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Genes within 1Mb (chr6:133334233:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -617937 sc-eQTL 5.19e-01 0.053 0.0821 0.449 B L1
ENSG00000079931 MOXD1 932758 sc-eQTL 7.21e-01 0.031 0.0867 0.449 B L1
ENSG00000079950 STX7 821035 sc-eQTL 8.88e-01 -0.00462 0.0327 0.449 B L1
ENSG00000112303 VNN2 570774 sc-eQTL 8.66e-01 -0.0104 0.0615 0.449 B L1
ENSG00000112306 RPS12 519664 sc-eQTL 9.89e-01 0.000508 0.0372 0.449 B L1
ENSG00000118515 SGK1 -983879 sc-eQTL 7.22e-02 -0.103 0.0569 0.449 B L1
ENSG00000146409 SLC18B1 520894 sc-eQTL 9.84e-01 0.00161 0.0783 0.449 B L1
ENSG00000028839 TBPL1 -617937 sc-eQTL 3.64e-01 -0.0551 0.0606 0.449 CD4T L1
ENSG00000079950 STX7 821035 sc-eQTL 7.65e-02 -0.112 0.0626 0.449 CD4T L1
ENSG00000112303 VNN2 570774 sc-eQTL 2.20e-01 0.067 0.0545 0.449 CD4T L1
ENSG00000112306 RPS12 519664 sc-eQTL 7.54e-01 -0.0116 0.0372 0.449 CD4T L1
ENSG00000118515 SGK1 -983879 sc-eQTL 2.83e-02 -0.109 0.0494 0.449 CD4T L1
ENSG00000146409 SLC18B1 520894 sc-eQTL 6.84e-01 -0.0306 0.0752 0.449 CD4T L1
ENSG00000028839 TBPL1 -617937 sc-eQTL 8.18e-01 0.0139 0.0601 0.449 CD8T L1
ENSG00000079950 STX7 821035 sc-eQTL 3.01e-03 0.184 0.0615 0.449 CD8T L1
ENSG00000112303 VNN2 570774 sc-eQTL 1.38e-01 0.109 0.0729 0.449 CD8T L1
ENSG00000112306 RPS12 519664 sc-eQTL 3.25e-01 0.0247 0.025 0.449 CD8T L1
ENSG00000118515 SGK1 -983879 sc-eQTL 3.91e-01 -0.0331 0.0385 0.449 CD8T L1
ENSG00000146409 SLC18B1 520894 sc-eQTL 3.25e-01 0.0745 0.0755 0.449 CD8T L1
ENSG00000028839 TBPL1 -617937 sc-eQTL 3.54e-01 0.0843 0.0907 0.446 DC L1
ENSG00000079950 STX7 821035 sc-eQTL 9.44e-01 -0.00397 0.0565 0.446 DC L1
ENSG00000093134 VNN3 599468 sc-eQTL 5.99e-02 0.131 0.0694 0.446 DC L1
ENSG00000112299 VNN1 620178 sc-eQTL 5.51e-01 -0.0452 0.0756 0.446 DC L1
ENSG00000112303 VNN2 570774 sc-eQTL 5.42e-01 0.0493 0.0808 0.446 DC L1
ENSG00000112306 RPS12 519664 sc-eQTL 3.48e-01 0.0425 0.0453 0.446 DC L1
ENSG00000118515 SGK1 -983879 sc-eQTL 9.19e-01 -0.00534 0.0526 0.446 DC L1
ENSG00000146409 SLC18B1 520894 sc-eQTL 3.43e-01 -0.0681 0.0716 0.446 DC L1
ENSG00000286438 AL591115.1 231105 sc-eQTL 3.98e-01 0.0553 0.0652 0.446 DC L1
ENSG00000286887 AL355881.1 -962068 sc-eQTL 6.72e-01 -0.0345 0.0814 0.446 DC L1
ENSG00000028839 TBPL1 -617937 sc-eQTL 3.52e-02 -0.133 0.0628 0.449 Mono L1
ENSG00000079950 STX7 821035 sc-eQTL 3.62e-01 -0.0387 0.0424 0.449 Mono L1
ENSG00000093134 VNN3 599468 sc-eQTL 3.85e-01 0.0634 0.0728 0.449 Mono L1
ENSG00000112299 VNN1 620178 sc-eQTL 2.86e-01 -0.0836 0.0782 0.449 Mono L1
ENSG00000112303 VNN2 570774 sc-eQTL 1.41e-02 0.135 0.0546 0.449 Mono L1
ENSG00000112306 RPS12 519664 sc-eQTL 7.02e-01 -0.0127 0.0332 0.449 Mono L1
ENSG00000118515 SGK1 -983879 sc-eQTL 9.42e-01 0.00342 0.0468 0.449 Mono L1
ENSG00000146409 SLC18B1 520894 sc-eQTL 7.50e-01 -0.0209 0.0656 0.449 Mono L1
ENSG00000286887 AL355881.1 -962068 sc-eQTL 5.68e-01 -0.0368 0.0644 0.449 Mono L1
ENSG00000028839 TBPL1 -617937 sc-eQTL 3.63e-02 -0.145 0.069 0.448 NK L1
ENSG00000079950 STX7 821035 sc-eQTL 4.10e-01 0.0531 0.0644 0.448 NK L1
ENSG00000112303 VNN2 570774 sc-eQTL 3.51e-01 0.0748 0.0801 0.448 NK L1
ENSG00000112306 RPS12 519664 sc-eQTL 8.62e-01 0.00579 0.0332 0.448 NK L1
ENSG00000118515 SGK1 -983879 sc-eQTL 2.95e-01 0.0643 0.0612 0.448 NK L1
ENSG00000028839 TBPL1 -617937 sc-eQTL 1.82e-01 0.109 0.0815 0.449 Other_T L1
ENSG00000079950 STX7 821035 sc-eQTL 2.44e-01 0.075 0.0642 0.449 Other_T L1
ENSG00000112303 VNN2 570774 sc-eQTL 5.14e-01 -0.0509 0.0779 0.449 Other_T L1
ENSG00000112306 RPS12 519664 sc-eQTL 6.17e-01 0.0155 0.0309 0.449 Other_T L1
ENSG00000118515 SGK1 -983879 sc-eQTL 5.32e-01 -0.0356 0.0568 0.449 Other_T L1
ENSG00000146409 SLC18B1 520894 sc-eQTL 8.59e-01 -0.0151 0.0846 0.449 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -617937 sc-eQTL 5.89e-01 0.0517 0.0955 0.436 B_Activated L2
ENSG00000079931 MOXD1 932758 sc-eQTL 6.63e-01 -0.0381 0.0872 0.436 B_Activated L2
ENSG00000079950 STX7 821035 sc-eQTL 5.51e-01 0.0488 0.0818 0.436 B_Activated L2
ENSG00000112303 VNN2 570774 sc-eQTL 2.76e-01 -0.0949 0.0868 0.436 B_Activated L2
ENSG00000112306 RPS12 519664 sc-eQTL 3.57e-01 0.043 0.0466 0.436 B_Activated L2
ENSG00000118515 SGK1 -983879 sc-eQTL 1.87e-01 -0.11 0.0828 0.436 B_Activated L2
ENSG00000146409 SLC18B1 520894 sc-eQTL 7.68e-01 0.0242 0.0817 0.436 B_Activated L2
ENSG00000028839 TBPL1 -617937 sc-eQTL 2.34e-01 -0.108 0.0907 0.448 B_Intermediate L2
ENSG00000079931 MOXD1 932758 sc-eQTL 4.88e-01 0.0554 0.0798 0.448 B_Intermediate L2
ENSG00000079950 STX7 821035 sc-eQTL 9.86e-01 0.000897 0.0523 0.448 B_Intermediate L2
ENSG00000112303 VNN2 570774 sc-eQTL 4.77e-01 0.056 0.0786 0.448 B_Intermediate L2
ENSG00000112306 RPS12 519664 sc-eQTL 8.40e-01 -0.00975 0.0482 0.448 B_Intermediate L2
ENSG00000118515 SGK1 -983879 sc-eQTL 3.37e-03 -0.242 0.0816 0.448 B_Intermediate L2
ENSG00000146409 SLC18B1 520894 sc-eQTL 8.16e-01 -0.0202 0.0868 0.448 B_Intermediate L2
ENSG00000028839 TBPL1 -617937 sc-eQTL 2.09e-01 0.111 0.0881 0.45 B_Memory L2
ENSG00000079931 MOXD1 932758 sc-eQTL 7.76e-01 -0.0232 0.0816 0.45 B_Memory L2
ENSG00000079950 STX7 821035 sc-eQTL 5.07e-01 0.0425 0.0639 0.45 B_Memory L2
ENSG00000112303 VNN2 570774 sc-eQTL 7.70e-01 0.0245 0.0837 0.45 B_Memory L2
ENSG00000112306 RPS12 519664 sc-eQTL 9.67e-01 0.00165 0.0403 0.45 B_Memory L2
ENSG00000118515 SGK1 -983879 sc-eQTL 9.65e-02 -0.123 0.0735 0.45 B_Memory L2
ENSG00000146409 SLC18B1 520894 sc-eQTL 4.05e-01 -0.0702 0.084 0.45 B_Memory L2
ENSG00000028839 TBPL1 -617937 sc-eQTL 7.61e-01 0.0248 0.0813 0.449 B_Naive1 L2
ENSG00000079931 MOXD1 932758 sc-eQTL 7.16e-01 0.0326 0.0894 0.449 B_Naive1 L2
ENSG00000079950 STX7 821035 sc-eQTL 7.88e-01 -0.0105 0.0391 0.449 B_Naive1 L2
ENSG00000112303 VNN2 570774 sc-eQTL 5.54e-01 -0.0449 0.0758 0.449 B_Naive1 L2
ENSG00000112306 RPS12 519664 sc-eQTL 4.18e-01 -0.035 0.0432 0.449 B_Naive1 L2
ENSG00000118515 SGK1 -983879 sc-eQTL 1.23e-01 -0.104 0.0672 0.449 B_Naive1 L2
ENSG00000146409 SLC18B1 520894 sc-eQTL 3.06e-01 0.0854 0.0832 0.449 B_Naive1 L2
ENSG00000028839 TBPL1 -617937 sc-eQTL 9.49e-02 0.146 0.0869 0.451 B_Naive2 L2
ENSG00000079931 MOXD1 932758 sc-eQTL 6.30e-01 0.0411 0.0852 0.451 B_Naive2 L2
ENSG00000079950 STX7 821035 sc-eQTL 3.35e-01 0.0448 0.0463 0.451 B_Naive2 L2
ENSG00000112303 VNN2 570774 sc-eQTL 6.60e-01 0.0376 0.0852 0.451 B_Naive2 L2
ENSG00000112306 RPS12 519664 sc-eQTL 5.95e-01 -0.024 0.0451 0.451 B_Naive2 L2
ENSG00000118515 SGK1 -983879 sc-eQTL 3.35e-01 -0.0769 0.0796 0.451 B_Naive2 L2
ENSG00000146409 SLC18B1 520894 sc-eQTL 9.68e-01 0.00346 0.0861 0.451 B_Naive2 L2
ENSG00000028839 TBPL1 -617937 sc-eQTL 3.35e-01 -0.0849 0.0879 0.452 CD4_CTL L2
ENSG00000079950 STX7 821035 sc-eQTL 1.10e-01 -0.139 0.0869 0.452 CD4_CTL L2
ENSG00000112303 VNN2 570774 sc-eQTL 4.58e-01 0.0656 0.0881 0.452 CD4_CTL L2
ENSG00000112306 RPS12 519664 sc-eQTL 5.39e-01 -0.025 0.0407 0.452 CD4_CTL L2
ENSG00000118515 SGK1 -983879 sc-eQTL 1.81e-02 -0.166 0.0697 0.452 CD4_CTL L2
ENSG00000146409 SLC18B1 520894 sc-eQTL 4.14e-01 -0.0672 0.0821 0.452 CD4_CTL L2
ENSG00000028839 TBPL1 -617937 sc-eQTL 3.33e-01 0.067 0.0691 0.449 CD4_Naive L2
ENSG00000079950 STX7 821035 sc-eQTL 8.19e-02 -0.118 0.0674 0.449 CD4_Naive L2
ENSG00000112303 VNN2 570774 sc-eQTL 5.54e-01 0.0373 0.0628 0.449 CD4_Naive L2
ENSG00000112306 RPS12 519664 sc-eQTL 2.77e-01 -0.0443 0.0407 0.449 CD4_Naive L2
ENSG00000118515 SGK1 -983879 sc-eQTL 2.09e-02 -0.115 0.0493 0.449 CD4_Naive L2
ENSG00000146409 SLC18B1 520894 sc-eQTL 8.69e-01 -0.013 0.0785 0.449 CD4_Naive L2
ENSG00000028839 TBPL1 -617937 sc-eQTL 4.74e-01 -0.0533 0.0743 0.449 CD4_TCM L2
ENSG00000079950 STX7 821035 sc-eQTL 8.31e-01 -0.016 0.0749 0.449 CD4_TCM L2
ENSG00000112303 VNN2 570774 sc-eQTL 6.12e-02 0.138 0.0732 0.449 CD4_TCM L2
ENSG00000112306 RPS12 519664 sc-eQTL 2.29e-01 0.046 0.0382 0.449 CD4_TCM L2
ENSG00000118515 SGK1 -983879 sc-eQTL 1.80e-01 -0.0717 0.0534 0.449 CD4_TCM L2
ENSG00000146409 SLC18B1 520894 sc-eQTL 8.04e-01 -0.022 0.0887 0.449 CD4_TCM L2
ENSG00000028839 TBPL1 -617937 sc-eQTL 5.54e-01 -0.052 0.0878 0.449 CD4_TEM L2
ENSG00000079950 STX7 821035 sc-eQTL 4.80e-02 0.173 0.0872 0.449 CD4_TEM L2
ENSG00000112303 VNN2 570774 sc-eQTL 4.31e-01 -0.0665 0.0843 0.449 CD4_TEM L2
ENSG00000112306 RPS12 519664 sc-eQTL 7.22e-01 -0.0124 0.0346 0.449 CD4_TEM L2
ENSG00000118515 SGK1 -983879 sc-eQTL 2.26e-01 -0.072 0.0593 0.449 CD4_TEM L2
ENSG00000146409 SLC18B1 520894 sc-eQTL 8.42e-01 0.0172 0.086 0.449 CD4_TEM L2
ENSG00000028839 TBPL1 -617937 sc-eQTL 8.48e-01 0.0145 0.0757 0.449 CD8_CTL L2
ENSG00000079950 STX7 821035 sc-eQTL 5.26e-03 0.196 0.0695 0.449 CD8_CTL L2
ENSG00000112303 VNN2 570774 sc-eQTL 2.92e-01 0.0846 0.0802 0.449 CD8_CTL L2
ENSG00000112306 RPS12 519664 sc-eQTL 4.09e-01 0.0355 0.043 0.449 CD8_CTL L2
ENSG00000118515 SGK1 -983879 sc-eQTL 1.34e-01 -0.109 0.0723 0.449 CD8_CTL L2
ENSG00000146409 SLC18B1 520894 sc-eQTL 7.76e-02 0.147 0.0828 0.449 CD8_CTL L2
ENSG00000028839 TBPL1 -617937 sc-eQTL 4.41e-01 -0.0625 0.081 0.449 CD8_Naive L2
ENSG00000079950 STX7 821035 sc-eQTL 1.02e-01 0.141 0.0859 0.449 CD8_Naive L2
ENSG00000112303 VNN2 570774 sc-eQTL 1.46e-01 0.108 0.0742 0.449 CD8_Naive L2
ENSG00000112306 RPS12 519664 sc-eQTL 8.50e-01 -0.0081 0.0427 0.449 CD8_Naive L2
ENSG00000118515 SGK1 -983879 sc-eQTL 1.00e-01 -0.0879 0.0532 0.449 CD8_Naive L2
ENSG00000146409 SLC18B1 520894 sc-eQTL 7.71e-01 0.0249 0.0856 0.449 CD8_Naive L2
ENSG00000028839 TBPL1 -617937 sc-eQTL 7.62e-01 -0.028 0.0924 0.461 CD8_TCM L2
ENSG00000079950 STX7 821035 sc-eQTL 6.53e-01 0.0385 0.0855 0.461 CD8_TCM L2
ENSG00000112303 VNN2 570774 sc-eQTL 8.55e-01 -0.0156 0.0849 0.461 CD8_TCM L2
ENSG00000112306 RPS12 519664 sc-eQTL 2.36e-01 -0.049 0.0412 0.461 CD8_TCM L2
ENSG00000118515 SGK1 -983879 sc-eQTL 1.11e-01 -0.109 0.0681 0.461 CD8_TCM L2
ENSG00000146409 SLC18B1 520894 sc-eQTL 2.65e-01 0.101 0.0904 0.461 CD8_TCM L2
ENSG00000028839 TBPL1 -617937 sc-eQTL 2.94e-01 -0.0877 0.0833 0.443 CD8_TEM L2
ENSG00000079950 STX7 821035 sc-eQTL 7.00e-01 -0.0352 0.0911 0.443 CD8_TEM L2
ENSG00000112303 VNN2 570774 sc-eQTL 1.95e-01 -0.117 0.0902 0.443 CD8_TEM L2
ENSG00000112306 RPS12 519664 sc-eQTL 6.15e-01 -0.0245 0.0487 0.443 CD8_TEM L2
ENSG00000118515 SGK1 -983879 sc-eQTL 5.72e-01 0.0452 0.0798 0.443 CD8_TEM L2
ENSG00000146409 SLC18B1 520894 sc-eQTL 5.98e-01 -0.0487 0.0921 0.443 CD8_TEM L2
ENSG00000028839 TBPL1 -617937 sc-eQTL 9.86e-01 -0.00149 0.0867 0.45 MAIT L2
ENSG00000079950 STX7 821035 sc-eQTL 7.77e-01 -0.0234 0.0824 0.45 MAIT L2
ENSG00000112303 VNN2 570774 sc-eQTL 7.36e-01 0.0282 0.0838 0.45 MAIT L2
ENSG00000112306 RPS12 519664 sc-eQTL 9.02e-01 -0.00506 0.0412 0.45 MAIT L2
ENSG00000118515 SGK1 -983879 sc-eQTL 7.11e-01 -0.0215 0.058 0.45 MAIT L2
ENSG00000146409 SLC18B1 520894 sc-eQTL 5.87e-01 -0.047 0.0864 0.45 MAIT L2
ENSG00000028839 TBPL1 -617937 sc-eQTL 5.71e-01 0.0522 0.092 0.447 NK_CD56bright L2
ENSG00000079950 STX7 821035 sc-eQTL 9.27e-01 -0.0078 0.0853 0.447 NK_CD56bright L2
ENSG00000112303 VNN2 570774 sc-eQTL 7.26e-01 0.0305 0.0866 0.447 NK_CD56bright L2
ENSG00000112306 RPS12 519664 sc-eQTL 2.05e-01 0.0612 0.0481 0.447 NK_CD56bright L2
ENSG00000118515 SGK1 -983879 sc-eQTL 7.62e-01 -0.0219 0.0722 0.447 NK_CD56bright L2
ENSG00000028839 TBPL1 -617937 sc-eQTL 2.65e-02 -0.165 0.0741 0.448 NK_CD56dim L2
ENSG00000079950 STX7 821035 sc-eQTL 3.77e-01 0.0606 0.0685 0.448 NK_CD56dim L2
ENSG00000112303 VNN2 570774 sc-eQTL 2.53e-01 0.0981 0.0855 0.448 NK_CD56dim L2
ENSG00000112306 RPS12 519664 sc-eQTL 6.45e-01 0.0157 0.034 0.448 NK_CD56dim L2
ENSG00000118515 SGK1 -983879 sc-eQTL 3.56e-01 0.0696 0.0753 0.448 NK_CD56dim L2
ENSG00000028839 TBPL1 -617937 sc-eQTL 9.17e-01 -0.00987 0.094 0.443 NK_HLA L2
ENSG00000079950 STX7 821035 sc-eQTL 7.61e-02 0.151 0.0849 0.443 NK_HLA L2
ENSG00000112303 VNN2 570774 sc-eQTL 4.78e-01 -0.0615 0.0865 0.443 NK_HLA L2
ENSG00000112306 RPS12 519664 sc-eQTL 5.30e-01 0.0254 0.0403 0.443 NK_HLA L2
ENSG00000118515 SGK1 -983879 sc-eQTL 5.83e-01 0.0438 0.0797 0.443 NK_HLA L2
ENSG00000028839 TBPL1 -617937 sc-eQTL 1.05e-01 -0.126 0.0774 0.448 NK_cytokine L2
ENSG00000079950 STX7 821035 sc-eQTL 6.26e-01 -0.0368 0.0754 0.448 NK_cytokine L2
ENSG00000112303 VNN2 570774 sc-eQTL 9.52e-01 0.00514 0.0849 0.448 NK_cytokine L2
ENSG00000112306 RPS12 519664 sc-eQTL 6.03e-01 0.0239 0.046 0.448 NK_cytokine L2
ENSG00000118515 SGK1 -983879 sc-eQTL 8.86e-01 0.011 0.0766 0.448 NK_cytokine L2
ENSG00000028839 TBPL1 -617937 sc-eQTL 4.65e-01 -0.0787 0.107 0.437 PB L2
ENSG00000079931 MOXD1 932758 sc-eQTL 9.28e-01 0.00837 0.0918 0.437 PB L2
ENSG00000079950 STX7 821035 sc-eQTL 5.74e-02 0.145 0.0754 0.437 PB L2
ENSG00000112303 VNN2 570774 sc-eQTL 3.83e-01 0.0817 0.0933 0.437 PB L2
ENSG00000112306 RPS12 519664 sc-eQTL 6.73e-01 -0.0225 0.0531 0.437 PB L2
ENSG00000118515 SGK1 -983879 sc-eQTL 2.04e-01 -0.109 0.0852 0.437 PB L2
ENSG00000146409 SLC18B1 520894 sc-eQTL 6.88e-01 0.04 0.0995 0.437 PB L2
ENSG00000028839 TBPL1 -617937 sc-eQTL 9.49e-01 -0.00568 0.0886 0.448 Pro_T L2
ENSG00000079950 STX7 821035 sc-eQTL 1.20e-01 0.123 0.0786 0.448 Pro_T L2
ENSG00000112303 VNN2 570774 sc-eQTL 6.09e-01 0.0435 0.0848 0.448 Pro_T L2
ENSG00000112306 RPS12 519664 sc-eQTL 6.76e-01 0.0134 0.0321 0.448 Pro_T L2
ENSG00000118515 SGK1 -983879 sc-eQTL 5.00e-01 -0.0435 0.0643 0.448 Pro_T L2
ENSG00000146409 SLC18B1 520894 sc-eQTL 8.01e-01 -0.021 0.083 0.448 Pro_T L2
ENSG00000028839 TBPL1 -617937 sc-eQTL 9.30e-01 -0.00787 0.0893 0.449 Treg L2
ENSG00000079950 STX7 821035 sc-eQTL 2.17e-02 -0.192 0.0831 0.449 Treg L2
ENSG00000112303 VNN2 570774 sc-eQTL 8.83e-01 -0.0105 0.0708 0.449 Treg L2
ENSG00000112306 RPS12 519664 sc-eQTL 8.38e-01 0.00639 0.0313 0.449 Treg L2
ENSG00000118515 SGK1 -983879 sc-eQTL 4.84e-01 -0.0463 0.0659 0.449 Treg L2
ENSG00000146409 SLC18B1 520894 sc-eQTL 8.95e-02 -0.15 0.0879 0.449 Treg L2
ENSG00000028839 TBPL1 -617937 sc-eQTL 2.69e-01 0.103 0.0924 0.446 cDC L2
ENSG00000079950 STX7 821035 sc-eQTL 8.86e-01 0.0104 0.0728 0.446 cDC L2
ENSG00000093134 VNN3 599468 sc-eQTL 4.08e-02 0.147 0.0715 0.446 cDC L2
ENSG00000112299 VNN1 620178 sc-eQTL 6.52e-01 -0.0383 0.085 0.446 cDC L2
ENSG00000112303 VNN2 570774 sc-eQTL 3.88e-01 0.0715 0.0827 0.446 cDC L2
ENSG00000112306 RPS12 519664 sc-eQTL 1.26e-01 0.0625 0.0406 0.446 cDC L2
ENSG00000118515 SGK1 -983879 sc-eQTL 5.50e-01 -0.0412 0.0688 0.446 cDC L2
ENSG00000146409 SLC18B1 520894 sc-eQTL 9.76e-01 -0.00247 0.081 0.446 cDC L2
ENSG00000286438 AL591115.1 231105 sc-eQTL 1.87e-01 0.0854 0.0644 0.446 cDC L2
ENSG00000286887 AL355881.1 -962068 sc-eQTL 1.50e-01 -0.115 0.0792 0.446 cDC L2
ENSG00000028839 TBPL1 -617937 sc-eQTL 2.26e-01 -0.0877 0.0723 0.449 cMono_IL1B L2
ENSG00000079950 STX7 821035 sc-eQTL 8.91e-01 -0.00757 0.055 0.449 cMono_IL1B L2
ENSG00000093134 VNN3 599468 sc-eQTL 5.37e-01 0.048 0.0777 0.449 cMono_IL1B L2
ENSG00000112299 VNN1 620178 sc-eQTL 5.35e-01 -0.0487 0.0784 0.449 cMono_IL1B L2
ENSG00000112303 VNN2 570774 sc-eQTL 1.03e-01 0.102 0.0623 0.449 cMono_IL1B L2
ENSG00000112306 RPS12 519664 sc-eQTL 5.51e-01 -0.0208 0.0348 0.449 cMono_IL1B L2
ENSG00000118515 SGK1 -983879 sc-eQTL 7.09e-01 0.0194 0.0519 0.449 cMono_IL1B L2
ENSG00000146409 SLC18B1 520894 sc-eQTL 2.71e-01 -0.074 0.067 0.449 cMono_IL1B L2
ENSG00000286887 AL355881.1 -962068 sc-eQTL 5.73e-01 -0.0395 0.0699 0.449 cMono_IL1B L2
ENSG00000028839 TBPL1 -617937 sc-eQTL 2.47e-01 -0.0958 0.0825 0.449 cMono_S100A L2
ENSG00000079950 STX7 821035 sc-eQTL 1.83e-01 -0.0795 0.0595 0.449 cMono_S100A L2
ENSG00000093134 VNN3 599468 sc-eQTL 5.41e-01 -0.0456 0.0746 0.449 cMono_S100A L2
ENSG00000112299 VNN1 620178 sc-eQTL 1.22e-01 -0.125 0.0806 0.449 cMono_S100A L2
ENSG00000112303 VNN2 570774 sc-eQTL 4.99e-02 0.104 0.0526 0.449 cMono_S100A L2
ENSG00000112306 RPS12 519664 sc-eQTL 3.70e-01 -0.0343 0.0382 0.449 cMono_S100A L2
ENSG00000118515 SGK1 -983879 sc-eQTL 5.03e-01 -0.0293 0.0437 0.449 cMono_S100A L2
ENSG00000146409 SLC18B1 520894 sc-eQTL 3.71e-01 0.0633 0.0706 0.449 cMono_S100A L2
ENSG00000286887 AL355881.1 -962068 sc-eQTL 4.59e-01 0.0513 0.0691 0.449 cMono_S100A L2
ENSG00000028839 TBPL1 -617937 sc-eQTL 5.09e-01 0.0759 0.115 0.439 gdT L2
ENSG00000079950 STX7 821035 sc-eQTL 7.96e-01 0.0256 0.0988 0.439 gdT L2
ENSG00000112303 VNN2 570774 sc-eQTL 3.06e-01 -0.112 0.109 0.439 gdT L2
ENSG00000112306 RPS12 519664 sc-eQTL 8.00e-01 0.0106 0.0416 0.439 gdT L2
ENSG00000118515 SGK1 -983879 sc-eQTL 4.85e-01 -0.055 0.0784 0.439 gdT L2
ENSG00000146409 SLC18B1 520894 sc-eQTL 5.66e-01 0.0618 0.107 0.439 gdT L2
ENSG00000028839 TBPL1 -617937 sc-eQTL 1.81e-01 -0.112 0.0837 0.453 intMono L2
ENSG00000079950 STX7 821035 sc-eQTL 7.09e-01 -0.03 0.0803 0.453 intMono L2
ENSG00000093134 VNN3 599468 sc-eQTL 4.26e-02 0.164 0.0802 0.453 intMono L2
ENSG00000112299 VNN1 620178 sc-eQTL 4.12e-01 -0.0658 0.08 0.453 intMono L2
ENSG00000112303 VNN2 570774 sc-eQTL 7.87e-01 -0.0221 0.0814 0.453 intMono L2
ENSG00000112306 RPS12 519664 sc-eQTL 8.88e-01 0.00502 0.0354 0.453 intMono L2
ENSG00000118515 SGK1 -983879 sc-eQTL 6.98e-01 0.0232 0.0595 0.453 intMono L2
ENSG00000146409 SLC18B1 520894 sc-eQTL 9.20e-01 -0.00869 0.0863 0.453 intMono L2
ENSG00000286887 AL355881.1 -962068 sc-eQTL 2.04e-01 -0.105 0.0822 0.453 intMono L2
ENSG00000028839 TBPL1 -617937 sc-eQTL 1.88e-01 -0.117 0.089 0.45 ncMono L2
ENSG00000079950 STX7 821035 sc-eQTL 4.51e-01 0.0456 0.0604 0.45 ncMono L2
ENSG00000093134 VNN3 599468 sc-eQTL 8.47e-02 0.147 0.0847 0.45 ncMono L2
ENSG00000112299 VNN1 620178 sc-eQTL 5.51e-01 -0.0506 0.0846 0.45 ncMono L2
ENSG00000112303 VNN2 570774 sc-eQTL 4.08e-01 0.0673 0.0813 0.45 ncMono L2
ENSG00000112306 RPS12 519664 sc-eQTL 7.11e-01 0.0152 0.0408 0.45 ncMono L2
ENSG00000118515 SGK1 -983879 sc-eQTL 9.85e-01 0.0011 0.0578 0.45 ncMono L2
ENSG00000146409 SLC18B1 520894 sc-eQTL 3.03e-01 0.0743 0.0719 0.45 ncMono L2
ENSG00000286887 AL355881.1 -962068 sc-eQTL 8.91e-01 0.0105 0.0762 0.45 ncMono L2
ENSG00000028839 TBPL1 -617937 sc-eQTL 9.86e-01 -0.00188 0.106 0.441 pDC L2
ENSG00000079950 STX7 821035 sc-eQTL 3.12e-01 0.0715 0.0705 0.441 pDC L2
ENSG00000093134 VNN3 599468 sc-eQTL 5.88e-01 0.0386 0.0711 0.441 pDC L2
ENSG00000112299 VNN1 620178 sc-eQTL 6.13e-01 -0.0367 0.0724 0.441 pDC L2
ENSG00000112303 VNN2 570774 sc-eQTL 3.04e-01 0.0887 0.086 0.441 pDC L2
ENSG00000112306 RPS12 519664 sc-eQTL 1.84e-01 0.0788 0.0591 0.441 pDC L2
ENSG00000118515 SGK1 -983879 sc-eQTL 7.05e-01 0.0229 0.0604 0.441 pDC L2
ENSG00000146409 SLC18B1 520894 sc-eQTL 6.06e-01 0.0455 0.0879 0.441 pDC L2
ENSG00000286438 AL591115.1 231105 sc-eQTL 2.94e-01 0.0882 0.0839 0.441 pDC L2
ENSG00000286887 AL355881.1 -962068 sc-eQTL 8.65e-01 -0.0127 0.0746 0.441 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -617937 sc-eQTL 6.62e-01 -0.0386 0.0882 0.449 B_Memory LOneK1K
ENSG00000079931 MOXD1 932758 sc-eQTL 5.39e-01 0.0527 0.0856 0.449 B_Memory LOneK1K
ENSG00000079950 STX7 821035 sc-eQTL 9.39e-01 0.0037 0.0486 0.449 B_Memory LOneK1K
ENSG00000112303 VNN2 570774 sc-eQTL 8.71e-01 0.0125 0.0768 0.449 B_Memory LOneK1K
ENSG00000112306 RPS12 519664 sc-eQTL 8.58e-01 -0.00782 0.0438 0.449 B_Memory LOneK1K
ENSG00000118515 SGK1 -983879 sc-eQTL 5.86e-03 -0.187 0.0672 0.449 B_Memory LOneK1K
ENSG00000146409 SLC18B1 520894 sc-eQTL 9.12e-01 -0.00893 0.0803 0.449 B_Memory LOneK1K
ENSG00000028839 TBPL1 -617937 sc-eQTL 2.68e-01 0.0907 0.0816 0.449 B_Naive LOneK1K
ENSG00000079931 MOXD1 932758 sc-eQTL 5.46e-01 0.0543 0.0898 0.449 B_Naive LOneK1K
ENSG00000079950 STX7 821035 sc-eQTL 9.15e-01 0.00395 0.0369 0.449 B_Naive LOneK1K
ENSG00000112303 VNN2 570774 sc-eQTL 9.92e-01 0.000694 0.0716 0.449 B_Naive LOneK1K
ENSG00000112306 RPS12 519664 sc-eQTL 6.17e-01 -0.0217 0.0433 0.449 B_Naive LOneK1K
ENSG00000118515 SGK1 -983879 sc-eQTL 1.49e-01 -0.0966 0.0668 0.449 B_Naive LOneK1K
ENSG00000146409 SLC18B1 520894 sc-eQTL 5.31e-01 0.0512 0.0817 0.449 B_Naive LOneK1K
ENSG00000028839 TBPL1 -617937 sc-eQTL 7.92e-02 -0.115 0.0655 0.449 CD14_Mono LOneK1K
ENSG00000079950 STX7 821035 sc-eQTL 3.00e-01 -0.0476 0.0458 0.449 CD14_Mono LOneK1K
ENSG00000093134 VNN3 599468 sc-eQTL 6.95e-01 0.0293 0.0747 0.449 CD14_Mono LOneK1K
ENSG00000112299 VNN1 620178 sc-eQTL 2.25e-01 -0.0945 0.0777 0.449 CD14_Mono LOneK1K
ENSG00000112303 VNN2 570774 sc-eQTL 5.68e-02 0.0979 0.0511 0.449 CD14_Mono LOneK1K
ENSG00000112306 RPS12 519664 sc-eQTL 6.60e-01 -0.0156 0.0353 0.449 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -983879 sc-eQTL 9.58e-01 0.00254 0.0482 0.449 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 520894 sc-eQTL 6.95e-01 -0.0247 0.0629 0.449 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -962068 sc-eQTL 9.95e-01 -0.000437 0.066 0.449 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -617937 sc-eQTL 1.12e-01 -0.136 0.0855 0.448 CD16_Mono LOneK1K
ENSG00000079950 STX7 821035 sc-eQTL 7.68e-01 0.0168 0.0567 0.448 CD16_Mono LOneK1K
ENSG00000093134 VNN3 599468 sc-eQTL 1.90e-03 0.256 0.0816 0.448 CD16_Mono LOneK1K
ENSG00000112299 VNN1 620178 sc-eQTL 9.97e-01 0.000332 0.0827 0.448 CD16_Mono LOneK1K
ENSG00000112303 VNN2 570774 sc-eQTL 3.78e-01 0.0688 0.0778 0.448 CD16_Mono LOneK1K
ENSG00000112306 RPS12 519664 sc-eQTL 6.92e-01 -0.0131 0.0331 0.448 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -983879 sc-eQTL 8.10e-01 0.0121 0.0501 0.448 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 520894 sc-eQTL 7.05e-01 0.0305 0.0803 0.448 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -962068 sc-eQTL 7.49e-02 -0.129 0.0721 0.448 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -617937 sc-eQTL 1.53e-02 -0.166 0.068 0.448 NK_CD56dim LOneK1K
ENSG00000079950 STX7 821035 sc-eQTL 4.54e-01 0.0486 0.0647 0.448 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 570774 sc-eQTL 3.37e-01 0.0788 0.0819 0.448 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 519664 sc-eQTL 7.44e-01 0.0109 0.0335 0.448 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -983879 sc-eQTL 6.50e-01 0.0314 0.0691 0.448 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000112299 VNN1 620178 pQTL 0.00375 -0.103 0.0353 0.0 0.0 0.411

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina