cDC L2
ENSG00000118515 SGK1 -973996 sc-eQTL 1.11e-01 -0.121 0.0755 0.288 cDC L2
ENSG00000146409 SLC18B1 530777 sc-eQTL 6.62e-01 0.0392 0.0893 0.288 cDC L2
ENSG00000286438 AL591115.1 240988 sc-eQTL 6.01e-01 0.0374 0.0714 0.288 cDC L2
ENSG00000286887 AL355881.1 -952185 sc-eQTL 2.49e-01 -0.101 0.0876 0.288 cDC L2
ENSG00000028839 TBPL1 -608054 sc-eQTL 7.88e-01 0.0218 0.0809 0.301 cMono_IL1B L2
ENSG00000079950 STX7 830918 sc-eQTL 5.66e-01 0.0353 0.0614 0.301 cMono_IL1B L2
ENSG00000093134 VNN3 609351 sc-eQTL 1.34e-01 0.13 0.0863 0.301 cMono_IL1B L2
ENSG00000112299 VNN1 630061 sc-eQTL 7.04e-01 -0.0334 0.0875 0.301 cMono_IL1B L2
ENSG00000112303 VNN2 580657 sc-eQTL 8.59e-01 0.0125 0.07 0.301 cMono_IL1B L2
ENSG00000112306 RPS12 529547 sc-eQTL 4.57e-01 -0.029 0.0388 0.301 cMono_IL1B L2
ENSG00000118515 SGK1 -973996 sc-eQTL 1.86e-01 -0.0766 0.0578 0.301 cMono_IL1B L2
ENSG00000146409 SLC18B1 530777 sc-eQTL 3.80e-01 -0.0659 0.0749 0.301 cMono_IL1B L2
ENSG00000286887 AL355881.1 -952185 sc-eQTL 3.04e-02 -0.168 0.0773 0.301 cMono_IL1B L2
ENSG00000028839 TBPL1 -608054 sc-eQTL 6.47e-01 0.0418 0.0912 0.301 cMono_S100A L2
ENSG00000079950 STX7 830918 sc-eQTL 9.99e-01 -5.99e-05 0.0659 0.301 cMono_S100A L2
ENSG00000093134 VNN3 609351 sc-eQTL 4.63e-02 0.163 0.0815 0.301 cMono_S100A L2
ENSG00000112299 VNN1 630061 sc-eQTL 4.71e-01 0.0644 0.0892 0.301 cMono_S100A L2
ENSG00000112303 VNN2 580657 sc-eQTL 7.91e-01 -0.0156 0.0585 0.301 cMono_S100A L2
ENSG00000112306 RPS12 529547 sc-eQTL 4.33e-01 -0.033 0.0421 0.301 cMono_S100A L2
ENSG00000118515 SGK1 -973996 sc-eQTL 1.96e-01 -0.0623 0.048 0.301 cMono_S100A L2
ENSG00000146409 SLC18B1 530777 sc-eQTL 6.87e-01 -0.0314 0.078 0.301 cMono_S100A L2
ENSG00000286887 AL355881.1 -952185 sc-eQTL 8.74e-03 -0.199 0.075 0.301 cMono_S100A L2
ENSG00000028839 TBPL1 -608054 sc-eQTL 2.41e-01 -0.145 0.123 0.288 gdT L2
ENSG00000079950 STX7 830918 sc-eQTL 6.47e-01 0.0489 0.106 0.288 gdT L2
ENSG00000112303 VNN2 580657 sc-eQTL 2.54e-01 -0.134 0.117 0.288 gdT L2
ENSG00000112306 RPS12 529547 sc-eQTL 7.32e-01 0.0154 0.0448 0.288 gdT L2
ENSG00000118515 SGK1 -973996 sc-eQTL 3.44e-01 -0.0802 0.0844 0.288 gdT L2
ENSG00000146409 SLC18B1 530777 sc-eQTL 9.49e-01 -0.00747 0.116 0.288 gdT L2
ENSG00000028839 TBPL1 -608054 sc-eQTL 5.43e-01 0.0562 0.0922 0.296 intMono L2
ENSG00000079950 STX7 830918 sc-eQTL 8.67e-01 0.0148 0.0881 0.296 intMono L2
ENSG00000093134 VNN3 609351 sc-eQTL 3.81e-03 0.255 0.0872 0.296 intMono L2
ENSG00000112299 VNN1 630061 sc-eQTL 2.42e-01 0.103 0.0877 0.296 intMono L2
ENSG00000112303 VNN2 580657 sc-eQTL 3.18e-01 0.0894 0.0892 0.296 intMono L2
ENSG00000112306 RPS12 529547 sc-eQTL 2.30e-01 -0.0467 0.0388 0.296 intMono L2
ENSG00000118515 SGK1 -973996 sc-eQTL 3.66e-01 -0.0591 0.0652 0.296 intMono L2
ENSG00000146409 SLC18B1 530777 sc-eQTL 6.94e-02 -0.171 0.094 0.296 intMono L2
ENSG00000286887 AL355881.1 -952185 sc-eQTL 2.20e-01 -0.111 0.0903 0.296 intMono L2
ENSG00000028839 TBPL1 -608054 sc-eQTL 1.90e-01 0.123 0.0939 0.296 ncMono L2
ENSG00000079950 STX7 830918 sc-eQTL 3.80e-01 -0.056 0.0636 0.296 ncMono L2
ENSG00000093134 VNN3 609351 sc-eQTL 8.40e-01 0.0182 0.09 0.296 ncMono L2
ENSG00000112299 VNN1 630061 sc-eQTL 1.92e-01 -0.116 0.0889 0.296 ncMono L2
ENSG00000112303 VNN2 580657 sc-eQTL 2.03e-01 0.109 0.0855 0.296 ncMono L2
ENSG00000112306 RPS12 529547 sc-eQTL 7.72e-01 -0.0125 0.0431 0.296 ncMono L2
ENSG00000118515 SGK1 -973996 sc-eQTL 1.48e-01 -0.0881 0.0606 0.296 ncMono L2
ENSG00000146409 SLC18B1 530777 sc-eQTL 3.90e-01 -0.0654 0.0759 0.296 ncMono L2
ENSG00000286887 AL355881.1 -952185 sc-eQTL 8.27e-01 -0.0176 0.0804 0.296 ncMono L2
ENSG00000028839 TBPL1 -608054 sc-eQTL 9.17e-01 -0.0116 0.112 0.285 pDC L2
ENSG00000079950 STX7 830918 sc-eQTL 5.63e-01 0.0432 0.0744 0.285 pDC L2
ENSG00000093134 VNN3 609351 sc-eQTL 4.90e-01 0.0518 0.0748 0.285 pDC L2
ENSG00000112299 VNN1 630061 sc-eQTL 5.82e-01 0.042 0.0762 0.285 pDC L2
ENSG00000112303 VNN2 580657 sc-eQTL 2.41e-02 0.203 0.0893 0.285 pDC L2
ENSG00000112306 RPS12 529547 sc-eQTL 1.12e-01 -0.0992 0.062 0.285 pDC L2
ENSG00000118515 SGK1 -973996 sc-eQTL 6.02e-01 -0.0332 0.0635 0.285 pDC L2
ENSG00000146409 SLC18B1 530777 sc-eQTL 1.69e-01 -0.127 0.092 0.285 pDC L2
ENSG00000286438 AL591115.1 240988 sc-eQTL 9.71e-01 0.00322 0.0886 0.285 pDC L2
ENSG00000286887 AL355881.1 -952185 sc-eQTL 7.47e-01 -0.0253 0.0786 0.285 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -608054 sc-eQTL 3.47e-01 0.0911 0.0967 0.301 B_Memory LOneK1K
ENSG00000079931 MOXD1 942641 sc-eQTL 7.33e-02 0.168 0.0934 0.301 B_Memory LOneK1K
ENSG00000079950 STX7 830918 sc-eQTL 9.24e-03 0.138 0.0525 0.301 B_Memory LOneK1K
ENSG00000112303 VNN2 580657 sc-eQTL 6.71e-02 0.154 0.0837 0.301 B_Memory LOneK1K
ENSG00000112306 RPS12 529547 sc-eQTL 4.23e-01 0.0385 0.048 0.301 B_Memory LOneK1K
ENSG00000118515 SGK1 -973996 sc-eQTL 7.32e-01 -0.0258 0.0751 0.301 B_Memory LOneK1K
ENSG00000146409 SLC18B1 530777 sc-eQTL 3.88e-01 -0.0761 0.0881 0.301 B_Memory LOneK1K
ENSG00000028839 TBPL1 -608054 sc-eQTL 7.83e-01 -0.0251 0.0909 0.301 B_Naive LOneK1K
ENSG00000079931 MOXD1 942641 sc-eQTL 7.69e-02 0.176 0.099 0.301 B_Naive LOneK1K
ENSG00000079950 STX7 830918 sc-eQTL 8.28e-01 0.00893 0.0409 0.301 B_Naive LOneK1K
ENSG00000112303 VNN2 580657 sc-eQTL 7.74e-01 -0.0229 0.0795 0.301 B_Naive LOneK1K
ENSG00000112306 RPS12 529547 sc-eQTL 6.34e-02 0.089 0.0477 0.301 B_Naive LOneK1K
ENSG00000118515 SGK1 -973996 sc-eQTL 4.88e-01 -0.0517 0.0744 0.301 B_Naive LOneK1K
ENSG00000146409 SLC18B1 530777 sc-eQTL 3.88e-01 0.0783 0.0906 0.301 B_Naive LOneK1K
ENSG00000028839 TBPL1 -608054 sc-eQTL 7.32e-01 0.0253 0.0737 0.301 CD14_Mono LOneK1K
ENSG00000079950 STX7 830918 sc-eQTL 7.12e-01 0.019 0.0512 0.301 CD14_Mono LOneK1K
ENSG00000093134 VNN3 609351 sc-eQTL 1.14e-01 0.132 0.083 0.301 CD14_Mono LOneK1K
ENSG00000112299 VNN1 630061 sc-eQTL 9.93e-01 -0.000734 0.0871 0.301 CD14_Mono LOneK1K
ENSG00000112303 VNN2 580657 sc-eQTL 5.15e-01 -0.0375 0.0575 0.301 CD14_Mono LOneK1K
ENSG00000112306 RPS12 529547 sc-eQTL 3.85e-01 -0.0343 0.0394 0.301 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -973996 sc-eQTL 1.93e-01 -0.0701 0.0536 0.301 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 530777 sc-eQTL 4.20e-01 -0.0567 0.0702 0.301 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -952185 sc-eQTL 1.03e-02 -0.188 0.0726 0.301 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -608054 sc-eQTL 1.80e-01 0.124 0.0922 0.302 CD16_Mono LOneK1K
ENSG00000079950 STX7 830918 sc-eQTL 6.74e-01 -0.0257 0.0611 0.302 CD16_Mono LOneK1K
ENSG00000093134 VNN3 609351 sc-eQTL 1.67e-01 0.124 0.0894 0.302 CD16_Mono LOneK1K
ENSG00000112299 VNN1 630061 sc-eQTL 3.64e-01 -0.0809 0.0889 0.302 CD16_Mono LOneK1K
ENSG00000112303 VNN2 580657 sc-eQTL 1.68e-01 0.116 0.0836 0.302 CD16_Mono LOneK1K
ENSG00000112306 RPS12 529547 sc-eQTL 8.64e-01 0.0061 0.0356 0.302 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -973996 sc-eQTL 2.41e-01 -0.0631 0.0537 0.302 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 530777 sc-eQTL 2.17e-01 -0.107 0.0862 0.302 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -952185 sc-eQTL 3.73e-01 -0.0696 0.078 0.302 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -608054 sc-eQTL 9.31e-01 0.00669 0.0773 0.304 NK_CD56dim LOneK1K
ENSG00000079950 STX7 830918 sc-eQTL 2.10e-01 0.0909 0.0724 0.304 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 580657 sc-eQTL 3.59e-01 0.0844 0.0918 0.304 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 529547 sc-eQTL 6.73e-01 -0.0158 0.0375 0.304 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -973996 sc-eQTL 2.55e-01 -0.0882 0.0773 0.304 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000146409 SLC18B1 530777 eQTL 0.021 0.0554 0.0239 0.0 0.0 0.288

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000112299 \N 630061 1.25e-06 9.34e-07 3.3e-07 1.01e-06 3.4e-07 6.02e-07 1.48e-06 7.46e-08 1.14e-06 3.24e-07 1.37e-06 4.31e-07 2.63e-06 2.81e-07 3.61e-07 7.95e-07 7.74e-07 5.8e-07 4e-07 1.87e-07 4.57e-07 1.17e-06 8.93e-07 2.6e-07 1.92e-06 4.31e-07 6.3e-07 6.89e-07 1.24e-06 1.19e-06 4.61e-07 4.91e-08 1.27e-07 6.78e-07 5.95e-07 1.28e-07 8.43e-08 1.08e-07 7.56e-08 3.55e-07 2.75e-07 1.57e-06 5.09e-08 1.57e-07 1.82e-07 3.28e-07 1.18e-07 2.71e-09 6.36e-08
ENSG00000118515 \N -973996 5.14e-07 6.07e-07 1.05e-07 4.04e-07 9.26e-08 3.39e-07 6.51e-07 5.48e-08 4.26e-07 1.89e-07 4.88e-07 1.72e-07 1.34e-06 1.59e-07 1.01e-07 2.45e-07 2.25e-07 3.56e-07 1.55e-07 6.73e-08 1.91e-07 3.65e-07 3.81e-07 4.27e-08 6.39e-07 2.74e-07 2.52e-07 2.13e-07 3.88e-07 4.61e-07 2.19e-07 4.71e-08 4.34e-08 1.38e-07 3.34e-07 3.07e-08 5.58e-08 8.51e-08 5.78e-08 1.92e-07 2.81e-08 7.2e-07 4.87e-08 1.99e-07 5.49e-08 7.22e-08 8.93e-08 3.79e-09 4.81e-08