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Genes within 1Mb (chr6:133333247:A:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -618923 sc-eQTL 5.51e-01 0.0492 0.0824 0.451 B L1
ENSG00000079931 MOXD1 931772 sc-eQTL 6.16e-01 0.0437 0.087 0.451 B L1
ENSG00000079950 STX7 820049 sc-eQTL 8.46e-01 -0.00637 0.0328 0.451 B L1
ENSG00000112303 VNN2 569788 sc-eQTL 8.14e-01 -0.0145 0.0617 0.451 B L1
ENSG00000112306 RPS12 518678 sc-eQTL 9.76e-01 0.00112 0.0373 0.451 B L1
ENSG00000118515 SGK1 -984865 sc-eQTL 6.83e-02 -0.105 0.0571 0.451 B L1
ENSG00000146409 SLC18B1 519908 sc-eQTL 9.15e-01 0.00837 0.0786 0.451 B L1
ENSG00000028839 TBPL1 -618923 sc-eQTL 4.07e-01 -0.0506 0.0609 0.451 CD4T L1
ENSG00000079950 STX7 820049 sc-eQTL 9.38e-02 -0.106 0.063 0.451 CD4T L1
ENSG00000112303 VNN2 569788 sc-eQTL 2.21e-01 0.0672 0.0548 0.451 CD4T L1
ENSG00000112306 RPS12 518678 sc-eQTL 6.92e-01 -0.0148 0.0374 0.451 CD4T L1
ENSG00000118515 SGK1 -984865 sc-eQTL 2.43e-02 -0.113 0.0496 0.451 CD4T L1
ENSG00000146409 SLC18B1 519908 sc-eQTL 6.66e-01 -0.0326 0.0756 0.451 CD4T L1
ENSG00000028839 TBPL1 -618923 sc-eQTL 7.94e-01 0.0158 0.0603 0.451 CD8T L1
ENSG00000079950 STX7 820049 sc-eQTL 2.72e-03 0.187 0.0617 0.451 CD8T L1
ENSG00000112303 VNN2 569788 sc-eQTL 1.55e-01 0.104 0.0732 0.451 CD8T L1
ENSG00000112306 RPS12 518678 sc-eQTL 3.64e-01 0.0228 0.0251 0.451 CD8T L1
ENSG00000118515 SGK1 -984865 sc-eQTL 4.33e-01 -0.0304 0.0387 0.451 CD8T L1
ENSG00000146409 SLC18B1 519908 sc-eQTL 3.27e-01 0.0745 0.0758 0.451 CD8T L1
ENSG00000028839 TBPL1 -618923 sc-eQTL 3.42e-01 0.0869 0.0912 0.448 DC L1
ENSG00000079950 STX7 820049 sc-eQTL 9.66e-01 -0.0024 0.0568 0.448 DC L1
ENSG00000093134 VNN3 598482 sc-eQTL 5.74e-02 0.133 0.0698 0.448 DC L1
ENSG00000112299 VNN1 619192 sc-eQTL 5.92e-01 -0.0408 0.076 0.448 DC L1
ENSG00000112303 VNN2 569788 sc-eQTL 5.83e-01 0.0447 0.0813 0.448 DC L1
ENSG00000112306 RPS12 518678 sc-eQTL 2.99e-01 0.0473 0.0455 0.448 DC L1
ENSG00000118515 SGK1 -984865 sc-eQTL 9.97e-01 -0.000205 0.0529 0.448 DC L1
ENSG00000146409 SLC18B1 519908 sc-eQTL 4.04e-01 -0.0603 0.0721 0.448 DC L1
ENSG00000286438 AL591115.1 230119 sc-eQTL 4.07e-01 0.0545 0.0656 0.448 DC L1
ENSG00000286887 AL355881.1 -963054 sc-eQTL 6.87e-01 -0.0331 0.0819 0.448 DC L1
ENSG00000028839 TBPL1 -618923 sc-eQTL 4.81e-02 -0.126 0.0632 0.451 Mono L1
ENSG00000079950 STX7 820049 sc-eQTL 3.53e-01 -0.0396 0.0426 0.451 Mono L1
ENSG00000093134 VNN3 598482 sc-eQTL 3.77e-01 0.0647 0.0731 0.451 Mono L1
ENSG00000112299 VNN1 619192 sc-eQTL 3.37e-01 -0.0756 0.0786 0.451 Mono L1
ENSG00000112303 VNN2 569788 sc-eQTL 1.15e-02 0.14 0.0548 0.451 Mono L1
ENSG00000112306 RPS12 518678 sc-eQTL 6.83e-01 -0.0136 0.0333 0.451 Mono L1
ENSG00000118515 SGK1 -984865 sc-eQTL 9.85e-01 0.000879 0.0471 0.451 Mono L1
ENSG00000146409 SLC18B1 519908 sc-eQTL 8.29e-01 -0.0143 0.0659 0.451 Mono L1
ENSG00000286887 AL355881.1 -963054 sc-eQTL 5.83e-01 -0.0356 0.0647 0.451 Mono L1
ENSG00000028839 TBPL1 -618923 sc-eQTL 3.68e-02 -0.145 0.0692 0.451 NK L1
ENSG00000079950 STX7 820049 sc-eQTL 3.78e-01 0.057 0.0646 0.451 NK L1
ENSG00000112303 VNN2 569788 sc-eQTL 3.85e-01 0.0699 0.0803 0.451 NK L1
ENSG00000112306 RPS12 518678 sc-eQTL 8.73e-01 0.00534 0.0333 0.451 NK L1
ENSG00000118515 SGK1 -984865 sc-eQTL 2.67e-01 0.0684 0.0614 0.451 NK L1
ENSG00000028839 TBPL1 -618923 sc-eQTL 2.16e-01 0.101 0.0818 0.451 Other_T L1
ENSG00000079950 STX7 820049 sc-eQTL 2.23e-01 0.0788 0.0644 0.451 Other_T L1
ENSG00000112303 VNN2 569788 sc-eQTL 5.18e-01 -0.0506 0.0781 0.451 Other_T L1
ENSG00000112306 RPS12 518678 sc-eQTL 6.94e-01 0.0122 0.031 0.451 Other_T L1
ENSG00000118515 SGK1 -984865 sc-eQTL 5.77e-01 -0.0319 0.057 0.451 Other_T L1
ENSG00000146409 SLC18B1 519908 sc-eQTL 9.26e-01 -0.00786 0.0849 0.451 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -618923 sc-eQTL 6.12e-01 0.0487 0.0959 0.439 B_Activated L2
ENSG00000079931 MOXD1 931772 sc-eQTL 7.33e-01 -0.0299 0.0876 0.439 B_Activated L2
ENSG00000079950 STX7 820049 sc-eQTL 4.60e-01 0.0608 0.082 0.439 B_Activated L2
ENSG00000112303 VNN2 569788 sc-eQTL 2.74e-01 -0.0956 0.0871 0.439 B_Activated L2
ENSG00000112306 RPS12 518678 sc-eQTL 3.34e-01 0.0453 0.0467 0.439 B_Activated L2
ENSG00000118515 SGK1 -984865 sc-eQTL 1.81e-01 -0.112 0.0831 0.439 B_Activated L2
ENSG00000146409 SLC18B1 519908 sc-eQTL 7.10e-01 0.0305 0.082 0.439 B_Activated L2
ENSG00000028839 TBPL1 -618923 sc-eQTL 2.55e-01 -0.104 0.091 0.451 B_Intermediate L2
ENSG00000079931 MOXD1 931772 sc-eQTL 4.38e-01 0.0621 0.08 0.451 B_Intermediate L2
ENSG00000079950 STX7 820049 sc-eQTL 9.30e-01 -0.00458 0.0524 0.451 B_Intermediate L2
ENSG00000112303 VNN2 569788 sc-eQTL 4.75e-01 0.0565 0.0789 0.451 B_Intermediate L2
ENSG00000112306 RPS12 518678 sc-eQTL 8.59e-01 -0.00863 0.0484 0.451 B_Intermediate L2
ENSG00000118515 SGK1 -984865 sc-eQTL 3.94e-03 -0.239 0.082 0.451 B_Intermediate L2
ENSG00000146409 SLC18B1 519908 sc-eQTL 8.68e-01 -0.0145 0.0871 0.451 B_Intermediate L2
ENSG00000028839 TBPL1 -618923 sc-eQTL 2.31e-01 0.106 0.0885 0.453 B_Memory L2
ENSG00000079931 MOXD1 931772 sc-eQTL 8.24e-01 -0.0182 0.0819 0.453 B_Memory L2
ENSG00000079950 STX7 820049 sc-eQTL 4.83e-01 0.0451 0.0642 0.453 B_Memory L2
ENSG00000112303 VNN2 569788 sc-eQTL 8.69e-01 0.0138 0.084 0.453 B_Memory L2
ENSG00000112306 RPS12 518678 sc-eQTL 9.39e-01 0.00312 0.0405 0.453 B_Memory L2
ENSG00000118515 SGK1 -984865 sc-eQTL 9.36e-02 -0.124 0.0738 0.453 B_Memory L2
ENSG00000146409 SLC18B1 519908 sc-eQTL 3.78e-01 -0.0745 0.0843 0.453 B_Memory L2
ENSG00000028839 TBPL1 -618923 sc-eQTL 7.48e-01 0.0262 0.0816 0.451 B_Naive1 L2
ENSG00000079931 MOXD1 931772 sc-eQTL 6.86e-01 0.0364 0.0897 0.451 B_Naive1 L2
ENSG00000079950 STX7 820049 sc-eQTL 7.05e-01 -0.0148 0.0392 0.451 B_Naive1 L2
ENSG00000112303 VNN2 569788 sc-eQTL 5.98e-01 -0.0402 0.0761 0.451 B_Naive1 L2
ENSG00000112306 RPS12 518678 sc-eQTL 4.07e-01 -0.036 0.0433 0.451 B_Naive1 L2
ENSG00000118515 SGK1 -984865 sc-eQTL 1.08e-01 -0.109 0.0674 0.451 B_Naive1 L2
ENSG00000146409 SLC18B1 519908 sc-eQTL 2.55e-01 0.0953 0.0834 0.451 B_Naive1 L2
ENSG00000028839 TBPL1 -618923 sc-eQTL 1.14e-01 0.138 0.0872 0.453 B_Naive2 L2
ENSG00000079931 MOXD1 931772 sc-eQTL 5.41e-01 0.0524 0.0855 0.453 B_Naive2 L2
ENSG00000079950 STX7 820049 sc-eQTL 3.48e-01 0.0438 0.0465 0.453 B_Naive2 L2
ENSG00000112303 VNN2 569788 sc-eQTL 6.75e-01 0.0359 0.0855 0.453 B_Naive2 L2
ENSG00000112306 RPS12 518678 sc-eQTL 6.24e-01 -0.0222 0.0453 0.453 B_Naive2 L2
ENSG00000118515 SGK1 -984865 sc-eQTL 3.29e-01 -0.0781 0.0799 0.453 B_Naive2 L2
ENSG00000146409 SLC18B1 519908 sc-eQTL 9.38e-01 0.00674 0.0864 0.453 B_Naive2 L2
ENSG00000028839 TBPL1 -618923 sc-eQTL 3.19e-01 -0.0882 0.0883 0.455 CD4_CTL L2
ENSG00000079950 STX7 820049 sc-eQTL 1.27e-01 -0.134 0.0874 0.455 CD4_CTL L2
ENSG00000112303 VNN2 569788 sc-eQTL 4.69e-01 0.0642 0.0886 0.455 CD4_CTL L2
ENSG00000112306 RPS12 518678 sc-eQTL 4.92e-01 -0.0282 0.0409 0.455 CD4_CTL L2
ENSG00000118515 SGK1 -984865 sc-eQTL 1.75e-02 -0.168 0.0701 0.455 CD4_CTL L2
ENSG00000146409 SLC18B1 519908 sc-eQTL 4.35e-01 -0.0645 0.0825 0.455 CD4_CTL L2
ENSG00000028839 TBPL1 -618923 sc-eQTL 2.99e-01 0.0722 0.0693 0.451 CD4_Naive L2
ENSG00000079950 STX7 820049 sc-eQTL 9.56e-02 -0.113 0.0677 0.451 CD4_Naive L2
ENSG00000112303 VNN2 569788 sc-eQTL 5.37e-01 0.039 0.0631 0.451 CD4_Naive L2
ENSG00000112306 RPS12 518678 sc-eQTL 2.43e-01 -0.0478 0.0408 0.451 CD4_Naive L2
ENSG00000118515 SGK1 -984865 sc-eQTL 2.00e-02 -0.116 0.0495 0.451 CD4_Naive L2
ENSG00000146409 SLC18B1 519908 sc-eQTL 7.82e-01 -0.0218 0.0788 0.451 CD4_Naive L2
ENSG00000028839 TBPL1 -618923 sc-eQTL 4.82e-01 -0.0526 0.0747 0.451 CD4_TCM L2
ENSG00000079950 STX7 820049 sc-eQTL 8.29e-01 -0.0163 0.0753 0.451 CD4_TCM L2
ENSG00000112303 VNN2 569788 sc-eQTL 5.71e-02 0.141 0.0736 0.451 CD4_TCM L2
ENSG00000112306 RPS12 518678 sc-eQTL 2.31e-01 0.046 0.0383 0.451 CD4_TCM L2
ENSG00000118515 SGK1 -984865 sc-eQTL 1.73e-01 -0.0733 0.0536 0.451 CD4_TCM L2
ENSG00000146409 SLC18B1 519908 sc-eQTL 8.25e-01 -0.0198 0.0891 0.451 CD4_TCM L2
ENSG00000028839 TBPL1 -618923 sc-eQTL 6.38e-01 -0.0416 0.0883 0.451 CD4_TEM L2
ENSG00000079950 STX7 820049 sc-eQTL 4.93e-02 0.173 0.0876 0.451 CD4_TEM L2
ENSG00000112303 VNN2 569788 sc-eQTL 3.68e-01 -0.0763 0.0847 0.451 CD4_TEM L2
ENSG00000112306 RPS12 518678 sc-eQTL 6.63e-01 -0.0152 0.0348 0.451 CD4_TEM L2
ENSG00000118515 SGK1 -984865 sc-eQTL 2.21e-01 -0.0731 0.0596 0.451 CD4_TEM L2
ENSG00000146409 SLC18B1 519908 sc-eQTL 7.61e-01 0.0263 0.0865 0.451 CD4_TEM L2
ENSG00000028839 TBPL1 -618923 sc-eQTL 9.06e-01 0.00895 0.076 0.451 CD8_CTL L2
ENSG00000079950 STX7 820049 sc-eQTL 3.97e-03 0.203 0.0697 0.451 CD8_CTL L2
ENSG00000112303 VNN2 569788 sc-eQTL 3.04e-01 0.0831 0.0805 0.451 CD8_CTL L2
ENSG00000112306 RPS12 518678 sc-eQTL 4.50e-01 0.0327 0.0432 0.451 CD8_CTL L2
ENSG00000118515 SGK1 -984865 sc-eQTL 1.35e-01 -0.109 0.0726 0.451 CD8_CTL L2
ENSG00000146409 SLC18B1 519908 sc-eQTL 9.10e-02 0.141 0.0832 0.451 CD8_CTL L2
ENSG00000028839 TBPL1 -618923 sc-eQTL 5.26e-01 -0.0517 0.0813 0.451 CD8_Naive L2
ENSG00000079950 STX7 820049 sc-eQTL 1.08e-01 0.139 0.0862 0.451 CD8_Naive L2
ENSG00000112303 VNN2 569788 sc-eQTL 1.49e-01 0.108 0.0745 0.451 CD8_Naive L2
ENSG00000112306 RPS12 518678 sc-eQTL 8.56e-01 -0.00781 0.0428 0.451 CD8_Naive L2
ENSG00000118515 SGK1 -984865 sc-eQTL 1.09e-01 -0.0861 0.0534 0.451 CD8_Naive L2
ENSG00000146409 SLC18B1 519908 sc-eQTL 7.60e-01 0.0263 0.0859 0.451 CD8_Naive L2
ENSG00000028839 TBPL1 -618923 sc-eQTL 7.31e-01 -0.0319 0.0928 0.463 CD8_TCM L2
ENSG00000079950 STX7 820049 sc-eQTL 6.17e-01 0.043 0.0859 0.463 CD8_TCM L2
ENSG00000112303 VNN2 569788 sc-eQTL 7.86e-01 -0.0232 0.0853 0.463 CD8_TCM L2
ENSG00000112306 RPS12 518678 sc-eQTL 2.43e-01 -0.0485 0.0414 0.463 CD8_TCM L2
ENSG00000118515 SGK1 -984865 sc-eQTL 1.06e-01 -0.111 0.0684 0.463 CD8_TCM L2
ENSG00000146409 SLC18B1 519908 sc-eQTL 2.89e-01 0.0965 0.0908 0.463 CD8_TCM L2
ENSG00000028839 TBPL1 -618923 sc-eQTL 2.36e-01 -0.0994 0.0836 0.445 CD8_TEM L2
ENSG00000079950 STX7 820049 sc-eQTL 5.96e-01 -0.0486 0.0916 0.445 CD8_TEM L2
ENSG00000112303 VNN2 569788 sc-eQTL 1.37e-01 -0.135 0.0906 0.445 CD8_TEM L2
ENSG00000112306 RPS12 518678 sc-eQTL 5.25e-01 -0.0312 0.049 0.445 CD8_TEM L2
ENSG00000118515 SGK1 -984865 sc-eQTL 5.13e-01 0.0525 0.0802 0.445 CD8_TEM L2
ENSG00000146409 SLC18B1 519908 sc-eQTL 6.33e-01 -0.0443 0.0926 0.445 CD8_TEM L2
ENSG00000028839 TBPL1 -618923 sc-eQTL 9.66e-01 -0.00376 0.0871 0.452 MAIT L2
ENSG00000079950 STX7 820049 sc-eQTL 7.71e-01 -0.0242 0.0827 0.452 MAIT L2
ENSG00000112303 VNN2 569788 sc-eQTL 8.36e-01 0.0175 0.0841 0.452 MAIT L2
ENSG00000112306 RPS12 518678 sc-eQTL 8.41e-01 -0.00829 0.0414 0.452 MAIT L2
ENSG00000118515 SGK1 -984865 sc-eQTL 7.48e-01 -0.0187 0.0582 0.452 MAIT L2
ENSG00000146409 SLC18B1 519908 sc-eQTL 6.66e-01 -0.0375 0.0867 0.452 MAIT L2
ENSG00000028839 TBPL1 -618923 sc-eQTL 5.51e-01 0.0552 0.0924 0.449 NK_CD56bright L2
ENSG00000079950 STX7 820049 sc-eQTL 9.97e-01 0.000357 0.0857 0.449 NK_CD56bright L2
ENSG00000112303 VNN2 569788 sc-eQTL 7.39e-01 0.029 0.087 0.449 NK_CD56bright L2
ENSG00000112306 RPS12 518678 sc-eQTL 1.91e-01 0.0633 0.0483 0.449 NK_CD56bright L2
ENSG00000118515 SGK1 -984865 sc-eQTL 7.61e-01 -0.0221 0.0725 0.449 NK_CD56bright L2
ENSG00000028839 TBPL1 -618923 sc-eQTL 2.57e-02 -0.167 0.0743 0.45 NK_CD56dim L2
ENSG00000079950 STX7 820049 sc-eQTL 3.75e-01 0.0612 0.0687 0.45 NK_CD56dim L2
ENSG00000112303 VNN2 569788 sc-eQTL 2.64e-01 0.0962 0.0859 0.45 NK_CD56dim L2
ENSG00000112306 RPS12 518678 sc-eQTL 6.28e-01 0.0166 0.0342 0.45 NK_CD56dim L2
ENSG00000118515 SGK1 -984865 sc-eQTL 3.59e-01 0.0695 0.0756 0.45 NK_CD56dim L2
ENSG00000028839 TBPL1 -618923 sc-eQTL 9.33e-01 -0.00792 0.0945 0.445 NK_HLA L2
ENSG00000079950 STX7 820049 sc-eQTL 5.79e-02 0.163 0.0852 0.445 NK_HLA L2
ENSG00000112303 VNN2 569788 sc-eQTL 4.64e-01 -0.0638 0.087 0.445 NK_HLA L2
ENSG00000112306 RPS12 518678 sc-eQTL 5.08e-01 0.0269 0.0405 0.445 NK_HLA L2
ENSG00000118515 SGK1 -984865 sc-eQTL 5.28e-01 0.0507 0.0801 0.445 NK_HLA L2
ENSG00000028839 TBPL1 -618923 sc-eQTL 1.06e-01 -0.126 0.0777 0.45 NK_cytokine L2
ENSG00000079950 STX7 820049 sc-eQTL 7.04e-01 -0.0288 0.0757 0.45 NK_cytokine L2
ENSG00000112303 VNN2 569788 sc-eQTL 9.81e-01 0.00205 0.0851 0.45 NK_cytokine L2
ENSG00000112306 RPS12 518678 sc-eQTL 6.45e-01 0.0213 0.0462 0.45 NK_cytokine L2
ENSG00000118515 SGK1 -984865 sc-eQTL 8.41e-01 0.0155 0.0769 0.45 NK_cytokine L2
ENSG00000028839 TBPL1 -618923 sc-eQTL 4.65e-01 -0.0787 0.107 0.437 PB L2
ENSG00000079931 MOXD1 931772 sc-eQTL 9.28e-01 0.00837 0.0918 0.437 PB L2
ENSG00000079950 STX7 820049 sc-eQTL 5.74e-02 0.145 0.0754 0.437 PB L2
ENSG00000112303 VNN2 569788 sc-eQTL 3.83e-01 0.0817 0.0933 0.437 PB L2
ENSG00000112306 RPS12 518678 sc-eQTL 6.73e-01 -0.0225 0.0531 0.437 PB L2
ENSG00000118515 SGK1 -984865 sc-eQTL 2.04e-01 -0.109 0.0852 0.437 PB L2
ENSG00000146409 SLC18B1 519908 sc-eQTL 6.88e-01 0.04 0.0995 0.437 PB L2
ENSG00000028839 TBPL1 -618923 sc-eQTL 9.67e-01 -0.0037 0.0889 0.45 Pro_T L2
ENSG00000079950 STX7 820049 sc-eQTL 1.75e-01 0.108 0.079 0.45 Pro_T L2
ENSG00000112303 VNN2 569788 sc-eQTL 7.43e-01 0.0279 0.0851 0.45 Pro_T L2
ENSG00000112306 RPS12 518678 sc-eQTL 7.58e-01 0.00995 0.0322 0.45 Pro_T L2
ENSG00000118515 SGK1 -984865 sc-eQTL 5.01e-01 -0.0435 0.0645 0.45 Pro_T L2
ENSG00000146409 SLC18B1 519908 sc-eQTL 9.22e-01 -0.00812 0.0833 0.45 Pro_T L2
ENSG00000028839 TBPL1 -618923 sc-eQTL 8.76e-01 -0.014 0.0896 0.451 Treg L2
ENSG00000079950 STX7 820049 sc-eQTL 3.23e-02 -0.18 0.0836 0.451 Treg L2
ENSG00000112303 VNN2 569788 sc-eQTL 8.11e-01 -0.017 0.0711 0.451 Treg L2
ENSG00000112306 RPS12 518678 sc-eQTL 9.11e-01 0.00351 0.0314 0.451 Treg L2
ENSG00000118515 SGK1 -984865 sc-eQTL 4.09e-01 -0.0547 0.0661 0.451 Treg L2
ENSG00000146409 SLC18B1 519908 sc-eQTL 9.84e-02 -0.146 0.0882 0.451 Treg L2
ENSG00000028839 TBPL1 -618923 sc-eQTL 2.69e-01 0.103 0.0924 0.446 cDC L2
ENSG00000079950 STX7 820049 sc-eQTL 8.86e-01 0.0104 0.0728 0.446 cDC L2
ENSG00000093134 VNN3 598482 sc-eQTL 4.08e-02 0.147 0.0715 0.446 cDC L2
ENSG00000112299 VNN1 619192 sc-eQTL 6.52e-01 -0.0383 0.085 0.446 cDC L2
ENSG00000112303 VNN2 569788 sc-eQTL 3.88e-01 0.0715 0.0827 0.446 cDC L2
ENSG00000112306 RPS12 518678 sc-eQTL 1.26e-01 0.0625 0.0406 0.446 cDC L2
ENSG00000118515 SGK1 -984865 sc-eQTL 5.50e-01 -0.0412 0.0688 0.446 cDC L2
ENSG00000146409 SLC18B1 519908 sc-eQTL 9.76e-01 -0.00247 0.081 0.446 cDC L2
ENSG00000286438 AL591115.1 230119 sc-eQTL 1.87e-01 0.0854 0.0644 0.446 cDC L2
ENSG00000286887 AL355881.1 -963054 sc-eQTL 1.50e-01 -0.115 0.0792 0.446 cDC L2
ENSG00000028839 TBPL1 -618923 sc-eQTL 1.48e-01 -0.105 0.0725 0.451 cMono_IL1B L2
ENSG00000079950 STX7 820049 sc-eQTL 8.13e-01 -0.0131 0.0552 0.451 cMono_IL1B L2
ENSG00000093134 VNN3 598482 sc-eQTL 5.66e-01 0.0449 0.078 0.451 cMono_IL1B L2
ENSG00000112299 VNN1 619192 sc-eQTL 6.36e-01 -0.0373 0.0787 0.451 cMono_IL1B L2
ENSG00000112303 VNN2 569788 sc-eQTL 9.17e-02 0.106 0.0626 0.451 cMono_IL1B L2
ENSG00000112306 RPS12 518678 sc-eQTL 5.76e-01 -0.0196 0.035 0.451 cMono_IL1B L2
ENSG00000118515 SGK1 -984865 sc-eQTL 8.48e-01 0.01 0.0522 0.451 cMono_IL1B L2
ENSG00000146409 SLC18B1 519908 sc-eQTL 3.72e-01 -0.0602 0.0674 0.451 cMono_IL1B L2
ENSG00000286887 AL355881.1 -963054 sc-eQTL 5.97e-01 -0.0372 0.0702 0.451 cMono_IL1B L2
ENSG00000028839 TBPL1 -618923 sc-eQTL 3.23e-01 -0.0819 0.0827 0.451 cMono_S100A L2
ENSG00000079950 STX7 820049 sc-eQTL 2.22e-01 -0.073 0.0597 0.451 cMono_S100A L2
ENSG00000093134 VNN3 598482 sc-eQTL 6.73e-01 -0.0316 0.0748 0.451 cMono_S100A L2
ENSG00000112299 VNN1 619192 sc-eQTL 1.67e-01 -0.112 0.0809 0.451 cMono_S100A L2
ENSG00000112303 VNN2 569788 sc-eQTL 3.81e-02 0.11 0.0527 0.451 cMono_S100A L2
ENSG00000112306 RPS12 518678 sc-eQTL 4.06e-01 -0.0318 0.0382 0.451 cMono_S100A L2
ENSG00000118515 SGK1 -984865 sc-eQTL 5.22e-01 -0.0281 0.0438 0.451 cMono_S100A L2
ENSG00000146409 SLC18B1 519908 sc-eQTL 4.16e-01 0.0577 0.0708 0.451 cMono_S100A L2
ENSG00000286887 AL355881.1 -963054 sc-eQTL 5.36e-01 0.043 0.0693 0.451 cMono_S100A L2
ENSG00000028839 TBPL1 -618923 sc-eQTL 5.94e-01 0.0616 0.115 0.442 gdT L2
ENSG00000079950 STX7 820049 sc-eQTL 7.15e-01 0.0362 0.0991 0.442 gdT L2
ENSG00000112303 VNN2 569788 sc-eQTL 3.48e-01 -0.103 0.109 0.442 gdT L2
ENSG00000112306 RPS12 518678 sc-eQTL 9.31e-01 0.00361 0.0418 0.442 gdT L2
ENSG00000118515 SGK1 -984865 sc-eQTL 4.89e-01 -0.0546 0.0787 0.442 gdT L2
ENSG00000146409 SLC18B1 519908 sc-eQTL 5.66e-01 0.062 0.108 0.442 gdT L2
ENSG00000028839 TBPL1 -618923 sc-eQTL 1.81e-01 -0.112 0.0837 0.453 intMono L2
ENSG00000079950 STX7 820049 sc-eQTL 7.09e-01 -0.03 0.0803 0.453 intMono L2
ENSG00000093134 VNN3 598482 sc-eQTL 4.26e-02 0.164 0.0802 0.453 intMono L2
ENSG00000112299 VNN1 619192 sc-eQTL 4.12e-01 -0.0658 0.08 0.453 intMono L2
ENSG00000112303 VNN2 569788 sc-eQTL 7.87e-01 -0.0221 0.0814 0.453 intMono L2
ENSG00000112306 RPS12 518678 sc-eQTL 8.88e-01 0.00502 0.0354 0.453 intMono L2
ENSG00000118515 SGK1 -984865 sc-eQTL 6.98e-01 0.0232 0.0595 0.453 intMono L2
ENSG00000146409 SLC18B1 519908 sc-eQTL 9.20e-01 -0.00869 0.0863 0.453 intMono L2
ENSG00000286887 AL355881.1 -963054 sc-eQTL 2.04e-01 -0.105 0.0822 0.453 intMono L2
ENSG00000028839 TBPL1 -618923 sc-eQTL 2.29e-01 -0.108 0.0895 0.452 ncMono L2
ENSG00000079950 STX7 820049 sc-eQTL 4.74e-01 0.0435 0.0606 0.452 ncMono L2
ENSG00000093134 VNN3 598482 sc-eQTL 1.09e-01 0.137 0.0851 0.452 ncMono L2
ENSG00000112299 VNN1 619192 sc-eQTL 5.12e-01 -0.0559 0.085 0.452 ncMono L2
ENSG00000112303 VNN2 569788 sc-eQTL 4.05e-01 0.0681 0.0816 0.452 ncMono L2
ENSG00000112306 RPS12 518678 sc-eQTL 8.51e-01 0.00773 0.041 0.452 ncMono L2
ENSG00000118515 SGK1 -984865 sc-eQTL 9.81e-01 0.0014 0.058 0.452 ncMono L2
ENSG00000146409 SLC18B1 519908 sc-eQTL 3.16e-01 0.0726 0.0723 0.452 ncMono L2
ENSG00000286887 AL355881.1 -963054 sc-eQTL 8.68e-01 0.0127 0.0766 0.452 ncMono L2
ENSG00000028839 TBPL1 -618923 sc-eQTL 9.72e-01 0.00375 0.107 0.444 pDC L2
ENSG00000079950 STX7 820049 sc-eQTL 3.69e-01 0.0639 0.0709 0.444 pDC L2
ENSG00000093134 VNN3 598482 sc-eQTL 5.49e-01 0.0429 0.0714 0.444 pDC L2
ENSG00000112299 VNN1 619192 sc-eQTL 6.51e-01 -0.033 0.0727 0.444 pDC L2
ENSG00000112303 VNN2 569788 sc-eQTL 3.00e-01 0.0898 0.0864 0.444 pDC L2
ENSG00000112306 RPS12 518678 sc-eQTL 2.21e-01 0.0729 0.0594 0.444 pDC L2
ENSG00000118515 SGK1 -984865 sc-eQTL 6.55e-01 0.0271 0.0606 0.444 pDC L2
ENSG00000146409 SLC18B1 519908 sc-eQTL 5.84e-01 0.0484 0.0883 0.444 pDC L2
ENSG00000286438 AL591115.1 230119 sc-eQTL 3.09e-01 0.086 0.0843 0.444 pDC L2
ENSG00000286887 AL355881.1 -963054 sc-eQTL 8.65e-01 -0.0128 0.075 0.444 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -618923 sc-eQTL 6.57e-01 -0.0394 0.0885 0.451 B_Memory LOneK1K
ENSG00000079931 MOXD1 931772 sc-eQTL 4.68e-01 0.0624 0.0859 0.451 B_Memory LOneK1K
ENSG00000079950 STX7 820049 sc-eQTL 9.28e-01 0.00438 0.0487 0.451 B_Memory LOneK1K
ENSG00000112303 VNN2 569788 sc-eQTL 9.34e-01 0.00642 0.0771 0.451 B_Memory LOneK1K
ENSG00000112306 RPS12 518678 sc-eQTL 8.83e-01 -0.00648 0.0439 0.451 B_Memory LOneK1K
ENSG00000118515 SGK1 -984865 sc-eQTL 6.71e-03 -0.185 0.0675 0.451 B_Memory LOneK1K
ENSG00000146409 SLC18B1 519908 sc-eQTL 9.42e-01 -0.00591 0.0806 0.451 B_Memory LOneK1K
ENSG00000028839 TBPL1 -618923 sc-eQTL 2.95e-01 0.0861 0.082 0.451 B_Naive LOneK1K
ENSG00000079931 MOXD1 931772 sc-eQTL 4.71e-01 0.065 0.0901 0.451 B_Naive LOneK1K
ENSG00000079950 STX7 820049 sc-eQTL 9.46e-01 0.00249 0.037 0.451 B_Naive LOneK1K
ENSG00000112303 VNN2 569788 sc-eQTL 9.83e-01 0.00153 0.0719 0.451 B_Naive LOneK1K
ENSG00000112306 RPS12 518678 sc-eQTL 6.21e-01 -0.0215 0.0435 0.451 B_Naive LOneK1K
ENSG00000118515 SGK1 -984865 sc-eQTL 1.31e-01 -0.101 0.067 0.451 B_Naive LOneK1K
ENSG00000146409 SLC18B1 519908 sc-eQTL 4.70e-01 0.0593 0.0819 0.451 B_Naive LOneK1K
ENSG00000028839 TBPL1 -618923 sc-eQTL 8.22e-02 -0.115 0.0657 0.451 CD14_Mono LOneK1K
ENSG00000079950 STX7 820049 sc-eQTL 3.01e-01 -0.0477 0.0459 0.451 CD14_Mono LOneK1K
ENSG00000093134 VNN3 598482 sc-eQTL 6.82e-01 0.0307 0.075 0.451 CD14_Mono LOneK1K
ENSG00000112299 VNN1 619192 sc-eQTL 2.83e-01 -0.0841 0.0781 0.451 CD14_Mono LOneK1K
ENSG00000112303 VNN2 569788 sc-eQTL 5.12e-02 0.101 0.0513 0.451 CD14_Mono LOneK1K
ENSG00000112306 RPS12 518678 sc-eQTL 6.90e-01 -0.0142 0.0355 0.451 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -984865 sc-eQTL 9.44e-01 -0.00339 0.0484 0.451 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 519908 sc-eQTL 7.54e-01 -0.0198 0.0631 0.451 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -963054 sc-eQTL 9.96e-01 -0.000353 0.0662 0.451 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -618923 sc-eQTL 1.54e-01 -0.123 0.086 0.45 CD16_Mono LOneK1K
ENSG00000079950 STX7 820049 sc-eQTL 7.64e-01 0.0171 0.057 0.45 CD16_Mono LOneK1K
ENSG00000093134 VNN3 598482 sc-eQTL 3.16e-03 0.245 0.0821 0.45 CD16_Mono LOneK1K
ENSG00000112299 VNN1 619192 sc-eQTL 9.65e-01 -0.00365 0.0831 0.45 CD16_Mono LOneK1K
ENSG00000112303 VNN2 569788 sc-eQTL 3.71e-01 0.0701 0.0782 0.45 CD16_Mono LOneK1K
ENSG00000112306 RPS12 518678 sc-eQTL 5.70e-01 -0.0189 0.0332 0.45 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -984865 sc-eQTL 7.95e-01 0.0131 0.0503 0.45 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 519908 sc-eQTL 6.19e-01 0.0402 0.0806 0.45 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -963054 sc-eQTL 7.58e-02 -0.129 0.0724 0.45 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -618923 sc-eQTL 1.58e-02 -0.166 0.0683 0.45 NK_CD56dim LOneK1K
ENSG00000079950 STX7 820049 sc-eQTL 4.25e-01 0.0519 0.0649 0.45 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 569788 sc-eQTL 3.63e-01 0.0749 0.0822 0.45 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 518678 sc-eQTL 7.48e-01 0.0108 0.0336 0.45 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -984865 sc-eQTL 6.02e-01 0.0362 0.0694 0.45 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000112299 VNN1 619192 pQTL 0.00315 -0.105 0.0354 0.0 0.0 0.411

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina